{"id":"https://openalex.org/W4412838315","doi":"https://doi.org/10.1093/bib/bbaf366","title":"NeuroFANN: identification of neuropathological subtypes in dementia with plasma proteins by using functionally annotated neural network","display_name":"NeuroFANN: identification of neuropathological subtypes in dementia with plasma proteins by using functionally annotated neural network","publication_year":2025,"publication_date":"2025-07-01","ids":{"openalex":"https://openalex.org/W4412838315","doi":"https://doi.org/10.1093/bib/bbaf366","pmid":"https://pubmed.ncbi.nlm.nih.gov/40748327"},"language":"en","primary_location":{"id":"doi:10.1093/bib/bbaf366","is_oa":true,"landing_page_url":"https://doi.org/10.1093/bib/bbaf366","pdf_url":"https://academic.oup.com/bib/article-pdf/26/4/bbaf366/63919093/bbaf366.pdf","source":{"id":"https://openalex.org/S91767247","display_name":"Briefings in Bioinformatics","issn_l":"1467-5463","issn":["1467-5463","1477-4054"],"is_oa":true,"is_in_doaj":true,"is_core":true,"host_organization":"https://openalex.org/P4310311648","host_organization_name":"Oxford University Press","host_organization_lineage":["https://openalex.org/P4310311648","https://openalex.org/P4310311647"],"host_organization_lineage_names":["Oxford University Press","University of Oxford"],"type":"journal"},"license":"cc-by","license_id":"https://openalex.org/licenses/cc-by","version":"publishedVersion","is_accepted":true,"is_published":true,"raw_source_name":"Briefings in Bioinformatics","raw_type":"journal-article"},"type":"article","indexed_in":["crossref","doaj","pubmed"],"open_access":{"is_oa":true,"oa_status":"gold","oa_url":"https://academic.oup.com/bib/article-pdf/26/4/bbaf366/63919093/bbaf366.pdf","any_repository_has_fulltext":true},"authorships":[{"author_position":"first","author":{"id":"https://openalex.org/A5065842376","display_name":"Sunghong Park","orcid":"https://orcid.org/0000-0002-5158-4670"},"institutions":[{"id":"https://openalex.org/I57664883","display_name":"Ajou University","ror":"https://ror.org/03tzb2h73","country_code":"KR","type":"education","lineage":["https://openalex.org/I57664883"]}],"countries":["KR"],"is_corresponding":false,"raw_author_name":"Sunghong Park","raw_affiliation_strings":["Department of Physiology, Ajou University School of Medicine , Worldcup-ro 164, Yeongtong-gu, Suwon, 16499 ,"],"raw_orcid":"https://orcid.org/0000-0002-5158-4670","affiliations":[{"raw_affiliation_string":"Department of Physiology, Ajou University School of Medicine , Worldcup-ro 164, Yeongtong-gu, Suwon, 16499 ,","institution_ids":["https://openalex.org/I57664883"]}]},{"author_position":"middle","author":{"id":"https://openalex.org/A5102964634","display_name":"Do Yoon Kim","orcid":"https://orcid.org/0000-0002-9934-5484"},"institutions":[{"id":"https://openalex.org/I57664883","display_name":"Ajou University","ror":"https://ror.org/03tzb2h73","country_code":"KR","type":"education","lineage":["https://openalex.org/I57664883"]}],"countries":["KR"],"is_corresponding":false,"raw_author_name":"Doyoon Kim","raw_affiliation_strings":["Department of Physiology, Ajou University School of Medicine , Worldcup-ro 164, Yeongtong-gu, Suwon, 16499 ,"],"raw_orcid":null,"affiliations":[{"raw_affiliation_string":"Department of Physiology, Ajou University School of Medicine , Worldcup-ro 164, Yeongtong-gu, Suwon, 16499 ,","institution_ids":["https://openalex.org/I57664883"]}]},{"author_position":"middle","author":{"id":"https://openalex.org/A5101504501","display_name":"Ji Hye Choi","orcid":"https://orcid.org/0000-0002-0914-2174"},"institutions":[{"id":"https://openalex.org/I57664883","display_name":"Ajou University","ror":"https://ror.org/03tzb2h73","country_code":"KR","type":"education","lineage":["https://openalex.org/I57664883"]}],"countries":["KR"],"is_corresponding":false,"raw_author_name":"Ji-Hye Choi","raw_affiliation_strings":["Department of Physiology, Ajou University School of Medicine , Worldcup-ro 164, Yeongtong-gu, Suwon, 16499 ,"],"raw_orcid":null,"affiliations":[{"raw_affiliation_string":"Department of Physiology, Ajou University School of Medicine , Worldcup-ro 164, Yeongtong-gu, Suwon, 16499 ,","institution_ids":["https://openalex.org/I57664883"]}]},{"author_position":"middle","author":{"id":"https://openalex.org/A5029038125","display_name":"Chang Hyung Hong","orcid":"https://orcid.org/0000-0003-3258-7611"},"institutions":[{"id":"https://openalex.org/I57664883","display_name":"Ajou University","ror":"https://ror.org/03tzb2h73","country_code":"KR","type":"education","lineage":["https://openalex.org/I57664883"]}],"countries":["KR"],"is_corresponding":false,"raw_author_name":"Chang Hyung Hong","raw_affiliation_strings":["Department of Psychiatry, Ajou University School of Medicine , Worldcup-ro 164, Yeongtong-gu, Suwon, 16499 ,"],"raw_orcid":null,"affiliations":[{"raw_affiliation_string":"Department of Psychiatry, Ajou University School of Medicine , Worldcup-ro 164, Yeongtong-gu, Suwon, 16499 ,","institution_ids":["https://openalex.org/I57664883"]}]},{"author_position":"middle","author":{"id":"https://openalex.org/A5035456076","display_name":"Sang Joon Son","orcid":"https://orcid.org/0000-0001-7434-7996"},"institutions":[{"id":"https://openalex.org/I57664883","display_name":"Ajou University","ror":"https://ror.org/03tzb2h73","country_code":"KR","type":"education","lineage":["https://openalex.org/I57664883"]}],"countries":["KR"],"is_corresponding":false,"raw_author_name":"Sang Joon Son","raw_affiliation_strings":["Department of Psychiatry, Ajou University School of Medicine , Worldcup-ro 164, Yeongtong-gu, Suwon, 16499 ,"],"raw_orcid":null,"affiliations":[{"raw_affiliation_string":"Department of Psychiatry, Ajou University School of Medicine , Worldcup-ro 164, Yeongtong-gu, Suwon, 16499 ,","institution_ids":["https://openalex.org/I57664883"]}]},{"author_position":"middle","author":{"id":"https://openalex.org/A5000314654","display_name":"Hyun Woong Roh","orcid":"https://orcid.org/0000-0002-1333-358X"},"institutions":[{"id":"https://openalex.org/I57664883","display_name":"Ajou University","ror":"https://ror.org/03tzb2h73","country_code":"KR","type":"education","lineage":["https://openalex.org/I57664883"]}],"countries":["KR"],"is_corresponding":false,"raw_author_name":"Hyun Woong Roh","raw_affiliation_strings":["Department of Psychiatry, Ajou University School of Medicine , Worldcup-ro 164, Yeongtong-gu, Suwon, 16499 ,"],"raw_orcid":null,"affiliations":[{"raw_affiliation_string":"Department of Psychiatry, Ajou University School of Medicine , Worldcup-ro 164, Yeongtong-gu, Suwon, 16499 ,","institution_ids":["https://openalex.org/I57664883"]}]},{"author_position":"middle","author":{"id":"https://openalex.org/A5043830800","display_name":"Hyunjung Shin","orcid":"https://orcid.org/0000-0001-8347-8277"},"institutions":[{"id":"https://openalex.org/I57664883","display_name":"Ajou University","ror":"https://ror.org/03tzb2h73","country_code":"KR","type":"education","lineage":["https://openalex.org/I57664883"]}],"countries":["KR"],"is_corresponding":false,"raw_author_name":"Hyunjung Shin","raw_affiliation_strings":["Department of Artificial Intelligence, Ajou University , Worldcup-ro 206, Yeongtong-gu, Suwon, 16499 ,","Department of Industrial Engineering, Ajou University , Worldcup-ro 206, Yeongtong-gu, Suwon, 16499 ,"],"raw_orcid":"https://orcid.org/0000-0001-8347-8277","affiliations":[{"raw_affiliation_string":"Department of Artificial Intelligence, Ajou University , Worldcup-ro 206, Yeongtong-gu, Suwon, 16499 ,","institution_ids":["https://openalex.org/I57664883"]},{"raw_affiliation_string":"Department of Industrial Engineering, Ajou University , Worldcup-ro 206, Yeongtong-gu, Suwon, 16499 ,","institution_ids":["https://openalex.org/I57664883"]}]},{"author_position":"last","author":{"id":"https://openalex.org/A5070772179","display_name":"Hyun Goo Woo","orcid":"https://orcid.org/0000-0002-0916-893X"},"institutions":[{"id":"https://openalex.org/I57664883","display_name":"Ajou University","ror":"https://ror.org/03tzb2h73","country_code":"KR","type":"education","lineage":["https://openalex.org/I57664883"]}],"countries":["KR"],"is_corresponding":false,"raw_author_name":"Hyun Goo Woo","raw_affiliation_strings":["Ajou Translational Omics Center, Research Institute for Innovative Medicine, Ajou University Medical Center , Worldcup-ro 164, Yeongtong-gu, Suwon, 16499 ,","Department of Biomedical Science, Graduate School of Ajou University , Worldcup-ro 164, Yeongtong-gu, Suwon, 16499 ,","Department of Physiology, Ajou University School of Medicine , Worldcup-ro 164, Yeongtong-gu, Suwon, 16499 ,"],"raw_orcid":"https://orcid.org/0000-0002-0916-893X","affiliations":[{"raw_affiliation_string":"Ajou Translational Omics Center, Research Institute for Innovative Medicine, Ajou University Medical Center , Worldcup-ro 164, Yeongtong-gu, Suwon, 16499 ,","institution_ids":["https://openalex.org/I57664883"]},{"raw_affiliation_string":"Department of Biomedical Science, Graduate School of Ajou University , Worldcup-ro 164, Yeongtong-gu, Suwon, 16499 ,","institution_ids":["https://openalex.org/I57664883"]},{"raw_affiliation_string":"Department of Physiology, Ajou University School of Medicine , Worldcup-ro 164, Yeongtong-gu, Suwon, 16499 ,","institution_ids":["https://openalex.org/I57664883"]}]}],"institutions":[],"countries_distinct_count":1,"institutions_distinct_count":8,"corresponding_author_ids":[],"corresponding_institution_ids":[],"apc_list":{"value":4011,"currency":"USD","value_usd":4011},"apc_paid":{"value":4011,"currency":"USD","value_usd":4011},"fwci":0.0,"has_fulltext":true,"cited_by_count":0,"citation_normalized_percentile":{"value":0.2248022,"is_in_top_1_percent":false,"is_in_top_10_percent":false},"cited_by_percentile_year":null,"biblio":{"volume":"26","issue":"4","first_page":null,"last_page":null},"is_retracted":false,"is_paratext":false,"is_xpac":false,"primary_topic":{"id":"https://openalex.org/T10086","display_name":"Alzheimer's disease research and treatments","score":0.9958000183105469,"subfield":{"id":"https://openalex.org/subfields/2737","display_name":"Physiology"},"field":{"id":"https://openalex.org/fields/27","display_name":"Medicine"},"domain":{"id":"https://openalex.org/domains/4","display_name":"Health Sciences"}},"topics":[{"id":"https://openalex.org/T10086","display_name":"Alzheimer's disease research and treatments","score":0.9958000183105469,"subfield":{"id":"https://openalex.org/subfields/2737","display_name":"Physiology"},"field":{"id":"https://openalex.org/fields/27","display_name":"Medicine"},"domain":{"id":"https://openalex.org/domains/4","display_name":"Health Sciences"}},{"id":"https://openalex.org/T10009","display_name":"Dementia and Cognitive Impairment Research","score":0.9822999835014343,"subfield":{"id":"https://openalex.org/subfields/2738","display_name":"Psychiatry and Mental health"},"field":{"id":"https://openalex.org/fields/27","display_name":"Medicine"},"domain":{"id":"https://openalex.org/domains/4","display_name":"Health Sciences"}},{"id":"https://openalex.org/T11710","display_name":"Biomedical Text Mining and Ontologies","score":0.9775999784469604,"subfield":{"id":"https://openalex.org/subfields/1312","display_name":"Molecular Biology"},"field":{"id":"https://openalex.org/fields/13","display_name":"Biochemistry, Genetics and Molecular Biology"},"domain":{"id":"https://openalex.org/domains/1","display_name":"Life Sciences"}}],"keywords":[{"id":"https://openalex.org/keywords/dementia","display_name":"Dementia","score":0.7914174199104309},{"id":"https://openalex.org/keywords/biomarker","display_name":"Biomarker","score":0.5036618113517761},{"id":"https://openalex.org/keywords/computational-biology","display_name":"Computational biology","score":0.4227864444255829},{"id":"https://openalex.org/keywords/disease","display_name":"Disease","score":0.4194962978363037},{"id":"https://openalex.org/keywords/bioinformatics","display_name":"Bioinformatics","score":0.3990596532821655},{"id":"https://openalex.org/keywords/medicine","display_name":"Medicine","score":0.38536518812179565},{"id":"https://openalex.org/keywords/neuroscience","display_name":"Neuroscience","score":0.3319958448410034},{"id":"https://openalex.org/keywords/biology","display_name":"Biology","score":0.313504159450531},{"id":"https://openalex.org/keywords/pathology","display_name":"Pathology","score":0.28724777698516846},{"id":"https://openalex.org/keywords/biochemistry","display_name":"Biochemistry","score":0.09494262933731079}],"concepts":[{"id":"https://openalex.org/C2779483572","wikidata":"https://www.wikidata.org/wiki/Q83030","display_name":"Dementia","level":3,"score":0.7914174199104309},{"id":"https://openalex.org/C2781197716","wikidata":"https://www.wikidata.org/wiki/Q864574","display_name":"Biomarker","level":2,"score":0.5036618113517761},{"id":"https://openalex.org/C70721500","wikidata":"https://www.wikidata.org/wiki/Q177005","display_name":"Computational biology","level":1,"score":0.4227864444255829},{"id":"https://openalex.org/C2779134260","wikidata":"https://www.wikidata.org/wiki/Q12136","display_name":"Disease","level":2,"score":0.4194962978363037},{"id":"https://openalex.org/C60644358","wikidata":"https://www.wikidata.org/wiki/Q128570","display_name":"Bioinformatics","level":1,"score":0.3990596532821655},{"id":"https://openalex.org/C71924100","wikidata":"https://www.wikidata.org/wiki/Q11190","display_name":"Medicine","level":0,"score":0.38536518812179565},{"id":"https://openalex.org/C169760540","wikidata":"https://www.wikidata.org/wiki/Q207011","display_name":"Neuroscience","level":1,"score":0.3319958448410034},{"id":"https://openalex.org/C86803240","wikidata":"https://www.wikidata.org/wiki/Q420","display_name":"Biology","level":0,"score":0.313504159450531},{"id":"https://openalex.org/C142724271","wikidata":"https://www.wikidata.org/wiki/Q7208","display_name":"Pathology","level":1,"score":0.28724777698516846},{"id":"https://openalex.org/C55493867","wikidata":"https://www.wikidata.org/wiki/Q7094","display_name":"Biochemistry","level":1,"score":0.09494262933731079}],"mesh":[{"descriptor_ui":"D000069550","descriptor_name":"Machine Learning","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D000069550","descriptor_name":"Machine Learning","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D000069550","descriptor_name":"Machine Learning","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D000069550","descriptor_name":"Machine Learning","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D000368","descriptor_name":"Aged","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D000368","descriptor_name":"Aged","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D000368","descriptor_name":"Aged","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D000368","descriptor_name":"Aged","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D001798","descriptor_name":"Blood Proteins","qualifier_ui":"Q000378","qualifier_name":"metabolism","is_major_topic":true},{"descriptor_ui":"D001798","descriptor_name":"Blood Proteins","qualifier_ui":"Q000378","qualifier_name":"metabolism","is_major_topic":true},{"descriptor_ui":"D001798","descriptor_name":"Blood Proteins","qualifier_ui":"Q000378","qualifier_name":"metabolism","is_major_topic":true},{"descriptor_ui":"D001798","descriptor_name":"Blood Proteins","qualifier_ui":"Q000378","qualifier_name":"metabolism","is_major_topic":true},{"descriptor_ui":"D003704","descriptor_name":"Dementia","qualifier_ui":"Q000097","qualifier_name":"blood","is_major_topic":true},{"descriptor_ui":"D003704","descriptor_name":"Dementia","qualifier_ui":"Q000097","qualifier_name":"blood","is_major_topic":true},{"descriptor_ui":"D003704","descriptor_name":"Dementia","qualifier_ui":"Q000097","qualifier_name":"blood","is_major_topic":true},{"descriptor_ui":"D003704","descriptor_name":"Dementia","qualifier_ui":"Q000097","qualifier_name":"blood","is_major_topic":true},{"descriptor_ui":"D003704","descriptor_name":"Dementia","qualifier_ui":"Q000145","qualifier_name":"classification","is_major_topic":true},{"descriptor_ui":"D003704","descriptor_name":"Dementia","qualifier_ui":"Q000145","qualifier_name":"classification","is_major_topic":true},{"descriptor_ui":"D003704","descriptor_name":"Dementia","qualifier_ui":"Q000145","qualifier_name":"classification","is_major_topic":true},{"descriptor_ui":"D003704","descriptor_name":"Dementia","qualifier_ui":"Q000145","qualifier_name":"classification","is_major_topic":true},{"descriptor_ui":"D003704","descriptor_name":"Dementia","qualifier_ui":"Q000175","qualifier_name":"diagnosis","is_major_topic":true},{"descriptor_ui":"D003704","descriptor_name":"Dementia","qualifier_ui":"Q000175","qualifier_name":"diagnosis","is_major_topic":true},{"descriptor_ui":"D003704","descriptor_name":"Dementia","qualifier_ui":"Q000175","qualifier_name":"diagnosis","is_major_topic":true},{"descriptor_ui":"D003704","descriptor_name":"Dementia","qualifier_ui":"Q000175","qualifier_name":"diagnosis","is_major_topic":true},{"descriptor_ui":"D003704","descriptor_name":"Dementia","qualifier_ui":"Q000378","qualifier_name":"metabolism","is_major_topic":true},{"descriptor_ui":"D003704","descriptor_name":"Dementia","qualifier_ui":"Q000378","qualifier_name":"metabolism","is_major_topic":true},{"descriptor_ui":"D003704","descriptor_name":"Dementia","qualifier_ui":"Q000378","qualifier_name":"metabolism","is_major_topic":true},{"descriptor_ui":"D003704","descriptor_name":"Dementia","qualifier_ui":"Q000378","qualifier_name":"metabolism","is_major_topic":true},{"descriptor_ui":"D003704","descriptor_name":"Dementia","qualifier_ui":"Q000473","qualifier_name":"pathology","is_major_topic":true},{"descriptor_ui":"D003704","descriptor_name":"Dementia","qualifier_ui":"Q000473","qualifier_name":"pathology","is_major_topic":true},{"descriptor_ui":"D003704","descriptor_name":"Dementia","qualifier_ui":"Q000473","qualifier_name":"pathology","is_major_topic":true},{"descriptor_ui":"D003704","descriptor_name":"Dementia","qualifier_ui":"Q000473","qualifier_name":"pathology","is_major_topic":true},{"descriptor_ui":"D005260","descriptor_name":"Female","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D005260","descriptor_name":"Female","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D005260","descriptor_name":"Female","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D005260","descriptor_name":"Female","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D006801","descriptor_name":"Humans","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D006801","descriptor_name":"Humans","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D006801","descriptor_name":"Humans","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D006801","descriptor_name":"Humans","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D008297","descriptor_name":"Male","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D008297","descriptor_name":"Male","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D008297","descriptor_name":"Male","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D008297","descriptor_name":"Male","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D015415","descriptor_name":"Biomarkers","qualifier_ui":"Q000097","qualifier_name":"blood","is_major_topic":false},{"descriptor_ui":"D015415","descriptor_name":"Biomarkers","qualifier_ui":"Q000097","qualifier_name":"blood","is_major_topic":false},{"descriptor_ui":"D015415","descriptor_name":"Biomarkers","qualifier_ui":"Q000097","qualifier_name":"blood","is_major_topic":false},{"descriptor_ui":"D015415","descriptor_name":"Biomarkers","qualifier_ui":"Q000097","qualifier_name":"blood","is_major_topic":false},{"descriptor_ui":"D016229","descriptor_name":"Amyloid beta-Peptides","qualifier_ui":"Q000378","qualifier_name":"metabolism","is_major_topic":false},{"descriptor_ui":"D016229","descriptor_name":"Amyloid beta-Peptides","qualifier_ui":"Q000378","qualifier_name":"metabolism","is_major_topic":false},{"descriptor_ui":"D016229","descriptor_name":"Amyloid beta-Peptides","qualifier_ui":"Q000378","qualifier_name":"metabolism","is_major_topic":false},{"descriptor_ui":"D016229","descriptor_name":"Amyloid beta-Peptides","qualifier_ui":"Q000378","qualifier_name":"metabolism","is_major_topic":false},{"descriptor_ui":"D016571","descriptor_name":"Neural Networks, Computer","qualifier_ui":null,"qualifier_name":null,"is_major_topic":true},{"descriptor_ui":"D016571","descriptor_name":"Neural Networks, Computer","qualifier_ui":null,"qualifier_name":null,"is_major_topic":true},{"descriptor_ui":"D016571","descriptor_name":"Neural Networks, Computer","qualifier_ui":null,"qualifier_name":null,"is_major_topic":true},{"descriptor_ui":"D016571","descriptor_name":"Neural Networks, Computer","qualifier_ui":null,"qualifier_name":null,"is_major_topic":true},{"descriptor_ui":"D060066","descriptor_name":"Protein Interaction Maps","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D060066","descriptor_name":"Protein Interaction Maps","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D060066","descriptor_name":"Protein Interaction Maps","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D060066","descriptor_name":"Protein Interaction Maps","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false}],"locations_count":3,"locations":[{"id":"doi:10.1093/bib/bbaf366","is_oa":true,"landing_page_url":"https://doi.org/10.1093/bib/bbaf366","pdf_url":"https://academic.oup.com/bib/article-pdf/26/4/bbaf366/63919093/bbaf366.pdf","source":{"id":"https://openalex.org/S91767247","display_name":"Briefings in Bioinformatics","issn_l":"1467-5463","issn":["1467-5463","1477-4054"],"is_oa":true,"is_in_doaj":true,"is_core":true,"host_organization":"https://openalex.org/P4310311648","host_organization_name":"Oxford University Press","host_organization_lineage":["https://openalex.org/P4310311648","https://openalex.org/P4310311647"],"host_organization_lineage_names":["Oxford University Press","University of Oxford"],"type":"journal"},"license":"cc-by","license_id":"https://openalex.org/licenses/cc-by","version":"publishedVersion","is_accepted":true,"is_published":true,"raw_source_name":"Briefings in Bioinformatics","raw_type":"journal-article"},{"id":"pmid:40748327","is_oa":false,"landing_page_url":"https://pubmed.ncbi.nlm.nih.gov/40748327","pdf_url":null,"source":{"id":"https://openalex.org/S4306525036","display_name":"PubMed","issn_l":null,"issn":null,"is_oa":false,"is_in_doaj":false,"is_core":false,"host_organization":"https://openalex.org/I1299303238","host_organization_name":"National Institutes of Health","host_organization_lineage":["https://openalex.org/I1299303238"],"host_organization_lineage_names":[],"type":"repository"},"license":null,"license_id":null,"version":"publishedVersion","is_accepted":true,"is_published":true,"raw_source_name":"Briefings in bioinformatics","raw_type":null},{"id":"pmh:oai:europepmc.org:11127944","is_oa":true,"landing_page_url":"https://www.ncbi.nlm.nih.gov/pmc/articles/12315549","pdf_url":null,"source":{"id":"https://openalex.org/S4306400806","display_name":"Europe PMC (PubMed Central)","issn_l":null,"issn":null,"is_oa":false,"is_in_doaj":false,"is_core":false,"host_organization":"https://openalex.org/I1303153112","host_organization_name":"European Bioinformatics Institute","host_organization_lineage":["https://openalex.org/I1303153112"],"host_organization_lineage_names":[],"type":"repository"},"license":"cc-by","license_id":"https://openalex.org/licenses/cc-by","version":"submittedVersion","is_accepted":false,"is_published":false,"raw_source_name":null,"raw_type":"Text"}],"best_oa_location":{"id":"doi:10.1093/bib/bbaf366","is_oa":true,"landing_page_url":"https://doi.org/10.1093/bib/bbaf366","pdf_url":"https://academic.oup.com/bib/article-pdf/26/4/bbaf366/63919093/bbaf366.pdf","source":{"id":"https://openalex.org/S91767247","display_name":"Briefings in Bioinformatics","issn_l":"1467-5463","issn":["1467-5463","1477-4054"],"is_oa":true,"is_in_doaj":true,"is_core":true,"host_organization":"https://openalex.org/P4310311648","host_organization_name":"Oxford University Press","host_organization_lineage":["https://openalex.org/P4310311648","https://openalex.org/P4310311647"],"host_organization_lineage_names":["Oxford University Press","University of Oxford"],"type":"journal"},"license":"cc-by","license_id":"https://openalex.org/licenses/cc-by","version":"publishedVersion","is_accepted":true,"is_published":true,"raw_source_name":"Briefings in Bioinformatics","raw_type":"journal-article"},"sustainable_development_goals":[{"id":"https://metadata.un.org/sdg/17","score":0.4000000059604645,"display_name":"Partnerships for the goals"}],"awards":[{"id":"https://openalex.org/G145480576","display_name":null,"funder_award_id":"2019R1A5A2026045","funder_id":"https://openalex.org/F4320322120","funder_display_name":"National Research Foundation of Korea"},{"id":"https://openalex.org/G2230387172","display_name":null,"funder_award_id":"2021R1A2C2003474","funder_id":"https://openalex.org/F4320328359","funder_display_name":"Ministry of Science and ICT, South Korea"},{"id":"https://openalex.org/G2557026744","display_name":null,"funder_award_id":"RS-2022-001653","funder_id":"https://openalex.org/F4320328359","funder_display_name":"Ministry of Science and ICT, South Korea"},{"id":"https://openalex.org/G4462968321","display_name":null,"funder_award_id":"2021R1A2C2003474","funder_id":"https://openalex.org/F4320322120","funder_display_name":"National Research Foundation of Korea"},{"id":"https://openalex.org/G4783937168","display_name":null,"funder_award_id":"2019R1A5A2026045","funder_id":"https://openalex.org/F4320328359","funder_display_name":"Ministry of Science and ICT, South Korea"},{"id":"https://openalex.org/G7241344044","display_name":null,"funder_award_id":"RS-2023-00255968","funder_id":"https://openalex.org/F4320328359","funder_display_name":"Ministry of Science and ICT, South Korea"}],"funders":[{"id":"https://openalex.org/F4320320671","display_name":"National Research Foundation","ror":"https://ror.org/05s0g1g46"},{"id":"https://openalex.org/F4320321354","display_name":"Ajou University","ror":"https://ror.org/03tzb2h73"},{"id":"https://openalex.org/F4320322107","display_name":"Korea Health Industry Development Institute","ror":"https://ror.org/00fdzyk40"},{"id":"https://openalex.org/F4320322120","display_name":"National Research Foundation of Korea","ror":"https://ror.org/013aysd81"},{"id":"https://openalex.org/F4320322724","display_name":"Ministry of Education, India","ror":"https://ror.org/048xjjh50"},{"id":"https://openalex.org/F4320328359","display_name":"Ministry of Science and ICT, South Korea","ror":"https://ror.org/01wpjm123"},{"id":"https://openalex.org/F4320332161","display_name":"National Institutes of Health","ror":"https://ror.org/01cwqze88"}],"has_content":{"grobid_xml":true,"pdf":true},"content_urls":{"pdf":"https://content.openalex.org/works/W4412838315.pdf","grobid_xml":"https://content.openalex.org/works/W4412838315.grobid-xml"},"referenced_works_count":86,"referenced_works":["https://openalex.org/W1971208141","https://openalex.org/W1979236238","https://openalex.org/W2034274969","https://openalex.org/W2058278576","https://openalex.org/W2063684676","https://openalex.org/W2071068165","https://openalex.org/W2091931051","https://openalex.org/W2093827602","https://openalex.org/W2120786099","https://openalex.org/W2146512944","https://openalex.org/W2291133510","https://openalex.org/W2302528231","https://openalex.org/W2358666620","https://openalex.org/W2417724549","https://openalex.org/W2517534055","https://openalex.org/W2734680224","https://openalex.org/W2785757836","https://openalex.org/W2792820766","https://openalex.org/W2798054687","https://openalex.org/W2896424462","https://openalex.org/W2911493122","https://openalex.org/W2921151989","https://openalex.org/W2938221890","https://openalex.org/W2943423326","https://openalex.org/W2962862931","https://openalex.org/W2963433607","https://openalex.org/W2964015378","https://openalex.org/W2997278492","https://openalex.org/W3004595534","https://openalex.org/W3039508055","https://openalex.org/W3110854330","https://openalex.org/W3119309452","https://openalex.org/W3153292507","https://openalex.org/W3170895581","https://openalex.org/W3182597378","https://openalex.org/W3190081583","https://openalex.org/W3192157621","https://openalex.org/W3198052269","https://openalex.org/W3198732863","https://openalex.org/W3199772305","https://openalex.org/W3212165552","https://openalex.org/W4200429384","https://openalex.org/W4205331309","https://openalex.org/W4213144865","https://openalex.org/W4213423501","https://openalex.org/W4214932215","https://openalex.org/W4281706790","https://openalex.org/W4304013871","https://openalex.org/W4309096512","https://openalex.org/W4310956261","https://openalex.org/W4311201147","https://openalex.org/W4313303223","https://openalex.org/W4320725391","https://openalex.org/W4323544166","https://openalex.org/W4366590614","https://openalex.org/W4366776521","https://openalex.org/W4367331101","https://openalex.org/W4384819023","https://openalex.org/W4385709178","https://openalex.org/W4386022877","https://openalex.org/W4386098809","https://openalex.org/W4386347024","https://openalex.org/W4386387831","https://openalex.org/W4388627254","https://openalex.org/W4388867239","https://openalex.org/W4388942757","https://openalex.org/W4391743929","https://openalex.org/W4392763607","https://openalex.org/W4398324682","https://openalex.org/W4399354264","https://openalex.org/W4399902461","https://openalex.org/W4400300826","https://openalex.org/W4401406616","https://openalex.org/W4402170902","https://openalex.org/W4403406009","https://openalex.org/W4403732681","https://openalex.org/W4405514935","https://openalex.org/W4406766503","https://openalex.org/W4408176466","https://openalex.org/W4408957790","https://openalex.org/W4409819409","https://openalex.org/W4410812508","https://openalex.org/W6726873649","https://openalex.org/W6737947904","https://openalex.org/W6803334427","https://openalex.org/W6869453699"],"related_works":["https://openalex.org/W2409059799","https://openalex.org/W364817481","https://openalex.org/W1972242255","https://openalex.org/W2890927416","https://openalex.org/W2775021631","https://openalex.org/W2128765271","https://openalex.org/W2966412519","https://openalex.org/W2028416698","https://openalex.org/W3126949736","https://openalex.org/W4285295191"],"abstract_inverted_index":{"Dementia":[0],"diagnosis":[1],"relies":[2],"on":[3],"identifying":[4,36],"neuropathological":[5,37,110],"features,":[6,38],"such":[7],"as":[8,28,187,212,236],"beta-amyloid":[9],"(A\u03b2)":[10],"deposition,":[11],"medial":[12],"temporal":[13],"lobe":[14],"atrophy":[15],"(MTA),":[16],"and":[17,31,58,83,88,117,170,194],"white":[18],"matter":[19],"hyperintensity":[20],"(WMH).":[21],"Recently,":[22],"plasma":[23,119,188],"protein":[24,120,140,163,176,189],"biomarkers":[25,190],"have":[26],"emerged":[27],"a":[29,104,179,226,237],"cost-effective":[30],"less":[32],"invasive":[33],"tool":[34,240],"for":[35,44,54,75,114,191],"enhanced":[39],"by":[40,147,223],"machine":[41],"learning":[42],"(ML)":[43],"precise":[45],"diagnosis.":[46,97],"However,":[47],"most":[48],"ML":[49],"studies":[50],"fail":[51],"to":[52,67,107,215],"account":[53],"protein-protein":[55],"interactions":[56],"(PPIs)":[57],"synergetic":[59,134,145],"effects":[60,135,146,150],"between":[61],"proteins,":[62],"overlooking":[63],"their":[64,89],"collective":[65],"contributions":[66],"disease":[68],"mechanisms.":[69],"Additionally,":[70,218],"the":[71,81,93,128,131,137,154,172,219],"lack":[72],"of":[73,86,95,125,130,151,175],"consideration":[74],"functional":[76,138,162],"properties":[77,174],"may":[78],"result":[79],"in":[80,112,161,203,241],"redundant":[82],"imbalanced":[84],"representation":[85],"proteins":[87,152,184],"functions,":[90],"potentially":[91],"limiting":[92],"effectiveness":[94],"dementia":[96,192,205],"In":[98],"this":[99],"study,":[100],"we":[101],"propose":[102],"NeuroFANN,":[103],"method":[105],"designed":[106],"classify":[108],"three":[109],"subtypes":[111,193],"dementia-positivity":[113],"A\u03b2,":[115],"MTA,":[116],"WMH-using":[118],"biomarkers.":[121,177],"A":[122],"key":[123,213],"feature":[124],"NeuroFANN":[126,143,199,224],"is":[127],"combination":[129],"PPI":[132,155,168],"network-based":[133],"with":[136,207,229],"annotation-based":[139],"biomarker":[141],"clustering.":[142],"extracts":[144],"propagating":[148],"independent":[149],"across":[153],"network,":[156],"which":[157],"are":[158],"then":[159],"aggregated":[160],"clusters,":[164],"thereby":[165],"enabling":[166],"global":[167],"awareness":[169],"capturing":[171],"biological":[173],"From":[178],"South":[180],"Korean":[181],"cohort,":[182],"54":[183],"were":[185],"identified":[186],"grouped":[195],"into":[196],"16":[197],"clusters.":[198],"outperformed":[200],"comparison":[201],"methods":[202],"classifying":[204],"subtypes,":[206],"its":[208,234],"core":[209],"components":[210],"validated":[211],"contributors":[214],"superior":[216],"performance.":[217],"risk":[220],"scores":[221],"predicted":[222],"showed":[225],"strong":[227],"association":[228],"longitudinal":[230],"cognitive":[231],"decline,":[232],"demonstrating":[233],"potential":[235],"valuable":[238],"diagnostic":[239],"clinical":[242],"settings.":[243]},"counts_by_year":[],"updated_date":"2026-06-11T09:08:48.828518","created_date":"2025-10-10T00:00:00"}
