{"id":"https://openalex.org/W4412487449","doi":"https://doi.org/10.1093/bib/bbaf308","title":"PREDAC-FluB: predicting antigenic clusters of seasonal influenza B viruses with protein language model embedding based convolutional neural network","display_name":"PREDAC-FluB: predicting antigenic clusters of seasonal influenza B viruses with protein language model embedding based convolutional neural network","publication_year":2025,"publication_date":"2025-07-01","ids":{"openalex":"https://openalex.org/W4412487449","doi":"https://doi.org/10.1093/bib/bbaf308","pmid":"https://pubmed.ncbi.nlm.nih.gov/40665740"},"language":"en","primary_location":{"id":"doi:10.1093/bib/bbaf308","is_oa":true,"landing_page_url":"https://doi.org/10.1093/bib/bbaf308","pdf_url":"https://academic.oup.com/bib/article-pdf/26/4/bbaf308/63773182/bbaf308.pdf","source":{"id":"https://openalex.org/S91767247","display_name":"Briefings in Bioinformatics","issn_l":"1467-5463","issn":["1467-5463","1477-4054"],"is_oa":true,"is_in_doaj":true,"is_core":true,"host_organization":"https://openalex.org/P4310311648","host_organization_name":"Oxford University Press","host_organization_lineage":["https://openalex.org/P4310311648","https://openalex.org/P4310311647"],"host_organization_lineage_names":["Oxford University Press","University of Oxford"],"type":"journal"},"license":"cc-by","license_id":"https://openalex.org/licenses/cc-by","version":"publishedVersion","is_accepted":true,"is_published":true,"raw_source_name":"Briefings in Bioinformatics","raw_type":"journal-article"},"type":"article","indexed_in":["crossref","doaj","pubmed"],"open_access":{"is_oa":true,"oa_status":"gold","oa_url":"https://academic.oup.com/bib/article-pdf/26/4/bbaf308/63773182/bbaf308.pdf","any_repository_has_fulltext":true},"authorships":[{"author_position":"first","author":{"id":"https://openalex.org/A5063855971","display_name":"Wenping Xie","orcid":"https://orcid.org/0000-0002-3286-7704"},"institutions":[{"id":"https://openalex.org/I4210090512","display_name":"Guangzhou Experimental Station","ror":"https://ror.org/00f2c2516","country_code":"CN","type":"facility","lineage":["https://openalex.org/I107851509","https://openalex.org/I4210090512","https://openalex.org/I4210127390","https://openalex.org/I4210151987"]},{"id":"https://openalex.org/I47720641","display_name":"Huazhong University of Science and Technology","ror":"https://ror.org/00p991c53","country_code":"CN","type":"education","lineage":["https://openalex.org/I47720641"]}],"countries":["CN"],"is_corresponding":true,"raw_author_name":"Wenping Xie","raw_affiliation_strings":["College of Life Science and Technology, Huazhong University of Science and Technology , No. 1037 Luoyu Road, Wuhan 430074, Hubei Province ,","Guangzhou National Laboratory , No. 9 XingDaoHuanBei Road, Guangzhou International Bio Island, Guangzhou 510005, Guangdong Province ,"],"affiliations":[{"raw_affiliation_string":"College of Life Science and Technology, Huazhong University of Science and Technology , No. 1037 Luoyu Road, Wuhan 430074, Hubei Province ,","institution_ids":["https://openalex.org/I47720641"]},{"raw_affiliation_string":"Guangzhou National Laboratory , No. 9 XingDaoHuanBei Road, Guangzhou International Bio Island, Guangzhou 510005, Guangdong Province ,","institution_ids":["https://openalex.org/I4210090512"]}]},{"author_position":"middle","author":{"id":"https://openalex.org/A5108777850","display_name":"Jingze Liu","orcid":null},"institutions":[{"id":"https://openalex.org/I200296433","display_name":"Chinese Academy of Medical Sciences & Peking Union Medical College","ror":"https://ror.org/02drdmm93","country_code":"CN","type":"education","lineage":["https://openalex.org/I200296433"]},{"id":"https://openalex.org/I4210086543","display_name":"Industrial Development Bureau","ror":"https://ror.org/001s1be73","country_code":"TW","type":"government","lineage":["https://openalex.org/I1327533815","https://openalex.org/I4210086543","https://openalex.org/I4405257903"]},{"id":"https://openalex.org/I4210122727","display_name":"Suzhou Institute of Systems Medicine","ror":"https://ror.org/02szepc22","country_code":"CN","type":"facility","lineage":["https://openalex.org/I4210122727","https://openalex.org/I4210141683"]}],"countries":["CN","TW"],"is_corresponding":false,"raw_author_name":"Jingze Liu","raw_affiliation_strings":["Ruogu Intelligent Technology (Suqian) Company, Limited , No. 110 Jiangshan Avenue, Suqian High-Tech Industrial Development Zone, Suqian 223801, Jiangsu Province ,","State Key Laboratory of Common Mechanism Research for Major Diseases, Suzhou Institute of Systems Medicine, Chinese Academy of Medical Sciences & Peking Union Medical College , No. 100 ChongWen Road, Suzhou 215123, Jiangsu Province,"],"affiliations":[{"raw_affiliation_string":"Ruogu Intelligent Technology (Suqian) Company, Limited , No. 110 Jiangshan Avenue, Suqian High-Tech Industrial Development Zone, Suqian 223801, Jiangsu Province ,","institution_ids":["https://openalex.org/I4210086543"]},{"raw_affiliation_string":"State Key Laboratory of Common Mechanism Research for Major Diseases, Suzhou Institute of Systems Medicine, Chinese Academy of Medical Sciences & Peking Union Medical College , No. 100 ChongWen Road, Suzhou 215123, Jiangsu Province,","institution_ids":["https://openalex.org/I200296433","https://openalex.org/I4210122727"]}]},{"author_position":"middle","author":{"id":"https://openalex.org/A5100443602","display_name":"Chuan Wang","orcid":"https://orcid.org/0000-0002-5296-0631"},"institutions":[{"id":"https://openalex.org/I157773358","display_name":"Sun Yat-sen University","ror":"https://ror.org/0064kty71","country_code":"CN","type":"education","lineage":["https://openalex.org/I157773358"]},{"id":"https://openalex.org/I4210086543","display_name":"Industrial Development Bureau","ror":"https://ror.org/001s1be73","country_code":"TW","type":"government","lineage":["https://openalex.org/I1327533815","https://openalex.org/I4210086543","https://openalex.org/I4405257903"]},{"id":"https://openalex.org/I4210090512","display_name":"Guangzhou Experimental Station","ror":"https://ror.org/00f2c2516","country_code":"CN","type":"facility","lineage":["https://openalex.org/I107851509","https://openalex.org/I4210090512","https://openalex.org/I4210127390","https://openalex.org/I4210151987"]}],"countries":["CN","TW"],"is_corresponding":false,"raw_author_name":"Chuan Wang","raw_affiliation_strings":["College of Life Science and Technology, Sun Yat-sen University , No. 135 Xingang Xi Road, Guangzhou, 510275, Guangdong Province ,","Guangzhou National Laboratory , No. 9 XingDaoHuanBei Road, Guangzhou International Bio Island, Guangzhou 510005, Guangdong Province ,","Ruogu Intelligent Technology (Suqian) Company, Limited , No. 110 Jiangshan Avenue, Suqian High-Tech Industrial Development Zone, Suqian 223801, Jiangsu Province ,"],"affiliations":[{"raw_affiliation_string":"College of Life Science and Technology, Sun Yat-sen University , No. 135 Xingang Xi Road, Guangzhou, 510275, Guangdong Province ,","institution_ids":["https://openalex.org/I157773358"]},{"raw_affiliation_string":"Guangzhou National Laboratory , No. 9 XingDaoHuanBei Road, Guangzhou International Bio Island, Guangzhou 510005, Guangdong Province ,","institution_ids":["https://openalex.org/I4210090512"]},{"raw_affiliation_string":"Ruogu Intelligent Technology (Suqian) Company, Limited , No. 110 Jiangshan Avenue, Suqian High-Tech Industrial Development Zone, Suqian 223801, Jiangsu Province ,","institution_ids":["https://openalex.org/I4210086543"]}]},{"author_position":"middle","author":{"id":"https://openalex.org/A5030269757","display_name":"Jiangyuan Wang","orcid":"https://orcid.org/0000-0001-9810-0912"},"institutions":[{"id":"https://openalex.org/I4210090512","display_name":"Guangzhou Experimental Station","ror":"https://ror.org/00f2c2516","country_code":"CN","type":"facility","lineage":["https://openalex.org/I107851509","https://openalex.org/I4210090512","https://openalex.org/I4210127390","https://openalex.org/I4210151987"]}],"countries":["CN"],"is_corresponding":false,"raw_author_name":"Jiangyuan Wang","raw_affiliation_strings":["Guangzhou National Laboratory , No. 9 XingDaoHuanBei Road, Guangzhou International Bio Island, Guangzhou 510005, Guangdong Province ,"],"affiliations":[{"raw_affiliation_string":"Guangzhou National Laboratory , No. 9 XingDaoHuanBei Road, Guangzhou International Bio Island, Guangzhou 510005, Guangdong Province ,","institution_ids":["https://openalex.org/I4210090512"]}]},{"author_position":"middle","author":{"id":"https://openalex.org/A5100649718","display_name":"Wenjie Han","orcid":"https://orcid.org/0000-0003-2950-1178"},"institutions":[{"id":"https://openalex.org/I157773358","display_name":"Sun Yat-sen University","ror":"https://ror.org/0064kty71","country_code":"CN","type":"education","lineage":["https://openalex.org/I157773358"]}],"countries":["CN"],"is_corresponding":false,"raw_author_name":"Wenjie Han","raw_affiliation_strings":["School of Public Health (Shenzhen), Sun Yat-sen University , No. 135 Xingang Xi Road, Guangzhou, 510275, Guangdong Province ,"],"affiliations":[{"raw_affiliation_string":"School of Public Health (Shenzhen), Sun Yat-sen University , No. 135 Xingang Xi Road, Guangzhou, 510275, Guangdong Province ,","institution_ids":["https://openalex.org/I157773358"]}]},{"author_position":"middle","author":{"id":"https://openalex.org/A5037335167","display_name":"Yousong Peng","orcid":"https://orcid.org/0000-0002-5482-9506"},"institutions":[{"id":"https://openalex.org/I16609230","display_name":"Hunan University","ror":"https://ror.org/05htk5m33","country_code":"CN","type":"education","lineage":["https://openalex.org/I16609230"]}],"countries":["CN"],"is_corresponding":false,"raw_author_name":"Yousong Peng","raw_affiliation_strings":["College of Biology, Hunan University , Lushan Road (S), Yuelu District, Changsha 410082, Hunan Province ,"],"affiliations":[{"raw_affiliation_string":"College of Biology, Hunan University , Lushan Road (S), Yuelu District, Changsha 410082, Hunan Province ,","institution_ids":["https://openalex.org/I16609230"]}]},{"author_position":"middle","author":{"id":"https://openalex.org/A5051657705","display_name":"Xiangjun Du","orcid":"https://orcid.org/0000-0001-8184-8430"},"institutions":[{"id":"https://openalex.org/I157773358","display_name":"Sun Yat-sen University","ror":"https://ror.org/0064kty71","country_code":"CN","type":"education","lineage":["https://openalex.org/I157773358"]}],"countries":["CN"],"is_corresponding":false,"raw_author_name":"Xiangjun Du","raw_affiliation_strings":["School of Public Health (Shenzhen), Sun Yat-sen University , No. 135 Xingang Xi Road, Guangzhou, 510275, Guangdong Province ,"],"affiliations":[{"raw_affiliation_string":"School of Public Health (Shenzhen), Sun Yat-sen University , No. 135 Xingang Xi Road, Guangzhou, 510275, Guangdong Province ,","institution_ids":["https://openalex.org/I157773358"]}]},{"author_position":"middle","author":{"id":"https://openalex.org/A5011150151","display_name":"Jing Meng","orcid":"https://orcid.org/0000-0001-9594-8483"},"institutions":[{"id":"https://openalex.org/I16764540","display_name":"University of Suwon","ror":"https://ror.org/03ysk5e42","country_code":"KR","type":"education","lineage":["https://openalex.org/I16764540"]},{"id":"https://openalex.org/I4210086543","display_name":"Industrial Development Bureau","ror":"https://ror.org/001s1be73","country_code":"TW","type":"government","lineage":["https://openalex.org/I1327533815","https://openalex.org/I4210086543","https://openalex.org/I4405257903"]}],"countries":["KR","TW"],"is_corresponding":false,"raw_author_name":"Jing Meng","raw_affiliation_strings":["Ruogu Intelligent Technology (Suqian) Company, Limited , No. 110 Jiangshan Avenue, Suqian High-Tech Industrial Development Zone, Suqian 223801, Jiangsu Province ,","School of Information Engineering, Suqian University ,"],"affiliations":[{"raw_affiliation_string":"Ruogu Intelligent Technology (Suqian) Company, Limited , No. 110 Jiangshan Avenue, Suqian High-Tech Industrial Development Zone, Suqian 223801, Jiangsu Province ,","institution_ids":["https://openalex.org/I4210086543"]},{"raw_affiliation_string":"School of Information Engineering, Suqian University ,","institution_ids":["https://openalex.org/I16764540"]}]},{"author_position":"middle","author":{"id":"https://openalex.org/A5076346443","display_name":"Kang Ning","orcid":"https://orcid.org/0000-0003-3325-5387"},"institutions":[{"id":"https://openalex.org/I47720641","display_name":"Huazhong University of Science and Technology","ror":"https://ror.org/00p991c53","country_code":"CN","type":"education","lineage":["https://openalex.org/I47720641"]}],"countries":["CN"],"is_corresponding":false,"raw_author_name":"Kang Ning","raw_affiliation_strings":["College of Life Science and Technology, Huazhong University of Science and Technology , No. 1037 Luoyu Road, Wuhan 430074, Hubei Province ,"],"affiliations":[{"raw_affiliation_string":"College of Life Science and Technology, Huazhong University of Science and Technology , No. 1037 Luoyu Road, Wuhan 430074, Hubei Province ,","institution_ids":["https://openalex.org/I47720641"]}]},{"author_position":"last","author":{"id":"https://openalex.org/A5062116814","display_name":"Taijiao Jiang","orcid":"https://orcid.org/0000-0002-6280-6347"},"institutions":[{"id":"https://openalex.org/I4210090512","display_name":"Guangzhou Experimental Station","ror":"https://ror.org/00f2c2516","country_code":"CN","type":"facility","lineage":["https://openalex.org/I107851509","https://openalex.org/I4210090512","https://openalex.org/I4210127390","https://openalex.org/I4210151987"]},{"id":"https://openalex.org/I47720641","display_name":"Huazhong University of Science and Technology","ror":"https://ror.org/00p991c53","country_code":"CN","type":"education","lineage":["https://openalex.org/I47720641"]}],"countries":["CN"],"is_corresponding":false,"raw_author_name":"Taijiao Jiang","raw_affiliation_strings":["College of Life Science and Technology, Huazhong University of Science and Technology , No. 1037 Luoyu Road, Wuhan 430074, Hubei Province ,","Guangzhou National Laboratory , No. 9 XingDaoHuanBei Road, Guangzhou International Bio Island, Guangzhou 510005, Guangdong Province ,"],"affiliations":[{"raw_affiliation_string":"College of Life Science and Technology, Huazhong University of Science and Technology , No. 1037 Luoyu Road, Wuhan 430074, Hubei Province ,","institution_ids":["https://openalex.org/I47720641"]},{"raw_affiliation_string":"Guangzhou National Laboratory , No. 9 XingDaoHuanBei Road, Guangzhou International Bio Island, Guangzhou 510005, Guangdong Province ,","institution_ids":["https://openalex.org/I4210090512"]}]}],"institutions":[],"countries_distinct_count":3,"institutions_distinct_count":10,"corresponding_author_ids":["https://openalex.org/A5063855971"],"corresponding_institution_ids":["https://openalex.org/I4210090512","https://openalex.org/I47720641"],"apc_list":{"value":4011,"currency":"USD","value_usd":4011},"apc_paid":{"value":4011,"currency":"USD","value_usd":4011},"fwci":1.2096,"has_fulltext":true,"cited_by_count":1,"citation_normalized_percentile":{"value":0.80787654,"is_in_top_1_percent":false,"is_in_top_10_percent":false},"cited_by_percentile_year":{"min":91,"max":95},"biblio":{"volume":"26","issue":"4","first_page":null,"last_page":null},"is_retracted":false,"is_paratext":false,"is_xpac":false,"primary_topic":{"id":"https://openalex.org/T10167","display_name":"Influenza Virus Research Studies","score":1.0,"subfield":{"id":"https://openalex.org/subfields/2713","display_name":"Epidemiology"},"field":{"id":"https://openalex.org/fields/27","display_name":"Medicine"},"domain":{"id":"https://openalex.org/domains/4","display_name":"Health Sciences"}},"topics":[{"id":"https://openalex.org/T10167","display_name":"Influenza Virus Research Studies","score":1.0,"subfield":{"id":"https://openalex.org/subfields/2713","display_name":"Epidemiology"},"field":{"id":"https://openalex.org/fields/27","display_name":"Medicine"},"domain":{"id":"https://openalex.org/domains/4","display_name":"Health Sciences"}},{"id":"https://openalex.org/T12576","display_name":"vaccines and immunoinformatics approaches","score":0.9988999962806702,"subfield":{"id":"https://openalex.org/subfields/1312","display_name":"Molecular Biology"},"field":{"id":"https://openalex.org/fields/13","display_name":"Biochemistry, Genetics and Molecular Biology"},"domain":{"id":"https://openalex.org/domains/1","display_name":"Life Sciences"}},{"id":"https://openalex.org/T12254","display_name":"Machine Learning in Bioinformatics","score":0.9961000084877014,"subfield":{"id":"https://openalex.org/subfields/1312","display_name":"Molecular Biology"},"field":{"id":"https://openalex.org/fields/13","display_name":"Biochemistry, Genetics and Molecular Biology"},"domain":{"id":"https://openalex.org/domains/1","display_name":"Life Sciences"}}],"keywords":[{"id":"https://openalex.org/keywords/antigen","display_name":"Antigen","score":0.5869899392127991},{"id":"https://openalex.org/keywords/antigenic-variation","display_name":"Antigenic variation","score":0.5785095691680908},{"id":"https://openalex.org/keywords/computational-biology","display_name":"Computational biology","score":0.49454423785209656},{"id":"https://openalex.org/keywords/antigenic-drift","display_name":"Antigenic drift","score":0.47858142852783203},{"id":"https://openalex.org/keywords/lineage","display_name":"Lineage (genetic)","score":0.4644719660282135},{"id":"https://openalex.org/keywords/repertoire","display_name":"Repertoire","score":0.4399261474609375},{"id":"https://openalex.org/keywords/biology","display_name":"Biology","score":0.4344397485256195},{"id":"https://openalex.org/keywords/virology","display_name":"Virology","score":0.40637508034706116},{"id":"https://openalex.org/keywords/computer-science","display_name":"Computer science","score":0.3404081165790558},{"id":"https://openalex.org/keywords/influenza-a-virus","display_name":"Influenza A virus","score":0.3031611442565918},{"id":"https://openalex.org/keywords/virus","display_name":"Virus","score":0.29634889960289},{"id":"https://openalex.org/keywords/gene","display_name":"Gene","score":0.23922279477119446},{"id":"https://openalex.org/keywords/genetics","display_name":"Genetics","score":0.19569793343544006}],"concepts":[{"id":"https://openalex.org/C147483822","wikidata":"https://www.wikidata.org/wiki/Q103537","display_name":"Antigen","level":2,"score":0.5869899392127991},{"id":"https://openalex.org/C191942190","wikidata":"https://www.wikidata.org/wiki/Q4774739","display_name":"Antigenic variation","level":3,"score":0.5785095691680908},{"id":"https://openalex.org/C70721500","wikidata":"https://www.wikidata.org/wiki/Q177005","display_name":"Computational biology","level":1,"score":0.49454423785209656},{"id":"https://openalex.org/C7842527","wikidata":"https://www.wikidata.org/wiki/Q575258","display_name":"Antigenic drift","level":4,"score":0.47858142852783203},{"id":"https://openalex.org/C2776817793","wikidata":"https://www.wikidata.org/wiki/Q6553369","display_name":"Lineage (genetic)","level":3,"score":0.4644719660282135},{"id":"https://openalex.org/C2778473898","wikidata":"https://www.wikidata.org/wiki/Q2145110","display_name":"Repertoire","level":2,"score":0.4399261474609375},{"id":"https://openalex.org/C86803240","wikidata":"https://www.wikidata.org/wiki/Q420","display_name":"Biology","level":0,"score":0.4344397485256195},{"id":"https://openalex.org/C159047783","wikidata":"https://www.wikidata.org/wiki/Q7215","display_name":"Virology","level":1,"score":0.40637508034706116},{"id":"https://openalex.org/C41008148","wikidata":"https://www.wikidata.org/wiki/Q21198","display_name":"Computer science","level":0,"score":0.3404081165790558},{"id":"https://openalex.org/C2777546802","wikidata":"https://www.wikidata.org/wiki/Q834390","display_name":"Influenza A virus","level":3,"score":0.3031611442565918},{"id":"https://openalex.org/C2522874641","wikidata":"https://www.wikidata.org/wiki/Q808","display_name":"Virus","level":2,"score":0.29634889960289},{"id":"https://openalex.org/C104317684","wikidata":"https://www.wikidata.org/wiki/Q7187","display_name":"Gene","level":2,"score":0.23922279477119446},{"id":"https://openalex.org/C54355233","wikidata":"https://www.wikidata.org/wiki/Q7162","display_name":"Genetics","level":1,"score":0.19569793343544006},{"id":"https://openalex.org/C121332964","wikidata":"https://www.wikidata.org/wiki/Q413","display_name":"Physics","level":0,"score":0.0},{"id":"https://openalex.org/C24890656","wikidata":"https://www.wikidata.org/wiki/Q82811","display_name":"Acoustics","level":1,"score":0.0}],"mesh":[{"descriptor_ui":"D000098415","descriptor_name":"Convolutional Neural Networks","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D000098415","descriptor_name":"Convolutional Neural Networks","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D000098415","descriptor_name":"Convolutional Neural Networks","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D000098415","descriptor_name":"Convolutional Neural Networks","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D000098415","descriptor_name":"Convolutional Neural Networks","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D000956","descriptor_name":"Antigens, Viral","qualifier_ui":"Q000235","qualifier_name":"genetics","is_major_topic":true},{"descriptor_ui":"D000956","descriptor_name":"Antigens, Viral","qualifier_ui":"Q000235","qualifier_name":"genetics","is_major_topic":true},{"descriptor_ui":"D000956","descriptor_name":"Antigens, Viral","qualifier_ui":"Q000235","qualifier_name":"genetics","is_major_topic":true},{"descriptor_ui":"D000956","descriptor_name":"Antigens, Viral","qualifier_ui":"Q000235","qualifier_name":"genetics","is_major_topic":true},{"descriptor_ui":"D000956","descriptor_name":"Antigens, Viral","qualifier_ui":"Q000235","qualifier_name":"genetics","is_major_topic":true},{"descriptor_ui":"D000956","descriptor_name":"Antigens, Viral","qualifier_ui":"Q000276","qualifier_name":"immunology","is_major_topic":true},{"descriptor_ui":"D000956","descriptor_name":"Antigens, Viral","qualifier_ui":"Q000276","qualifier_name":"immunology","is_major_topic":true},{"descriptor_ui":"D000956","descriptor_name":"Antigens, Viral","qualifier_ui":"Q000276","qualifier_name":"immunology","is_major_topic":true},{"descriptor_ui":"D000956","descriptor_name":"Antigens, Viral","qualifier_ui":"Q000276","qualifier_name":"immunology","is_major_topic":true},{"descriptor_ui":"D000956","descriptor_name":"Antigens, Viral","qualifier_ui":"Q000276","qualifier_name":"immunology","is_major_topic":true},{"descriptor_ui":"D006801","descriptor_name":"Humans","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D006801","descriptor_name":"Humans","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D006801","descriptor_name":"Humans","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D006801","descriptor_name":"Humans","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D006801","descriptor_name":"Humans","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D007251","descriptor_name":"Influenza, Human","qualifier_ui":"Q000276","qualifier_name":"immunology","is_major_topic":true},{"descriptor_ui":"D007251","descriptor_name":"Influenza, Human","qualifier_ui":"Q000276","qualifier_name":"immunology","is_major_topic":true},{"descriptor_ui":"D007251","descriptor_name":"Influenza, Human","qualifier_ui":"Q000276","qualifier_name":"immunology","is_major_topic":true},{"descriptor_ui":"D007251","descriptor_name":"Influenza, Human","qualifier_ui":"Q000276","qualifier_name":"immunology","is_major_topic":true},{"descriptor_ui":"D007251","descriptor_name":"Influenza, Human","qualifier_ui":"Q000276","qualifier_name":"immunology","is_major_topic":true},{"descriptor_ui":"D007251","descriptor_name":"Influenza, Human","qualifier_ui":"Q000821","qualifier_name":"virology","is_major_topic":true},{"descriptor_ui":"D007251","descriptor_name":"Influenza, Human","qualifier_ui":"Q000821","qualifier_name":"virology","is_major_topic":true},{"descriptor_ui":"D007251","descriptor_name":"Influenza, Human","qualifier_ui":"Q000821","qualifier_name":"virology","is_major_topic":true},{"descriptor_ui":"D007251","descriptor_name":"Influenza, Human","qualifier_ui":"Q000821","qualifier_name":"virology","is_major_topic":true},{"descriptor_ui":"D007251","descriptor_name":"Influenza, Human","qualifier_ui":"Q000821","qualifier_name":"virology","is_major_topic":true},{"descriptor_ui":"D009981","descriptor_name":"Influenza B virus","qualifier_ui":"Q000235","qualifier_name":"genetics","is_major_topic":true},{"descriptor_ui":"D009981","descriptor_name":"Influenza B virus","qualifier_ui":"Q000235","qualifier_name":"genetics","is_major_topic":true},{"descriptor_ui":"D009981","descriptor_name":"Influenza B virus","qualifier_ui":"Q000235","qualifier_name":"genetics","is_major_topic":true},{"descriptor_ui":"D009981","descriptor_name":"Influenza B virus","qualifier_ui":"Q000235","qualifier_name":"genetics","is_major_topic":true},{"descriptor_ui":"D009981","descriptor_name":"Influenza B virus","qualifier_ui":"Q000235","qualifier_name":"genetics","is_major_topic":true},{"descriptor_ui":"D009981","descriptor_name":"Influenza B virus","qualifier_ui":"Q000276","qualifier_name":"immunology","is_major_topic":true},{"descriptor_ui":"D009981","descriptor_name":"Influenza B virus","qualifier_ui":"Q000276","qualifier_name":"immunology","is_major_topic":true},{"descriptor_ui":"D009981","descriptor_name":"Influenza B virus","qualifier_ui":"Q000276","qualifier_name":"immunology","is_major_topic":true},{"descriptor_ui":"D009981","descriptor_name":"Influenza B virus","qualifier_ui":"Q000276","qualifier_name":"immunology","is_major_topic":true},{"descriptor_ui":"D009981","descriptor_name":"Influenza B virus","qualifier_ui":"Q000276","qualifier_name":"immunology","is_major_topic":true},{"descriptor_ui":"D012621","descriptor_name":"Seasons","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D012621","descriptor_name":"Seasons","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D012621","descriptor_name":"Seasons","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D012621","descriptor_name":"Seasons","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D012621","descriptor_name":"Seasons","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D016571","descriptor_name":"Neural Networks, Computer","qualifier_ui":null,"qualifier_name":null,"is_major_topic":true},{"descriptor_ui":"D016571","descriptor_name":"Neural Networks, Computer","qualifier_ui":null,"qualifier_name":null,"is_major_topic":true},{"descriptor_ui":"D016571","descriptor_name":"Neural Networks, Computer","qualifier_ui":null,"qualifier_name":null,"is_major_topic":true},{"descriptor_ui":"D016571","descriptor_name":"Neural Networks, Computer","qualifier_ui":null,"qualifier_name":null,"is_major_topic":true},{"descriptor_ui":"D016571","descriptor_name":"Neural Networks, Computer","qualifier_ui":null,"qualifier_name":null,"is_major_topic":true},{"descriptor_ui":"D019295","descriptor_name":"Computational Biology","qualifier_ui":"Q000379","qualifier_name":"methods","is_major_topic":false},{"descriptor_ui":"D019295","descriptor_name":"Computational Biology","qualifier_ui":"Q000379","qualifier_name":"methods","is_major_topic":false},{"descriptor_ui":"D019295","descriptor_name":"Computational Biology","qualifier_ui":"Q000379","qualifier_name":"methods","is_major_topic":false},{"descriptor_ui":"D019295","descriptor_name":"Computational Biology","qualifier_ui":"Q000379","qualifier_name":"methods","is_major_topic":false},{"descriptor_ui":"D019295","descriptor_name":"Computational Biology","qualifier_ui":"Q000379","qualifier_name":"methods","is_major_topic":false}],"locations_count":3,"locations":[{"id":"doi:10.1093/bib/bbaf308","is_oa":true,"landing_page_url":"https://doi.org/10.1093/bib/bbaf308","pdf_url":"https://academic.oup.com/bib/article-pdf/26/4/bbaf308/63773182/bbaf308.pdf","source":{"id":"https://openalex.org/S91767247","display_name":"Briefings in Bioinformatics","issn_l":"1467-5463","issn":["1467-5463","1477-4054"],"is_oa":true,"is_in_doaj":true,"is_core":true,"host_organization":"https://openalex.org/P4310311648","host_organization_name":"Oxford University Press","host_organization_lineage":["https://openalex.org/P4310311648","https://openalex.org/P4310311647"],"host_organization_lineage_names":["Oxford University Press","University of Oxford"],"type":"journal"},"license":"cc-by","license_id":"https://openalex.org/licenses/cc-by","version":"publishedVersion","is_accepted":true,"is_published":true,"raw_source_name":"Briefings in Bioinformatics","raw_type":"journal-article"},{"id":"pmid:40665740","is_oa":false,"landing_page_url":"https://pubmed.ncbi.nlm.nih.gov/40665740","pdf_url":null,"source":{"id":"https://openalex.org/S4306525036","display_name":"PubMed","issn_l":null,"issn":null,"is_oa":false,"is_in_doaj":false,"is_core":false,"host_organization":"https://openalex.org/I1299303238","host_organization_name":"National Institutes of Health","host_organization_lineage":["https://openalex.org/I1299303238"],"host_organization_lineage_names":[],"type":"repository"},"license":null,"license_id":null,"version":"publishedVersion","is_accepted":true,"is_published":true,"raw_source_name":"Briefings in bioinformatics","raw_type":null},{"id":"pmh:oai:pubmedcentral.nih.gov:12264208","is_oa":true,"landing_page_url":"https://www.ncbi.nlm.nih.gov/pmc/articles/12264208","pdf_url":null,"source":{"id":"https://openalex.org/S2764455111","display_name":"PubMed Central","issn_l":null,"issn":null,"is_oa":true,"is_in_doaj":false,"is_core":false,"host_organization":"https://openalex.org/I1299303238","host_organization_name":"National Institutes of Health","host_organization_lineage":["https://openalex.org/I1299303238"],"host_organization_lineage_names":[],"type":"repository"},"license":"cc-by","license_id":"https://openalex.org/licenses/cc-by","version":"submittedVersion","is_accepted":false,"is_published":false,"raw_source_name":"Brief Bioinform","raw_type":"Text"}],"best_oa_location":{"id":"doi:10.1093/bib/bbaf308","is_oa":true,"landing_page_url":"https://doi.org/10.1093/bib/bbaf308","pdf_url":"https://academic.oup.com/bib/article-pdf/26/4/bbaf308/63773182/bbaf308.pdf","source":{"id":"https://openalex.org/S91767247","display_name":"Briefings in Bioinformatics","issn_l":"1467-5463","issn":["1467-5463","1477-4054"],"is_oa":true,"is_in_doaj":true,"is_core":true,"host_organization":"https://openalex.org/P4310311648","host_organization_name":"Oxford University Press","host_organization_lineage":["https://openalex.org/P4310311648","https://openalex.org/P4310311647"],"host_organization_lineage_names":["Oxford University Press","University of Oxford"],"type":"journal"},"license":"cc-by","license_id":"https://openalex.org/licenses/cc-by","version":"publishedVersion","is_accepted":true,"is_published":true,"raw_source_name":"Briefings in Bioinformatics","raw_type":"journal-article"},"sustainable_development_goals":[{"display_name":"Good health and well-being","score":0.7599999904632568,"id":"https://metadata.un.org/sdg/3"}],"awards":[],"funders":[],"has_content":{"grobid_xml":true,"pdf":true},"content_urls":{"pdf":"https://content.openalex.org/works/W4412487449.pdf","grobid_xml":"https://content.openalex.org/works/W4412487449.grobid-xml"},"referenced_works_count":51,"referenced_works":["https://openalex.org/W1480714608","https://openalex.org/W1655175605","https://openalex.org/W1979158913","https://openalex.org/W1986595817","https://openalex.org/W2006010216","https://openalex.org/W2036236122","https://openalex.org/W2078927190","https://openalex.org/W2105329815","https://openalex.org/W2106159290","https://openalex.org/W2127890221","https://openalex.org/W2148594363","https://openalex.org/W2158189516","https://openalex.org/W2170747616","https://openalex.org/W2171288396","https://openalex.org/W2264077953","https://openalex.org/W2329310459","https://openalex.org/W2408947740","https://openalex.org/W2509094238","https://openalex.org/W2587183882","https://openalex.org/W2605343262","https://openalex.org/W2610635081","https://openalex.org/W2765549458","https://openalex.org/W2767495920","https://openalex.org/W2902652978","https://openalex.org/W2921220897","https://openalex.org/W2979405251","https://openalex.org/W3007525093","https://openalex.org/W3045976236","https://openalex.org/W3047337336","https://openalex.org/W3048804154","https://openalex.org/W3086408717","https://openalex.org/W3095531782","https://openalex.org/W3114116987","https://openalex.org/W3117882517","https://openalex.org/W3197505096","https://openalex.org/W3206290051","https://openalex.org/W4225460848","https://openalex.org/W4225551193","https://openalex.org/W4311204468","https://openalex.org/W4327550249","https://openalex.org/W4385997203","https://openalex.org/W4389262217","https://openalex.org/W4389266330","https://openalex.org/W4391758720","https://openalex.org/W4396688560","https://openalex.org/W4396709132","https://openalex.org/W4404189988","https://openalex.org/W4404437513","https://openalex.org/W4404764874","https://openalex.org/W4405079398","https://openalex.org/W6756278701"],"related_works":["https://openalex.org/W2061095809","https://openalex.org/W2483343817","https://openalex.org/W2054327131","https://openalex.org/W1512806282","https://openalex.org/W2406460005","https://openalex.org/W1979537384","https://openalex.org/W2903366468","https://openalex.org/W2006667246","https://openalex.org/W1546752353","https://openalex.org/W134307878"],"abstract_inverted_index":{"Influenza":[0],"poses":[1],"a":[2,72,216,238],"significant":[3],"global":[4],"public":[5],"health":[6],"threat,":[7],"with":[8,96,168],"vaccination":[9],"being":[10],"the":[11,30,46,146,154,177,183],"most":[12],"effective":[13],"and":[14,44,100,104,116,153,180,206],"economical":[15],"preventive":[16],"measure.":[17],"However,":[18],"these":[19],"punctuated":[20],"antigenic":[21,42,47,108,133,141,151,159,209,220,226],"changes,":[22],"particularly":[23],"in":[24,27,87,131,135,228],"HA,":[25],"result":[26],"escape":[28],"from":[29,113,198],"immunity":[31],"that":[32,77],"was":[33],"induced":[34],"by":[35],"prior":[36],"infection":[37],"or":[38],"vaccination.":[39],"Accurately":[40],"predicting":[41,132,225],"variation":[43,134,210,227],"understanding":[45],"dynamics":[48],"of":[49,174,223],"influenza":[50,65,119,136,229,245],"viruses":[51],"are":[52],"crucial":[53],"for":[54,64,107,164,190,219,242],"selecting":[55],"appropriate":[56],"vaccine":[57,246],"strains,":[58],"but":[59],"no":[60],"established":[61],"methods":[62,130],"exist":[63],"B":[66,230],"viruses.":[67,231],"Therefore,":[68],"we":[69],"present":[70],"PREDAC-FluB,":[71],"hybrid":[73],"deep":[74],"learning":[75,129],"framework":[76],"integrates":[78],"spatial":[79],"feature":[80],"extraction":[81],"via":[82],"CNN":[83],"to":[84,200],"model":[85],"interactions":[86],"HA1":[88],"sequences,":[89],"multimodal":[90],"sequence":[91],"representation":[92],"combining":[93],"ESM-2":[94],"embeddings":[95],"six":[97],"physicochemical":[98],"descriptors":[99],"continuous":[101],"encoding":[102,170],"(ESM2-7-features),":[103],"UMAP-guided":[105],"clustering":[106],"cluster":[109],"identification.":[110],"Using":[111],"data":[112],"9036":[114],"B/Victoria-lineage":[115],"4520":[117],"B/Yamagata-lineage":[118],"virus":[120],"pair.":[121],"PREDAC-FluB":[122,144,167,193,214],"demonstrates":[123],"superior":[124],"performance":[125],"over":[126],"traditional":[127],"machine":[128],"viruses,":[137,166,192],"successfully":[138],"identifying":[139],"major":[140],"clusters.":[142,160],"Specifically,":[143],"classified":[145],"B/Victoria":[147,165,191],"lineage":[148,156],"into":[149,157],"nine":[150],"clusters":[152],"B/Yamagata":[155],"three":[158],"In":[161,187,212],"five-fold":[162],"cross-validation":[163],"ESM2-7-features":[169],"achieved":[171,194],"AUROC":[172,195],"values":[173,196],"0.9961":[175],"on":[176,182],"validation":[178],"set":[179],"0.9856":[181],"independent":[184],"test":[185],"set.":[186],"retrospective":[188],"testing":[189],"ranging":[197],"0.83":[199],"0.97,":[201],"demonstrating":[202],"high":[203,233],"prediction":[204,234],"accuracy":[205,235],"effectively":[207],"capturing":[208],"information.":[211],"conclusion,":[213],"is":[215],"robust":[217],"tool":[218],"computation,":[221],"capable":[222],"accurately":[224],"Its":[232],"makes":[236],"it":[237],"promising":[239],"auxiliary":[240],"method":[241],"recommending":[243],"future":[244],"strains.":[247]},"counts_by_year":[{"year":2025,"cited_by_count":1}],"updated_date":"2026-04-21T08:09:41.155169","created_date":"2025-10-10T00:00:00"}
