{"id":"https://openalex.org/W4411622985","doi":"https://doi.org/10.1093/bib/bbaf283","title":"IECata: interpretable bilinear attention network and evidential deep learning improve the catalytic efficiency prediction of enzymes","display_name":"IECata: interpretable bilinear attention network and evidential deep learning improve the catalytic efficiency prediction of enzymes","publication_year":2025,"publication_date":"2025-05-01","ids":{"openalex":"https://openalex.org/W4411622985","doi":"https://doi.org/10.1093/bib/bbaf283","pmid":"https://pubmed.ncbi.nlm.nih.gov/40548541"},"language":"en","primary_location":{"id":"doi:10.1093/bib/bbaf283","is_oa":true,"landing_page_url":"https://doi.org/10.1093/bib/bbaf283","pdf_url":"https://academic.oup.com/bib/article-pdf/26/3/bbaf283/63547437/bbaf283.pdf","source":{"id":"https://openalex.org/S91767247","display_name":"Briefings in Bioinformatics","issn_l":"1467-5463","issn":["1467-5463","1477-4054"],"is_oa":true,"is_in_doaj":true,"is_core":true,"host_organization":"https://openalex.org/P4310311648","host_organization_name":"Oxford University Press","host_organization_lineage":["https://openalex.org/P4310311648","https://openalex.org/P4310311647"],"host_organization_lineage_names":["Oxford University Press","University of Oxford"],"type":"journal"},"license":"cc-by","license_id":"https://openalex.org/licenses/cc-by","version":"publishedVersion","is_accepted":true,"is_published":true,"raw_source_name":"Briefings in Bioinformatics","raw_type":"journal-article"},"type":"article","indexed_in":["crossref","doaj","pubmed"],"open_access":{"is_oa":true,"oa_status":"gold","oa_url":"https://academic.oup.com/bib/article-pdf/26/3/bbaf283/63547437/bbaf283.pdf","any_repository_has_fulltext":true},"authorships":[{"author_position":"first","author":{"id":"https://openalex.org/A5114804032","display_name":"Jingjing Wang","orcid":"https://orcid.org/0009-0008-2115-5454"},"institutions":[],"countries":[],"is_corresponding":false,"raw_author_name":"Jingjing Wang","raw_affiliation_strings":["State Key Laboratory of NBC Protection for Civilian , No. 37, South Central Street, Changping District, Beijing 102205 ,"],"raw_orcid":null,"affiliations":[{"raw_affiliation_string":"State Key Laboratory of NBC Protection for Civilian , No. 37, South Central Street, Changping District, Beijing 102205 ,","institution_ids":[]}]},{"author_position":"middle","author":{"id":"https://openalex.org/A5101794413","display_name":"Yanpeng Zhao","orcid":"https://orcid.org/0000-0002-2117-630X"},"institutions":[{"id":"https://openalex.org/I113940042","display_name":"Shanghai University","ror":"https://ror.org/006teas31","country_code":"CN","type":"education","lineage":["https://openalex.org/I113940042"]},{"id":"https://openalex.org/I2802541053","display_name":"Academy of Military Medical Sciences","ror":"https://ror.org/02bv3c993","country_code":"CN","type":"facility","lineage":["https://openalex.org/I2802541053"]}],"countries":["CN"],"is_corresponding":false,"raw_author_name":"Yanpeng Zhao","raw_affiliation_strings":["Academy of Military Medical Sciences , No. 27, Taiping Road, Haidian District, Beijing 100039 ,","School of Medicine, Shanghai University , No. 99, Shangda Road, Baoshan District, Shanghai 200444 ,"],"raw_orcid":null,"affiliations":[{"raw_affiliation_string":"Academy of Military Medical Sciences , No. 27, Taiping Road, Haidian District, Beijing 100039 ,","institution_ids":["https://openalex.org/I2802541053"]},{"raw_affiliation_string":"School of Medicine, Shanghai University , No. 99, Shangda Road, Baoshan District, Shanghai 200444 ,","institution_ids":["https://openalex.org/I113940042"]}]},{"author_position":"middle","author":{"id":"https://openalex.org/A5112896065","display_name":"Zhijiang Yang","orcid":null},"institutions":[],"countries":[],"is_corresponding":false,"raw_author_name":"Zhijiang Yang","raw_affiliation_strings":["State Key Laboratory of NBC Protection for Civilian , No. 37, South Central Street, Changping District, Beijing 102205 ,"],"raw_orcid":null,"affiliations":[{"raw_affiliation_string":"State Key Laboratory of NBC Protection for Civilian , No. 37, South Central Street, Changping District, Beijing 102205 ,","institution_ids":[]}]},{"author_position":"middle","author":{"id":"https://openalex.org/A5101940769","display_name":"Yao Ge","orcid":"https://orcid.org/0000-0001-6314-3891"},"institutions":[],"countries":[],"is_corresponding":false,"raw_author_name":"Ge Yao","raw_affiliation_strings":["State Key Laboratory of NBC Protection for Civilian , No. 37, South Central Street, Changping District, Beijing 102205 ,"],"raw_orcid":null,"affiliations":[{"raw_affiliation_string":"State Key Laboratory of NBC Protection for Civilian , No. 37, South Central Street, Changping District, Beijing 102205 ,","institution_ids":[]}]},{"author_position":"middle","author":{"id":"https://openalex.org/A5060057051","display_name":"Penggang Han","orcid":null},"institutions":[],"countries":[],"is_corresponding":false,"raw_author_name":"Penggang Han","raw_affiliation_strings":["State Key Laboratory of NBC Protection for Civilian , No. 37, South Central Street, Changping District, Beijing 102205 ,"],"raw_orcid":null,"affiliations":[{"raw_affiliation_string":"State Key Laboratory of NBC Protection for Civilian , No. 37, South Central Street, Changping District, Beijing 102205 ,","institution_ids":[]}]},{"author_position":"middle","author":{"id":"https://openalex.org/A5100454283","display_name":"Jiajia Liu","orcid":"https://orcid.org/0000-0002-1944-0829"},"institutions":[],"countries":[],"is_corresponding":false,"raw_author_name":"Jiajia Liu","raw_affiliation_strings":["State Key Laboratory of NBC Protection for Civilian , No. 37, South Central Street, Changping District, Beijing 102205 ,"],"raw_orcid":null,"affiliations":[{"raw_affiliation_string":"State Key Laboratory of NBC Protection for Civilian , No. 37, South Central Street, Changping District, Beijing 102205 ,","institution_ids":[]}]},{"author_position":"middle","author":{"id":"https://openalex.org/A5100449495","display_name":"Chang Chen","orcid":"https://orcid.org/0000-0003-1008-1062"},"institutions":[],"countries":[],"is_corresponding":false,"raw_author_name":"Chang Chen","raw_affiliation_strings":["State Key Laboratory of NBC Protection for Civilian , No. 37, South Central Street, Changping District, Beijing 102205 ,"],"raw_orcid":null,"affiliations":[{"raw_affiliation_string":"State Key Laboratory of NBC Protection for Civilian , No. 37, South Central Street, Changping District, Beijing 102205 ,","institution_ids":[]}]},{"author_position":"middle","author":{"id":"https://openalex.org/A5077847021","display_name":"Peng Zan","orcid":"https://orcid.org/0000-0003-2588-2188"},"institutions":[{"id":"https://openalex.org/I113940042","display_name":"Shanghai University","ror":"https://ror.org/006teas31","country_code":"CN","type":"education","lineage":["https://openalex.org/I113940042"]}],"countries":["CN"],"is_corresponding":true,"raw_author_name":"Peng Zan","raw_affiliation_strings":["Shanghai Key Laboratory of Power Station Automation Technology, School of Mechatronics Engineering and Automation, Shanghai University , No. 99, Shangda Road, Baoshan District, Shanghai 200444 ,"],"raw_orcid":null,"affiliations":[{"raw_affiliation_string":"Shanghai Key Laboratory of Power Station Automation Technology, School of Mechatronics Engineering and Automation, Shanghai University , No. 99, Shangda Road, Baoshan District, Shanghai 200444 ,","institution_ids":["https://openalex.org/I113940042"]}]},{"author_position":"middle","author":{"id":"https://openalex.org/A5048753990","display_name":"Xiukun Wan","orcid":"https://orcid.org/0000-0001-8309-250X"},"institutions":[],"countries":[],"is_corresponding":true,"raw_author_name":"Xiukun Wan","raw_affiliation_strings":["State Key Laboratory of NBC Protection for Civilian , No. 37, South Central Street, Changping District, Beijing 102205 ,"],"raw_orcid":null,"affiliations":[{"raw_affiliation_string":"State Key Laboratory of NBC Protection for Civilian , No. 37, South Central Street, Changping District, Beijing 102205 ,","institution_ids":[]}]},{"author_position":"middle","author":{"id":"https://openalex.org/A5045958734","display_name":"Xiaochen Bo","orcid":"https://orcid.org/0000-0003-1911-7922"},"institutions":[{"id":"https://openalex.org/I2802541053","display_name":"Academy of Military Medical Sciences","ror":"https://ror.org/02bv3c993","country_code":"CN","type":"facility","lineage":["https://openalex.org/I2802541053"]}],"countries":["CN"],"is_corresponding":true,"raw_author_name":"Xiaochen Bo","raw_affiliation_strings":["Academy of Military Medical Sciences , No. 27, Taiping Road, Haidian District, Beijing 100039 ,"],"raw_orcid":null,"affiliations":[{"raw_affiliation_string":"Academy of Military Medical Sciences , No. 27, Taiping Road, Haidian District, Beijing 100039 ,","institution_ids":["https://openalex.org/I2802541053"]}]},{"author_position":"last","author":{"id":"https://openalex.org/A5100742764","display_name":"Hui Jiang","orcid":"https://orcid.org/0000-0002-4534-1322"},"institutions":[],"countries":[],"is_corresponding":true,"raw_author_name":"Hui Jiang","raw_affiliation_strings":["State Key Laboratory of NBC Protection for Civilian , No. 37, South Central Street, Changping District, Beijing 102205 ,"],"raw_orcid":null,"affiliations":[{"raw_affiliation_string":"State Key Laboratory of NBC Protection for Civilian , No. 37, South Central Street, Changping District, Beijing 102205 ,","institution_ids":[]}]}],"institutions":[],"countries_distinct_count":1,"institutions_distinct_count":2,"corresponding_author_ids":["https://openalex.org/A5045958734","https://openalex.org/A5048753990","https://openalex.org/A5077847021","https://openalex.org/A5100742764"],"corresponding_institution_ids":["https://openalex.org/I113940042","https://openalex.org/I2802541053"],"apc_list":{"value":4011,"currency":"USD","value_usd":4011},"apc_paid":{"value":4011,"currency":"USD","value_usd":4011},"fwci":3.7282,"has_fulltext":true,"cited_by_count":5,"citation_normalized_percentile":{"value":0.93785972,"is_in_top_1_percent":false,"is_in_top_10_percent":true},"cited_by_percentile_year":{"min":98,"max":99},"biblio":{"volume":"26","issue":"3","first_page":null,"last_page":null},"is_retracted":false,"is_paratext":false,"is_xpac":false,"primary_topic":{"id":"https://openalex.org/T10211","display_name":"Computational Drug Discovery Methods","score":0.9980000257492065,"subfield":{"id":"https://openalex.org/subfields/1703","display_name":"Computational Theory and Mathematics"},"field":{"id":"https://openalex.org/fields/17","display_name":"Computer Science"},"domain":{"id":"https://openalex.org/domains/3","display_name":"Physical Sciences"}},"topics":[{"id":"https://openalex.org/T10211","display_name":"Computational Drug Discovery Methods","score":0.9980000257492065,"subfield":{"id":"https://openalex.org/subfields/1703","display_name":"Computational Theory and Mathematics"},"field":{"id":"https://openalex.org/fields/17","display_name":"Computer Science"},"domain":{"id":"https://openalex.org/domains/3","display_name":"Physical Sciences"}},{"id":"https://openalex.org/T11948","display_name":"Machine Learning in Materials Science","score":0.9980000257492065,"subfield":{"id":"https://openalex.org/subfields/2505","display_name":"Materials Chemistry"},"field":{"id":"https://openalex.org/fields/25","display_name":"Materials Science"},"domain":{"id":"https://openalex.org/domains/3","display_name":"Physical Sciences"}},{"id":"https://openalex.org/T10404","display_name":"Enzyme Catalysis and Immobilization","score":0.9861000180244446,"subfield":{"id":"https://openalex.org/subfields/1312","display_name":"Molecular Biology"},"field":{"id":"https://openalex.org/fields/13","display_name":"Biochemistry, Genetics and Molecular Biology"},"domain":{"id":"https://openalex.org/domains/1","display_name":"Life Sciences"}}],"keywords":[{"id":"https://openalex.org/keywords/enzyme-kinetics","display_name":"Enzyme kinetics","score":0.8136228322982788},{"id":"https://openalex.org/keywords/interpretability","display_name":"Interpretability","score":0.6452423930168152},{"id":"https://openalex.org/keywords/benchmark","display_name":"Benchmark (surveying)","score":0.61287522315979},{"id":"https://openalex.org/keywords/computer-science","display_name":"Computer science","score":0.6068943738937378},{"id":"https://openalex.org/keywords/artificial-intelligence","display_name":"Artificial intelligence","score":0.5506828427314758},{"id":"https://openalex.org/keywords/machine-learning","display_name":"Machine learning","score":0.490762323141098},{"id":"https://openalex.org/keywords/chemistry","display_name":"Chemistry","score":0.27888160943984985},{"id":"https://openalex.org/keywords/enzyme","display_name":"Enzyme","score":0.19435930252075195},{"id":"https://openalex.org/keywords/active-site","display_name":"Active site","score":0.11954405903816223}],"concepts":[{"id":"https://openalex.org/C56856141","wikidata":"https://www.wikidata.org/wiki/Q883112","display_name":"Enzyme kinetics","level":4,"score":0.8136228322982788},{"id":"https://openalex.org/C2781067378","wikidata":"https://www.wikidata.org/wiki/Q17027399","display_name":"Interpretability","level":2,"score":0.6452423930168152},{"id":"https://openalex.org/C185798385","wikidata":"https://www.wikidata.org/wiki/Q1161707","display_name":"Benchmark (surveying)","level":2,"score":0.61287522315979},{"id":"https://openalex.org/C41008148","wikidata":"https://www.wikidata.org/wiki/Q21198","display_name":"Computer science","level":0,"score":0.6068943738937378},{"id":"https://openalex.org/C154945302","wikidata":"https://www.wikidata.org/wiki/Q11660","display_name":"Artificial intelligence","level":1,"score":0.5506828427314758},{"id":"https://openalex.org/C119857082","wikidata":"https://www.wikidata.org/wiki/Q2539","display_name":"Machine learning","level":1,"score":0.490762323141098},{"id":"https://openalex.org/C185592680","wikidata":"https://www.wikidata.org/wiki/Q2329","display_name":"Chemistry","level":0,"score":0.27888160943984985},{"id":"https://openalex.org/C181199279","wikidata":"https://www.wikidata.org/wiki/Q8047","display_name":"Enzyme","level":2,"score":0.19435930252075195},{"id":"https://openalex.org/C41183919","wikidata":"https://www.wikidata.org/wiki/Q423026","display_name":"Active site","level":3,"score":0.11954405903816223},{"id":"https://openalex.org/C205649164","wikidata":"https://www.wikidata.org/wiki/Q1071","display_name":"Geography","level":0,"score":0.0},{"id":"https://openalex.org/C55493867","wikidata":"https://www.wikidata.org/wiki/Q7094","display_name":"Biochemistry","level":1,"score":0.0},{"id":"https://openalex.org/C13280743","wikidata":"https://www.wikidata.org/wiki/Q131089","display_name":"Geodesy","level":1,"score":0.0}],"mesh":[{"descriptor_ui":"D000077321","descriptor_name":"Deep Learning","qualifier_ui":null,"qualifier_name":null,"is_major_topic":true},{"descriptor_ui":"D000077321","descriptor_name":"Deep Learning","qualifier_ui":null,"qualifier_name":null,"is_major_topic":true},{"descriptor_ui":"D000077321","descriptor_name":"Deep Learning","qualifier_ui":null,"qualifier_name":null,"is_major_topic":true},{"descriptor_ui":"D000077321","descriptor_name":"Deep Learning","qualifier_ui":null,"qualifier_name":null,"is_major_topic":true},{"descriptor_ui":"D002384","descriptor_name":"Catalysis","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D002384","descriptor_name":"Catalysis","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D002384","descriptor_name":"Catalysis","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D002384","descriptor_name":"Catalysis","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D004798","descriptor_name":"Enzymes","qualifier_ui":"Q000378","qualifier_name":"metabolism","is_major_topic":true},{"descriptor_ui":"D004798","descriptor_name":"Enzymes","qualifier_ui":"Q000378","qualifier_name":"metabolism","is_major_topic":true},{"descriptor_ui":"D004798","descriptor_name":"Enzymes","qualifier_ui":"Q000378","qualifier_name":"metabolism","is_major_topic":true},{"descriptor_ui":"D004798","descriptor_name":"Enzymes","qualifier_ui":"Q000378","qualifier_name":"metabolism","is_major_topic":true},{"descriptor_ui":"D004798","descriptor_name":"Enzymes","qualifier_ui":"Q000737","qualifier_name":"chemistry","is_major_topic":true},{"descriptor_ui":"D004798","descriptor_name":"Enzymes","qualifier_ui":"Q000737","qualifier_name":"chemistry","is_major_topic":true},{"descriptor_ui":"D004798","descriptor_name":"Enzymes","qualifier_ui":"Q000737","qualifier_name":"chemistry","is_major_topic":true},{"descriptor_ui":"D004798","descriptor_name":"Enzymes","qualifier_ui":"Q000737","qualifier_name":"chemistry","is_major_topic":true},{"descriptor_ui":"D007700","descriptor_name":"Kinetics","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D007700","descriptor_name":"Kinetics","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D007700","descriptor_name":"Kinetics","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D007700","descriptor_name":"Kinetics","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D019295","descriptor_name":"Computational Biology","qualifier_ui":"Q000379","qualifier_name":"methods","is_major_topic":true},{"descriptor_ui":"D019295","descriptor_name":"Computational Biology","qualifier_ui":"Q000379","qualifier_name":"methods","is_major_topic":true},{"descriptor_ui":"D019295","descriptor_name":"Computational Biology","qualifier_ui":"Q000379","qualifier_name":"methods","is_major_topic":true},{"descriptor_ui":"D019295","descriptor_name":"Computational Biology","qualifier_ui":"Q000379","qualifier_name":"methods","is_major_topic":true},{"descriptor_ui":"D030562","descriptor_name":"Databases, Protein","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D030562","descriptor_name":"Databases, Protein","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D030562","descriptor_name":"Databases, Protein","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D030562","descriptor_name":"Databases, Protein","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D055162","descriptor_name":"Biocatalysis","qualifier_ui":null,"qualifier_name":null,"is_major_topic":true},{"descriptor_ui":"D055162","descriptor_name":"Biocatalysis","qualifier_ui":null,"qualifier_name":null,"is_major_topic":true},{"descriptor_ui":"D055162","descriptor_name":"Biocatalysis","qualifier_ui":null,"qualifier_name":null,"is_major_topic":true},{"descriptor_ui":"D055162","descriptor_name":"Biocatalysis","qualifier_ui":null,"qualifier_name":null,"is_major_topic":true}],"locations_count":3,"locations":[{"id":"doi:10.1093/bib/bbaf283","is_oa":true,"landing_page_url":"https://doi.org/10.1093/bib/bbaf283","pdf_url":"https://academic.oup.com/bib/article-pdf/26/3/bbaf283/63547437/bbaf283.pdf","source":{"id":"https://openalex.org/S91767247","display_name":"Briefings in Bioinformatics","issn_l":"1467-5463","issn":["1467-5463","1477-4054"],"is_oa":true,"is_in_doaj":true,"is_core":true,"host_organization":"https://openalex.org/P4310311648","host_organization_name":"Oxford University Press","host_organization_lineage":["https://openalex.org/P4310311648","https://openalex.org/P4310311647"],"host_organization_lineage_names":["Oxford University Press","University of Oxford"],"type":"journal"},"license":"cc-by","license_id":"https://openalex.org/licenses/cc-by","version":"publishedVersion","is_accepted":true,"is_published":true,"raw_source_name":"Briefings in Bioinformatics","raw_type":"journal-article"},{"id":"pmid:40548541","is_oa":false,"landing_page_url":"https://pubmed.ncbi.nlm.nih.gov/40548541","pdf_url":null,"source":{"id":"https://openalex.org/S4306525036","display_name":"PubMed","issn_l":null,"issn":null,"is_oa":false,"is_in_doaj":false,"is_core":false,"host_organization":"https://openalex.org/I1299303238","host_organization_name":"National Institutes of Health","host_organization_lineage":["https://openalex.org/I1299303238"],"host_organization_lineage_names":[],"type":"repository"},"license":null,"license_id":null,"version":"publishedVersion","is_accepted":true,"is_published":true,"raw_source_name":"Briefings in bioinformatics","raw_type":null},{"id":"pmh:oai:europepmc.org:11013156","is_oa":true,"landing_page_url":"https://www.ncbi.nlm.nih.gov/pmc/articles/12205960","pdf_url":null,"source":{"id":"https://openalex.org/S4306400806","display_name":"Europe PMC (PubMed Central)","issn_l":null,"issn":null,"is_oa":false,"is_in_doaj":false,"is_core":false,"host_organization":"https://openalex.org/I1303153112","host_organization_name":"European Bioinformatics Institute","host_organization_lineage":["https://openalex.org/I1303153112"],"host_organization_lineage_names":[],"type":"repository"},"license":"cc-by","license_id":"https://openalex.org/licenses/cc-by","version":"submittedVersion","is_accepted":false,"is_published":false,"raw_source_name":null,"raw_type":"Text"}],"best_oa_location":{"id":"doi:10.1093/bib/bbaf283","is_oa":true,"landing_page_url":"https://doi.org/10.1093/bib/bbaf283","pdf_url":"https://academic.oup.com/bib/article-pdf/26/3/bbaf283/63547437/bbaf283.pdf","source":{"id":"https://openalex.org/S91767247","display_name":"Briefings in Bioinformatics","issn_l":"1467-5463","issn":["1467-5463","1477-4054"],"is_oa":true,"is_in_doaj":true,"is_core":true,"host_organization":"https://openalex.org/P4310311648","host_organization_name":"Oxford University Press","host_organization_lineage":["https://openalex.org/P4310311648","https://openalex.org/P4310311647"],"host_organization_lineage_names":["Oxford University Press","University of Oxford"],"type":"journal"},"license":"cc-by","license_id":"https://openalex.org/licenses/cc-by","version":"publishedVersion","is_accepted":true,"is_published":true,"raw_source_name":"Briefings in Bioinformatics","raw_type":"journal-article"},"sustainable_development_goals":[],"awards":[{"id":"https://openalex.org/G4399057756","display_name":null,"funder_award_id":"32300066","funder_id":"https://openalex.org/F4320321001","funder_display_name":"National Natural Science Foundation of China"}],"funders":[{"id":"https://openalex.org/F4320321001","display_name":"National Natural Science Foundation of China","ror":"https://ror.org/01h0zpd94"}],"has_content":{"pdf":true,"grobid_xml":true},"content_urls":{"pdf":"https://content.openalex.org/works/W4411622985.pdf","grobid_xml":"https://content.openalex.org/works/W4411622985.grobid-xml"},"referenced_works_count":86,"referenced_works":["https://openalex.org/W1536719639","https://openalex.org/W1608474681","https://openalex.org/W1954202239","https://openalex.org/W1992306108","https://openalex.org/W2014252525","https://openalex.org/W2035648603","https://openalex.org/W2093785124","https://openalex.org/W2225156818","https://openalex.org/W2267190997","https://openalex.org/W2330673149","https://openalex.org/W2465827566","https://openalex.org/W2747623286","https://openalex.org/W2766958291","https://openalex.org/W2860192827","https://openalex.org/W2903357856","https://openalex.org/W2948273381","https://openalex.org/W2962851448","https://openalex.org/W2963521239","https://openalex.org/W2964015378","https://openalex.org/W2969220209","https://openalex.org/W2997129641","https://openalex.org/W3012035124","https://openalex.org/W3097145107","https://openalex.org/W3100019193","https://openalex.org/W3102100346","https://openalex.org/W3105895642","https://openalex.org/W3117395210","https://openalex.org/W3138705992","https://openalex.org/W3145682503","https://openalex.org/W3163842339","https://openalex.org/W3164731060","https://openalex.org/W3164955996","https://openalex.org/W3172962647","https://openalex.org/W3177500196","https://openalex.org/W3185456481","https://openalex.org/W3207760869","https://openalex.org/W3211569837","https://openalex.org/W4200115265","https://openalex.org/W4211145346","https://openalex.org/W4212883601","https://openalex.org/W4229013123","https://openalex.org/W4242765109","https://openalex.org/W4283032119","https://openalex.org/W4283461557","https://openalex.org/W4286508612","https://openalex.org/W4297138475","https://openalex.org/W4307171284","https://openalex.org/W4308019830","https://openalex.org/W4309506674","https://openalex.org/W4312209965","https://openalex.org/W4317542939","https://openalex.org/W4318981550","https://openalex.org/W4320033046","https://openalex.org/W4323543272","https://openalex.org/W4360745473","https://openalex.org/W4362657458","https://openalex.org/W4376601927","https://openalex.org/W4383341169","https://openalex.org/W4384023735","https://openalex.org/W4385490607","https://openalex.org/W4386570221","https://openalex.org/W4388891993","https://openalex.org/W4389193156","https://openalex.org/W4389370975","https://openalex.org/W4389546039","https://openalex.org/W4390035122","https://openalex.org/W4390678097","https://openalex.org/W4393278067","https://openalex.org/W4394766668","https://openalex.org/W4401526016","https://openalex.org/W4401715368","https://openalex.org/W4401911498","https://openalex.org/W4402089112","https://openalex.org/W4403616579","https://openalex.org/W4408184079","https://openalex.org/W4409122431","https://openalex.org/W4410864355","https://openalex.org/W4410872642","https://openalex.org/W4410888026","https://openalex.org/W6636273849","https://openalex.org/W6693722824","https://openalex.org/W6726873649","https://openalex.org/W6752083267","https://openalex.org/W6768698167","https://openalex.org/W6803759081","https://openalex.org/W6839057656"],"related_works":["https://openalex.org/W2961085424","https://openalex.org/W4306674287","https://openalex.org/W4387369504","https://openalex.org/W4394896187","https://openalex.org/W3170094116","https://openalex.org/W4386462264","https://openalex.org/W3107602296","https://openalex.org/W4364306694","https://openalex.org/W4312192474","https://openalex.org/W4283697347"],"abstract_inverted_index":{"Enzyme":[0],"catalytic":[1],"efficiency":[2,194],"(kcat/Km)":[3],"is":[4],"a":[5,70,82,122,163],"key":[6,136],"parameter":[7],"for":[8,20,116,167,181],"identifying":[9],"high-activity":[10],"enzymes.":[11],"Recently,":[12],"deep":[13,43,110],"learning":[14,44,129],"techniques":[15],"have":[16,210],"demonstrated":[17],"the":[18,31,35,40,47,90,105,135,148,175,188,193],"potential":[19],"fast":[21],"and":[22,54,78,92,138,198],"accurate":[23],"kcat/Km":[24,37,71,87,117],"prediction.":[25],"However,":[26],"three":[27],"challenges":[28],"remain:":[29],"(i)":[30],"limited":[32],"size":[33],"of":[34,42,84,101,151,155,177,195,207],"available":[36],"dataset":[38,83,100],"hinders":[39],"development":[41],"models;":[45],"(ii)":[46],"model":[48,73],"predictions":[49],"lack":[50,57],"reliable":[51,164],"confidence":[52,165],"estimates;":[53],"(iii)":[55],"models":[56],"interpretable":[58],"insights":[59],"into":[60],"enzyme-catalyzed":[61,142],"reactions.":[62,143],"To":[63,203],"address":[64],"these":[65,168],"challenges,":[66],"we":[67,209],"proposed":[68],"IECata,":[69,208],"prediction":[72,149,214],"that":[74,147,154,174],"provides":[75,113,162],"uncertainty":[76,114,178],"estimation":[77],"interpretability.":[79],"IECata":[80,112,152],"collected":[81],"11":[85],"815":[86],"entries":[88,103],"from":[89,104],"BRENDA":[91],"SABIO-RK":[93],"databases,":[94],"along":[95],"with":[96],"an":[97,212],"out-of-domain":[98],"test":[99],"806":[102],"literature.":[106],"By":[107],"introducing":[108],"evidential":[109],"learning,":[111],"estimates":[115],"predictions.":[118,169],"Moreover,":[119],"it":[120,161],"uses":[121],"bilinear":[123],"attention":[124],"mechanism":[125],"to":[126,133],"focus":[127],"on":[128],"crucial":[130],"local":[131],"interactions":[132],"interpret":[134],"residues":[137],"substrate":[139],"atoms":[140],"in":[141,179],"Testing":[144],"results":[145],"indicate":[146],"performance":[150],"exceeds":[153],"state-of-the-art":[156],"benchmark":[157],"models.":[158],"More":[159],"importantly,":[160],"assessment":[166],"Case":[170],"studies":[171],"further":[172],"highlight":[173],"incorporation":[176],"screening":[180],"highly":[182],"active":[183],"enzymes":[184],"can":[185],"effectively":[186],"increase":[187],"hit":[189],"ratio,":[190],"thereby":[191],"improving":[192],"experimental":[196],"validation":[197],"accelerating":[199],"directed":[200],"enzyme":[201],"evolution.":[202],"facilitate":[204],"researchers'":[205],"use":[206],"developed":[211],"online":[213],"platform:":[215],"http://mathtc.nscc-tj.cn/cataai/.":[216]},"counts_by_year":[{"year":2026,"cited_by_count":5}],"updated_date":"2026-07-30T17:31:21.811387","created_date":"2025-10-10T00:00:00"}
