{"id":"https://openalex.org/W4410419158","doi":"https://doi.org/10.1093/bib/bbaf198","title":"Decoupled GNNs based on multi-view contrastive learning for scRNA-seq data clustering","display_name":"Decoupled GNNs based on multi-view contrastive learning for scRNA-seq data clustering","publication_year":2025,"publication_date":"2025-05-01","ids":{"openalex":"https://openalex.org/W4410419158","doi":"https://doi.org/10.1093/bib/bbaf198","pmid":"https://pubmed.ncbi.nlm.nih.gov/40366859"},"language":"en","primary_location":{"id":"doi:10.1093/bib/bbaf198","is_oa":true,"landing_page_url":"https://doi.org/10.1093/bib/bbaf198","pdf_url":"https://academic.oup.com/bib/article-pdf/26/3/bbaf198/63180757/bbaf198.pdf","source":{"id":"https://openalex.org/S91767247","display_name":"Briefings in Bioinformatics","issn_l":"1467-5463","issn":["1467-5463","1477-4054"],"is_oa":true,"is_in_doaj":true,"is_core":true,"host_organization":"https://openalex.org/P4310311648","host_organization_name":"Oxford University Press","host_organization_lineage":["https://openalex.org/P4310311648","https://openalex.org/P4310311647"],"host_organization_lineage_names":["Oxford University Press","University of Oxford"],"type":"journal"},"license":"cc-by-nc","license_id":"https://openalex.org/licenses/cc-by-nc","version":"publishedVersion","is_accepted":true,"is_published":true,"raw_source_name":"Briefings in Bioinformatics","raw_type":"journal-article"},"type":"article","indexed_in":["crossref","doaj","pubmed"],"open_access":{"is_oa":true,"oa_status":"gold","oa_url":"https://academic.oup.com/bib/article-pdf/26/3/bbaf198/63180757/bbaf198.pdf","any_repository_has_fulltext":true},"authorships":[{"author_position":"first","author":{"id":"https://openalex.org/A5101273937","display_name":"Xiaoyan Yu","orcid":"https://orcid.org/0009-0006-2314-7867"},"institutions":[{"id":"https://openalex.org/I125839683","display_name":"Beijing Institute of Technology","ror":"https://ror.org/01skt4w74","country_code":"CN","type":"education","lineage":["https://openalex.org/I125839683","https://openalex.org/I890469752"]}],"countries":["CN"],"is_corresponding":true,"raw_author_name":"Xiaoyan Yu","raw_affiliation_strings":["School of Computer Science and Technology, Beijing Institute of Technology , Zhongguancun South Street, Haidian, Beijing, 100081 ,"],"affiliations":[{"raw_affiliation_string":"School of Computer Science and Technology, Beijing Institute of Technology , Zhongguancun South Street, Haidian, Beijing, 100081 ,","institution_ids":["https://openalex.org/I125839683"]}]},{"author_position":"middle","author":{"id":"https://openalex.org/A5027838882","display_name":"Yixuan Ren","orcid":"https://orcid.org/0009-0006-1584-6457"},"institutions":[{"id":"https://openalex.org/I10660446","display_name":"Kunming University of Science and Technology","ror":"https://ror.org/00xyeez13","country_code":"CN","type":"education","lineage":["https://openalex.org/I10660446"]}],"countries":["CN"],"is_corresponding":false,"raw_author_name":"Yixuan Ren","raw_affiliation_strings":["Faculty of Information Engineering and Automation, Kunming University of Science and Technology , Jingming South Road, Chenggong, Kunming, Yunnan, 650500 ,"],"affiliations":[{"raw_affiliation_string":"Faculty of Information Engineering and Automation, Kunming University of Science and Technology , Jingming South Road, Chenggong, Kunming, Yunnan, 650500 ,","institution_ids":["https://openalex.org/I10660446"]}]},{"author_position":"middle","author":{"id":"https://openalex.org/A5045380530","display_name":"Min Xia","orcid":"https://orcid.org/0000-0003-4681-9129"},"institutions":[{"id":"https://openalex.org/I10660446","display_name":"Kunming University of Science and Technology","ror":"https://ror.org/00xyeez13","country_code":"CN","type":"education","lineage":["https://openalex.org/I10660446"]}],"countries":["CN"],"is_corresponding":false,"raw_author_name":"Min Xia","raw_affiliation_strings":["Faculty of Information Engineering and Automation, Kunming University of Science and Technology , Jingming South Road, Chenggong, Kunming, Yunnan, 650500 ,"],"affiliations":[{"raw_affiliation_string":"Faculty of Information Engineering and Automation, Kunming University of Science and Technology , Jingming South Road, Chenggong, Kunming, Yunnan, 650500 ,","institution_ids":["https://openalex.org/I10660446"]}]},{"author_position":"middle","author":{"id":"https://openalex.org/A5083569726","display_name":"Zhenqiu Shu","orcid":"https://orcid.org/0000-0001-5737-3383"},"institutions":[{"id":"https://openalex.org/I10660446","display_name":"Kunming University of Science and Technology","ror":"https://ror.org/00xyeez13","country_code":"CN","type":"education","lineage":["https://openalex.org/I10660446"]}],"countries":["CN"],"is_corresponding":false,"raw_author_name":"Zhenqiu Shu","raw_affiliation_strings":["Faculty of Information Engineering and Automation, Kunming University of Science and Technology , Jingming South Road, Chenggong, Kunming, Yunnan, 650500 ,"],"affiliations":[{"raw_affiliation_string":"Faculty of Information Engineering and Automation, Kunming University of Science and Technology , Jingming South Road, Chenggong, Kunming, Yunnan, 650500 ,","institution_ids":["https://openalex.org/I10660446"]}]},{"author_position":"last","author":{"id":"https://openalex.org/A5100634361","display_name":"Liehuang Zhu","orcid":"https://orcid.org/0000-0003-3277-3887"},"institutions":[{"id":"https://openalex.org/I125839683","display_name":"Beijing Institute of Technology","ror":"https://ror.org/01skt4w74","country_code":"CN","type":"education","lineage":["https://openalex.org/I125839683","https://openalex.org/I890469752"]}],"countries":["CN"],"is_corresponding":false,"raw_author_name":"Liehuang Zhu","raw_affiliation_strings":["School of Cyberspace Science and Technology, Beijing Institute of Technology , Zhongguancun South Street, Haidian, Beijing, 100081 ,"],"affiliations":[{"raw_affiliation_string":"School of Cyberspace Science and Technology, Beijing Institute of Technology , Zhongguancun South Street, Haidian, Beijing, 100081 ,","institution_ids":["https://openalex.org/I125839683"]}]}],"institutions":[],"countries_distinct_count":1,"institutions_distinct_count":5,"corresponding_author_ids":["https://openalex.org/A5101273937"],"corresponding_institution_ids":["https://openalex.org/I125839683"],"apc_list":{"value":4011,"currency":"USD","value_usd":4011},"apc_paid":{"value":4011,"currency":"USD","value_usd":4011},"fwci":2.6378,"has_fulltext":true,"cited_by_count":3,"citation_normalized_percentile":{"value":0.89346757,"is_in_top_1_percent":false,"is_in_top_10_percent":false},"cited_by_percentile_year":{"min":95,"max":99},"biblio":{"volume":"26","issue":"3","first_page":null,"last_page":null},"is_retracted":false,"is_paratext":false,"is_xpac":false,"primary_topic":{"id":"https://openalex.org/T11289","display_name":"Single-cell and spatial transcriptomics","score":1.0,"subfield":{"id":"https://openalex.org/subfields/1312","display_name":"Molecular Biology"},"field":{"id":"https://openalex.org/fields/13","display_name":"Biochemistry, Genetics and Molecular Biology"},"domain":{"id":"https://openalex.org/domains/1","display_name":"Life Sciences"}},"topics":[{"id":"https://openalex.org/T11289","display_name":"Single-cell and spatial transcriptomics","score":1.0,"subfield":{"id":"https://openalex.org/subfields/1312","display_name":"Molecular Biology"},"field":{"id":"https://openalex.org/fields/13","display_name":"Biochemistry, Genetics and Molecular Biology"},"domain":{"id":"https://openalex.org/domains/1","display_name":"Life Sciences"}},{"id":"https://openalex.org/T10885","display_name":"Gene expression and cancer classification","score":0.9890000224113464,"subfield":{"id":"https://openalex.org/subfields/1312","display_name":"Molecular Biology"},"field":{"id":"https://openalex.org/fields/13","display_name":"Biochemistry, Genetics and Molecular Biology"},"domain":{"id":"https://openalex.org/domains/1","display_name":"Life Sciences"}},{"id":"https://openalex.org/T10773","display_name":"Extracellular vesicles in disease","score":0.9708999991416931,"subfield":{"id":"https://openalex.org/subfields/1312","display_name":"Molecular Biology"},"field":{"id":"https://openalex.org/fields/13","display_name":"Biochemistry, Genetics and Molecular Biology"},"domain":{"id":"https://openalex.org/domains/1","display_name":"Life Sciences"}}],"keywords":[{"id":"https://openalex.org/keywords/cluster-analysis","display_name":"Cluster analysis","score":0.7849810123443604},{"id":"https://openalex.org/keywords/computer-science","display_name":"Computer science","score":0.7465766072273254},{"id":"https://openalex.org/keywords/artificial-intelligence","display_name":"Artificial intelligence","score":0.5683351159095764},{"id":"https://openalex.org/keywords/machine-learning","display_name":"Machine learning","score":0.4614516496658325},{"id":"https://openalex.org/keywords/feature","display_name":"Feature (linguistics)","score":0.4508216679096222},{"id":"https://openalex.org/keywords/adjacency-list","display_name":"Adjacency list","score":0.4501148462295532},{"id":"https://openalex.org/keywords/consistency","display_name":"Consistency (knowledge bases)","score":0.4336935877799988},{"id":"https://openalex.org/keywords/perceptron","display_name":"Perceptron","score":0.41169652342796326},{"id":"https://openalex.org/keywords/graph","display_name":"Graph","score":0.4111090302467346},{"id":"https://openalex.org/keywords/data-mining","display_name":"Data mining","score":0.4088127613067627},{"id":"https://openalex.org/keywords/pattern-recognition","display_name":"Pattern recognition (psychology)","score":0.3200429677963257},{"id":"https://openalex.org/keywords/artificial-neural-network","display_name":"Artificial neural network","score":0.2996761202812195},{"id":"https://openalex.org/keywords/theoretical-computer-science","display_name":"Theoretical computer science","score":0.16397985816001892},{"id":"https://openalex.org/keywords/algorithm","display_name":"Algorithm","score":0.10758626461029053}],"concepts":[{"id":"https://openalex.org/C73555534","wikidata":"https://www.wikidata.org/wiki/Q622825","display_name":"Cluster analysis","level":2,"score":0.7849810123443604},{"id":"https://openalex.org/C41008148","wikidata":"https://www.wikidata.org/wiki/Q21198","display_name":"Computer science","level":0,"score":0.7465766072273254},{"id":"https://openalex.org/C154945302","wikidata":"https://www.wikidata.org/wiki/Q11660","display_name":"Artificial intelligence","level":1,"score":0.5683351159095764},{"id":"https://openalex.org/C119857082","wikidata":"https://www.wikidata.org/wiki/Q2539","display_name":"Machine learning","level":1,"score":0.4614516496658325},{"id":"https://openalex.org/C2776401178","wikidata":"https://www.wikidata.org/wiki/Q12050496","display_name":"Feature (linguistics)","level":2,"score":0.4508216679096222},{"id":"https://openalex.org/C110484373","wikidata":"https://www.wikidata.org/wiki/Q264398","display_name":"Adjacency list","level":2,"score":0.4501148462295532},{"id":"https://openalex.org/C2776436953","wikidata":"https://www.wikidata.org/wiki/Q5163215","display_name":"Consistency (knowledge bases)","level":2,"score":0.4336935877799988},{"id":"https://openalex.org/C60908668","wikidata":"https://www.wikidata.org/wiki/Q690207","display_name":"Perceptron","level":3,"score":0.41169652342796326},{"id":"https://openalex.org/C132525143","wikidata":"https://www.wikidata.org/wiki/Q141488","display_name":"Graph","level":2,"score":0.4111090302467346},{"id":"https://openalex.org/C124101348","wikidata":"https://www.wikidata.org/wiki/Q172491","display_name":"Data mining","level":1,"score":0.4088127613067627},{"id":"https://openalex.org/C153180895","wikidata":"https://www.wikidata.org/wiki/Q7148389","display_name":"Pattern recognition (psychology)","level":2,"score":0.3200429677963257},{"id":"https://openalex.org/C50644808","wikidata":"https://www.wikidata.org/wiki/Q192776","display_name":"Artificial neural network","level":2,"score":0.2996761202812195},{"id":"https://openalex.org/C80444323","wikidata":"https://www.wikidata.org/wiki/Q2878974","display_name":"Theoretical computer science","level":1,"score":0.16397985816001892},{"id":"https://openalex.org/C11413529","wikidata":"https://www.wikidata.org/wiki/Q8366","display_name":"Algorithm","level":1,"score":0.10758626461029053},{"id":"https://openalex.org/C138885662","wikidata":"https://www.wikidata.org/wiki/Q5891","display_name":"Philosophy","level":0,"score":0.0},{"id":"https://openalex.org/C41895202","wikidata":"https://www.wikidata.org/wiki/Q8162","display_name":"Linguistics","level":1,"score":0.0}],"mesh":[{"descriptor_ui":"D000069550","descriptor_name":"Machine Learning","qualifier_ui":null,"qualifier_name":null,"is_major_topic":true},{"descriptor_ui":"D000069550","descriptor_name":"Machine Learning","qualifier_ui":null,"qualifier_name":null,"is_major_topic":true},{"descriptor_ui":"D000069550","descriptor_name":"Machine Learning","qualifier_ui":null,"qualifier_name":null,"is_major_topic":true},{"descriptor_ui":"D000069550","descriptor_name":"Machine Learning","qualifier_ui":null,"qualifier_name":null,"is_major_topic":true},{"descriptor_ui":"D000069550","descriptor_name":"Machine Learning","qualifier_ui":null,"qualifier_name":null,"is_major_topic":true},{"descriptor_ui":"D000081246","descriptor_name":"RNA-Seq","qualifier_ui":"Q000379","qualifier_name":"methods","is_major_topic":true},{"descriptor_ui":"D000081246","descriptor_name":"RNA-Seq","qualifier_ui":"Q000379","qualifier_name":"methods","is_major_topic":true},{"descriptor_ui":"D000081246","descriptor_name":"RNA-Seq","qualifier_ui":"Q000379","qualifier_name":"methods","is_major_topic":true},{"descriptor_ui":"D000081246","descriptor_name":"RNA-Seq","qualifier_ui":"Q000379","qualifier_name":"methods","is_major_topic":true},{"descriptor_ui":"D000081246","descriptor_name":"RNA-Seq","qualifier_ui":"Q000379","qualifier_name":"methods","is_major_topic":true},{"descriptor_ui":"D000092386","descriptor_name":"Single-Cell Gene Expression Analysis","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D000092386","descriptor_name":"Single-Cell Gene Expression Analysis","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D000092386","descriptor_name":"Single-Cell Gene Expression Analysis","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D000092386","descriptor_name":"Single-Cell Gene Expression Analysis","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D000092386","descriptor_name":"Single-Cell Gene Expression Analysis","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D000465","descriptor_name":"Algorithms","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D000465","descriptor_name":"Algorithms","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D000465","descriptor_name":"Algorithms","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D000465","descriptor_name":"Algorithms","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D000465","descriptor_name":"Algorithms","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D000818","descriptor_name":"Animals","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D000818","descriptor_name":"Animals","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D000818","descriptor_name":"Animals","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D000818","descriptor_name":"Animals","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D000818","descriptor_name":"Animals","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D006801","descriptor_name":"Humans","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D006801","descriptor_name":"Humans","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D006801","descriptor_name":"Humans","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D006801","descriptor_name":"Humans","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D006801","descriptor_name":"Humans","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D016000","descriptor_name":"Cluster Analysis","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D016000","descriptor_name":"Cluster Analysis","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D016000","descriptor_name":"Cluster Analysis","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D016000","descriptor_name":"Cluster Analysis","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D016000","descriptor_name":"Cluster Analysis","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D016571","descriptor_name":"Neural Networks, Computer","qualifier_ui":null,"qualifier_name":null,"is_major_topic":true},{"descriptor_ui":"D016571","descriptor_name":"Neural Networks, Computer","qualifier_ui":null,"qualifier_name":null,"is_major_topic":true},{"descriptor_ui":"D016571","descriptor_name":"Neural Networks, Computer","qualifier_ui":null,"qualifier_name":null,"is_major_topic":true},{"descriptor_ui":"D016571","descriptor_name":"Neural Networks, Computer","qualifier_ui":null,"qualifier_name":null,"is_major_topic":true},{"descriptor_ui":"D016571","descriptor_name":"Neural Networks, Computer","qualifier_ui":null,"qualifier_name":null,"is_major_topic":true},{"descriptor_ui":"D017423","descriptor_name":"Sequence Analysis, RNA","qualifier_ui":"Q000379","qualifier_name":"methods","is_major_topic":true},{"descriptor_ui":"D017423","descriptor_name":"Sequence Analysis, RNA","qualifier_ui":"Q000379","qualifier_name":"methods","is_major_topic":true},{"descriptor_ui":"D017423","descriptor_name":"Sequence Analysis, RNA","qualifier_ui":"Q000379","qualifier_name":"methods","is_major_topic":true},{"descriptor_ui":"D017423","descriptor_name":"Sequence Analysis, RNA","qualifier_ui":"Q000379","qualifier_name":"methods","is_major_topic":true},{"descriptor_ui":"D017423","descriptor_name":"Sequence Analysis, RNA","qualifier_ui":"Q000379","qualifier_name":"methods","is_major_topic":true},{"descriptor_ui":"D019295","descriptor_name":"Computational Biology","qualifier_ui":"Q000379","qualifier_name":"methods","is_major_topic":false},{"descriptor_ui":"D019295","descriptor_name":"Computational Biology","qualifier_ui":"Q000379","qualifier_name":"methods","is_major_topic":false},{"descriptor_ui":"D019295","descriptor_name":"Computational Biology","qualifier_ui":"Q000379","qualifier_name":"methods","is_major_topic":false},{"descriptor_ui":"D019295","descriptor_name":"Computational Biology","qualifier_ui":"Q000379","qualifier_name":"methods","is_major_topic":false},{"descriptor_ui":"D019295","descriptor_name":"Computational Biology","qualifier_ui":"Q000379","qualifier_name":"methods","is_major_topic":false},{"descriptor_ui":"D059010","descriptor_name":"Single-Cell Analysis","qualifier_ui":"Q000379","qualifier_name":"methods","is_major_topic":true},{"descriptor_ui":"D059010","descriptor_name":"Single-Cell Analysis","qualifier_ui":"Q000379","qualifier_name":"methods","is_major_topic":true},{"descriptor_ui":"D059010","descriptor_name":"Single-Cell Analysis","qualifier_ui":"Q000379","qualifier_name":"methods","is_major_topic":true},{"descriptor_ui":"D059010","descriptor_name":"Single-Cell Analysis","qualifier_ui":"Q000379","qualifier_name":"methods","is_major_topic":true},{"descriptor_ui":"D059010","descriptor_name":"Single-Cell Analysis","qualifier_ui":"Q000379","qualifier_name":"methods","is_major_topic":true}],"locations_count":3,"locations":[{"id":"doi:10.1093/bib/bbaf198","is_oa":true,"landing_page_url":"https://doi.org/10.1093/bib/bbaf198","pdf_url":"https://academic.oup.com/bib/article-pdf/26/3/bbaf198/63180757/bbaf198.pdf","source":{"id":"https://openalex.org/S91767247","display_name":"Briefings in Bioinformatics","issn_l":"1467-5463","issn":["1467-5463","1477-4054"],"is_oa":true,"is_in_doaj":true,"is_core":true,"host_organization":"https://openalex.org/P4310311648","host_organization_name":"Oxford University Press","host_organization_lineage":["https://openalex.org/P4310311648","https://openalex.org/P4310311647"],"host_organization_lineage_names":["Oxford University Press","University of Oxford"],"type":"journal"},"license":"cc-by-nc","license_id":"https://openalex.org/licenses/cc-by-nc","version":"publishedVersion","is_accepted":true,"is_published":true,"raw_source_name":"Briefings in Bioinformatics","raw_type":"journal-article"},{"id":"pmid:40366859","is_oa":false,"landing_page_url":"https://pubmed.ncbi.nlm.nih.gov/40366859","pdf_url":null,"source":{"id":"https://openalex.org/S4306525036","display_name":"PubMed","issn_l":null,"issn":null,"is_oa":false,"is_in_doaj":false,"is_core":false,"host_organization":"https://openalex.org/I1299303238","host_organization_name":"National Institutes of Health","host_organization_lineage":["https://openalex.org/I1299303238"],"host_organization_lineage_names":[],"type":"repository"},"license":null,"license_id":null,"version":"publishedVersion","is_accepted":true,"is_published":true,"raw_source_name":"Briefings in bioinformatics","raw_type":null},{"id":"pmh:oai:pubmedcentral.nih.gov:12077398","is_oa":true,"landing_page_url":"https://www.ncbi.nlm.nih.gov/pmc/articles/12077398","pdf_url":null,"source":{"id":"https://openalex.org/S2764455111","display_name":"PubMed Central","issn_l":null,"issn":null,"is_oa":false,"is_in_doaj":false,"is_core":false,"host_organization":"https://openalex.org/I1299303238","host_organization_name":"National Institutes of Health","host_organization_lineage":["https://openalex.org/I1299303238"],"host_organization_lineage_names":[],"type":"repository"},"license":"other-oa","license_id":"https://openalex.org/licenses/other-oa","version":"submittedVersion","is_accepted":false,"is_published":false,"raw_source_name":"Brief Bioinform","raw_type":"Text"}],"best_oa_location":{"id":"doi:10.1093/bib/bbaf198","is_oa":true,"landing_page_url":"https://doi.org/10.1093/bib/bbaf198","pdf_url":"https://academic.oup.com/bib/article-pdf/26/3/bbaf198/63180757/bbaf198.pdf","source":{"id":"https://openalex.org/S91767247","display_name":"Briefings in Bioinformatics","issn_l":"1467-5463","issn":["1467-5463","1477-4054"],"is_oa":true,"is_in_doaj":true,"is_core":true,"host_organization":"https://openalex.org/P4310311648","host_organization_name":"Oxford University Press","host_organization_lineage":["https://openalex.org/P4310311648","https://openalex.org/P4310311647"],"host_organization_lineage_names":["Oxford University Press","University of Oxford"],"type":"journal"},"license":"cc-by-nc","license_id":"https://openalex.org/licenses/cc-by-nc","version":"publishedVersion","is_accepted":true,"is_published":true,"raw_source_name":"Briefings in Bioinformatics","raw_type":"journal-article"},"sustainable_development_goals":[{"score":0.6899999976158142,"id":"https://metadata.un.org/sdg/10","display_name":"Reduced inequalities"}],"awards":[],"funders":[],"has_content":{"pdf":true,"grobid_xml":false},"content_urls":{"pdf":"https://content.openalex.org/works/W4410419158.pdf"},"referenced_works_count":61,"referenced_works":["https://openalex.org/W1902027874","https://openalex.org/W1977556410","https://openalex.org/W2030644393","https://openalex.org/W2088252378","https://openalex.org/W2109890799","https://openalex.org/W2128040385","https://openalex.org/W2131681506","https://openalex.org/W2132914434","https://openalex.org/W2169658215","https://openalex.org/W2187089797","https://openalex.org/W2279323413","https://openalex.org/W2562003322","https://openalex.org/W2601723752","https://openalex.org/W2606690922","https://openalex.org/W2800392236","https://openalex.org/W2887326710","https://openalex.org/W2894687190","https://openalex.org/W2897249806","https://openalex.org/W2911688091","https://openalex.org/W2951381561","https://openalex.org/W2951890476","https://openalex.org/W2953251392","https://openalex.org/W2995268793","https://openalex.org/W3016453687","https://openalex.org/W3021272327","https://openalex.org/W3092358283","https://openalex.org/W3095035414","https://openalex.org/W3099768174","https://openalex.org/W3105941260","https://openalex.org/W3106188259","https://openalex.org/W3138479716","https://openalex.org/W3201933794","https://openalex.org/W3212776961","https://openalex.org/W4205622962","https://openalex.org/W4206174637","https://openalex.org/W4213367101","https://openalex.org/W4220837089","https://openalex.org/W4226356561","https://openalex.org/W4310601440","https://openalex.org/W4312426768","https://openalex.org/W4315621823","https://openalex.org/W4319866019","https://openalex.org/W4319999819","https://openalex.org/W4362521490","https://openalex.org/W4378348563","https://openalex.org/W4386295460","https://openalex.org/W4387125037","https://openalex.org/W4387300154","https://openalex.org/W4389217152","https://openalex.org/W4389731574","https://openalex.org/W4391815397","https://openalex.org/W4395029107","https://openalex.org/W4403198130","https://openalex.org/W4404019762","https://openalex.org/W6631235637","https://openalex.org/W6644682428","https://openalex.org/W6649534527","https://openalex.org/W6736919813","https://openalex.org/W6760001035","https://openalex.org/W6852274001","https://openalex.org/W6858695448"],"related_works":["https://openalex.org/W2611163850","https://openalex.org/W1845849701","https://openalex.org/W3015250136","https://openalex.org/W1980812295","https://openalex.org/W2044218713","https://openalex.org/W2625268413","https://openalex.org/W2962989220","https://openalex.org/W2379234996","https://openalex.org/W4247900000","https://openalex.org/W2900798793"],"abstract_inverted_index":{"Clustering":[0],"is":[1],"pivotal":[2],"in":[3,7,19,52],"deciphering":[4],"cellular":[5],"heterogeneity":[6],"single-cell":[8],"RNA":[9],"sequencing":[10],"(scRNA-seq)":[11],"data.":[12,28],"However,":[13],"it":[14],"suffers":[15],"from":[16,152],"several":[17],"challenges":[18],"handling":[20],"the":[21,39,46,58,103,123,128,132,140,159],"high":[22,53],"dimensionality":[23],"and":[24,95,117,125,137,155],"complexity":[25],"of":[26,48,127],"scRNA-seq":[27,81,150,167],"Especially":[29],"when":[30],"employing":[31],"graph":[32],"neural":[33],"networks":[34],"(GNNs)":[35],"for":[36,80],"cell":[37,105,141],"clustering,":[38],"dependencies":[40],"between":[41],"cells":[42],"expand":[43],"exponentially":[44],"with":[45],"number":[47],"layers.":[49],"This":[50],"results":[51,146],"computational":[54],"complexity,":[55],"negatively":[56],"impacting":[57],"model's":[59],"training":[60],"efficiency.":[61],"To":[62],"address":[63],"these":[64],"challenges,":[65],"we":[66],"propose":[67],"a":[68,114,118],"novel":[69],"approach,":[70],"called":[71],"decoupled":[72,99],"GNNs,":[73],"based":[74],"on":[75,147],"multi-view":[76],"contrastive":[77,119],"learning":[78,120],"(scDeGNN),":[79],"data":[82,168],"clustering.":[83],"Firstly,":[84],"this":[85],"method":[86,162],"constructs":[87],"two":[88],"adjacency":[89],"matrices":[90],"to":[91,101,139],"generate":[92],"distinct":[93],"views,":[94],"trains":[96],"them":[97],"using":[98],"GNNs":[100],"derive":[102],"initial":[104],"feature":[106],"representations.":[107],"These":[108],"representations":[109,134],"are":[110,135],"then":[111],"refined":[112],"through":[113],"multilayer":[115],"perceptron":[116],"layer,":[121],"ensuring":[122],"consistency":[124],"discriminability":[126],"learned":[129,133],"features.":[130],"Finally,":[131],"fused":[136],"applied":[138],"clustering":[142,169],"task.":[143],"Extensive":[144],"experimental":[145],"nine":[148],"real":[149],"datasets":[151],"various":[153],"organisms":[154],"tissues":[156],"show":[157],"that":[158],"proposed":[160],"scDeGNN":[161],"significantly":[163],"outperforms":[164],"other":[165],"state-of-the-art":[166],"algorithms":[170],"across":[171],"multiple":[172],"evaluation":[173],"metrics.":[174]},"counts_by_year":[{"year":2026,"cited_by_count":1},{"year":2025,"cited_by_count":2}],"updated_date":"2026-03-11T06:11:40.159057","created_date":"2025-10-10T00:00:00"}
