{"id":"https://openalex.org/W4409349242","doi":"https://doi.org/10.1093/bib/bbaf158","title":"A comprehensive review and evaluation of species richness estimation","display_name":"A comprehensive review and evaluation of species richness estimation","publication_year":2025,"publication_date":"2025-03-01","ids":{"openalex":"https://openalex.org/W4409349242","doi":"https://doi.org/10.1093/bib/bbaf158","pmid":"https://pubmed.ncbi.nlm.nih.gov/40211980"},"language":"en","primary_location":{"id":"doi:10.1093/bib/bbaf158","is_oa":true,"landing_page_url":"https://doi.org/10.1093/bib/bbaf158","pdf_url":"https://academic.oup.com/bib/article-pdf/26/2/bbaf158/62909347/bbaf158.pdf","source":{"id":"https://openalex.org/S91767247","display_name":"Briefings in Bioinformatics","issn_l":"1467-5463","issn":["1467-5463","1477-4054"],"is_oa":true,"is_in_doaj":true,"is_core":true,"host_organization":"https://openalex.org/P4310311648","host_organization_name":"Oxford University Press","host_organization_lineage":["https://openalex.org/P4310311648","https://openalex.org/P4310311647"],"host_organization_lineage_names":["Oxford University Press","University of Oxford"],"type":"journal"},"license":"cc-by","license_id":"https://openalex.org/licenses/cc-by","version":"publishedVersion","is_accepted":true,"is_published":true,"raw_source_name":"Briefings in Bioinformatics","raw_type":"journal-article"},"type":"review","indexed_in":["crossref","doaj","pubmed"],"open_access":{"is_oa":true,"oa_status":"gold","oa_url":"https://academic.oup.com/bib/article-pdf/26/2/bbaf158/62909347/bbaf158.pdf","any_repository_has_fulltext":true},"authorships":[{"author_position":"first","author":{"id":"https://openalex.org/A5042896044","display_name":"Johanna Elena Schmitz","orcid":"https://orcid.org/0009-0002-6377-2561"},"institutions":[{"id":"https://openalex.org/I4210109712","display_name":"Max Planck Institute for Informatics","ror":"https://ror.org/01w19ak89","country_code":"DE","type":"facility","lineage":["https://openalex.org/I149899117","https://openalex.org/I4210109712"]}],"countries":["DE"],"is_corresponding":true,"raw_author_name":"Johanna Elena Schmitz","raw_affiliation_strings":["Algorithmic Bioinformatics , Center for Bioinformatics Saar, Saarland Informatics Campus, 66123 Saarbr\u00fccken,","Fakult\u00e4t MI , Saarland University, Saarland Informatics Campus, 66123 Saarbr\u00fccken,","Saarbr\u00fccken Graduate School of Computer Science , Saarland Informatics Campus, 66123 Saarbr\u00fccken,"],"affiliations":[{"raw_affiliation_string":"Algorithmic Bioinformatics , Center for Bioinformatics Saar, Saarland Informatics Campus, 66123 Saarbr\u00fccken,","institution_ids":["https://openalex.org/I4210109712"]},{"raw_affiliation_string":"Fakult\u00e4t MI , Saarland University, Saarland Informatics Campus, 66123 Saarbr\u00fccken,","institution_ids":[]},{"raw_affiliation_string":"Saarbr\u00fccken Graduate School of Computer Science , Saarland Informatics Campus, 66123 Saarbr\u00fccken,","institution_ids":[]}]},{"author_position":"last","author":{"id":"https://openalex.org/A5059606670","display_name":"Sven Rahmann","orcid":"https://orcid.org/0000-0002-8536-6065"},"institutions":[{"id":"https://openalex.org/I4210109712","display_name":"Max Planck Institute for Informatics","ror":"https://ror.org/01w19ak89","country_code":"DE","type":"facility","lineage":["https://openalex.org/I149899117","https://openalex.org/I4210109712"]}],"countries":["DE"],"is_corresponding":false,"raw_author_name":"Sven Rahmann","raw_affiliation_strings":["Algorithmic Bioinformatics , Center for Bioinformatics Saar, Saarland Informatics Campus, 66123 Saarbr\u00fccken,","Fakult\u00e4t MI , Saarland University, Saarland Informatics Campus, 66123 Saarbr\u00fccken,"],"affiliations":[{"raw_affiliation_string":"Algorithmic Bioinformatics , Center for Bioinformatics Saar, Saarland Informatics Campus, 66123 Saarbr\u00fccken,","institution_ids":["https://openalex.org/I4210109712"]},{"raw_affiliation_string":"Fakult\u00e4t MI , Saarland University, Saarland Informatics Campus, 66123 Saarbr\u00fccken,","institution_ids":[]}]}],"institutions":[],"countries_distinct_count":1,"institutions_distinct_count":2,"corresponding_author_ids":["https://openalex.org/A5042896044"],"corresponding_institution_ids":["https://openalex.org/I4210109712"],"apc_list":{"value":4011,"currency":"USD","value_usd":4011},"apc_paid":{"value":4011,"currency":"USD","value_usd":4011},"fwci":19.8267,"has_fulltext":true,"cited_by_count":8,"citation_normalized_percentile":{"value":0.99418827,"is_in_top_1_percent":true,"is_in_top_10_percent":true},"cited_by_percentile_year":{"min":98,"max":99},"biblio":{"volume":"26","issue":"2","first_page":null,"last_page":null},"is_retracted":false,"is_paratext":false,"is_xpac":false,"primary_topic":{"id":"https://openalex.org/T13546","display_name":"Census and Population Estimation","score":0.9897000193595886,"subfield":{"id":"https://openalex.org/subfields/2613","display_name":"Statistics and Probability"},"field":{"id":"https://openalex.org/fields/26","display_name":"Mathematics"},"domain":{"id":"https://openalex.org/domains/3","display_name":"Physical Sciences"}},"topics":[{"id":"https://openalex.org/T13546","display_name":"Census and Population Estimation","score":0.9897000193595886,"subfield":{"id":"https://openalex.org/subfields/2613","display_name":"Statistics and Probability"},"field":{"id":"https://openalex.org/fields/26","display_name":"Mathematics"},"domain":{"id":"https://openalex.org/domains/3","display_name":"Physical Sciences"}},{"id":"https://openalex.org/T10066","display_name":"Gut microbiota and health","score":0.9164000153541565,"subfield":{"id":"https://openalex.org/subfields/1312","display_name":"Molecular Biology"},"field":{"id":"https://openalex.org/fields/13","display_name":"Biochemistry, Genetics and Molecular Biology"},"domain":{"id":"https://openalex.org/domains/1","display_name":"Life Sciences"}},{"id":"https://openalex.org/T11913","display_name":"Animal Ecology and Behavior Studies","score":0.9114999771118164,"subfield":{"id":"https://openalex.org/subfields/2303","display_name":"Ecology"},"field":{"id":"https://openalex.org/fields/23","display_name":"Environmental Science"},"domain":{"id":"https://openalex.org/domains/3","display_name":"Physical Sciences"}}],"keywords":[{"id":"https://openalex.org/keywords/species-richness","display_name":"Species richness","score":0.9492453336715698},{"id":"https://openalex.org/keywords/estimator","display_name":"Estimator","score":0.6523642539978027},{"id":"https://openalex.org/keywords/multiset","display_name":"Multiset","score":0.5674455761909485},{"id":"https://openalex.org/keywords/sampling","display_name":"Sampling (signal processing)","score":0.5545444488525391},{"id":"https://openalex.org/keywords/statistics","display_name":"Statistics","score":0.5368360280990601},{"id":"https://openalex.org/keywords/population","display_name":"Population","score":0.5097476840019226},{"id":"https://openalex.org/keywords/sample-size-determination","display_name":"Sample size determination","score":0.47717276215553284},{"id":"https://openalex.org/keywords/sample","display_name":"Sample (material)","score":0.4663357734680176},{"id":"https://openalex.org/keywords/estimation","display_name":"Estimation","score":0.4660884737968445},{"id":"https://openalex.org/keywords/ecology","display_name":"Ecology","score":0.4575977921485901},{"id":"https://openalex.org/keywords/computer-science","display_name":"Computer science","score":0.4381648302078247},{"id":"https://openalex.org/keywords/mathematics","display_name":"Mathematics","score":0.3260534405708313},{"id":"https://openalex.org/keywords/biology","display_name":"Biology","score":0.2460254728794098}],"concepts":[{"id":"https://openalex.org/C53565203","wikidata":"https://www.wikidata.org/wiki/Q17146659","display_name":"Species richness","level":2,"score":0.9492453336715698},{"id":"https://openalex.org/C185429906","wikidata":"https://www.wikidata.org/wiki/Q1130160","display_name":"Estimator","level":2,"score":0.6523642539978027},{"id":"https://openalex.org/C2779623528","wikidata":"https://www.wikidata.org/wiki/Q864377","display_name":"Multiset","level":2,"score":0.5674455761909485},{"id":"https://openalex.org/C140779682","wikidata":"https://www.wikidata.org/wiki/Q210868","display_name":"Sampling (signal processing)","level":3,"score":0.5545444488525391},{"id":"https://openalex.org/C105795698","wikidata":"https://www.wikidata.org/wiki/Q12483","display_name":"Statistics","level":1,"score":0.5368360280990601},{"id":"https://openalex.org/C2908647359","wikidata":"https://www.wikidata.org/wiki/Q2625603","display_name":"Population","level":2,"score":0.5097476840019226},{"id":"https://openalex.org/C129848803","wikidata":"https://www.wikidata.org/wiki/Q2564360","display_name":"Sample size determination","level":2,"score":0.47717276215553284},{"id":"https://openalex.org/C198531522","wikidata":"https://www.wikidata.org/wiki/Q485146","display_name":"Sample (material)","level":2,"score":0.4663357734680176},{"id":"https://openalex.org/C96250715","wikidata":"https://www.wikidata.org/wiki/Q965330","display_name":"Estimation","level":2,"score":0.4660884737968445},{"id":"https://openalex.org/C18903297","wikidata":"https://www.wikidata.org/wiki/Q7150","display_name":"Ecology","level":1,"score":0.4575977921485901},{"id":"https://openalex.org/C41008148","wikidata":"https://www.wikidata.org/wiki/Q21198","display_name":"Computer science","level":0,"score":0.4381648302078247},{"id":"https://openalex.org/C33923547","wikidata":"https://www.wikidata.org/wiki/Q395","display_name":"Mathematics","level":0,"score":0.3260534405708313},{"id":"https://openalex.org/C86803240","wikidata":"https://www.wikidata.org/wiki/Q420","display_name":"Biology","level":0,"score":0.2460254728794098},{"id":"https://openalex.org/C162324750","wikidata":"https://www.wikidata.org/wiki/Q8134","display_name":"Economics","level":0,"score":0.0},{"id":"https://openalex.org/C106131492","wikidata":"https://www.wikidata.org/wiki/Q3072260","display_name":"Filter (signal processing)","level":2,"score":0.0},{"id":"https://openalex.org/C187736073","wikidata":"https://www.wikidata.org/wiki/Q2920921","display_name":"Management","level":1,"score":0.0},{"id":"https://openalex.org/C31972630","wikidata":"https://www.wikidata.org/wiki/Q844240","display_name":"Computer vision","level":1,"score":0.0},{"id":"https://openalex.org/C43617362","wikidata":"https://www.wikidata.org/wiki/Q170050","display_name":"Chromatography","level":1,"score":0.0},{"id":"https://openalex.org/C144024400","wikidata":"https://www.wikidata.org/wiki/Q21201","display_name":"Sociology","level":0,"score":0.0},{"id":"https://openalex.org/C149923435","wikidata":"https://www.wikidata.org/wiki/Q37732","display_name":"Demography","level":1,"score":0.0},{"id":"https://openalex.org/C114614502","wikidata":"https://www.wikidata.org/wiki/Q76592","display_name":"Combinatorics","level":1,"score":0.0},{"id":"https://openalex.org/C185592680","wikidata":"https://www.wikidata.org/wiki/Q2329","display_name":"Chemistry","level":0,"score":0.0}],"mesh":[{"descriptor_ui":"D000465","descriptor_name":"Algorithms","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D000465","descriptor_name":"Algorithms","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D000465","descriptor_name":"Algorithms","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D000818","descriptor_name":"Animals","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D000818","descriptor_name":"Animals","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D000818","descriptor_name":"Animals","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D003198","descriptor_name":"Computer Simulation","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D003198","descriptor_name":"Computer Simulation","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D003198","descriptor_name":"Computer Simulation","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D019295","descriptor_name":"Computational Biology","qualifier_ui":"Q000379","qualifier_name":"methods","is_major_topic":false},{"descriptor_ui":"D019295","descriptor_name":"Computational Biology","qualifier_ui":"Q000379","qualifier_name":"methods","is_major_topic":false},{"descriptor_ui":"D019295","descriptor_name":"Computational Biology","qualifier_ui":"Q000379","qualifier_name":"methods","is_major_topic":false},{"descriptor_ui":"D044822","descriptor_name":"Biodiversity","qualifier_ui":null,"qualifier_name":null,"is_major_topic":true},{"descriptor_ui":"D044822","descriptor_name":"Biodiversity","qualifier_ui":null,"qualifier_name":null,"is_major_topic":true},{"descriptor_ui":"D044822","descriptor_name":"Biodiversity","qualifier_ui":null,"qualifier_name":null,"is_major_topic":true}],"locations_count":3,"locations":[{"id":"doi:10.1093/bib/bbaf158","is_oa":true,"landing_page_url":"https://doi.org/10.1093/bib/bbaf158","pdf_url":"https://academic.oup.com/bib/article-pdf/26/2/bbaf158/62909347/bbaf158.pdf","source":{"id":"https://openalex.org/S91767247","display_name":"Briefings in Bioinformatics","issn_l":"1467-5463","issn":["1467-5463","1477-4054"],"is_oa":true,"is_in_doaj":true,"is_core":true,"host_organization":"https://openalex.org/P4310311648","host_organization_name":"Oxford University Press","host_organization_lineage":["https://openalex.org/P4310311648","https://openalex.org/P4310311647"],"host_organization_lineage_names":["Oxford University Press","University of Oxford"],"type":"journal"},"license":"cc-by","license_id":"https://openalex.org/licenses/cc-by","version":"publishedVersion","is_accepted":true,"is_published":true,"raw_source_name":"Briefings in Bioinformatics","raw_type":"journal-article"},{"id":"pmid:40211980","is_oa":false,"landing_page_url":"https://pubmed.ncbi.nlm.nih.gov/40211980","pdf_url":null,"source":{"id":"https://openalex.org/S4306525036","display_name":"PubMed","issn_l":null,"issn":null,"is_oa":false,"is_in_doaj":false,"is_core":false,"host_organization":"https://openalex.org/I1299303238","host_organization_name":"National Institutes of Health","host_organization_lineage":["https://openalex.org/I1299303238"],"host_organization_lineage_names":[],"type":"repository"},"license":null,"license_id":null,"version":"publishedVersion","is_accepted":true,"is_published":true,"raw_source_name":"Briefings in bioinformatics","raw_type":null},{"id":"pmh:oai:pubmedcentral.nih.gov:11986355","is_oa":true,"landing_page_url":"https://www.ncbi.nlm.nih.gov/pmc/articles/11986355","pdf_url":null,"source":{"id":"https://openalex.org/S2764455111","display_name":"PubMed Central","issn_l":null,"issn":null,"is_oa":false,"is_in_doaj":false,"is_core":false,"host_organization":"https://openalex.org/I1299303238","host_organization_name":"National Institutes of Health","host_organization_lineage":["https://openalex.org/I1299303238"],"host_organization_lineage_names":[],"type":"repository"},"license":"cc-by","license_id":"https://openalex.org/licenses/cc-by","version":"submittedVersion","is_accepted":false,"is_published":false,"raw_source_name":"Brief Bioinform","raw_type":"Text"}],"best_oa_location":{"id":"doi:10.1093/bib/bbaf158","is_oa":true,"landing_page_url":"https://doi.org/10.1093/bib/bbaf158","pdf_url":"https://academic.oup.com/bib/article-pdf/26/2/bbaf158/62909347/bbaf158.pdf","source":{"id":"https://openalex.org/S91767247","display_name":"Briefings in Bioinformatics","issn_l":"1467-5463","issn":["1467-5463","1477-4054"],"is_oa":true,"is_in_doaj":true,"is_core":true,"host_organization":"https://openalex.org/P4310311648","host_organization_name":"Oxford University Press","host_organization_lineage":["https://openalex.org/P4310311648","https://openalex.org/P4310311647"],"host_organization_lineage_names":["Oxford University Press","University of Oxford"],"type":"journal"},"license":"cc-by","license_id":"https://openalex.org/licenses/cc-by","version":"publishedVersion","is_accepted":true,"is_published":true,"raw_source_name":"Briefings in Bioinformatics","raw_type":"journal-article"},"sustainable_development_goals":[{"id":"https://metadata.un.org/sdg/15","score":0.75,"display_name":"Life in Land"}],"awards":[],"funders":[],"has_content":{"pdf":true,"grobid_xml":true},"content_urls":{"pdf":"https://content.openalex.org/works/W4409349242.pdf","grobid_xml":"https://content.openalex.org/works/W4409349242.grobid-xml"},"referenced_works_count":51,"referenced_works":["https://openalex.org/W1558982506","https://openalex.org/W1903024071","https://openalex.org/W1947238173","https://openalex.org/W1971924941","https://openalex.org/W2006772779","https://openalex.org/W2024180465","https://openalex.org/W2031132810","https://openalex.org/W2032421424","https://openalex.org/W2041457600","https://openalex.org/W2045740840","https://openalex.org/W2053218206","https://openalex.org/W2073657083","https://openalex.org/W2082092506","https://openalex.org/W2089373911","https://openalex.org/W2100171046","https://openalex.org/W2104767862","https://openalex.org/W2109584831","https://openalex.org/W2114413252","https://openalex.org/W2116601594","https://openalex.org/W2120108422","https://openalex.org/W2146368895","https://openalex.org/W2147097285","https://openalex.org/W2157234590","https://openalex.org/W2171783890","https://openalex.org/W2173617309","https://openalex.org/W2185265351","https://openalex.org/W2333551009","https://openalex.org/W2460850757","https://openalex.org/W2554091414","https://openalex.org/W2762763087","https://openalex.org/W2894608584","https://openalex.org/W2951070274","https://openalex.org/W2957585395","https://openalex.org/W2995888600","https://openalex.org/W3020766009","https://openalex.org/W3113259223","https://openalex.org/W3122109253","https://openalex.org/W3128701120","https://openalex.org/W3214742857","https://openalex.org/W4233471163","https://openalex.org/W4237125779","https://openalex.org/W4253764066","https://openalex.org/W4295665005","https://openalex.org/W4308179455","https://openalex.org/W4313646703","https://openalex.org/W4319997146","https://openalex.org/W6628349992","https://openalex.org/W6633139782","https://openalex.org/W6633575141","https://openalex.org/W6678035020","https://openalex.org/W6704143266"],"related_works":["https://openalex.org/W4300455649","https://openalex.org/W2296588302","https://openalex.org/W4328119206","https://openalex.org/W2033245919","https://openalex.org/W4252409532","https://openalex.org/W2006067547","https://openalex.org/W9228044","https://openalex.org/W3143753676","https://openalex.org/W2954483618","https://openalex.org/W2770810599"],"abstract_inverted_index":{"Source":[0],"code":[1],"for":[2],"data":[3],"simulation":[4],"and":[5],"richness":[6],"estimation":[7],"is":[8],"available":[9],"at":[10],"https://gitlab.com/rahmannlab/speciesrichness.":[11]},"counts_by_year":[{"year":2026,"cited_by_count":3},{"year":2025,"cited_by_count":5}],"updated_date":"2026-04-11T08:14:18.477133","created_date":"2025-10-10T00:00:00"}
