{"id":"https://openalex.org/W4408845911","doi":"https://doi.org/10.1093/bib/bbaf131","title":"MethPriorGCN: a deep learning tool for inferring DNA methylation prior knowledge and guiding personalized medicine","display_name":"MethPriorGCN: a deep learning tool for inferring DNA methylation prior knowledge and guiding personalized medicine","publication_year":2025,"publication_date":"2025-03-01","ids":{"openalex":"https://openalex.org/W4408845911","doi":"https://doi.org/10.1093/bib/bbaf131","pmid":"https://pubmed.ncbi.nlm.nih.gov/40131311"},"language":"en","primary_location":{"id":"doi:10.1093/bib/bbaf131","is_oa":true,"landing_page_url":"https://doi.org/10.1093/bib/bbaf131","pdf_url":"https://academic.oup.com/bib/article-pdf/26/2/bbaf131/62699988/bbaf131.pdf","source":{"id":"https://openalex.org/S91767247","display_name":"Briefings in Bioinformatics","issn_l":"1467-5463","issn":["1467-5463","1477-4054"],"is_oa":true,"is_in_doaj":true,"is_core":true,"host_organization":"https://openalex.org/P4310311648","host_organization_name":"Oxford University Press","host_organization_lineage":["https://openalex.org/P4310311648","https://openalex.org/P4310311647"],"host_organization_lineage_names":["Oxford University Press","University of Oxford"],"type":"journal"},"license":"cc-by-nc","license_id":"https://openalex.org/licenses/cc-by-nc","version":"publishedVersion","is_accepted":true,"is_published":true,"raw_source_name":"Briefings in Bioinformatics","raw_type":"journal-article"},"type":"article","indexed_in":["crossref","doaj","pubmed"],"open_access":{"is_oa":true,"oa_status":"gold","oa_url":"https://academic.oup.com/bib/article-pdf/26/2/bbaf131/62699988/bbaf131.pdf","any_repository_has_fulltext":true},"authorships":[{"author_position":"first","author":{"id":"https://openalex.org/A5013615286","display_name":"Jie Ni","orcid":"https://orcid.org/0000-0001-9467-2964"},"institutions":[{"id":"https://openalex.org/I83519826","display_name":"Nanjing Medical University","ror":"https://ror.org/059gcgy73","country_code":"CN","type":"education","lineage":["https://openalex.org/I83519826"]}],"countries":["CN"],"is_corresponding":false,"raw_author_name":"Jie Ni","raw_affiliation_strings":["Department of Medical Informatics, School of Biomedical Engineering and Informatics, Nanjing Medical University , No. 101, Longmian Avenue, Jiangning District, Nanjing, Jiangsu 211166 ,","Institute for Molecular Medical Technology, State Key Laboratory of Digital Medical Engineering, School of Biological Science and Medical Engineering, Southeast University , No. 2, Southeast University Road, Jiangning District, Nanjing, Jiangsu 211102 ,","Institute of Biomedical Devices (Suzhou), Southeast University , No. 8, Jinfeng Road, Suzhou New District, Suzhou, Jiangsu 215163 ,"],"raw_orcid":null,"affiliations":[{"raw_affiliation_string":"Department of Medical Informatics, School of Biomedical Engineering and Informatics, Nanjing Medical University , No. 101, Longmian Avenue, Jiangning District, Nanjing, Jiangsu 211166 ,","institution_ids":["https://openalex.org/I83519826"]},{"raw_affiliation_string":"Institute for Molecular Medical Technology, State Key Laboratory of Digital Medical Engineering, School of Biological Science and Medical Engineering, Southeast University , No. 2, Southeast University Road, Jiangning District, Nanjing, Jiangsu 211102 ,","institution_ids":[]},{"raw_affiliation_string":"Institute of Biomedical Devices (Suzhou), Southeast University , No. 8, Jinfeng Road, Suzhou New District, Suzhou, Jiangsu 215163 ,","institution_ids":[]}]},{"author_position":"middle","author":{"id":"https://openalex.org/A5100365192","display_name":"Bin Li","orcid":"https://orcid.org/0000-0002-5717-1551"},"institutions":[],"countries":[],"is_corresponding":false,"raw_author_name":"Bin Li","raw_affiliation_strings":["Institute for Molecular Medical Technology, State Key Laboratory of Digital Medical Engineering, School of Biological Science and Medical Engineering, Southeast University , No. 2, Southeast University Road, Jiangning District, Nanjing, Jiangsu 211102 ,","Institute of Biomedical Devices (Suzhou), Southeast University , No. 8, Jinfeng Road, Suzhou New District, Suzhou, Jiangsu 215163 ,"],"raw_orcid":null,"affiliations":[{"raw_affiliation_string":"Institute for Molecular Medical Technology, State Key Laboratory of Digital Medical Engineering, School of Biological Science and Medical Engineering, Southeast University , No. 2, Southeast University Road, Jiangning District, Nanjing, Jiangsu 211102 ,","institution_ids":[]},{"raw_affiliation_string":"Institute of Biomedical Devices (Suzhou), Southeast University , No. 8, Jinfeng Road, Suzhou New District, Suzhou, Jiangsu 215163 ,","institution_ids":[]}]},{"author_position":"middle","author":{"id":"https://openalex.org/A5049755788","display_name":"Shumei Miao","orcid":"https://orcid.org/0000-0001-6101-8288"},"institutions":[{"id":"https://openalex.org/I83519826","display_name":"Nanjing Medical University","ror":"https://ror.org/059gcgy73","country_code":"CN","type":"education","lineage":["https://openalex.org/I83519826"]}],"countries":["CN"],"is_corresponding":false,"raw_author_name":"Shumei Miao","raw_affiliation_strings":["Department of Information, The First Affiliated Hospital, Nanjing Medical University , No. 300, Guangzhou Road, Gulou District, Nanjing, Jiangsu 210029 ,"],"raw_orcid":null,"affiliations":[{"raw_affiliation_string":"Department of Information, The First Affiliated Hospital, Nanjing Medical University , No. 300, Guangzhou Road, Gulou District, Nanjing, Jiangsu 210029 ,","institution_ids":["https://openalex.org/I83519826"]}]},{"author_position":"middle","author":{"id":"https://openalex.org/A5103248844","display_name":"Xinting Zhang","orcid":"https://orcid.org/0000-0001-8150-6967"},"institutions":[{"id":"https://openalex.org/I83519826","display_name":"Nanjing Medical University","ror":"https://ror.org/059gcgy73","country_code":"CN","type":"education","lineage":["https://openalex.org/I83519826"]}],"countries":["CN"],"is_corresponding":false,"raw_author_name":"Xinting Zhang","raw_affiliation_strings":["Department of Information, The First Affiliated Hospital, Nanjing Medical University , No. 300, Guangzhou Road, Gulou District, Nanjing, Jiangsu 210029 ,","Institute for Molecular Medical Technology, State Key Laboratory of Digital Medical Engineering, School of Biological Science and Medical Engineering, Southeast University , No. 2, Southeast University Road, Jiangning District, Nanjing, Jiangsu 211102 ,","Institute of Biomedical Devices (Suzhou), Southeast University , No. 8, Jinfeng Road, Suzhou New District, Suzhou, Jiangsu 215163 ,"],"raw_orcid":null,"affiliations":[{"raw_affiliation_string":"Department of Information, The First Affiliated Hospital, Nanjing Medical University , No. 300, Guangzhou Road, Gulou District, Nanjing, Jiangsu 210029 ,","institution_ids":["https://openalex.org/I83519826"]},{"raw_affiliation_string":"Institute for Molecular Medical Technology, State Key Laboratory of Digital Medical Engineering, School of Biological Science and Medical Engineering, Southeast University , No. 2, Southeast University Road, Jiangning District, Nanjing, Jiangsu 211102 ,","institution_ids":[]},{"raw_affiliation_string":"Institute of Biomedical Devices (Suzhou), Southeast University , No. 8, Jinfeng Road, Suzhou New District, Suzhou, Jiangsu 215163 ,","institution_ids":[]}]},{"author_position":"middle","author":{"id":"https://openalex.org/A5060954578","display_name":"Donghui Yan","orcid":"https://orcid.org/0000-0002-5131-1509"},"institutions":[],"countries":[],"is_corresponding":false,"raw_author_name":"Donghui Yan","raw_affiliation_strings":["Institute for Molecular Medical Technology, State Key Laboratory of Digital Medical Engineering, School of Biological Science and Medical Engineering, Southeast University , No. 2, Southeast University Road, Jiangning District, Nanjing, Jiangsu 211102 ,","Institute of Biomedical Devices (Suzhou), Southeast University , No. 8, Jinfeng Road, Suzhou New District, Suzhou, Jiangsu 215163 ,"],"raw_orcid":null,"affiliations":[{"raw_affiliation_string":"Institute for Molecular Medical Technology, State Key Laboratory of Digital Medical Engineering, School of Biological Science and Medical Engineering, Southeast University , No. 2, Southeast University Road, Jiangning District, Nanjing, Jiangsu 211102 ,","institution_ids":[]},{"raw_affiliation_string":"Institute of Biomedical Devices (Suzhou), Southeast University , No. 8, Jinfeng Road, Suzhou New District, Suzhou, Jiangsu 215163 ,","institution_ids":[]}]},{"author_position":"middle","author":{"id":null,"display_name":"Shengqi Jing","orcid":null},"institutions":[{"id":"https://openalex.org/I4210163794","display_name":"Data Management (Italy)","ror":"https://ror.org/017j5za44","country_code":"IT","type":"company","lineage":["https://openalex.org/I4210163794"]},{"id":"https://openalex.org/I83519826","display_name":"Nanjing Medical University","ror":"https://ror.org/059gcgy73","country_code":"CN","type":"education","lineage":["https://openalex.org/I83519826"]}],"countries":["CN","IT"],"is_corresponding":false,"raw_author_name":"Shengqi Jing","raw_affiliation_strings":["Center for Data Management, The First Affiliated Hospital, Nanjing Medical University , No. 300, Guangzhou Road, Gulou District, Nanjing, Jiangsu 210029 ,","Department of Information, The First Affiliated Hospital, Nanjing Medical University , No. 300, Guangzhou Road, Gulou District, Nanjing, Jiangsu 210029 ,","Department of Medical Informatics, School of Biomedical Engineering and Informatics, Nanjing Medical University , No. 101, Longmian Avenue, Jiangning District, Nanjing, Jiangsu 211166 ,"],"raw_orcid":null,"affiliations":[{"raw_affiliation_string":"Center for Data Management, The First Affiliated Hospital, Nanjing Medical University , No. 300, Guangzhou Road, Gulou District, Nanjing, Jiangsu 210029 ,","institution_ids":["https://openalex.org/I4210163794","https://openalex.org/I83519826"]},{"raw_affiliation_string":"Department of Information, The First Affiliated Hospital, Nanjing Medical University , No. 300, Guangzhou Road, Gulou District, Nanjing, Jiangsu 210029 ,","institution_ids":["https://openalex.org/I83519826"]},{"raw_affiliation_string":"Department of Medical Informatics, School of Biomedical Engineering and Informatics, Nanjing Medical University , No. 101, Longmian Avenue, Jiangning District, Nanjing, Jiangsu 211166 ,","institution_ids":["https://openalex.org/I83519826"]}]},{"author_position":"middle","author":{"id":"https://openalex.org/A5101424241","display_name":"Shan L\u00fc","orcid":"https://orcid.org/0000-0001-8582-3206"},"institutions":[{"id":"https://openalex.org/I83519826","display_name":"Nanjing Medical University","ror":"https://ror.org/059gcgy73","country_code":"CN","type":"education","lineage":["https://openalex.org/I83519826"]}],"countries":["CN"],"is_corresponding":false,"raw_author_name":"Shan Lu","raw_affiliation_strings":["Women and Children Department, The First Affiliated Hospital, Nanjing Medical University , No. 300, Guangzhou Road, Gulou District, Nanjing, Jiangsu 210029 ,"],"raw_orcid":null,"affiliations":[{"raw_affiliation_string":"Women and Children Department, The First Affiliated Hospital, Nanjing Medical University , No. 300, Guangzhou Road, Gulou District, Nanjing, Jiangsu 210029 ,","institution_ids":["https://openalex.org/I83519826"]}]},{"author_position":"middle","author":{"id":"https://openalex.org/A5046431357","display_name":"Zhuoying Xie","orcid":"https://orcid.org/0000-0003-3534-1924"},"institutions":[],"countries":[],"is_corresponding":false,"raw_author_name":"Zhuoying Xie","raw_affiliation_strings":["Institute for Molecular Medical Technology, State Key Laboratory of Digital Medical Engineering, School of Biological Science and Medical Engineering, Southeast University , No. 2, Southeast University Road, Jiangning District, Nanjing, Jiangsu 211102 ,","Institute of Biomedical Devices (Suzhou), Southeast University , No. 8, Jinfeng Road, Suzhou New District, Suzhou, Jiangsu 215163 ,"],"raw_orcid":"https://orcid.org/0000-0003-3534-1924","affiliations":[{"raw_affiliation_string":"Institute for Molecular Medical Technology, State Key Laboratory of Digital Medical Engineering, School of Biological Science and Medical Engineering, Southeast University , No. 2, Southeast University Road, Jiangning District, Nanjing, Jiangsu 211102 ,","institution_ids":[]},{"raw_affiliation_string":"Institute of Biomedical Devices (Suzhou), Southeast University , No. 8, Jinfeng Road, Suzhou New District, Suzhou, Jiangsu 215163 ,","institution_ids":[]}]},{"author_position":"middle","author":{"id":"https://openalex.org/A5100665996","display_name":"Xin Zhang","orcid":"https://orcid.org/0000-0002-0501-3439"},"institutions":[{"id":"https://openalex.org/I83519826","display_name":"Nanjing Medical University","ror":"https://ror.org/059gcgy73","country_code":"CN","type":"education","lineage":["https://openalex.org/I83519826"]}],"countries":["CN"],"is_corresponding":false,"raw_author_name":"Xin Zhang","raw_affiliation_strings":["Department of Information, The First Affiliated Hospital, Nanjing Medical University , No. 300, Guangzhou Road, Gulou District, Nanjing, Jiangsu 210029 ,","Institute for Molecular Medical Technology, State Key Laboratory of Digital Medical Engineering, School of Biological Science and Medical Engineering, Southeast University , No. 2, Southeast University Road, Jiangning District, Nanjing, Jiangsu 211102 ,","Institute of Biomedical Devices (Suzhou), Southeast University , No. 8, Jinfeng Road, Suzhou New District, Suzhou, Jiangsu 215163 ,"],"raw_orcid":null,"affiliations":[{"raw_affiliation_string":"Department of Information, The First Affiliated Hospital, Nanjing Medical University , No. 300, Guangzhou Road, Gulou District, Nanjing, Jiangsu 210029 ,","institution_ids":["https://openalex.org/I83519826"]},{"raw_affiliation_string":"Institute for Molecular Medical Technology, State Key Laboratory of Digital Medical Engineering, School of Biological Science and Medical Engineering, Southeast University , No. 2, Southeast University Road, Jiangning District, Nanjing, Jiangsu 211102 ,","institution_ids":[]},{"raw_affiliation_string":"Institute of Biomedical Devices (Suzhou), Southeast University , No. 8, Jinfeng Road, Suzhou New District, Suzhou, Jiangsu 215163 ,","institution_ids":[]}]},{"author_position":"last","author":{"id":"https://openalex.org/A5100657451","display_name":"Yun Liu","orcid":"https://orcid.org/0000-0002-2861-0316"},"institutions":[{"id":"https://openalex.org/I83519826","display_name":"Nanjing Medical University","ror":"https://ror.org/059gcgy73","country_code":"CN","type":"education","lineage":["https://openalex.org/I83519826"]}],"countries":["CN"],"is_corresponding":false,"raw_author_name":"Yun Liu","raw_affiliation_strings":["Department of Information, The First Affiliated Hospital, Nanjing Medical University , No. 300, Guangzhou Road, Gulou District, Nanjing, Jiangsu 210029 ,"],"raw_orcid":null,"affiliations":[{"raw_affiliation_string":"Department of Information, The First Affiliated Hospital, Nanjing Medical University , No. 300, Guangzhou Road, Gulou District, Nanjing, Jiangsu 210029 ,","institution_ids":["https://openalex.org/I83519826"]}]}],"institutions":[],"countries_distinct_count":2,"institutions_distinct_count":2,"corresponding_author_ids":[],"corresponding_institution_ids":[],"apc_list":{"value":4011,"currency":"USD","value_usd":4011},"apc_paid":{"value":4011,"currency":"USD","value_usd":4011},"fwci":1.5077,"has_fulltext":true,"cited_by_count":3,"citation_normalized_percentile":{"value":0.80621742,"is_in_top_1_percent":false,"is_in_top_10_percent":false},"cited_by_percentile_year":{"min":95,"max":97},"biblio":{"volume":"26","issue":"2","first_page":null,"last_page":null},"is_retracted":false,"is_paratext":false,"is_xpac":false,"primary_topic":{"id":"https://openalex.org/T10269","display_name":"Epigenetics and DNA Methylation","score":0.9998999834060669,"subfield":{"id":"https://openalex.org/subfields/1312","display_name":"Molecular Biology"},"field":{"id":"https://openalex.org/fields/13","display_name":"Biochemistry, Genetics and Molecular Biology"},"domain":{"id":"https://openalex.org/domains/1","display_name":"Life Sciences"}},"topics":[{"id":"https://openalex.org/T10269","display_name":"Epigenetics and DNA Methylation","score":0.9998999834060669,"subfield":{"id":"https://openalex.org/subfields/1312","display_name":"Molecular Biology"},"field":{"id":"https://openalex.org/fields/13","display_name":"Biochemistry, Genetics and Molecular Biology"},"domain":{"id":"https://openalex.org/domains/1","display_name":"Life Sciences"}},{"id":"https://openalex.org/T10515","display_name":"Cancer-related molecular mechanisms research","score":0.9916999936103821,"subfield":{"id":"https://openalex.org/subfields/1306","display_name":"Cancer Research"},"field":{"id":"https://openalex.org/fields/13","display_name":"Biochemistry, Genetics and Molecular Biology"},"domain":{"id":"https://openalex.org/domains/1","display_name":"Life Sciences"}},{"id":"https://openalex.org/T11482","display_name":"RNA modifications and cancer","score":0.986299991607666,"subfield":{"id":"https://openalex.org/subfields/1312","display_name":"Molecular Biology"},"field":{"id":"https://openalex.org/fields/13","display_name":"Biochemistry, Genetics and Molecular Biology"},"domain":{"id":"https://openalex.org/domains/1","display_name":"Life Sciences"}}],"keywords":[{"id":"https://openalex.org/keywords/subtyping","display_name":"Subtyping","score":0.8052831292152405},{"id":"https://openalex.org/keywords/dna-methylation","display_name":"DNA methylation","score":0.7624989748001099},{"id":"https://openalex.org/keywords/precision-medicine","display_name":"Precision medicine","score":0.6409366130828857},{"id":"https://openalex.org/keywords/computational-biology","display_name":"Computational biology","score":0.6250019073486328},{"id":"https://openalex.org/keywords/methylation","display_name":"Methylation","score":0.6089594960212708},{"id":"https://openalex.org/keywords/disease","display_name":"Disease","score":0.5288107395172119},{"id":"https://openalex.org/keywords/biomarker-discovery","display_name":"Biomarker discovery","score":0.48268556594848633},{"id":"https://openalex.org/keywords/biomarker","display_name":"Biomarker","score":0.4605187177658081},{"id":"https://openalex.org/keywords/weighting","display_name":"Weighting","score":0.448012113571167},{"id":"https://openalex.org/keywords/personalized-medicine","display_name":"Personalized medicine","score":0.44583016633987427},{"id":"https://openalex.org/keywords/human-disease","display_name":"Human disease","score":0.4140489995479584},{"id":"https://openalex.org/keywords/computer-science","display_name":"Computer science","score":0.4072926640510559},{"id":"https://openalex.org/keywords/artificial-intelligence","display_name":"Artificial intelligence","score":0.3889627456665039},{"id":"https://openalex.org/keywords/bioinformatics","display_name":"Bioinformatics","score":0.3656696677207947},{"id":"https://openalex.org/keywords/biology","display_name":"Biology","score":0.3556249737739563},{"id":"https://openalex.org/keywords/medicine","display_name":"Medicine","score":0.26701658964157104},{"id":"https://openalex.org/keywords/dna","display_name":"DNA","score":0.2274416983127594},{"id":"https://openalex.org/keywords/genetics","display_name":"Genetics","score":0.21917641162872314},{"id":"https://openalex.org/keywords/gene","display_name":"Gene","score":0.17945119738578796},{"id":"https://openalex.org/keywords/proteomics","display_name":"Proteomics","score":0.10265636444091797},{"id":"https://openalex.org/keywords/pathology","display_name":"Pathology","score":0.09193477034568787},{"id":"https://openalex.org/keywords/gene-expression","display_name":"Gene expression","score":0.08096295595169067}],"concepts":[{"id":"https://openalex.org/C83852419","wikidata":"https://www.wikidata.org/wiki/Q2713292","display_name":"Subtyping","level":2,"score":0.8052831292152405},{"id":"https://openalex.org/C190727270","wikidata":"https://www.wikidata.org/wiki/Q874745","display_name":"DNA methylation","level":4,"score":0.7624989748001099},{"id":"https://openalex.org/C163763905","wikidata":"https://www.wikidata.org/wiki/Q17075943","display_name":"Precision medicine","level":2,"score":0.6409366130828857},{"id":"https://openalex.org/C70721500","wikidata":"https://www.wikidata.org/wiki/Q177005","display_name":"Computational biology","level":1,"score":0.6250019073486328},{"id":"https://openalex.org/C33288867","wikidata":"https://www.wikidata.org/wiki/Q518328","display_name":"Methylation","level":3,"score":0.6089594960212708},{"id":"https://openalex.org/C2779134260","wikidata":"https://www.wikidata.org/wiki/Q12136","display_name":"Disease","level":2,"score":0.5288107395172119},{"id":"https://openalex.org/C124535831","wikidata":"https://www.wikidata.org/wiki/Q4915074","display_name":"Biomarker discovery","level":4,"score":0.48268556594848633},{"id":"https://openalex.org/C2781197716","wikidata":"https://www.wikidata.org/wiki/Q864574","display_name":"Biomarker","level":2,"score":0.4605187177658081},{"id":"https://openalex.org/C183115368","wikidata":"https://www.wikidata.org/wiki/Q856577","display_name":"Weighting","level":2,"score":0.448012113571167},{"id":"https://openalex.org/C32220436","wikidata":"https://www.wikidata.org/wiki/Q2072214","display_name":"Personalized medicine","level":2,"score":0.44583016633987427},{"id":"https://openalex.org/C2988867146","wikidata":"https://www.wikidata.org/wiki/Q12136","display_name":"Human disease","level":3,"score":0.4140489995479584},{"id":"https://openalex.org/C41008148","wikidata":"https://www.wikidata.org/wiki/Q21198","display_name":"Computer science","level":0,"score":0.4072926640510559},{"id":"https://openalex.org/C154945302","wikidata":"https://www.wikidata.org/wiki/Q11660","display_name":"Artificial intelligence","level":1,"score":0.3889627456665039},{"id":"https://openalex.org/C60644358","wikidata":"https://www.wikidata.org/wiki/Q128570","display_name":"Bioinformatics","level":1,"score":0.3656696677207947},{"id":"https://openalex.org/C86803240","wikidata":"https://www.wikidata.org/wiki/Q420","display_name":"Biology","level":0,"score":0.3556249737739563},{"id":"https://openalex.org/C71924100","wikidata":"https://www.wikidata.org/wiki/Q11190","display_name":"Medicine","level":0,"score":0.26701658964157104},{"id":"https://openalex.org/C552990157","wikidata":"https://www.wikidata.org/wiki/Q7430","display_name":"DNA","level":2,"score":0.2274416983127594},{"id":"https://openalex.org/C54355233","wikidata":"https://www.wikidata.org/wiki/Q7162","display_name":"Genetics","level":1,"score":0.21917641162872314},{"id":"https://openalex.org/C104317684","wikidata":"https://www.wikidata.org/wiki/Q7187","display_name":"Gene","level":2,"score":0.17945119738578796},{"id":"https://openalex.org/C46111723","wikidata":"https://www.wikidata.org/wiki/Q471857","display_name":"Proteomics","level":3,"score":0.10265636444091797},{"id":"https://openalex.org/C142724271","wikidata":"https://www.wikidata.org/wiki/Q7208","display_name":"Pathology","level":1,"score":0.09193477034568787},{"id":"https://openalex.org/C150194340","wikidata":"https://www.wikidata.org/wiki/Q26972","display_name":"Gene expression","level":3,"score":0.08096295595169067},{"id":"https://openalex.org/C126838900","wikidata":"https://www.wikidata.org/wiki/Q77604","display_name":"Radiology","level":1,"score":0.0},{"id":"https://openalex.org/C199360897","wikidata":"https://www.wikidata.org/wiki/Q9143","display_name":"Programming language","level":1,"score":0.0}],"mesh":[{"descriptor_ui":"D000077321","descriptor_name":"Deep Learning","qualifier_ui":null,"qualifier_name":null,"is_major_topic":true},{"descriptor_ui":"D000077321","descriptor_name":"Deep Learning","qualifier_ui":null,"qualifier_name":null,"is_major_topic":true},{"descriptor_ui":"D000077321","descriptor_name":"Deep Learning","qualifier_ui":null,"qualifier_name":null,"is_major_topic":true},{"descriptor_ui":"D000077321","descriptor_name":"Deep Learning","qualifier_ui":null,"qualifier_name":null,"is_major_topic":true},{"descriptor_ui":"D000077321","descriptor_name":"Deep Learning","qualifier_ui":null,"qualifier_name":null,"is_major_topic":true},{"descriptor_ui":"D006801","descriptor_name":"Humans","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D006801","descriptor_name":"Humans","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D006801","descriptor_name":"Humans","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D006801","descriptor_name":"Humans","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D006801","descriptor_name":"Humans","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D015415","descriptor_name":"Biomarkers","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D015415","descriptor_name":"Biomarkers","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D019175","descriptor_name":"DNA Methylation","qualifier_ui":null,"qualifier_name":null,"is_major_topic":true},{"descriptor_ui":"D019175","descriptor_name":"DNA Methylation","qualifier_ui":null,"qualifier_name":null,"is_major_topic":true},{"descriptor_ui":"D019175","descriptor_name":"DNA Methylation","qualifier_ui":null,"qualifier_name":null,"is_major_topic":true},{"descriptor_ui":"D019175","descriptor_name":"DNA Methylation","qualifier_ui":null,"qualifier_name":null,"is_major_topic":true},{"descriptor_ui":"D019175","descriptor_name":"DNA Methylation","qualifier_ui":null,"qualifier_name":null,"is_major_topic":true},{"descriptor_ui":"D019295","descriptor_name":"Computational Biology","qualifier_ui":"Q000379","qualifier_name":"methods","is_major_topic":false},{"descriptor_ui":"D019295","descriptor_name":"Computational Biology","qualifier_ui":"Q000379","qualifier_name":"methods","is_major_topic":false},{"descriptor_ui":"D019295","descriptor_name":"Computational Biology","qualifier_ui":"Q000379","qualifier_name":"methods","is_major_topic":true},{"descriptor_ui":"D019295","descriptor_name":"Computational Biology","qualifier_ui":"Q000379","qualifier_name":"methods","is_major_topic":false},{"descriptor_ui":"D019295","descriptor_name":"Computational Biology","qualifier_ui":"Q000379","qualifier_name":"methods","is_major_topic":true},{"descriptor_ui":"D057285","descriptor_name":"Precision Medicine","qualifier_ui":"Q000379","qualifier_name":"methods","is_major_topic":true},{"descriptor_ui":"D057285","descriptor_name":"Precision Medicine","qualifier_ui":"Q000379","qualifier_name":"methods","is_major_topic":true},{"descriptor_ui":"D057285","descriptor_name":"Precision Medicine","qualifier_ui":"Q000379","qualifier_name":"methods","is_major_topic":true},{"descriptor_ui":"D057285","descriptor_name":"Precision Medicine","qualifier_ui":"Q000379","qualifier_name":"methods","is_major_topic":true},{"descriptor_ui":"D057285","descriptor_name":"Precision Medicine","qualifier_ui":"Q000379","qualifier_name":"methods","is_major_topic":true}],"locations_count":3,"locations":[{"id":"doi:10.1093/bib/bbaf131","is_oa":true,"landing_page_url":"https://doi.org/10.1093/bib/bbaf131","pdf_url":"https://academic.oup.com/bib/article-pdf/26/2/bbaf131/62699988/bbaf131.pdf","source":{"id":"https://openalex.org/S91767247","display_name":"Briefings in Bioinformatics","issn_l":"1467-5463","issn":["1467-5463","1477-4054"],"is_oa":true,"is_in_doaj":true,"is_core":true,"host_organization":"https://openalex.org/P4310311648","host_organization_name":"Oxford University Press","host_organization_lineage":["https://openalex.org/P4310311648","https://openalex.org/P4310311647"],"host_organization_lineage_names":["Oxford University Press","University of Oxford"],"type":"journal"},"license":"cc-by-nc","license_id":"https://openalex.org/licenses/cc-by-nc","version":"publishedVersion","is_accepted":true,"is_published":true,"raw_source_name":"Briefings in Bioinformatics","raw_type":"journal-article"},{"id":"pmid:40131311","is_oa":false,"landing_page_url":"https://pubmed.ncbi.nlm.nih.gov/40131311","pdf_url":null,"source":{"id":"https://openalex.org/S4306525036","display_name":"PubMed","issn_l":null,"issn":null,"is_oa":false,"is_in_doaj":false,"is_core":false,"host_organization":"https://openalex.org/I1299303238","host_organization_name":"National Institutes of Health","host_organization_lineage":["https://openalex.org/I1299303238"],"host_organization_lineage_names":[],"type":"repository"},"license":null,"license_id":null,"version":"publishedVersion","is_accepted":true,"is_published":true,"raw_source_name":"Briefings in bioinformatics","raw_type":null},{"id":"pmh:oai:pubmedcentral.nih.gov:11934576","is_oa":true,"landing_page_url":"https://www.ncbi.nlm.nih.gov/pmc/articles/11934576","pdf_url":null,"source":{"id":"https://openalex.org/S2764455111","display_name":"PubMed Central","issn_l":null,"issn":null,"is_oa":true,"is_in_doaj":false,"is_core":false,"host_organization":"https://openalex.org/I1299303238","host_organization_name":"National Institutes of Health","host_organization_lineage":["https://openalex.org/I1299303238"],"host_organization_lineage_names":[],"type":"repository"},"license":"other-oa","license_id":"https://openalex.org/licenses/other-oa","version":"submittedVersion","is_accepted":false,"is_published":false,"raw_source_name":"Brief Bioinform","raw_type":"Text"}],"best_oa_location":{"id":"doi:10.1093/bib/bbaf131","is_oa":true,"landing_page_url":"https://doi.org/10.1093/bib/bbaf131","pdf_url":"https://academic.oup.com/bib/article-pdf/26/2/bbaf131/62699988/bbaf131.pdf","source":{"id":"https://openalex.org/S91767247","display_name":"Briefings in Bioinformatics","issn_l":"1467-5463","issn":["1467-5463","1477-4054"],"is_oa":true,"is_in_doaj":true,"is_core":true,"host_organization":"https://openalex.org/P4310311648","host_organization_name":"Oxford University Press","host_organization_lineage":["https://openalex.org/P4310311648","https://openalex.org/P4310311647"],"host_organization_lineage_names":["Oxford University Press","University of Oxford"],"type":"journal"},"license":"cc-by-nc","license_id":"https://openalex.org/licenses/cc-by-nc","version":"publishedVersion","is_accepted":true,"is_published":true,"raw_source_name":"Briefings in Bioinformatics","raw_type":"journal-article"},"sustainable_development_goals":[],"awards":[{"id":"https://openalex.org/G2118446501","display_name":null,"funder_award_id":"SJC2023005","funder_id":"https://openalex.org/F4320336618","funder_display_name":"Science and Technology Program of Suzhou"},{"id":"https://openalex.org/G3496496866","display_name":null,"funder_award_id":"BK20222008","funder_id":"https://openalex.org/F4320322769","funder_display_name":"Natural Science Foundation of Jiangsu Province"},{"id":"https://openalex.org/G6892260958","display_name":null,"funder_award_id":"2242023\u00a0K5005","funder_id":"https://openalex.org/F4320335787","funder_display_name":"Fundamental Research Funds for the Central Universities"}],"funders":[{"id":"https://openalex.org/F4320321540","display_name":"Ministry of Science and Technology of the People's Republic of China","ror":"https://ror.org/027s68j25"},{"id":"https://openalex.org/F4320321605","display_name":"Government of Jiangsu Province","ror":"https://ror.org/004svx814"},{"id":"https://openalex.org/F4320322769","display_name":"Natural Science Foundation of Jiangsu Province","ror":"https://ror.org/01h0zpd94"},{"id":"https://openalex.org/F4320335787","display_name":"Fundamental Research Funds for the Central Universities","ror":null},{"id":"https://openalex.org/F4320336618","display_name":"Science and Technology Program of Suzhou","ror":null}],"has_content":{"grobid_xml":true,"pdf":true},"content_urls":{"pdf":"https://content.openalex.org/works/W4408845911.pdf","grobid_xml":"https://content.openalex.org/works/W4408845911.grobid-xml"},"referenced_works_count":79,"referenced_works":["https://openalex.org/W2092513839","https://openalex.org/W2106029302","https://openalex.org/W2123032740","https://openalex.org/W2147527908","https://openalex.org/W2152970345","https://openalex.org/W2567465856","https://openalex.org/W2749613778","https://openalex.org/W2767572999","https://openalex.org/W2801829353","https://openalex.org/W2808686685","https://openalex.org/W2899283552","https://openalex.org/W3026114757","https://openalex.org/W3052098647","https://openalex.org/W3093030756","https://openalex.org/W3097173659","https://openalex.org/W3134090825","https://openalex.org/W3143789190","https://openalex.org/W3168958685","https://openalex.org/W3171689169","https://openalex.org/W3179782236","https://openalex.org/W3192937289","https://openalex.org/W3209616180","https://openalex.org/W3210378911","https://openalex.org/W3213323683","https://openalex.org/W3217763658","https://openalex.org/W4200022653","https://openalex.org/W4200292058","https://openalex.org/W4200310000","https://openalex.org/W4206952684","https://openalex.org/W4210548518","https://openalex.org/W4213246082","https://openalex.org/W4213277551","https://openalex.org/W4220709913","https://openalex.org/W4220946048","https://openalex.org/W4225129690","https://openalex.org/W4225995462","https://openalex.org/W4226309458","https://openalex.org/W4226492252","https://openalex.org/W4283513859","https://openalex.org/W4283785215","https://openalex.org/W4292263641","https://openalex.org/W4311823641","https://openalex.org/W4313458568","https://openalex.org/W4319827264","https://openalex.org/W4321201797","https://openalex.org/W4322770791","https://openalex.org/W4361278700","https://openalex.org/W4362601452","https://openalex.org/W4381157939","https://openalex.org/W4383557885","https://openalex.org/W4384132443","https://openalex.org/W4386022831","https://openalex.org/W4386707820","https://openalex.org/W4387908880","https://openalex.org/W4387966296","https://openalex.org/W4388692467","https://openalex.org/W4389130251","https://openalex.org/W4391005914","https://openalex.org/W4391365195","https://openalex.org/W4392553889","https://openalex.org/W4392817440","https://openalex.org/W4393392390","https://openalex.org/W4396591803","https://openalex.org/W4396704286","https://openalex.org/W4398766243","https://openalex.org/W4399444979","https://openalex.org/W4400265737","https://openalex.org/W4400640382","https://openalex.org/W4401009333","https://openalex.org/W4401806228","https://openalex.org/W4403335352","https://openalex.org/W4404204640","https://openalex.org/W4405967781","https://openalex.org/W4406015293","https://openalex.org/W4406432943","https://openalex.org/W4406443964","https://openalex.org/W4406597242","https://openalex.org/W4406715738","https://openalex.org/W4406766910"],"related_works":["https://openalex.org/W3082935376","https://openalex.org/W4399651953","https://openalex.org/W4386960999","https://openalex.org/W2899657781","https://openalex.org/W4322484660","https://openalex.org/W3193951088","https://openalex.org/W4388011470","https://openalex.org/W4230423494","https://openalex.org/W4403376686","https://openalex.org/W4298001029"],"abstract_inverted_index":{"DNA":[0,47],"methylation":[1,42,76],"plays":[2],"a":[3],"crucial":[4],"role":[5],"in":[6],"human":[7],"diseases":[8],"pathogenesis.":[9],"Substantial":[10],"experimental":[11],"evidence":[12],"from":[13,45],"clinical":[14],"and":[15,35,50,67],"biological":[16],"studies":[17],"has":[18],"confirmed":[19],"numerous":[20],"methylation-disease":[21,48],"associations,":[22],"which":[23],"provide":[24],"valuable":[25],"prior":[26,43],"knowledge":[27,44],"for":[28,55],"advancing":[29],"precision":[30,56],"medicine":[31,57],"through":[32],"biomarker":[33],"discovery":[34],"disease":[36,83],"subtyping.":[37],"To":[38],"systematically":[39],"mine":[40],"reliable":[41,75],"known":[46],"associations":[49],"develop":[51],"robust":[52],"computational":[53],"methods":[54],"applications,":[58],"we":[59],"propose":[60],"MethPriorGCN.":[61],"By":[62],"integrating":[63],"layer":[64],"attention":[65],"mechanisms":[66],"feature":[68],"weighting":[69],"mechanisms,":[70],"MethPriorGCN":[71],"not":[72],"only":[73],"identified":[74],"digital":[77],"biomarkers":[78],"but":[79],"also":[80],"achieved":[81],"superior":[82],"subtype":[84],"classification":[85],"accuracy.":[86]},"counts_by_year":[{"year":2026,"cited_by_count":1},{"year":2025,"cited_by_count":2}],"updated_date":"2026-07-05T07:55:05.734416","created_date":"2025-10-10T00:00:00"}
