{"id":"https://openalex.org/W4408291663","doi":"https://doi.org/10.1093/bib/bbaf084","title":"VITALdb: to select the best viroinformatics tools for a desired virus or application","display_name":"VITALdb: to select the best viroinformatics tools for a desired virus or application","publication_year":2025,"publication_date":"2025-03-01","ids":{"openalex":"https://openalex.org/W4408291663","doi":"https://doi.org/10.1093/bib/bbaf084","pmid":"https://pubmed.ncbi.nlm.nih.gov/40063348"},"language":"en","primary_location":{"id":"doi:10.1093/bib/bbaf084","is_oa":true,"landing_page_url":"https://doi.org/10.1093/bib/bbaf084","pdf_url":"https://academic.oup.com/bib/article-pdf/26/2/bbaf084/62366947/bbaf084.pdf","source":{"id":"https://openalex.org/S91767247","display_name":"Briefings in Bioinformatics","issn_l":"1467-5463","issn":["1467-5463","1477-4054"],"is_oa":true,"is_in_doaj":true,"is_core":true,"host_organization":"https://openalex.org/P4310311648","host_organization_name":"Oxford University Press","host_organization_lineage":["https://openalex.org/P4310311648","https://openalex.org/P4310311647"],"host_organization_lineage_names":["Oxford University Press","University of Oxford"],"type":"journal"},"license":null,"license_id":null,"version":"publishedVersion","is_accepted":true,"is_published":true,"raw_source_name":"Briefings in Bioinformatics","raw_type":"journal-article"},"type":"article","indexed_in":["crossref","doaj","pubmed"],"open_access":{"is_oa":true,"oa_status":"gold","oa_url":"https://academic.oup.com/bib/article-pdf/26/2/bbaf084/62366947/bbaf084.pdf","any_repository_has_fulltext":true},"authorships":[{"author_position":"first","author":{"id":"https://openalex.org/A5054783387","display_name":"M. K. Koul","orcid":null},"institutions":[{"id":"https://openalex.org/I154851008","display_name":"Indian Institute of Technology Roorkee","ror":"https://ror.org/00582g326","country_code":"IN","type":"education","lineage":["https://openalex.org/I154851008"]}],"countries":["IN"],"is_corresponding":true,"raw_author_name":"Mira Koul","raw_affiliation_strings":["Computational Biology and Translational Bioinformatics (CBTB) Laboratory, Department of Biosciences and Bioengineering, Indian Institute of Technology Roorkee , Roorkee 247667, Uttarakhand ,","Computational Biology and Translational Bioinformatics (CBTB) Laboratory, Department of Biosciences and Bioengineering, Indian Institute of Technology Roorkee, Roorkee 247667, Uttarakhand, India"],"affiliations":[{"raw_affiliation_string":"Computational Biology and Translational Bioinformatics (CBTB) Laboratory, Department of Biosciences and Bioengineering, Indian Institute of Technology Roorkee , Roorkee 247667, Uttarakhand ,","institution_ids":["https://openalex.org/I154851008"]},{"raw_affiliation_string":"Computational Biology and Translational Bioinformatics (CBTB) Laboratory, Department of Biosciences and Bioengineering, Indian Institute of Technology Roorkee, Roorkee 247667, Uttarakhand, India","institution_ids":["https://openalex.org/I154851008"]}]},{"author_position":"middle","author":{"id":"https://openalex.org/A5086242762","display_name":"Shalini kaushik","orcid":null},"institutions":[{"id":"https://openalex.org/I154851008","display_name":"Indian Institute of Technology Roorkee","ror":"https://ror.org/00582g326","country_code":"IN","type":"education","lineage":["https://openalex.org/I154851008"]}],"countries":["IN"],"is_corresponding":false,"raw_author_name":"Shalini Kaushik","raw_affiliation_strings":["Computational Biology and Translational Bioinformatics (CBTB) Laboratory, Department of Biosciences and Bioengineering, Indian Institute of Technology Roorkee , Roorkee 247667, Uttarakhand ,","Computational Biology and Translational Bioinformatics (CBTB) Laboratory, Department of Biosciences and Bioengineering, Indian Institute of Technology Roorkee, Roorkee 247667, Uttarakhand, India"],"affiliations":[{"raw_affiliation_string":"Computational Biology and Translational Bioinformatics (CBTB) Laboratory, Department of Biosciences and Bioengineering, Indian Institute of Technology Roorkee , Roorkee 247667, Uttarakhand ,","institution_ids":["https://openalex.org/I154851008"]},{"raw_affiliation_string":"Computational Biology and Translational Bioinformatics (CBTB) Laboratory, Department of Biosciences and Bioengineering, Indian Institute of Technology Roorkee, Roorkee 247667, Uttarakhand, India","institution_ids":["https://openalex.org/I154851008"]}]},{"author_position":"middle","author":{"id":"https://openalex.org/A5114205024","display_name":"Kavya Singh","orcid":null},"institutions":[{"id":"https://openalex.org/I154851008","display_name":"Indian Institute of Technology Roorkee","ror":"https://ror.org/00582g326","country_code":"IN","type":"education","lineage":["https://openalex.org/I154851008"]}],"countries":["IN"],"is_corresponding":false,"raw_author_name":"Kavya Singh","raw_affiliation_strings":["Computational Biology and Translational Bioinformatics (CBTB) Laboratory, Department of Biosciences and Bioengineering, Indian Institute of Technology Roorkee , Roorkee 247667, Uttarakhand ,","Computational Biology and Translational Bioinformatics (CBTB) Laboratory, Department of Biosciences and Bioengineering, Indian Institute of Technology Roorkee, Roorkee 247667, Uttarakhand, India"],"affiliations":[{"raw_affiliation_string":"Computational Biology and Translational Bioinformatics (CBTB) Laboratory, Department of Biosciences and Bioengineering, Indian Institute of Technology Roorkee , Roorkee 247667, Uttarakhand ,","institution_ids":["https://openalex.org/I154851008"]},{"raw_affiliation_string":"Computational Biology and Translational Bioinformatics (CBTB) Laboratory, Department of Biosciences and Bioengineering, Indian Institute of Technology Roorkee, Roorkee 247667, Uttarakhand, India","institution_ids":["https://openalex.org/I154851008"]}]},{"author_position":"last","author":{"id":"https://openalex.org/A5100786504","display_name":"Deepak Sharma","orcid":"https://orcid.org/0000-0002-9338-6074"},"institutions":[{"id":"https://openalex.org/I154851008","display_name":"Indian Institute of Technology Roorkee","ror":"https://ror.org/00582g326","country_code":"IN","type":"education","lineage":["https://openalex.org/I154851008"]}],"countries":["IN"],"is_corresponding":false,"raw_author_name":"Deepak Sharma","raw_affiliation_strings":["Computational Biology and Translational Bioinformatics (CBTB) Laboratory, Department of Biosciences and Bioengineering, Indian Institute of Technology Roorkee , Roorkee 247667, Uttarakhand ,","Computational Biology and Translational Bioinformatics (CBTB) Laboratory, Department of Biosciences and Bioengineering, Indian Institute of Technology Roorkee, Roorkee 247667, Uttarakhand, India"],"affiliations":[{"raw_affiliation_string":"Computational Biology and Translational Bioinformatics (CBTB) Laboratory, Department of Biosciences and Bioengineering, Indian Institute of Technology Roorkee , Roorkee 247667, Uttarakhand ,","institution_ids":["https://openalex.org/I154851008"]},{"raw_affiliation_string":"Computational Biology and Translational Bioinformatics (CBTB) Laboratory, Department of Biosciences and Bioengineering, Indian Institute of Technology Roorkee, Roorkee 247667, Uttarakhand, India","institution_ids":["https://openalex.org/I154851008"]}]}],"institutions":[],"countries_distinct_count":1,"institutions_distinct_count":4,"corresponding_author_ids":["https://openalex.org/A5054783387"],"corresponding_institution_ids":["https://openalex.org/I154851008"],"apc_list":{"value":4011,"currency":"USD","value_usd":4011},"apc_paid":{"value":4011,"currency":"USD","value_usd":4011},"fwci":0.755,"has_fulltext":false,"cited_by_count":1,"citation_normalized_percentile":{"value":0.68622082,"is_in_top_1_percent":false,"is_in_top_10_percent":false},"cited_by_percentile_year":{"min":91,"max":95},"biblio":{"volume":"26","issue":"2","first_page":null,"last_page":null},"is_retracted":false,"is_paratext":false,"is_xpac":false,"primary_topic":{"id":"https://openalex.org/T12576","display_name":"vaccines and immunoinformatics approaches","score":0.9991000294685364,"subfield":{"id":"https://openalex.org/subfields/1312","display_name":"Molecular Biology"},"field":{"id":"https://openalex.org/fields/13","display_name":"Biochemistry, Genetics and Molecular Biology"},"domain":{"id":"https://openalex.org/domains/1","display_name":"Life Sciences"}},"topics":[{"id":"https://openalex.org/T12576","display_name":"vaccines and immunoinformatics approaches","score":0.9991000294685364,"subfield":{"id":"https://openalex.org/subfields/1312","display_name":"Molecular Biology"},"field":{"id":"https://openalex.org/fields/13","display_name":"Biochemistry, Genetics and Molecular Biology"},"domain":{"id":"https://openalex.org/domains/1","display_name":"Life Sciences"}},{"id":"https://openalex.org/T10494","display_name":"Plant Virus Research Studies","score":0.9988999962806702,"subfield":{"id":"https://openalex.org/subfields/1110","display_name":"Plant Science"},"field":{"id":"https://openalex.org/fields/11","display_name":"Agricultural and Biological Sciences"},"domain":{"id":"https://openalex.org/domains/1","display_name":"Life Sciences"}},{"id":"https://openalex.org/T11048","display_name":"Bacteriophages and microbial interactions","score":0.9977999925613403,"subfield":{"id":"https://openalex.org/subfields/2303","display_name":"Ecology"},"field":{"id":"https://openalex.org/fields/23","display_name":"Environmental Science"},"domain":{"id":"https://openalex.org/domains/3","display_name":"Physical Sciences"}}],"keywords":[{"id":"https://openalex.org/keywords/ebola-virus","display_name":"Ebola virus","score":0.7315793037414551},{"id":"https://openalex.org/keywords/virology","display_name":"Virology","score":0.5991594791412354},{"id":"https://openalex.org/keywords/virus","display_name":"Virus","score":0.5847114324569702},{"id":"https://openalex.org/keywords/zika-virus","display_name":"Zika virus","score":0.5349750518798828},{"id":"https://openalex.org/keywords/pandemic","display_name":"Pandemic","score":0.46498435735702515},{"id":"https://openalex.org/keywords/biology","display_name":"Biology","score":0.44084393978118896},{"id":"https://openalex.org/keywords/metagenomics","display_name":"Metagenomics","score":0.43438515067100525},{"id":"https://openalex.org/keywords/dengue-virus","display_name":"Dengue virus","score":0.42437124252319336},{"id":"https://openalex.org/keywords/computational-biology","display_name":"Computational biology","score":0.34337636828422546},{"id":"https://openalex.org/keywords/disease","display_name":"Disease","score":0.25925949215888977},{"id":"https://openalex.org/keywords/coronavirus-disease-2019","display_name":"Coronavirus disease 2019 (COVID-19)","score":0.17916026711463928},{"id":"https://openalex.org/keywords/medicine","display_name":"Medicine","score":0.1740938127040863},{"id":"https://openalex.org/keywords/infectious-disease","display_name":"Infectious disease (medical specialty)","score":0.1625632643699646},{"id":"https://openalex.org/keywords/genetics","display_name":"Genetics","score":0.09819373488426208},{"id":"https://openalex.org/keywords/gene","display_name":"Gene","score":0.08248743414878845}],"concepts":[{"id":"https://openalex.org/C2777469322","wikidata":"https://www.wikidata.org/wiki/Q8064876","display_name":"Ebola virus","level":3,"score":0.7315793037414551},{"id":"https://openalex.org/C159047783","wikidata":"https://www.wikidata.org/wiki/Q7215","display_name":"Virology","level":1,"score":0.5991594791412354},{"id":"https://openalex.org/C2522874641","wikidata":"https://www.wikidata.org/wiki/Q808","display_name":"Virus","level":2,"score":0.5847114324569702},{"id":"https://openalex.org/C2777053367","wikidata":"https://www.wikidata.org/wiki/Q202864","display_name":"Zika virus","level":3,"score":0.5349750518798828},{"id":"https://openalex.org/C89623803","wikidata":"https://www.wikidata.org/wiki/Q12184","display_name":"Pandemic","level":5,"score":0.46498435735702515},{"id":"https://openalex.org/C86803240","wikidata":"https://www.wikidata.org/wiki/Q420","display_name":"Biology","level":0,"score":0.44084393978118896},{"id":"https://openalex.org/C15151743","wikidata":"https://www.wikidata.org/wiki/Q903778","display_name":"Metagenomics","level":3,"score":0.43438515067100525},{"id":"https://openalex.org/C2779635636","wikidata":"https://www.wikidata.org/wiki/Q476209","display_name":"Dengue virus","level":3,"score":0.42437124252319336},{"id":"https://openalex.org/C70721500","wikidata":"https://www.wikidata.org/wiki/Q177005","display_name":"Computational biology","level":1,"score":0.34337636828422546},{"id":"https://openalex.org/C2779134260","wikidata":"https://www.wikidata.org/wiki/Q12136","display_name":"Disease","level":2,"score":0.25925949215888977},{"id":"https://openalex.org/C3008058167","wikidata":"https://www.wikidata.org/wiki/Q84263196","display_name":"Coronavirus disease 2019 (COVID-19)","level":4,"score":0.17916026711463928},{"id":"https://openalex.org/C71924100","wikidata":"https://www.wikidata.org/wiki/Q11190","display_name":"Medicine","level":0,"score":0.1740938127040863},{"id":"https://openalex.org/C524204448","wikidata":"https://www.wikidata.org/wiki/Q788926","display_name":"Infectious disease (medical specialty)","level":3,"score":0.1625632643699646},{"id":"https://openalex.org/C54355233","wikidata":"https://www.wikidata.org/wiki/Q7162","display_name":"Genetics","level":1,"score":0.09819373488426208},{"id":"https://openalex.org/C104317684","wikidata":"https://www.wikidata.org/wiki/Q7187","display_name":"Gene","level":2,"score":0.08248743414878845},{"id":"https://openalex.org/C142724271","wikidata":"https://www.wikidata.org/wiki/Q7208","display_name":"Pathology","level":1,"score":0.0}],"mesh":[{"descriptor_ui":"D000086382","descriptor_name":"COVID-19","qualifier_ui":"Q000453","qualifier_name":"epidemiology","is_major_topic":false},{"descriptor_ui":"D000086382","descriptor_name":"COVID-19","qualifier_ui":"Q000453","qualifier_name":"epidemiology","is_major_topic":false},{"descriptor_ui":"D000086382","descriptor_name":"COVID-19","qualifier_ui":"Q000821","qualifier_name":"virology","is_major_topic":false},{"descriptor_ui":"D000086382","descriptor_name":"COVID-19","qualifier_ui":"Q000821","qualifier_name":"virology","is_major_topic":false},{"descriptor_ui":"D000086382","descriptor_name":"COVID-19","qualifier_ui":"Q000821","qualifier_name":"virology","is_major_topic":false},{"descriptor_ui":"D000086382","descriptor_name":"COVID-19","qualifier_ui":"Q000821","qualifier_name":"virology","is_major_topic":false},{"descriptor_ui":"D000086382","descriptor_name":"COVID-19","qualifier_ui":"Q000821","qualifier_name":"virology","is_major_topic":false},{"descriptor_ui":"D000086402","descriptor_name":"SARS-CoV-2","qualifier_ui":"Q000235","qualifier_name":"genetics","is_major_topic":false},{"descriptor_ui":"D000086402","descriptor_name":"SARS-CoV-2","qualifier_ui":"Q000235","qualifier_name":"genetics","is_major_topic":false},{"descriptor_ui":"D000086402","descriptor_name":"SARS-CoV-2","qualifier_ui":"Q000235","qualifier_name":"genetics","is_major_topic":false},{"descriptor_ui":"D000086402","descriptor_name":"SARS-CoV-2","qualifier_ui":"Q000235","qualifier_name":"genetics","is_major_topic":false},{"descriptor_ui":"D000086402","descriptor_name":"SARS-CoV-2","qualifier_ui":"Q000235","qualifier_name":"genetics","is_major_topic":false},{"descriptor_ui":"D000465","descriptor_name":"Algorithms","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D000465","descriptor_name":"Algorithms","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D000465","descriptor_name":"Algorithms","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D000465","descriptor_name":"Algorithms","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D000465","descriptor_name":"Algorithms","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D000818","descriptor_name":"Animals","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D000818","descriptor_name":"Animals","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D000818","descriptor_name":"Animals","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D000998","descriptor_name":"Antiviral Agents","qualifier_ui":"Q000494","qualifier_name":"pharmacology","is_major_topic":false},{"descriptor_ui":"D000998","descriptor_name":"Antiviral Agents","qualifier_ui":"Q000494","qualifier_name":"pharmacology","is_major_topic":false},{"descriptor_ui":"D000998","descriptor_name":"Antiviral Agents","qualifier_ui":"Q000494","qualifier_name":"pharmacology","is_major_topic":false},{"descriptor_ui":"D000998","descriptor_name":"Antiviral Agents","qualifier_ui":"Q000627","qualifier_name":"therapeutic use","is_major_topic":false},{"descriptor_ui":"D000998","descriptor_name":"Antiviral Agents","qualifier_ui":"Q000627","qualifier_name":"therapeutic use","is_major_topic":false},{"descriptor_ui":"D000998","descriptor_name":"Antiviral Agents","qualifier_ui":"Q000627","qualifier_name":"therapeutic use","is_major_topic":false},{"descriptor_ui":"D000998","descriptor_name":"Antiviral Agents","qualifier_ui":"Q000627","qualifier_name":"therapeutic use","is_major_topic":false},{"descriptor_ui":"D000998","descriptor_name":"Antiviral Agents","qualifier_ui":"Q000627","qualifier_name":"therapeutic use","is_major_topic":false},{"descriptor_ui":"D006801","descriptor_name":"Humans","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D006801","descriptor_name":"Humans","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D006801","descriptor_name":"Humans","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D006801","descriptor_name":"Humans","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D006801","descriptor_name":"Humans","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D010802","descriptor_name":"Phylogeny","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D010802","descriptor_name":"Phylogeny","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D010802","descriptor_name":"Phylogeny","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D012984","descriptor_name":"Software","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D012984","descriptor_name":"Software","qualifier_ui":null,"qualifier_name":null,"is_major_topic":true},{"descriptor_ui":"D012984","descriptor_name":"Software","qualifier_ui":null,"qualifier_name":null,"is_major_topic":true},{"descriptor_ui":"D012984","descriptor_name":"Software","qualifier_ui":null,"qualifier_name":null,"is_major_topic":true},{"descriptor_ui":"D012984","descriptor_name":"Software","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D014777","descriptor_name":"Virus Diseases","qualifier_ui":"Q000821","qualifier_name":"virology","is_major_topic":false},{"descriptor_ui":"D014777","descriptor_name":"Virus Diseases","qualifier_ui":"Q000821","qualifier_name":"virology","is_major_topic":true},{"descriptor_ui":"D014777","descriptor_name":"Virus Diseases","qualifier_ui":"Q000821","qualifier_name":"virology","is_major_topic":true},{"descriptor_ui":"D014777","descriptor_name":"Virus Diseases","qualifier_ui":"Q000821","qualifier_name":"virology","is_major_topic":true},{"descriptor_ui":"D014777","descriptor_name":"Virus Diseases","qualifier_ui":"Q000821","qualifier_name":"virology","is_major_topic":false},{"descriptor_ui":"D014780","descriptor_name":"Viruses","qualifier_ui":"Q000145","qualifier_name":"classification","is_major_topic":false},{"descriptor_ui":"D014780","descriptor_name":"Viruses","qualifier_ui":"Q000145","qualifier_name":"classification","is_major_topic":false},{"descriptor_ui":"D014780","descriptor_name":"Viruses","qualifier_ui":"Q000235","qualifier_name":"genetics","is_major_topic":false},{"descriptor_ui":"D014780","descriptor_name":"Viruses","qualifier_ui":"Q000235","qualifier_name":"genetics","is_major_topic":true},{"descriptor_ui":"D014780","descriptor_name":"Viruses","qualifier_ui":"Q000235","qualifier_name":"genetics","is_major_topic":true},{"descriptor_ui":"D014780","descriptor_name":"Viruses","qualifier_ui":"Q000235","qualifier_name":"genetics","is_major_topic":true},{"descriptor_ui":"D014780","descriptor_name":"Viruses","qualifier_ui":"Q000235","qualifier_name":"genetics","is_major_topic":false},{"descriptor_ui":"D019295","descriptor_name":"Computational Biology","qualifier_ui":"Q000379","qualifier_name":"methods","is_major_topic":true},{"descriptor_ui":"D019295","descriptor_name":"Computational Biology","qualifier_ui":"Q000379","qualifier_name":"methods","is_major_topic":true},{"descriptor_ui":"D019295","descriptor_name":"Computational Biology","qualifier_ui":"Q000379","qualifier_name":"methods","is_major_topic":true},{"descriptor_ui":"D019295","descriptor_name":"Computational Biology","qualifier_ui":"Q000379","qualifier_name":"methods","is_major_topic":true},{"descriptor_ui":"D019295","descriptor_name":"Computational Biology","qualifier_ui":"Q000379","qualifier_name":"methods","is_major_topic":true}],"locations_count":3,"locations":[{"id":"doi:10.1093/bib/bbaf084","is_oa":true,"landing_page_url":"https://doi.org/10.1093/bib/bbaf084","pdf_url":"https://academic.oup.com/bib/article-pdf/26/2/bbaf084/62366947/bbaf084.pdf","source":{"id":"https://openalex.org/S91767247","display_name":"Briefings in Bioinformatics","issn_l":"1467-5463","issn":["1467-5463","1477-4054"],"is_oa":true,"is_in_doaj":true,"is_core":true,"host_organization":"https://openalex.org/P4310311648","host_organization_name":"Oxford University Press","host_organization_lineage":["https://openalex.org/P4310311648","https://openalex.org/P4310311647"],"host_organization_lineage_names":["Oxford University Press","University of Oxford"],"type":"journal"},"license":null,"license_id":null,"version":"publishedVersion","is_accepted":true,"is_published":true,"raw_source_name":"Briefings in Bioinformatics","raw_type":"journal-article"},{"id":"pmid:40063348","is_oa":false,"landing_page_url":"https://pubmed.ncbi.nlm.nih.gov/40063348","pdf_url":null,"source":{"id":"https://openalex.org/S4306525036","display_name":"PubMed","issn_l":null,"issn":null,"is_oa":false,"is_in_doaj":false,"is_core":false,"host_organization":"https://openalex.org/I1299303238","host_organization_name":"National Institutes of Health","host_organization_lineage":["https://openalex.org/I1299303238"],"host_organization_lineage_names":[],"type":"repository"},"license":null,"license_id":null,"version":"publishedVersion","is_accepted":true,"is_published":true,"raw_source_name":"Briefings in bioinformatics","raw_type":null},{"id":"pmh:oai:europepmc.org:10704494","is_oa":true,"landing_page_url":"https://www.ncbi.nlm.nih.gov/pmc/articles/11892104","pdf_url":null,"source":{"id":"https://openalex.org/S4306400806","display_name":"Europe PMC (PubMed Central)","issn_l":null,"issn":null,"is_oa":false,"is_in_doaj":false,"is_core":false,"host_organization":"https://openalex.org/I1303153112","host_organization_name":"European Bioinformatics Institute","host_organization_lineage":["https://openalex.org/I1303153112"],"host_organization_lineage_names":[],"type":"repository"},"license":"other-oa","license_id":"https://openalex.org/licenses/other-oa","version":"submittedVersion","is_accepted":false,"is_published":false,"raw_source_name":null,"raw_type":"Text"}],"best_oa_location":{"id":"doi:10.1093/bib/bbaf084","is_oa":true,"landing_page_url":"https://doi.org/10.1093/bib/bbaf084","pdf_url":"https://academic.oup.com/bib/article-pdf/26/2/bbaf084/62366947/bbaf084.pdf","source":{"id":"https://openalex.org/S91767247","display_name":"Briefings in Bioinformatics","issn_l":"1467-5463","issn":["1467-5463","1477-4054"],"is_oa":true,"is_in_doaj":true,"is_core":true,"host_organization":"https://openalex.org/P4310311648","host_organization_name":"Oxford University Press","host_organization_lineage":["https://openalex.org/P4310311648","https://openalex.org/P4310311647"],"host_organization_lineage_names":["Oxford University Press","University of Oxford"],"type":"journal"},"license":null,"license_id":null,"version":"publishedVersion","is_accepted":true,"is_published":true,"raw_source_name":"Briefings in Bioinformatics","raw_type":"journal-article"},"sustainable_development_goals":[{"score":0.8600000143051147,"id":"https://metadata.un.org/sdg/3","display_name":"Good health and well-being"}],"awards":[{"id":"https://openalex.org/G1096565463","display_name":null,"funder_award_id":"BIO/FIG/100700","funder_id":"https://openalex.org/F4320322724","funder_display_name":"Ministry of Education, India"},{"id":"https://openalex.org/G182788910","display_name":null,"funder_award_id":"R.11017/36/2023-GIA/HR","funder_id":"https://openalex.org/F4320335358","funder_display_name":"Department of Health Research, India"},{"id":"https://openalex.org/G6261765447","display_name":null,"funder_award_id":"R.11013/51/2021-GIA/HR","funder_id":"https://openalex.org/F4320335358","funder_display_name":"Department of Health Research, India"},{"id":"https://openalex.org/G6750332335","display_name":null,"funder_award_id":"BT/2014\u201315/Plan/P-955","funder_id":"https://openalex.org/F4320322724","funder_display_name":"Ministry of Education, India"}],"funders":[{"id":"https://openalex.org/F4320322724","display_name":"Ministry of Education, India","ror":"https://ror.org/048xjjh50"},{"id":"https://openalex.org/F4320335358","display_name":"Department of Health Research, India","ror":null}],"has_content":{"pdf":true,"grobid_xml":false},"content_urls":{"pdf":"https://content.openalex.org/works/W4408291663.pdf"},"referenced_works_count":176,"referenced_works":["https://openalex.org/W1505285086","https://openalex.org/W1568693476","https://openalex.org/W1594526056","https://openalex.org/W1832083778","https://openalex.org/W1965045549","https://openalex.org/W1966991202","https://openalex.org/W1982265452","https://openalex.org/W1988215875","https://openalex.org/W1988533731","https://openalex.org/W1996615242","https://openalex.org/W2010211703","https://openalex.org/W2021210077","https://openalex.org/W2022484447","https://openalex.org/W2023778702","https://openalex.org/W2033727482","https://openalex.org/W2035322315","https://openalex.org/W2037158686","https://openalex.org/W2052097062","https://openalex.org/W2063159959","https://openalex.org/W2063797600","https://openalex.org/W2067127476","https://openalex.org/W2069760687","https://openalex.org/W2070519435","https://openalex.org/W2074707597","https://openalex.org/W2081651733","https://openalex.org/W2097834518","https://openalex.org/W2097862362","https://openalex.org/W2108982334","https://openalex.org/W2110015402","https://openalex.org/W2110233077","https://openalex.org/W2118539769","https://openalex.org/W2126267084","https://openalex.org/W2131275757","https://openalex.org/W2132606421","https://openalex.org/W2133177319","https://openalex.org/W2139757817","https://openalex.org/W2142303087","https://openalex.org/W2147169455","https://openalex.org/W2147427058","https://openalex.org/W2148830285","https://openalex.org/W2157702265","https://openalex.org/W2158274053","https://openalex.org/W2160893019","https://openalex.org/W2168637722","https://openalex.org/W2169790816","https://openalex.org/W2171685287","https://openalex.org/W2289294330","https://openalex.org/W2291003811","https://openalex.org/W2328346769","https://openalex.org/W2397314975","https://openalex.org/W2489559155","https://openalex.org/W2520606563","https://openalex.org/W2525128349","https://openalex.org/W2528456062","https://openalex.org/W2545536333","https://openalex.org/W2546602325","https://openalex.org/W2554219702","https://openalex.org/W2559258718","https://openalex.org/W2575057819","https://openalex.org/W2605343262","https://openalex.org/W2606737810","https://openalex.org/W2610784236","https://openalex.org/W2732139758","https://openalex.org/W2734399491","https://openalex.org/W2763547223","https://openalex.org/W2769959144","https://openalex.org/W2786692372","https://openalex.org/W2789638519","https://openalex.org/W2793461621","https://openalex.org/W2886502825","https://openalex.org/W2887749901","https://openalex.org/W2897778263","https://openalex.org/W2898959095","https://openalex.org/W2901283619","https://openalex.org/W2917603237","https://openalex.org/W2921408531","https://openalex.org/W2935685975","https://openalex.org/W2949123151","https://openalex.org/W2949556747","https://openalex.org/W2950044547","https://openalex.org/W2951216011","https://openalex.org/W2951679282","https://openalex.org/W2953157285","https://openalex.org/W2970491619","https://openalex.org/W2970712029","https://openalex.org/W2970984916","https://openalex.org/W2973098646","https://openalex.org/W2975742760","https://openalex.org/W2979561860","https://openalex.org/W2987724682","https://openalex.org/W3003110834","https://openalex.org/W3003285614","https://openalex.org/W3017386511","https://openalex.org/W3017559929","https://openalex.org/W3020581768","https://openalex.org/W3027089056","https://openalex.org/W3028083463","https://openalex.org/W3028206028","https://openalex.org/W3033129278","https://openalex.org/W3034330436","https://openalex.org/W3035920796","https://openalex.org/W3036778916","https://openalex.org/W3037496568","https://openalex.org/W3043379468","https://openalex.org/W3046870534","https://openalex.org/W3080124367","https://openalex.org/W3081166727","https://openalex.org/W3084205036","https://openalex.org/W3085088149","https://openalex.org/W3091816512","https://openalex.org/W3097008984","https://openalex.org/W3097407122","https://openalex.org/W3102648521","https://openalex.org/W3110202385","https://openalex.org/W3110204737","https://openalex.org/W3111125496","https://openalex.org/W3113578674","https://openalex.org/W3114961285","https://openalex.org/W3118048495","https://openalex.org/W3121345102","https://openalex.org/W3121391924","https://openalex.org/W3125012412","https://openalex.org/W3127656915","https://openalex.org/W3135833838","https://openalex.org/W3173126360","https://openalex.org/W3173360330","https://openalex.org/W3174714560","https://openalex.org/W3176021207","https://openalex.org/W3180301457","https://openalex.org/W3184568031","https://openalex.org/W3185433118","https://openalex.org/W3186424845","https://openalex.org/W3194231319","https://openalex.org/W3195402878","https://openalex.org/W3196522895","https://openalex.org/W3196848227","https://openalex.org/W3200765011","https://openalex.org/W3201306725","https://openalex.org/W3203213430","https://openalex.org/W3204102762","https://openalex.org/W3206061764","https://openalex.org/W3209678692","https://openalex.org/W3210525534","https://openalex.org/W3212233507","https://openalex.org/W3213803608","https://openalex.org/W3217372366","https://openalex.org/W4200144569","https://openalex.org/W4200620870","https://openalex.org/W4205579604","https://openalex.org/W4205672035","https://openalex.org/W4214617667","https://openalex.org/W4220770541","https://openalex.org/W4220976630","https://openalex.org/W4223916144","https://openalex.org/W4224879214","https://openalex.org/W4246297253","https://openalex.org/W4283754817","https://openalex.org/W4294253063","https://openalex.org/W4304098875","https://openalex.org/W4304109069","https://openalex.org/W4307565334","https://openalex.org/W4308372891","https://openalex.org/W4310665630","https://openalex.org/W4322623665","https://openalex.org/W4327896532","https://openalex.org/W4366598089","https://openalex.org/W4366602379","https://openalex.org/W4385766067","https://openalex.org/W4386212812","https://openalex.org/W4387672257","https://openalex.org/W4388000873","https://openalex.org/W4391837781","https://openalex.org/W4392529729","https://openalex.org/W4404830798","https://openalex.org/W6755523152","https://openalex.org/W6776667309"],"related_works":["https://openalex.org/W2346492446","https://openalex.org/W2599306341","https://openalex.org/W4310704641","https://openalex.org/W2889179923","https://openalex.org/W2904256540","https://openalex.org/W2527816288","https://openalex.org/W2795106704","https://openalex.org/W2749815546","https://openalex.org/W3080470203","https://openalex.org/W3029684245"],"abstract_inverted_index":{"The":[0],"recent":[1,25],"pandemics":[2,21],"of":[3,36,43,56,73,114,126,149],"viral":[4,18,37,115,123],"diseases,":[5],"COVID-19/mpox":[6],"(humans)":[7],"and":[8,41,47,67,100,105,133,181],"lumpy":[9],"skin":[10],"disease":[11],"(cattle),":[12],"have":[13,29],"kept":[14],"us":[15],"glued":[16],"to":[17,156,175,185],"research.":[19,162],"These":[20],"along":[22],"with":[23],"the":[24,31,147,172,192],"human":[26,84],"metapneumovirus":[27],"outbreak":[28],"exposed":[30],"urgency":[32],"for":[33,170,191],"early":[34],"diagnosis":[35],"infections,":[38],"vaccine":[39],"development,":[40,110],"discovery":[42],"novel":[44],"antiviral":[45,108],"drugs":[46],"therapeutics.":[48],"To":[49],"support":[50],"this,":[51],"there":[52],"is":[53,70,166],"an":[54,167],"armamentarium":[55],"virus-specific":[57],"computational":[58],"tools":[59,76],"that":[60],"are":[61],"currently":[62],"available.":[63],"VITALdb":[64,165],"(VIroinformatics":[65],"Tools":[66],"ALgorithms":[68],"database)":[69],"a":[71,178,187],"resource":[72],"~360":[74],"viroinformatics":[75,150],"encompassing":[77],"all":[78],"major":[79],"viruses":[80],"(SARS-CoV-2,":[81],"influenza":[82],"virus,":[83,86,90,92,94,96,98],"immunodeficiency":[85],"papillomavirus,":[87],"herpes":[88],"simplex":[89],"hepatitis":[91],"dengue":[93],"Ebola":[95],"Zika":[97],"etc.)":[99],"several":[101],"diverse":[102],"applications":[103],"[structural":[104],"functional":[106],"annotation,":[107],"peptides":[109],"subspecies":[111],"characterization,":[112],"recognition":[113],"recombination,":[116],"inhibitors":[117],"identification,":[118],"phylogenetic":[119],"analysis,":[120],"virus-host":[121],"prediction,":[122],"metagenomics,":[124],"detection":[125],"mutation(s),":[127],"primer":[128],"designing,":[129],"etc.].":[130],"Resources,":[131],"tools,":[132],"other":[134],"utilities":[135],"mentioned":[136],"in":[137,146],"this":[138],"article":[139],"will":[140,183],"not":[141],"only":[142],"facilitate":[143],"further":[144],"developments":[145],"realm":[148],"but":[151],"also":[152],"provide":[153],"tremendous":[154],"fillip":[155],"translate":[157],"fundamental":[158],"knowledge":[159],"into":[160],"applied":[161],"Most":[163],"importantly,":[164],"inevitable":[168],"tool":[169],"selecting":[171],"best":[173],"tool(s)":[174],"carry":[176],"out":[177],"desired":[179],"task":[180],"hence":[182],"prove":[184],"be":[186],"vital":[188],"database":[189],"(VITALdb)":[190],"scientific":[193],"community.":[194],"Database":[195],"URL:":[196],"https://compbio.iitr.ac.in/vitaldb.":[197]},"counts_by_year":[{"year":2025,"cited_by_count":1}],"updated_date":"2026-04-13T07:58:08.660418","created_date":"2025-10-10T00:00:00"}
