{"id":"https://openalex.org/W4407605160","doi":"https://doi.org/10.1093/bib/bbaf055","title":"Advances of computational methods enhance the development of multi-epitope vaccines","display_name":"Advances of computational methods enhance the development of multi-epitope vaccines","publication_year":2024,"publication_date":"2024-11-22","ids":{"openalex":"https://openalex.org/W4407605160","doi":"https://doi.org/10.1093/bib/bbaf055","pmid":"https://pubmed.ncbi.nlm.nih.gov/39951549"},"language":"en","primary_location":{"id":"doi:10.1093/bib/bbaf055","is_oa":true,"landing_page_url":"https://doi.org/10.1093/bib/bbaf055","pdf_url":null,"source":{"id":"https://openalex.org/S91767247","display_name":"Briefings in Bioinformatics","issn_l":"1467-5463","issn":["1467-5463","1477-4054"],"is_oa":true,"is_in_doaj":true,"is_core":true,"host_organization":"https://openalex.org/P4310311648","host_organization_name":"Oxford University Press","host_organization_lineage":["https://openalex.org/P4310311648","https://openalex.org/P4310311647"],"host_organization_lineage_names":["Oxford University Press","University of Oxford"],"type":"journal"},"license":null,"license_id":null,"version":"publishedVersion","is_accepted":true,"is_published":true,"raw_source_name":"Briefings in Bioinformatics","raw_type":"journal-article"},"type":"review","indexed_in":["crossref","doaj","pubmed"],"open_access":{"is_oa":true,"oa_status":"gold","oa_url":"https://doi.org/10.1093/bib/bbaf055","any_repository_has_fulltext":true},"authorships":[{"author_position":"first","author":{"id":"https://openalex.org/A5048899906","display_name":"Yiwen Wei","orcid":"https://orcid.org/0000-0002-8216-6156"},"institutions":[{"id":"https://openalex.org/I148128674","display_name":"University of Shanghai for Science and Technology","ror":"https://ror.org/00ay9v204","country_code":"CN","type":"education","lineage":["https://openalex.org/I148128674"]}],"countries":["CN"],"is_corresponding":true,"raw_author_name":"Yiwen Wei","raw_affiliation_strings":["School of Health Science and Engineering, University of Shanghai for Science and Technology , No. 334, Jungong Road, Yangpu District, Shanghai 200093 ,"],"raw_orcid":null,"affiliations":[{"raw_affiliation_string":"School of Health Science and Engineering, University of Shanghai for Science and Technology , No. 334, Jungong Road, Yangpu District, Shanghai 200093 ,","institution_ids":["https://openalex.org/I148128674"]}]},{"author_position":"middle","author":{"id":"https://openalex.org/A5029170473","display_name":"Tianyi Qiu","orcid":"https://orcid.org/0000-0003-2619-0298"},"institutions":[{"id":"https://openalex.org/I133868755","display_name":"Shanghai Medical College of Fudan University","ror":"https://ror.org/01zntxs11","country_code":"CN","type":"education","lineage":["https://openalex.org/I133868755","https://openalex.org/I24943067"]},{"id":"https://openalex.org/I4210127074","display_name":"Zhongshan Hospital","ror":"https://ror.org/032x22645","country_code":"CN","type":"healthcare","lineage":["https://openalex.org/I4210127074"]}],"countries":["CN"],"is_corresponding":false,"raw_author_name":"Tianyi Qiu","raw_affiliation_strings":["Institute of Clinical Science, Zhongshan Hospital; Intelligent Medicine Institute; Shanghai Institute of Infectious Disease and Biosecurity, Shanghai Medical College, Fudan University , No. 180, Fenglin Road, Xuhui Destrict, Shanghai 200032 ,"],"raw_orcid":"https://orcid.org/0000-0003-2619-0298","affiliations":[{"raw_affiliation_string":"Institute of Clinical Science, Zhongshan Hospital; Intelligent Medicine Institute; Shanghai Institute of Infectious Disease and Biosecurity, Shanghai Medical College, Fudan University , No. 180, Fenglin Road, Xuhui Destrict, Shanghai 200032 ,","institution_ids":["https://openalex.org/I133868755","https://openalex.org/I4210127074"]}]},{"author_position":"middle","author":{"id":"https://openalex.org/A5041300580","display_name":"Yisi Ai","orcid":null},"institutions":[{"id":"https://openalex.org/I148128674","display_name":"University of Shanghai for Science and Technology","ror":"https://ror.org/00ay9v204","country_code":"CN","type":"education","lineage":["https://openalex.org/I148128674"]}],"countries":["CN"],"is_corresponding":false,"raw_author_name":"Yisi Ai","raw_affiliation_strings":["School of Health Science and Engineering, University of Shanghai for Science and Technology , No. 334, Jungong Road, Yangpu District, Shanghai 200093 ,"],"raw_orcid":null,"affiliations":[{"raw_affiliation_string":"School of Health Science and Engineering, University of Shanghai for Science and Technology , No. 334, Jungong Road, Yangpu District, Shanghai 200093 ,","institution_ids":["https://openalex.org/I148128674"]}]},{"author_position":"middle","author":{"id":"https://openalex.org/A5100779763","display_name":"Yuxi Zhang","orcid":"https://orcid.org/0000-0001-5368-1346"},"institutions":[{"id":"https://openalex.org/I148128674","display_name":"University of Shanghai for Science and Technology","ror":"https://ror.org/00ay9v204","country_code":"CN","type":"education","lineage":["https://openalex.org/I148128674"]}],"countries":["CN"],"is_corresponding":false,"raw_author_name":"Yuxi Zhang","raw_affiliation_strings":["School of Health Science and Engineering, University of Shanghai for Science and Technology , No. 334, Jungong Road, Yangpu District, Shanghai 200093 ,"],"raw_orcid":null,"affiliations":[{"raw_affiliation_string":"School of Health Science and Engineering, University of Shanghai for Science and Technology , No. 334, Jungong Road, Yangpu District, Shanghai 200093 ,","institution_ids":["https://openalex.org/I148128674"]}]},{"author_position":"middle","author":{"id":"https://openalex.org/A5100584468","display_name":"Junting Xie","orcid":null},"institutions":[{"id":"https://openalex.org/I148128674","display_name":"University of Shanghai for Science and Technology","ror":"https://ror.org/00ay9v204","country_code":"CN","type":"education","lineage":["https://openalex.org/I148128674"]}],"countries":["CN"],"is_corresponding":false,"raw_author_name":"Junting Xie","raw_affiliation_strings":["School of Health Science and Engineering, University of Shanghai for Science and Technology , No. 334, Jungong Road, Yangpu District, Shanghai 200093 ,"],"raw_orcid":null,"affiliations":[{"raw_affiliation_string":"School of Health Science and Engineering, University of Shanghai for Science and Technology , No. 334, Jungong Road, Yangpu District, Shanghai 200093 ,","institution_ids":["https://openalex.org/I148128674"]}]},{"author_position":"middle","author":{"id":"https://openalex.org/A5088451140","display_name":"Dong Zhang","orcid":"https://orcid.org/0000-0001-8186-4692"},"institutions":[{"id":"https://openalex.org/I148128674","display_name":"University of Shanghai for Science and Technology","ror":"https://ror.org/00ay9v204","country_code":"CN","type":"education","lineage":["https://openalex.org/I148128674"]}],"countries":["CN"],"is_corresponding":false,"raw_author_name":"Dong Zhang","raw_affiliation_strings":["School of Health Science and Engineering, University of Shanghai for Science and Technology , No. 334, Jungong Road, Yangpu District, Shanghai 200093 ,"],"raw_orcid":null,"affiliations":[{"raw_affiliation_string":"School of Health Science and Engineering, University of Shanghai for Science and Technology , No. 334, Jungong Road, Yangpu District, Shanghai 200093 ,","institution_ids":["https://openalex.org/I148128674"]}]},{"author_position":"middle","author":{"id":"https://openalex.org/A5103060588","display_name":"Xiaochuan Luo","orcid":"https://orcid.org/0000-0001-6886-1649"},"institutions":[{"id":"https://openalex.org/I148128674","display_name":"University of Shanghai for Science and Technology","ror":"https://ror.org/00ay9v204","country_code":"CN","type":"education","lineage":["https://openalex.org/I148128674"]}],"countries":["CN"],"is_corresponding":false,"raw_author_name":"Xiaochuan Luo","raw_affiliation_strings":["School of Health Science and Engineering, University of Shanghai for Science and Technology , No. 334, Jungong Road, Yangpu District, Shanghai 200093 ,"],"raw_orcid":null,"affiliations":[{"raw_affiliation_string":"School of Health Science and Engineering, University of Shanghai for Science and Technology , No. 334, Jungong Road, Yangpu District, Shanghai 200093 ,","institution_ids":["https://openalex.org/I148128674"]}]},{"author_position":"middle","author":{"id":"https://openalex.org/A5061005298","display_name":"Xiulan Sun","orcid":"https://orcid.org/0000-0002-1188-9613"},"institutions":[{"id":"https://openalex.org/I111599522","display_name":"Jiangnan University","ror":"https://ror.org/04mkzax54","country_code":"CN","type":"education","lineage":["https://openalex.org/I111599522"]},{"id":"https://openalex.org/I4210152154","display_name":"State Key Laboratory of Food Science and Technology","ror":"https://ror.org/04zgj7914","country_code":"CN","type":"facility","lineage":["https://openalex.org/I111599522","https://openalex.org/I141649914","https://openalex.org/I4210152154"]}],"countries":["CN"],"is_corresponding":false,"raw_author_name":"Xiulan Sun","raw_affiliation_strings":["State Key Laboratory of Food Science and Technology, School of Food Science and Technology, National Engineering Research Center for Functional Foods, Synergetic Innovation Center of Food Safety and Nutrition, Jiangnan University , Lihu Avenue 1800, Wuxi, Jiangsu 214122 ,"],"raw_orcid":null,"affiliations":[{"raw_affiliation_string":"State Key Laboratory of Food Science and Technology, School of Food Science and Technology, National Engineering Research Center for Functional Foods, Synergetic Innovation Center of Food Safety and Nutrition, Jiangnan University , Lihu Avenue 1800, Wuxi, Jiangsu 214122 ,","institution_ids":["https://openalex.org/I4210152154","https://openalex.org/I111599522"]}]},{"author_position":"middle","author":{"id":"https://openalex.org/A5100327917","display_name":"Xin Wang","orcid":"https://orcid.org/0000-0002-2845-8510"},"institutions":[{"id":"https://openalex.org/I148128674","display_name":"University of Shanghai for Science and Technology","ror":"https://ror.org/00ay9v204","country_code":"CN","type":"education","lineage":["https://openalex.org/I148128674"]}],"countries":["CN"],"is_corresponding":false,"raw_author_name":"Xin Wang","raw_affiliation_strings":["School of Health Science and Engineering, University of Shanghai for Science and Technology , No. 334, Jungong Road, Yangpu District, Shanghai 200093 ,","Shanghai Collaborative Innovation Center of Energy Therapy for Tumors , No. 334, Jungong Road, Yangpu District, Shanghai 200093 ,"],"raw_orcid":null,"affiliations":[{"raw_affiliation_string":"School of Health Science and Engineering, University of Shanghai for Science and Technology , No. 334, Jungong Road, Yangpu District, Shanghai 200093 ,","institution_ids":["https://openalex.org/I148128674"]},{"raw_affiliation_string":"Shanghai Collaborative Innovation Center of Energy Therapy for Tumors , No. 334, Jungong Road, Yangpu District, Shanghai 200093 ,","institution_ids":[]}]},{"author_position":"last","author":{"id":"https://openalex.org/A5061840111","display_name":"Jingxuan Qiu","orcid":"https://orcid.org/0000-0001-8420-4593"},"institutions":[{"id":"https://openalex.org/I148128674","display_name":"University of Shanghai for Science and Technology","ror":"https://ror.org/00ay9v204","country_code":"CN","type":"education","lineage":["https://openalex.org/I148128674"]}],"countries":["CN"],"is_corresponding":false,"raw_author_name":"Jingxuan Qiu","raw_affiliation_strings":["School of Health Science and Engineering, University of Shanghai for Science and Technology , No. 334, Jungong Road, Yangpu District, Shanghai 200093 ,","Shanghai Collaborative Innovation Center of Energy Therapy for Tumors , No. 334, Jungong Road, Yangpu District, Shanghai 200093 ,"],"raw_orcid":"https://orcid.org/0000-0001-8420-4593","affiliations":[{"raw_affiliation_string":"School of Health Science and Engineering, University of Shanghai for Science and Technology , No. 334, Jungong Road, Yangpu District, Shanghai 200093 ,","institution_ids":["https://openalex.org/I148128674"]},{"raw_affiliation_string":"Shanghai Collaborative Innovation Center of Energy Therapy for Tumors , No. 334, Jungong Road, Yangpu District, Shanghai 200093 ,","institution_ids":[]}]}],"institutions":[],"countries_distinct_count":1,"institutions_distinct_count":10,"corresponding_author_ids":["https://openalex.org/A5048899906"],"corresponding_institution_ids":["https://openalex.org/I148128674"],"apc_list":{"value":4011,"currency":"USD","value_usd":4011},"apc_paid":{"value":4011,"currency":"USD","value_usd":4011},"fwci":2.5323,"has_fulltext":false,"cited_by_count":12,"citation_normalized_percentile":{"value":0.90195171,"is_in_top_1_percent":false,"is_in_top_10_percent":true},"cited_by_percentile_year":{"min":98,"max":99},"biblio":{"volume":"26","issue":"1","first_page":null,"last_page":null},"is_retracted":false,"is_paratext":false,"is_xpac":false,"primary_topic":{"id":"https://openalex.org/T12576","display_name":"vaccines and immunoinformatics approaches","score":1.0,"subfield":{"id":"https://openalex.org/subfields/1312","display_name":"Molecular Biology"},"field":{"id":"https://openalex.org/fields/13","display_name":"Biochemistry, Genetics and Molecular Biology"},"domain":{"id":"https://openalex.org/domains/1","display_name":"Life Sciences"}},"topics":[{"id":"https://openalex.org/T12576","display_name":"vaccines and immunoinformatics approaches","score":1.0,"subfield":{"id":"https://openalex.org/subfields/1312","display_name":"Molecular Biology"},"field":{"id":"https://openalex.org/fields/13","display_name":"Biochemistry, Genetics and Molecular Biology"},"domain":{"id":"https://openalex.org/domains/1","display_name":"Life Sciences"}},{"id":"https://openalex.org/T11016","display_name":"Monoclonal and Polyclonal Antibodies Research","score":0.9901999831199646,"subfield":{"id":"https://openalex.org/subfields/2741","display_name":"Radiology, Nuclear Medicine and Imaging"},"field":{"id":"https://openalex.org/fields/27","display_name":"Medicine"},"domain":{"id":"https://openalex.org/domains/4","display_name":"Health Sciences"}},{"id":"https://openalex.org/T10580","display_name":"Immunotherapy and Immune Responses","score":0.9771999716758728,"subfield":{"id":"https://openalex.org/subfields/2403","display_name":"Immunology"},"field":{"id":"https://openalex.org/fields/24","display_name":"Immunology and Microbiology"},"domain":{"id":"https://openalex.org/domains/1","display_name":"Life Sciences"}}],"keywords":[{"id":"https://openalex.org/keywords/epitope","display_name":"Epitope","score":0.814631998538971},{"id":"https://openalex.org/keywords/immunogen","display_name":"Immunogen","score":0.7650669813156128},{"id":"https://openalex.org/keywords/immunogenicity","display_name":"Immunogenicity","score":0.7368990182876587},{"id":"https://openalex.org/keywords/computer-science","display_name":"Computer science","score":0.6761612892150879},{"id":"https://openalex.org/keywords/in-silico","display_name":"In silico","score":0.5604316592216492},{"id":"https://openalex.org/keywords/benchmark","display_name":"Benchmark (surveying)","score":0.5196551084518433},{"id":"https://openalex.org/keywords/computational-biology","display_name":"Computational biology","score":0.5103654265403748},{"id":"https://openalex.org/keywords/vaccine-efficacy","display_name":"Vaccine efficacy","score":0.4336109161376953},{"id":"https://openalex.org/keywords/immune-system","display_name":"Immune system","score":0.29397881031036377},{"id":"https://openalex.org/keywords/virology","display_name":"Virology","score":0.2714223563671112},{"id":"https://openalex.org/keywords/biology","display_name":"Biology","score":0.22502288222312927},{"id":"https://openalex.org/keywords/vaccination","display_name":"Vaccination","score":0.19738039374351501},{"id":"https://openalex.org/keywords/immunology","display_name":"Immunology","score":0.1542980968952179},{"id":"https://openalex.org/keywords/monoclonal-antibody","display_name":"Monoclonal antibody","score":0.15224775671958923},{"id":"https://openalex.org/keywords/antigen","display_name":"Antigen","score":0.1304495930671692},{"id":"https://openalex.org/keywords/antibody","display_name":"Antibody","score":0.07579272985458374}],"concepts":[{"id":"https://openalex.org/C195616568","wikidata":"https://www.wikidata.org/wiki/Q128711","display_name":"Epitope","level":3,"score":0.814631998538971},{"id":"https://openalex.org/C2779909307","wikidata":"https://www.wikidata.org/wiki/Q1660181","display_name":"Immunogen","level":4,"score":0.7650669813156128},{"id":"https://openalex.org/C2780868878","wikidata":"https://www.wikidata.org/wiki/Q1660197","display_name":"Immunogenicity","level":3,"score":0.7368990182876587},{"id":"https://openalex.org/C41008148","wikidata":"https://www.wikidata.org/wiki/Q21198","display_name":"Computer science","level":0,"score":0.6761612892150879},{"id":"https://openalex.org/C2775905019","wikidata":"https://www.wikidata.org/wiki/Q192572","display_name":"In silico","level":3,"score":0.5604316592216492},{"id":"https://openalex.org/C185798385","wikidata":"https://www.wikidata.org/wiki/Q1161707","display_name":"Benchmark (surveying)","level":2,"score":0.5196551084518433},{"id":"https://openalex.org/C70721500","wikidata":"https://www.wikidata.org/wiki/Q177005","display_name":"Computational biology","level":1,"score":0.5103654265403748},{"id":"https://openalex.org/C2780441014","wikidata":"https://www.wikidata.org/wiki/Q7907952","display_name":"Vaccine efficacy","level":3,"score":0.4336109161376953},{"id":"https://openalex.org/C8891405","wikidata":"https://www.wikidata.org/wiki/Q1059","display_name":"Immune system","level":2,"score":0.29397881031036377},{"id":"https://openalex.org/C159047783","wikidata":"https://www.wikidata.org/wiki/Q7215","display_name":"Virology","level":1,"score":0.2714223563671112},{"id":"https://openalex.org/C86803240","wikidata":"https://www.wikidata.org/wiki/Q420","display_name":"Biology","level":0,"score":0.22502288222312927},{"id":"https://openalex.org/C22070199","wikidata":"https://www.wikidata.org/wiki/Q192995","display_name":"Vaccination","level":2,"score":0.19738039374351501},{"id":"https://openalex.org/C203014093","wikidata":"https://www.wikidata.org/wiki/Q101929","display_name":"Immunology","level":1,"score":0.1542980968952179},{"id":"https://openalex.org/C542903549","wikidata":"https://www.wikidata.org/wiki/Q422248","display_name":"Monoclonal antibody","level":3,"score":0.15224775671958923},{"id":"https://openalex.org/C147483822","wikidata":"https://www.wikidata.org/wiki/Q103537","display_name":"Antigen","level":2,"score":0.1304495930671692},{"id":"https://openalex.org/C159654299","wikidata":"https://www.wikidata.org/wiki/Q79460","display_name":"Antibody","level":2,"score":0.07579272985458374},{"id":"https://openalex.org/C205649164","wikidata":"https://www.wikidata.org/wiki/Q1071","display_name":"Geography","level":0,"score":0.0},{"id":"https://openalex.org/C55493867","wikidata":"https://www.wikidata.org/wiki/Q7094","display_name":"Biochemistry","level":1,"score":0.0},{"id":"https://openalex.org/C13280743","wikidata":"https://www.wikidata.org/wiki/Q131089","display_name":"Geodesy","level":1,"score":0.0},{"id":"https://openalex.org/C104317684","wikidata":"https://www.wikidata.org/wiki/Q7187","display_name":"Gene","level":2,"score":0.0}],"mesh":[{"descriptor_ui":"D000087506","descriptor_name":"Vaccine Development","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D000087506","descriptor_name":"Vaccine Development","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D000087506","descriptor_name":"Vaccine Development","qualifier_ui":"Q000379","qualifier_name":"methods","is_major_topic":true},{"descriptor_ui":"D000087506","descriptor_name":"Vaccine Development","qualifier_ui":"Q000379","qualifier_name":"methods","is_major_topic":true},{"descriptor_ui":"D000465","descriptor_name":"Algorithms","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D000465","descriptor_name":"Algorithms","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D000465","descriptor_name":"Algorithms","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D000465","descriptor_name":"Algorithms","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D000939","descriptor_name":"Epitopes","qualifier_ui":"Q000276","qualifier_name":"immunology","is_major_topic":true},{"descriptor_ui":"D000939","descriptor_name":"Epitopes","qualifier_ui":"Q000276","qualifier_name":"immunology","is_major_topic":true},{"descriptor_ui":"D000939","descriptor_name":"Epitopes","qualifier_ui":"Q000276","qualifier_name":"immunology","is_major_topic":true},{"descriptor_ui":"D000939","descriptor_name":"Epitopes","qualifier_ui":"Q000276","qualifier_name":"immunology","is_major_topic":true},{"descriptor_ui":"D000939","descriptor_name":"Epitopes","qualifier_ui":"Q000737","qualifier_name":"chemistry","is_major_topic":true},{"descriptor_ui":"D000939","descriptor_name":"Epitopes","qualifier_ui":"Q000737","qualifier_name":"chemistry","is_major_topic":true},{"descriptor_ui":"D000939","descriptor_name":"Epitopes","qualifier_ui":"Q000737","qualifier_name":"chemistry","is_major_topic":true},{"descriptor_ui":"D000939","descriptor_name":"Epitopes","qualifier_ui":"Q000737","qualifier_name":"chemistry","is_major_topic":true},{"descriptor_ui":"D003198","descriptor_name":"Computer Simulation","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D003198","descriptor_name":"Computer Simulation","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D003198","descriptor_name":"Computer Simulation","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D003198","descriptor_name":"Computer Simulation","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D006801","descriptor_name":"Humans","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D006801","descriptor_name":"Humans","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D006801","descriptor_name":"Humans","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D006801","descriptor_name":"Humans","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D014612","descriptor_name":"Vaccines","qualifier_ui":"Q000276","qualifier_name":"immunology","is_major_topic":true},{"descriptor_ui":"D014612","descriptor_name":"Vaccines","qualifier_ui":"Q000276","qualifier_name":"immunology","is_major_topic":true},{"descriptor_ui":"D014612","descriptor_name":"Vaccines","qualifier_ui":"Q000276","qualifier_name":"immunology","is_major_topic":true},{"descriptor_ui":"D014612","descriptor_name":"Vaccines","qualifier_ui":"Q000276","qualifier_name":"immunology","is_major_topic":true},{"descriptor_ui":"D019295","descriptor_name":"Computational Biology","qualifier_ui":"Q000379","qualifier_name":"methods","is_major_topic":true},{"descriptor_ui":"D019295","descriptor_name":"Computational Biology","qualifier_ui":"Q000379","qualifier_name":"methods","is_major_topic":true},{"descriptor_ui":"D019295","descriptor_name":"Computational Biology","qualifier_ui":"Q000379","qualifier_name":"methods","is_major_topic":true},{"descriptor_ui":"D019295","descriptor_name":"Computational Biology","qualifier_ui":"Q000379","qualifier_name":"methods","is_major_topic":true}],"locations_count":3,"locations":[{"id":"doi:10.1093/bib/bbaf055","is_oa":true,"landing_page_url":"https://doi.org/10.1093/bib/bbaf055","pdf_url":null,"source":{"id":"https://openalex.org/S91767247","display_name":"Briefings in Bioinformatics","issn_l":"1467-5463","issn":["1467-5463","1477-4054"],"is_oa":true,"is_in_doaj":true,"is_core":true,"host_organization":"https://openalex.org/P4310311648","host_organization_name":"Oxford University Press","host_organization_lineage":["https://openalex.org/P4310311648","https://openalex.org/P4310311647"],"host_organization_lineage_names":["Oxford University Press","University of Oxford"],"type":"journal"},"license":null,"license_id":null,"version":"publishedVersion","is_accepted":true,"is_published":true,"raw_source_name":"Briefings in Bioinformatics","raw_type":"journal-article"},{"id":"pmid:39951549","is_oa":false,"landing_page_url":"https://pubmed.ncbi.nlm.nih.gov/39951549","pdf_url":null,"source":{"id":"https://openalex.org/S4306525036","display_name":"PubMed","issn_l":null,"issn":null,"is_oa":false,"is_in_doaj":false,"is_core":false,"host_organization":"https://openalex.org/I1299303238","host_organization_name":"National Institutes of Health","host_organization_lineage":["https://openalex.org/I1299303238"],"host_organization_lineage_names":[],"type":"repository"},"license":null,"license_id":null,"version":"publishedVersion","is_accepted":true,"is_published":true,"raw_source_name":"Briefings in bioinformatics","raw_type":null},{"id":"pmh:oai:pubmedcentral.nih.gov:11827616","is_oa":true,"landing_page_url":"https://www.ncbi.nlm.nih.gov/pmc/articles/11827616","pdf_url":null,"source":{"id":"https://openalex.org/S2764455111","display_name":"PubMed Central","issn_l":null,"issn":null,"is_oa":true,"is_in_doaj":false,"is_core":false,"host_organization":"https://openalex.org/I1299303238","host_organization_name":"National Institutes of Health","host_organization_lineage":["https://openalex.org/I1299303238"],"host_organization_lineage_names":[],"type":"repository"},"license":"other-oa","license_id":"https://openalex.org/licenses/other-oa","version":"submittedVersion","is_accepted":false,"is_published":false,"raw_source_name":"Brief Bioinform","raw_type":"Text"}],"best_oa_location":{"id":"doi:10.1093/bib/bbaf055","is_oa":true,"landing_page_url":"https://doi.org/10.1093/bib/bbaf055","pdf_url":null,"source":{"id":"https://openalex.org/S91767247","display_name":"Briefings in Bioinformatics","issn_l":"1467-5463","issn":["1467-5463","1477-4054"],"is_oa":true,"is_in_doaj":true,"is_core":true,"host_organization":"https://openalex.org/P4310311648","host_organization_name":"Oxford University Press","host_organization_lineage":["https://openalex.org/P4310311648","https://openalex.org/P4310311647"],"host_organization_lineage_names":["Oxford University Press","University of Oxford"],"type":"journal"},"license":null,"license_id":null,"version":"publishedVersion","is_accepted":true,"is_published":true,"raw_source_name":"Briefings in Bioinformatics","raw_type":"journal-article"},"sustainable_development_goals":[],"awards":[{"id":"https://openalex.org/G4712850420","display_name":null,"funder_award_id":"2022YFF1103101","funder_id":"https://openalex.org/F4320335777","funder_display_name":"National Key Research and Development Program of China"},{"id":"https://openalex.org/G906612804","display_name":null,"funder_award_id":"32370697","funder_id":"https://openalex.org/F4320321001","funder_display_name":"National Natural Science Foundation of China"}],"funders":[{"id":"https://openalex.org/F4320321001","display_name":"National Natural Science Foundation of China","ror":"https://ror.org/01h0zpd94"},{"id":"https://openalex.org/F4320335777","display_name":"National Key Research and Development Program of China","ror":null}],"has_content":{"grobid_xml":false,"pdf":false},"content_urls":null,"referenced_works_count":287,"referenced_works":["https://openalex.org/W948755859","https://openalex.org/W1530470635","https://openalex.org/W1535117461","https://openalex.org/W1549641435","https://openalex.org/W1553010155","https://openalex.org/W1586141573","https://openalex.org/W1606917100","https://openalex.org/W1752267321","https://openalex.org/W1768303176","https://openalex.org/W1795576732","https://openalex.org/W1890300865","https://openalex.org/W1979874740","https://openalex.org/W1989162387","https://openalex.org/W1989425151","https://openalex.org/W1989873812","https://openalex.org/W1993751600","https://openalex.org/W1994048581","https://openalex.org/W1999565480","https://openalex.org/W2003805630","https://openalex.org/W2005095482","https://openalex.org/W2008241299","https://openalex.org/W2012625502","https://openalex.org/W2015176909","https://openalex.org/W2020564539","https://openalex.org/W2020996714","https://openalex.org/W2021210077","https://openalex.org/W2023555243","https://openalex.org/W2024266527","https://openalex.org/W2035014358","https://openalex.org/W2035240910","https://openalex.org/W2048741406","https://openalex.org/W2052321000","https://openalex.org/W2052685738","https://openalex.org/W2059178238","https://openalex.org/W2060783338","https://openalex.org/W2062018073","https://openalex.org/W2067127476","https://openalex.org/W2067761505","https://openalex.org/W2069163783","https://openalex.org/W2070639360","https://openalex.org/W2071025739","https://openalex.org/W2075188473","https://openalex.org/W2076639605","https://openalex.org/W2078866994","https://openalex.org/W2081512311","https://openalex.org/W2082206279","https://openalex.org/W2090577544","https://openalex.org/W2097874743","https://openalex.org/W2099500226","https://openalex.org/W2100124066","https://openalex.org/W2100316154","https://openalex.org/W2102023232","https://openalex.org/W2102367710","https://openalex.org/W2102786297","https://openalex.org/W2104111774","https://openalex.org/W2108035024","https://openalex.org/W2108760877","https://openalex.org/W2110298304","https://openalex.org/W2110474492","https://openalex.org/W2110575808","https://openalex.org/W2112874093","https://openalex.org/W2117064132","https://openalex.org/W2117333383","https://openalex.org/W2119761838","https://openalex.org/W2120467372","https://openalex.org/W2121049053","https://openalex.org/W2125014261","https://openalex.org/W2125644345","https://openalex.org/W2125866257","https://openalex.org/W2127635589","https://openalex.org/W2132449251","https://openalex.org/W2132609988","https://openalex.org/W2134378878","https://openalex.org/W2136777954","https://openalex.org/W2140468230","https://openalex.org/W2140628140","https://openalex.org/W2141316307","https://openalex.org/W2142471655","https://openalex.org/W2142739377","https://openalex.org/W2144612215","https://openalex.org/W2149350146","https://openalex.org/W2149984099","https://openalex.org/W2150383532","https://openalex.org/W2151191238","https://openalex.org/W2151932306","https://openalex.org/W2152065574","https://openalex.org/W2155786171","https://openalex.org/W2156039063","https://openalex.org/W2158469489","https://openalex.org/W2158899863","https://openalex.org/W2159767366","https://openalex.org/W2160397907","https://openalex.org/W2160694273","https://openalex.org/W2161577497","https://openalex.org/W2161851240","https://openalex.org/W2161984798","https://openalex.org/W2163174206","https://openalex.org/W2166831581","https://openalex.org/W2168021965","https://openalex.org/W2168036974","https://openalex.org/W2168518560","https://openalex.org/W2170564629","https://openalex.org/W2171732889","https://openalex.org/W2171740232","https://openalex.org/W2177083469","https://openalex.org/W2216203568","https://openalex.org/W2254535559","https://openalex.org/W2271914738","https://openalex.org/W2272555026","https://openalex.org/W2281797260","https://openalex.org/W2323929490","https://openalex.org/W2332069425","https://openalex.org/W2345713210","https://openalex.org/W2394725514","https://openalex.org/W2397610672","https://openalex.org/W2412513047","https://openalex.org/W2524428139","https://openalex.org/W2544105246","https://openalex.org/W2572080171","https://openalex.org/W2584679456","https://openalex.org/W2587515533","https://openalex.org/W2588466226","https://openalex.org/W2611314002","https://openalex.org/W2613978126","https://openalex.org/W2728365508","https://openalex.org/W2748343486","https://openalex.org/W2752126733","https://openalex.org/W2755831618","https://openalex.org/W2766169371","https://openalex.org/W2769449671","https://openalex.org/W2771094908","https://openalex.org/W2776648280","https://openalex.org/W2777980778","https://openalex.org/W2790637862","https://openalex.org/W2791601557","https://openalex.org/W2796370274","https://openalex.org/W2796391117","https://openalex.org/W2798016132","https://openalex.org/W2806925824","https://openalex.org/W2884557428","https://openalex.org/W2894849296","https://openalex.org/W2898079494","https://openalex.org/W2898389621","https://openalex.org/W2904803926","https://openalex.org/W2909455948","https://openalex.org/W2909834406","https://openalex.org/W2911912978","https://openalex.org/W2915583118","https://openalex.org/W2918075940","https://openalex.org/W2921553057","https://openalex.org/W2944150887","https://openalex.org/W2945011426","https://openalex.org/W2955441055","https://openalex.org/W2965921152","https://openalex.org/W2968330413","https://openalex.org/W2971913935","https://openalex.org/W2979293383","https://openalex.org/W2982476296","https://openalex.org/W2984055282","https://openalex.org/W2995389725","https://openalex.org/W2996913199","https://openalex.org/W3005844923","https://openalex.org/W3006708056","https://openalex.org/W3012247520","https://openalex.org/W3016664388","https://openalex.org/W3016853422","https://openalex.org/W3018554363","https://openalex.org/W3024570138","https://openalex.org/W3030201038","https://openalex.org/W3042910002","https://openalex.org/W3044326329","https://openalex.org/W3045549446","https://openalex.org/W3089319029","https://openalex.org/W3090903754","https://openalex.org/W3091851011","https://openalex.org/W3093282046","https://openalex.org/W3094213757","https://openalex.org/W3101256226","https://openalex.org/W3104435397","https://openalex.org/W3106602626","https://openalex.org/W3108988867","https://openalex.org/W3111171798","https://openalex.org/W3113260825","https://openalex.org/W3113525558","https://openalex.org/W3113774549","https://openalex.org/W3127020663","https://openalex.org/W3142566710","https://openalex.org/W3144140615","https://openalex.org/W3145990216","https://openalex.org/W3152577110","https://openalex.org/W3156419307","https://openalex.org/W3159295432","https://openalex.org/W3162421907","https://openalex.org/W3162443883","https://openalex.org/W3164277106","https://openalex.org/W3164812509","https://openalex.org/W3184322957","https://openalex.org/W3190260127","https://openalex.org/W3196488318","https://openalex.org/W3207806256","https://openalex.org/W3209009192","https://openalex.org/W3214323653","https://openalex.org/W3214706838","https://openalex.org/W4200034760","https://openalex.org/W4200276175","https://openalex.org/W4200509919","https://openalex.org/W4206722897","https://openalex.org/W4211143846","https://openalex.org/W4220655797","https://openalex.org/W4220798728","https://openalex.org/W4220847686","https://openalex.org/W4220912136","https://openalex.org/W4221073673","https://openalex.org/W4226068113","https://openalex.org/W4235859326","https://openalex.org/W4281667226","https://openalex.org/W4281945391","https://openalex.org/W4282913866","https://openalex.org/W4283777218","https://openalex.org/W4285147578","https://openalex.org/W4285733668","https://openalex.org/W4292519143","https://openalex.org/W4294916220","https://openalex.org/W4296295845","https://openalex.org/W4297238010","https://openalex.org/W4304889370","https://openalex.org/W4306406766","https://openalex.org/W4306644668","https://openalex.org/W4307266380","https://openalex.org/W4307862924","https://openalex.org/W4308754596","https://openalex.org/W4308773001","https://openalex.org/W4310213235","https://openalex.org/W4311326710","https://openalex.org/W4313398767","https://openalex.org/W4313424701","https://openalex.org/W4313706615","https://openalex.org/W4316591604","https://openalex.org/W4317532687","https://openalex.org/W4318049571","https://openalex.org/W4318480056","https://openalex.org/W4321440624","https://openalex.org/W4321444396","https://openalex.org/W4321498275","https://openalex.org/W4362601885","https://openalex.org/W4362633841","https://openalex.org/W4362735066","https://openalex.org/W4364354112","https://openalex.org/W4365815948","https://openalex.org/W4367681391","https://openalex.org/W4377294732","https://openalex.org/W4377966407","https://openalex.org/W4384819234","https://openalex.org/W4384934897","https://openalex.org/W4385667382","https://openalex.org/W4386419156","https://openalex.org/W4386923520","https://openalex.org/W4387452812","https://openalex.org/W4387540805","https://openalex.org/W4387573349","https://openalex.org/W4387697406","https://openalex.org/W4389047493","https://openalex.org/W4389234252","https://openalex.org/W4389451366","https://openalex.org/W4389479390","https://openalex.org/W4390031324","https://openalex.org/W4391042215","https://openalex.org/W4391648610","https://openalex.org/W4392352249","https://openalex.org/W4393218144","https://openalex.org/W4393276453","https://openalex.org/W4393905722","https://openalex.org/W4394728974","https://openalex.org/W4394850509","https://openalex.org/W4394894115","https://openalex.org/W4394911615","https://openalex.org/W4396707138","https://openalex.org/W4396721167","https://openalex.org/W4396828031","https://openalex.org/W4397042806","https://openalex.org/W4399546337","https://openalex.org/W4400218120","https://openalex.org/W4400864148","https://openalex.org/W4403339106","https://openalex.org/W4403479347","https://openalex.org/W4403917542","https://openalex.org/W6676659345"],"related_works":["https://openalex.org/W2393764744","https://openalex.org/W2008317712","https://openalex.org/W2417982011","https://openalex.org/W2966013535","https://openalex.org/W2019183242","https://openalex.org/W1991572753","https://openalex.org/W2049572644","https://openalex.org/W2051777582","https://openalex.org/W3023027382","https://openalex.org/W1606189536"],"abstract_inverted_index":{"Vaccine":[0],"development":[1,35],"is":[2,19],"one":[3],"of":[4,29,36,41,48,66,82,109],"the":[5,27,39,46,56,102,107],"most":[6],"promising":[7],"fields,":[8],"and":[9,31,38,60,78,89,94],"multi-epitope":[10],"vaccine,":[11],"which":[12],"does":[13],"not":[14],"need":[15],"laborious":[16],"culture":[17],"processes,":[18],"an":[20],"attractive":[21],"alternative":[22],"to":[23],"classical":[24],"vaccines":[25],"with":[26],"advantage":[28],"safety,":[30],"efficiency.":[32],"The":[33,80],"rapid":[34],"algorithms":[37,61],"accumulation":[40],"immune":[42],"data":[43,59],"have":[44],"facilitated":[45],"advancement":[47],"computer-aided":[49],"vaccine":[50,68,75],"design.":[51],"Here":[52],"we":[53,100],"systemically":[54],"reviewed":[55],"in":[57],"silico":[58],"resource,":[62],"for":[63,106],"different":[64,83],"steps":[65],"computational":[67],"design,":[69],"including":[70],"immunogen":[71],"selection,":[72],"epitope":[73,87],"prediction,":[74],"construction,":[76],"optimization,":[77],"evaluation.":[79],"performance":[81],"available":[84],"tools":[85],"on":[86,96],"prediction":[88],"immunogenicity":[90],"evaluation":[91],"was":[92],"tested":[93],"compared":[95],"benchmark":[97],"datasets.":[98],"Finally,":[99],"discuss":[101],"future":[103],"research":[104],"direction":[105],"construction":[108],"a":[110],"multiepitope":[111],"vaccine.":[112]},"counts_by_year":[{"year":2026,"cited_by_count":4},{"year":2025,"cited_by_count":8}],"updated_date":"2026-05-23T08:51:43.019350","created_date":"2025-10-10T00:00:00"}
