{"id":"https://openalex.org/W4403853443","doi":"https://doi.org/10.1093/bib/bbae557","title":"A consensus-based classification workflow to determine genetically inferred ancestry from comprehensive genomic profiling of patients with solid tumors","display_name":"A consensus-based classification workflow to determine genetically inferred ancestry from comprehensive genomic profiling of patients with solid tumors","publication_year":2024,"publication_date":"2024-09-23","ids":{"openalex":"https://openalex.org/W4403853443","doi":"https://doi.org/10.1093/bib/bbae557","pmid":"https://pubmed.ncbi.nlm.nih.gov/39471413"},"language":"en","primary_location":{"id":"doi:10.1093/bib/bbae557","is_oa":true,"landing_page_url":"https://doi.org/10.1093/bib/bbae557","pdf_url":"https://academic.oup.com/bib/article-pdf/25/6/bbae557/60204902/bbae557.pdf","source":{"id":"https://openalex.org/S91767247","display_name":"Briefings in Bioinformatics","issn_l":"1467-5463","issn":["1467-5463","1477-4054"],"is_oa":true,"is_in_doaj":true,"is_core":true,"host_organization":"https://openalex.org/P4310311648","host_organization_name":"Oxford University Press","host_organization_lineage":["https://openalex.org/P4310311648","https://openalex.org/P4310311647"],"host_organization_lineage_names":["Oxford University Press","University of Oxford"],"type":"journal"},"license":"cc-by","license_id":"https://openalex.org/licenses/cc-by","version":"publishedVersion","is_accepted":true,"is_published":true,"raw_source_name":"Briefings in Bioinformatics","raw_type":"journal-article"},"type":"article","indexed_in":["crossref","doaj","pubmed"],"open_access":{"is_oa":true,"oa_status":"gold","oa_url":"https://academic.oup.com/bib/article-pdf/25/6/bbae557/60204902/bbae557.pdf","any_repository_has_fulltext":true},"authorships":[{"author_position":"first","author":{"id":"https://openalex.org/A5037780867","display_name":"Zachary D. Wallen","orcid":"https://orcid.org/0000-0002-2278-7348"},"institutions":[{"id":"https://openalex.org/I2801558778","display_name":"LabCorp (United States)","ror":"https://ror.org/03zsdhz84","country_code":"US","type":"company","lineage":["https://openalex.org/I2801558778"]}],"countries":["US"],"is_corresponding":true,"raw_author_name":"Zachary D Wallen","raw_affiliation_strings":["Medical Oncology, Labcorp Oncology , 6 Moore Dr., Durham, NC 27560 ,"],"raw_orcid":"https://orcid.org/0000-0002-2278-7348","affiliations":[{"raw_affiliation_string":"Medical Oncology, Labcorp Oncology , 6 Moore Dr., Durham, NC 27560 ,","institution_ids":["https://openalex.org/I2801558778"]}]},{"author_position":"middle","author":{"id":"https://openalex.org/A5071349192","display_name":"Mary Nesline","orcid":"https://orcid.org/0000-0003-0523-4597"},"institutions":[{"id":"https://openalex.org/I2801558778","display_name":"LabCorp (United States)","ror":"https://ror.org/03zsdhz84","country_code":"US","type":"company","lineage":["https://openalex.org/I2801558778"]}],"countries":["US"],"is_corresponding":false,"raw_author_name":"Mary K Nesline","raw_affiliation_strings":["Medical Oncology, Labcorp Oncology , 6 Moore Dr., Durham, NC 27560 ,"],"raw_orcid":null,"affiliations":[{"raw_affiliation_string":"Medical Oncology, Labcorp Oncology , 6 Moore Dr., Durham, NC 27560 ,","institution_ids":["https://openalex.org/I2801558778"]}]},{"author_position":"middle","author":{"id":"https://openalex.org/A5067217729","display_name":"Sarabjot Pabla","orcid":"https://orcid.org/0000-0002-7746-9144"},"institutions":[{"id":"https://openalex.org/I2801558778","display_name":"LabCorp (United States)","ror":"https://ror.org/03zsdhz84","country_code":"US","type":"company","lineage":["https://openalex.org/I2801558778"]}],"countries":["US"],"is_corresponding":false,"raw_author_name":"Sarabjot Pabla","raw_affiliation_strings":["Medical Oncology, Labcorp Oncology , 6 Moore Dr., Durham, NC 27560 ,"],"raw_orcid":null,"affiliations":[{"raw_affiliation_string":"Medical Oncology, Labcorp Oncology , 6 Moore Dr., Durham, NC 27560 ,","institution_ids":["https://openalex.org/I2801558778"]}]},{"author_position":"middle","author":{"id":"https://openalex.org/A5101601991","display_name":"Shuang Gao","orcid":"https://orcid.org/0000-0002-6875-9166"},"institutions":[{"id":"https://openalex.org/I2801558778","display_name":"LabCorp (United States)","ror":"https://ror.org/03zsdhz84","country_code":"US","type":"company","lineage":["https://openalex.org/I2801558778"]}],"countries":["US"],"is_corresponding":false,"raw_author_name":"Shuang Gao","raw_affiliation_strings":["Medical Oncology, Labcorp Oncology , 6 Moore Dr., Durham, NC 27560 ,"],"raw_orcid":null,"affiliations":[{"raw_affiliation_string":"Medical Oncology, Labcorp Oncology , 6 Moore Dr., Durham, NC 27560 ,","institution_ids":["https://openalex.org/I2801558778"]}]},{"author_position":"middle","author":{"id":"https://openalex.org/A5094224781","display_name":"Erik Vanroey","orcid":null},"institutions":[{"id":"https://openalex.org/I2801558778","display_name":"LabCorp (United States)","ror":"https://ror.org/03zsdhz84","country_code":"US","type":"company","lineage":["https://openalex.org/I2801558778"]}],"countries":["US"],"is_corresponding":false,"raw_author_name":"Erik Vanroey","raw_affiliation_strings":["Medical Oncology, Labcorp Oncology , 6 Moore Dr., Durham, NC 27560 ,"],"raw_orcid":null,"affiliations":[{"raw_affiliation_string":"Medical Oncology, Labcorp Oncology , 6 Moore Dr., Durham, NC 27560 ,","institution_ids":["https://openalex.org/I2801558778"]}]},{"author_position":"middle","author":{"id":"https://openalex.org/A5111064715","display_name":"Stephanie B Hastings","orcid":null},"institutions":[{"id":"https://openalex.org/I2801558778","display_name":"LabCorp (United States)","ror":"https://ror.org/03zsdhz84","country_code":"US","type":"company","lineage":["https://openalex.org/I2801558778"]}],"countries":["US"],"is_corresponding":false,"raw_author_name":"Stephanie B Hastings","raw_affiliation_strings":["Medical Oncology, Labcorp Oncology , 6 Moore Dr., Durham, NC 27560 ,"],"raw_orcid":null,"affiliations":[{"raw_affiliation_string":"Medical Oncology, Labcorp Oncology , 6 Moore Dr., Durham, NC 27560 ,","institution_ids":["https://openalex.org/I2801558778"]}]},{"author_position":"middle","author":{"id":"https://openalex.org/A5075920014","display_name":"Heidi Ko","orcid":"https://orcid.org/0000-0002-7247-9175"},"institutions":[{"id":"https://openalex.org/I2801558778","display_name":"LabCorp (United States)","ror":"https://ror.org/03zsdhz84","country_code":"US","type":"company","lineage":["https://openalex.org/I2801558778"]}],"countries":["US"],"is_corresponding":false,"raw_author_name":"Heidi Ko","raw_affiliation_strings":["Medical Oncology, Labcorp Oncology , 6 Moore Dr., Durham, NC 27560 ,"],"raw_orcid":null,"affiliations":[{"raw_affiliation_string":"Medical Oncology, Labcorp Oncology , 6 Moore Dr., Durham, NC 27560 ,","institution_ids":["https://openalex.org/I2801558778"]}]},{"author_position":"middle","author":{"id":"https://openalex.org/A5077702152","display_name":"Kyle C. Strickland","orcid":"https://orcid.org/0000-0003-1636-5277"},"institutions":[{"id":"https://openalex.org/I2801558778","display_name":"LabCorp (United States)","ror":"https://ror.org/03zsdhz84","country_code":"US","type":"company","lineage":["https://openalex.org/I2801558778"]},{"id":"https://openalex.org/I4210126298","display_name":"Duke Medical Center","ror":"https://ror.org/03njmea73","country_code":"US","type":"healthcare","lineage":["https://openalex.org/I4210126298","https://openalex.org/I4210144876"]}],"countries":["US"],"is_corresponding":false,"raw_author_name":"Kyle C Strickland","raw_affiliation_strings":["Department of Pathology , Duke University Medical Center, , 40 Duke Medicine Cir, Durham, NC 27710 ,","Duke Cancer Institute , Duke University Medical Center, , 40 Duke Medicine Cir, Durham, NC 27710 ,","Medical Oncology, Labcorp Oncology , 6 Moore Dr., Durham, NC 27560 ,"],"raw_orcid":null,"affiliations":[{"raw_affiliation_string":"Department of Pathology , Duke University Medical Center, , 40 Duke Medicine Cir, Durham, NC 27710 ,","institution_ids":["https://openalex.org/I4210126298"]},{"raw_affiliation_string":"Duke Cancer Institute , Duke University Medical Center, , 40 Duke Medicine Cir, Durham, NC 27710 ,","institution_ids":["https://openalex.org/I4210126298"]},{"raw_affiliation_string":"Medical Oncology, Labcorp Oncology , 6 Moore Dr., Durham, NC 27560 ,","institution_ids":["https://openalex.org/I2801558778"]}]},{"author_position":"middle","author":{"id":"https://openalex.org/A5067892203","display_name":"Rebecca A. Previs","orcid":"https://orcid.org/0000-0001-8087-9120"},"institutions":[{"id":"https://openalex.org/I2801558778","display_name":"LabCorp (United States)","ror":"https://ror.org/03zsdhz84","country_code":"US","type":"company","lineage":["https://openalex.org/I2801558778"]},{"id":"https://openalex.org/I4210126298","display_name":"Duke Medical Center","ror":"https://ror.org/03njmea73","country_code":"US","type":"healthcare","lineage":["https://openalex.org/I4210126298","https://openalex.org/I4210144876"]}],"countries":["US"],"is_corresponding":false,"raw_author_name":"Rebecca A Previs","raw_affiliation_strings":["Department of Obstetrics & Gynecology , Duke University Medical Center, , 40 Duke Medicine Cir, Durham, NC 27710 ,","Duke Cancer Institute , Duke University Medical Center, , 40 Duke Medicine Cir, Durham, NC 27710 ,","Medical Oncology, Labcorp Oncology , 6 Moore Dr., Durham, NC 27560 ,"],"raw_orcid":null,"affiliations":[{"raw_affiliation_string":"Department of Obstetrics & Gynecology , Duke University Medical Center, , 40 Duke Medicine Cir, Durham, NC 27710 ,","institution_ids":["https://openalex.org/I4210126298"]},{"raw_affiliation_string":"Duke Cancer Institute , Duke University Medical Center, , 40 Duke Medicine Cir, Durham, NC 27710 ,","institution_ids":["https://openalex.org/I4210126298"]},{"raw_affiliation_string":"Medical Oncology, Labcorp Oncology , 6 Moore Dr., Durham, NC 27560 ,","institution_ids":["https://openalex.org/I2801558778"]}]},{"author_position":"middle","author":{"id":"https://openalex.org/A5051606936","display_name":"Shengle Zhang","orcid":null},"institutions":[{"id":"https://openalex.org/I2801558778","display_name":"LabCorp (United States)","ror":"https://ror.org/03zsdhz84","country_code":"US","type":"company","lineage":["https://openalex.org/I2801558778"]}],"countries":["US"],"is_corresponding":false,"raw_author_name":"Shengle Zhang","raw_affiliation_strings":["Medical Oncology, Labcorp Oncology , 6 Moore Dr., Durham, NC 27560 ,"],"raw_orcid":null,"affiliations":[{"raw_affiliation_string":"Medical Oncology, Labcorp Oncology , 6 Moore Dr., Durham, NC 27560 ,","institution_ids":["https://openalex.org/I2801558778"]}]},{"author_position":"middle","author":{"id":"https://openalex.org/A5027499943","display_name":"Jeffrey M. Conroy","orcid":"https://orcid.org/0000-0003-1764-9706"},"institutions":[{"id":"https://openalex.org/I2801558778","display_name":"LabCorp (United States)","ror":"https://ror.org/03zsdhz84","country_code":"US","type":"company","lineage":["https://openalex.org/I2801558778"]}],"countries":["US"],"is_corresponding":false,"raw_author_name":"Jeffrey M Conroy","raw_affiliation_strings":["Medical Oncology, Labcorp Oncology , 6 Moore Dr., Durham, NC 27560 ,"],"raw_orcid":null,"affiliations":[{"raw_affiliation_string":"Medical Oncology, Labcorp Oncology , 6 Moore Dr., Durham, NC 27560 ,","institution_ids":["https://openalex.org/I2801558778"]}]},{"author_position":"middle","author":{"id":"https://openalex.org/A5003764522","display_name":"Taylor J. Jensen","orcid":"https://orcid.org/0000-0002-7206-7656"},"institutions":[{"id":"https://openalex.org/I2801558778","display_name":"LabCorp (United States)","ror":"https://ror.org/03zsdhz84","country_code":"US","type":"company","lineage":["https://openalex.org/I2801558778"]}],"countries":["US"],"is_corresponding":false,"raw_author_name":"Taylor J Jensen","raw_affiliation_strings":["Medical Oncology, Labcorp Oncology , 6 Moore Dr., Durham, NC 27560 ,"],"raw_orcid":null,"affiliations":[{"raw_affiliation_string":"Medical Oncology, Labcorp Oncology , 6 Moore Dr., Durham, NC 27560 ,","institution_ids":["https://openalex.org/I2801558778"]}]},{"author_position":"middle","author":{"id":"https://openalex.org/A5006178837","display_name":"Elizabeth George","orcid":"https://orcid.org/0000-0003-3141-5738"},"institutions":[{"id":"https://openalex.org/I2801558778","display_name":"LabCorp (United States)","ror":"https://ror.org/03zsdhz84","country_code":"US","type":"company","lineage":["https://openalex.org/I2801558778"]}],"countries":["US"],"is_corresponding":false,"raw_author_name":"Elizabeth George","raw_affiliation_strings":["Labcorp , 531 South Spring Street, Burlington, NC 27215 ,"],"raw_orcid":null,"affiliations":[{"raw_affiliation_string":"Labcorp , 531 South Spring Street, Burlington, NC 27215 ,","institution_ids":["https://openalex.org/I2801558778"]}]},{"author_position":"middle","author":{"id":"https://openalex.org/A5037864594","display_name":"Marcia Eisenberg","orcid":null},"institutions":[{"id":"https://openalex.org/I2801558778","display_name":"LabCorp (United States)","ror":"https://ror.org/03zsdhz84","country_code":"US","type":"company","lineage":["https://openalex.org/I2801558778"]}],"countries":["US"],"is_corresponding":false,"raw_author_name":"Marcia Eisenberg","raw_affiliation_strings":["Labcorp , 531 South Spring Street, Burlington, NC 27215 ,"],"raw_orcid":null,"affiliations":[{"raw_affiliation_string":"Labcorp , 531 South Spring Street, Burlington, NC 27215 ,","institution_ids":["https://openalex.org/I2801558778"]}]},{"author_position":"middle","author":{"id":"https://openalex.org/A5070601480","display_name":"Brian Caveney","orcid":null},"institutions":[{"id":"https://openalex.org/I2801558778","display_name":"LabCorp (United States)","ror":"https://ror.org/03zsdhz84","country_code":"US","type":"company","lineage":["https://openalex.org/I2801558778"]}],"countries":["US"],"is_corresponding":false,"raw_author_name":"Brian Caveney","raw_affiliation_strings":["Labcorp , 531 South Spring Street, Burlington, NC 27215 ,"],"raw_orcid":null,"affiliations":[{"raw_affiliation_string":"Labcorp , 531 South Spring Street, Burlington, NC 27215 ,","institution_ids":["https://openalex.org/I2801558778"]}]},{"author_position":"middle","author":{"id":"https://openalex.org/A5001027329","display_name":"Pratheesh Sathyan","orcid":null},"institutions":[{"id":"https://openalex.org/I178645029","display_name":"Illumina (United States)","ror":"https://ror.org/05k34t975","country_code":"US","type":"company","lineage":["https://openalex.org/I178645029"]}],"countries":["US"],"is_corresponding":false,"raw_author_name":"Pratheesh Sathyan","raw_affiliation_strings":["Oncology Medical Affairs, Illumina Inc , 5200 Illumina Way, San Diego, CA 92122 ,"],"raw_orcid":null,"affiliations":[{"raw_affiliation_string":"Oncology Medical Affairs, Illumina Inc , 5200 Illumina Way, San Diego, CA 92122 ,","institution_ids":["https://openalex.org/I178645029"]}]},{"author_position":"middle","author":{"id":"https://openalex.org/A5022385078","display_name":"Shakti Ramkissoon","orcid":null},"institutions":[{"id":"https://openalex.org/I2801558778","display_name":"LabCorp (United States)","ror":"https://ror.org/03zsdhz84","country_code":"US","type":"company","lineage":["https://openalex.org/I2801558778"]},{"id":"https://openalex.org/I47251452","display_name":"Wake Forest University","ror":"https://ror.org/0207ad724","country_code":"US","type":"education","lineage":["https://openalex.org/I47251452"]}],"countries":["US"],"is_corresponding":false,"raw_author_name":"Shakti Ramkissoon","raw_affiliation_strings":["Department of Pathology , Wake Forest Comprehensive Cancer Center, , Medical Center Boulevard, Winston-Salem, NC 27109 ,","Medical Oncology, Labcorp Oncology , 6 Moore Dr., Durham, NC 27560 ,","Wake Forest School of Medicine , Wake Forest Comprehensive Cancer Center, , Medical Center Boulevard, Winston-Salem, NC 27109 ,"],"raw_orcid":null,"affiliations":[{"raw_affiliation_string":"Department of Pathology , Wake Forest Comprehensive Cancer Center, , Medical Center Boulevard, Winston-Salem, NC 27109 ,","institution_ids":["https://openalex.org/I47251452"]},{"raw_affiliation_string":"Medical Oncology, Labcorp Oncology , 6 Moore Dr., Durham, NC 27560 ,","institution_ids":["https://openalex.org/I2801558778"]},{"raw_affiliation_string":"Wake Forest School of Medicine , Wake Forest Comprehensive Cancer Center, , Medical Center Boulevard, Winston-Salem, NC 27109 ,","institution_ids":["https://openalex.org/I47251452"]}]},{"author_position":"last","author":{"id":"https://openalex.org/A5026556414","display_name":"Eric A. Severson","orcid":"https://orcid.org/0000-0003-4394-2412"},"institutions":[{"id":"https://openalex.org/I2801558778","display_name":"LabCorp (United States)","ror":"https://ror.org/03zsdhz84","country_code":"US","type":"company","lineage":["https://openalex.org/I2801558778"]}],"countries":["US"],"is_corresponding":false,"raw_author_name":"Eric A Severson","raw_affiliation_strings":["Medical Oncology, Labcorp Oncology , 6 Moore Dr., Durham, NC 27560 ,"],"raw_orcid":null,"affiliations":[{"raw_affiliation_string":"Medical Oncology, Labcorp Oncology , 6 Moore Dr., Durham, NC 27560 ,","institution_ids":["https://openalex.org/I2801558778"]}]}],"institutions":[],"countries_distinct_count":1,"institutions_distinct_count":4,"corresponding_author_ids":["https://openalex.org/A5037780867"],"corresponding_institution_ids":["https://openalex.org/I2801558778"],"apc_list":{"value":3922,"currency":"USD","value_usd":3922},"apc_paid":{"value":3922,"currency":"USD","value_usd":3922},"fwci":0.0,"has_fulltext":true,"cited_by_count":0,"citation_normalized_percentile":{"value":0.15247361,"is_in_top_1_percent":false,"is_in_top_10_percent":false},"cited_by_percentile_year":null,"biblio":{"volume":"25","issue":"6","first_page":null,"last_page":null},"is_retracted":false,"is_paratext":false,"is_xpac":false,"primary_topic":{"id":"https://openalex.org/T11287","display_name":"Cancer Genomics and Diagnostics","score":0.9995999932289124,"subfield":{"id":"https://openalex.org/subfields/1306","display_name":"Cancer Research"},"field":{"id":"https://openalex.org/fields/13","display_name":"Biochemistry, Genetics and Molecular Biology"},"domain":{"id":"https://openalex.org/domains/1","display_name":"Life Sciences"}},"topics":[{"id":"https://openalex.org/T11287","display_name":"Cancer Genomics and Diagnostics","score":0.9995999932289124,"subfield":{"id":"https://openalex.org/subfields/1306","display_name":"Cancer Research"},"field":{"id":"https://openalex.org/fields/13","display_name":"Biochemistry, Genetics and Molecular Biology"},"domain":{"id":"https://openalex.org/domains/1","display_name":"Life Sciences"}},{"id":"https://openalex.org/T10261","display_name":"Genetic Associations and Epidemiology","score":0.9962000250816345,"subfield":{"id":"https://openalex.org/subfields/1311","display_name":"Genetics"},"field":{"id":"https://openalex.org/fields/13","display_name":"Biochemistry, Genetics and Molecular Biology"},"domain":{"id":"https://openalex.org/domains/1","display_name":"Life Sciences"}},{"id":"https://openalex.org/T11369","display_name":"Genetic factors in colorectal cancer","score":0.9955999851226807,"subfield":{"id":"https://openalex.org/subfields/2734","display_name":"Pathology and Forensic Medicine"},"field":{"id":"https://openalex.org/fields/27","display_name":"Medicine"},"domain":{"id":"https://openalex.org/domains/4","display_name":"Health Sciences"}}],"keywords":[{"id":"https://openalex.org/keywords/workflow","display_name":"Workflow","score":0.6279293298721313},{"id":"https://openalex.org/keywords/ancestry-informative-marker","display_name":"Ancestry-informative marker","score":0.603792667388916},{"id":"https://openalex.org/keywords/sire","display_name":"Sire","score":0.5978223085403442},{"id":"https://openalex.org/keywords/genetic-genealogy","display_name":"Genetic genealogy","score":0.5781462788581848},{"id":"https://openalex.org/keywords/concordance","display_name":"Concordance","score":0.5766329765319824},{"id":"https://openalex.org/keywords/single-nucleotide-polymorphism","display_name":"Single-nucleotide polymorphism","score":0.5480570197105408},{"id":"https://openalex.org/keywords/inference","display_name":"Inference","score":0.5142437815666199},{"id":"https://openalex.org/keywords/biology","display_name":"Biology","score":0.4782354235649109},{"id":"https://openalex.org/keywords/genetics","display_name":"Genetics","score":0.45098739862442017},{"id":"https://openalex.org/keywords/computational-biology","display_name":"Computational biology","score":0.44852298498153687},{"id":"https://openalex.org/keywords/population-stratification","display_name":"Population stratification","score":0.4353172481060028},{"id":"https://openalex.org/keywords/genotype","display_name":"Genotype","score":0.30866748094558716},{"id":"https://openalex.org/keywords/medicine","display_name":"Medicine","score":0.25696438550949097},{"id":"https://openalex.org/keywords/computer-science","display_name":"Computer science","score":0.24665328860282898},{"id":"https://openalex.org/keywords/gene","display_name":"Gene","score":0.20713797211647034},{"id":"https://openalex.org/keywords/population","display_name":"Population","score":0.17353862524032593},{"id":"https://openalex.org/keywords/artificial-intelligence","display_name":"Artificial intelligence","score":0.16248109936714172},{"id":"https://openalex.org/keywords/database","display_name":"Database","score":0.11159715056419373}],"concepts":[{"id":"https://openalex.org/C177212765","wikidata":"https://www.wikidata.org/wiki/Q627335","display_name":"Workflow","level":2,"score":0.6279293298721313},{"id":"https://openalex.org/C137132547","wikidata":"https://www.wikidata.org/wiki/Q4752570","display_name":"Ancestry-informative marker","level":5,"score":0.603792667388916},{"id":"https://openalex.org/C2780284631","wikidata":"https://www.wikidata.org/wiki/Q1849655","display_name":"Sire","level":2,"score":0.5978223085403442},{"id":"https://openalex.org/C75069973","wikidata":"https://www.wikidata.org/wiki/Q913584","display_name":"Genetic genealogy","level":3,"score":0.5781462788581848},{"id":"https://openalex.org/C160798450","wikidata":"https://www.wikidata.org/wiki/Q4230870","display_name":"Concordance","level":2,"score":0.5766329765319824},{"id":"https://openalex.org/C153209595","wikidata":"https://www.wikidata.org/wiki/Q501128","display_name":"Single-nucleotide polymorphism","level":4,"score":0.5480570197105408},{"id":"https://openalex.org/C2776214188","wikidata":"https://www.wikidata.org/wiki/Q408386","display_name":"Inference","level":2,"score":0.5142437815666199},{"id":"https://openalex.org/C86803240","wikidata":"https://www.wikidata.org/wiki/Q420","display_name":"Biology","level":0,"score":0.4782354235649109},{"id":"https://openalex.org/C54355233","wikidata":"https://www.wikidata.org/wiki/Q7162","display_name":"Genetics","level":1,"score":0.45098739862442017},{"id":"https://openalex.org/C70721500","wikidata":"https://www.wikidata.org/wiki/Q177005","display_name":"Computational biology","level":1,"score":0.44852298498153687},{"id":"https://openalex.org/C166976648","wikidata":"https://www.wikidata.org/wiki/Q7229824","display_name":"Population stratification","level":5,"score":0.4353172481060028},{"id":"https://openalex.org/C135763542","wikidata":"https://www.wikidata.org/wiki/Q106016","display_name":"Genotype","level":3,"score":0.30866748094558716},{"id":"https://openalex.org/C71924100","wikidata":"https://www.wikidata.org/wiki/Q11190","display_name":"Medicine","level":0,"score":0.25696438550949097},{"id":"https://openalex.org/C41008148","wikidata":"https://www.wikidata.org/wiki/Q21198","display_name":"Computer science","level":0,"score":0.24665328860282898},{"id":"https://openalex.org/C104317684","wikidata":"https://www.wikidata.org/wiki/Q7187","display_name":"Gene","level":2,"score":0.20713797211647034},{"id":"https://openalex.org/C2908647359","wikidata":"https://www.wikidata.org/wiki/Q2625603","display_name":"Population","level":2,"score":0.17353862524032593},{"id":"https://openalex.org/C154945302","wikidata":"https://www.wikidata.org/wiki/Q11660","display_name":"Artificial intelligence","level":1,"score":0.16248109936714172},{"id":"https://openalex.org/C77088390","wikidata":"https://www.wikidata.org/wiki/Q8513","display_name":"Database","level":1,"score":0.11159715056419373},{"id":"https://openalex.org/C99454951","wikidata":"https://www.wikidata.org/wiki/Q932068","display_name":"Environmental health","level":1,"score":0.0},{"id":"https://openalex.org/C140793950","wikidata":"https://www.wikidata.org/wiki/Q168091","display_name":"Animal science","level":1,"score":0.0}],"mesh":[{"descriptor_ui":"D006801","descriptor_name":"Humans","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D006801","descriptor_name":"Humans","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D006801","descriptor_name":"Humans","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D006801","descriptor_name":"Humans","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D006801","descriptor_name":"Humans","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D009369","descriptor_name":"Neoplasms","qualifier_ui":"Q000235","qualifier_name":"genetics","is_major_topic":true},{"descriptor_ui":"D009369","descriptor_name":"Neoplasms","qualifier_ui":"Q000235","qualifier_name":"genetics","is_major_topic":true},{"descriptor_ui":"D009369","descriptor_name":"Neoplasms","qualifier_ui":"Q000235","qualifier_name":"genetics","is_major_topic":true},{"descriptor_ui":"D009369","descriptor_name":"Neoplasms","qualifier_ui":"Q000235","qualifier_name":"genetics","is_major_topic":true},{"descriptor_ui":"D009369","descriptor_name":"Neoplasms","qualifier_ui":"Q000235","qualifier_name":"genetics","is_major_topic":true},{"descriptor_ui":"D017410","descriptor_name":"Practice Guidelines as Topic","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D020641","descriptor_name":"Polymorphism, Single Nucleotide","qualifier_ui":null,"qualifier_name":null,"is_major_topic":true},{"descriptor_ui":"D020641","descriptor_name":"Polymorphism, Single Nucleotide","qualifier_ui":null,"qualifier_name":null,"is_major_topic":true},{"descriptor_ui":"D020641","descriptor_name":"Polymorphism, Single Nucleotide","qualifier_ui":null,"qualifier_name":null,"is_major_topic":true},{"descriptor_ui":"D020641","descriptor_name":"Polymorphism, Single Nucleotide","qualifier_ui":null,"qualifier_name":null,"is_major_topic":true},{"descriptor_ui":"D020641","descriptor_name":"Polymorphism, Single Nucleotide","qualifier_ui":null,"qualifier_name":null,"is_major_topic":true},{"descriptor_ui":"D023281","descriptor_name":"Genomics","qualifier_ui":"Q000379","qualifier_name":"methods","is_major_topic":true},{"descriptor_ui":"D023281","descriptor_name":"Genomics","qualifier_ui":"Q000379","qualifier_name":"methods","is_major_topic":true},{"descriptor_ui":"D023281","descriptor_name":"Genomics","qualifier_ui":"Q000379","qualifier_name":"methods","is_major_topic":true},{"descriptor_ui":"D023281","descriptor_name":"Genomics","qualifier_ui":"Q000379","qualifier_name":"methods","is_major_topic":true},{"descriptor_ui":"D023281","descriptor_name":"Genomics","qualifier_ui":"Q000379","qualifier_name":"methods","is_major_topic":true},{"descriptor_ui":"D032921","descriptor_name":"Consensus","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D032921","descriptor_name":"Consensus","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D032921","descriptor_name":"Consensus","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D032921","descriptor_name":"Consensus","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D032921","descriptor_name":"Consensus","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D057188","descriptor_name":"Workflow","qualifier_ui":null,"qualifier_name":null,"is_major_topic":true},{"descriptor_ui":"D057188","descriptor_name":"Workflow","qualifier_ui":null,"qualifier_name":null,"is_major_topic":true},{"descriptor_ui":"D057188","descriptor_name":"Workflow","qualifier_ui":null,"qualifier_name":null,"is_major_topic":true},{"descriptor_ui":"D057188","descriptor_name":"Workflow","qualifier_ui":null,"qualifier_name":null,"is_major_topic":true},{"descriptor_ui":"D057188","descriptor_name":"Workflow","qualifier_ui":null,"qualifier_name":null,"is_major_topic":true}],"locations_count":3,"locations":[{"id":"doi:10.1093/bib/bbae557","is_oa":true,"landing_page_url":"https://doi.org/10.1093/bib/bbae557","pdf_url":"https://academic.oup.com/bib/article-pdf/25/6/bbae557/60204902/bbae557.pdf","source":{"id":"https://openalex.org/S91767247","display_name":"Briefings in Bioinformatics","issn_l":"1467-5463","issn":["1467-5463","1477-4054"],"is_oa":true,"is_in_doaj":true,"is_core":true,"host_organization":"https://openalex.org/P4310311648","host_organization_name":"Oxford University Press","host_organization_lineage":["https://openalex.org/P4310311648","https://openalex.org/P4310311647"],"host_organization_lineage_names":["Oxford University Press","University of Oxford"],"type":"journal"},"license":"cc-by","license_id":"https://openalex.org/licenses/cc-by","version":"publishedVersion","is_accepted":true,"is_published":true,"raw_source_name":"Briefings in Bioinformatics","raw_type":"journal-article"},{"id":"pmid:39471413","is_oa":false,"landing_page_url":"https://pubmed.ncbi.nlm.nih.gov/39471413","pdf_url":null,"source":{"id":"https://openalex.org/S4306525036","display_name":"PubMed","issn_l":null,"issn":null,"is_oa":false,"is_in_doaj":false,"is_core":false,"host_organization":"https://openalex.org/I1299303238","host_organization_name":"National Institutes of Health","host_organization_lineage":["https://openalex.org/I1299303238"],"host_organization_lineage_names":[],"type":"repository"},"license":null,"license_id":null,"version":"publishedVersion","is_accepted":true,"is_published":true,"raw_source_name":"Briefings in bioinformatics","raw_type":"Journal Article"},{"id":"pmh:oai:pubmedcentral.nih.gov:11521331","is_oa":true,"landing_page_url":"https://www.ncbi.nlm.nih.gov/pmc/articles/11521331","pdf_url":"https://pmc.ncbi.nlm.nih.gov/articles/PMC11521331/pdf/bbae557.pdf","source":{"id":"https://openalex.org/S2764455111","display_name":"PubMed Central","issn_l":null,"issn":null,"is_oa":true,"is_in_doaj":false,"is_core":false,"host_organization":"https://openalex.org/I1299303238","host_organization_name":"National Institutes of Health","host_organization_lineage":["https://openalex.org/I1299303238"],"host_organization_lineage_names":[],"type":"repository"},"license":"cc-by","license_id":"https://openalex.org/licenses/cc-by","version":"submittedVersion","is_accepted":false,"is_published":false,"raw_source_name":"Brief Bioinform","raw_type":"Text"}],"best_oa_location":{"id":"doi:10.1093/bib/bbae557","is_oa":true,"landing_page_url":"https://doi.org/10.1093/bib/bbae557","pdf_url":"https://academic.oup.com/bib/article-pdf/25/6/bbae557/60204902/bbae557.pdf","source":{"id":"https://openalex.org/S91767247","display_name":"Briefings in Bioinformatics","issn_l":"1467-5463","issn":["1467-5463","1477-4054"],"is_oa":true,"is_in_doaj":true,"is_core":true,"host_organization":"https://openalex.org/P4310311648","host_organization_name":"Oxford University Press","host_organization_lineage":["https://openalex.org/P4310311648","https://openalex.org/P4310311647"],"host_organization_lineage_names":["Oxford University Press","University of Oxford"],"type":"journal"},"license":"cc-by","license_id":"https://openalex.org/licenses/cc-by","version":"publishedVersion","is_accepted":true,"is_published":true,"raw_source_name":"Briefings in Bioinformatics","raw_type":"journal-article"},"sustainable_development_goals":[{"id":"https://metadata.un.org/sdg/10","display_name":"Reduced inequalities","score":0.7400000095367432}],"awards":[],"funders":[],"has_content":{"pdf":true,"grobid_xml":true},"content_urls":{"pdf":"https://content.openalex.org/works/W4403853443.pdf","grobid_xml":"https://content.openalex.org/works/W4403853443.grobid-xml"},"referenced_works_count":55,"referenced_works":["https://openalex.org/W1831050183","https://openalex.org/W2076007362","https://openalex.org/W2099085143","https://openalex.org/W2102213696","https://openalex.org/W2113129492","https://openalex.org/W2119180969","https://openalex.org/W2119444539","https://openalex.org/W2169719205","https://openalex.org/W2474836229","https://openalex.org/W2522993044","https://openalex.org/W2766569862","https://openalex.org/W2891533221","https://openalex.org/W2897031614","https://openalex.org/W2899751111","https://openalex.org/W2922534626","https://openalex.org/W2948468078","https://openalex.org/W2948690971","https://openalex.org/W2951401399","https://openalex.org/W2976619231","https://openalex.org/W3011413344","https://openalex.org/W3022369650","https://openalex.org/W3084362113","https://openalex.org/W3131055609","https://openalex.org/W3133119333","https://openalex.org/W3152915323","https://openalex.org/W3164366165","https://openalex.org/W3184058448","https://openalex.org/W3192526819","https://openalex.org/W3193326928","https://openalex.org/W3207297220","https://openalex.org/W3210782497","https://openalex.org/W3212043884","https://openalex.org/W3213685313","https://openalex.org/W3217510643","https://openalex.org/W4205365332","https://openalex.org/W4212882240","https://openalex.org/W4223970090","https://openalex.org/W4225307201","https://openalex.org/W4244867288","https://openalex.org/W4288038650","https://openalex.org/W4294001424","https://openalex.org/W4294012180","https://openalex.org/W4298008695","https://openalex.org/W4308624781","https://openalex.org/W4310573104","https://openalex.org/W4315754639","https://openalex.org/W4360939121","https://openalex.org/W4376958942","https://openalex.org/W4377965869","https://openalex.org/W4378211361","https://openalex.org/W4382810382","https://openalex.org/W4384924132","https://openalex.org/W4387845458","https://openalex.org/W4387965115","https://openalex.org/W4390656825"],"related_works":["https://openalex.org/W2532802395","https://openalex.org/W4320495329","https://openalex.org/W2101633780","https://openalex.org/W2099248143","https://openalex.org/W2152011247","https://openalex.org/W1995515413","https://openalex.org/W2143211805","https://openalex.org/W2054618048","https://openalex.org/W2031828491","https://openalex.org/W1987920356"],"abstract_inverted_index":{"Disparities":[0],"in":[1,73,201,226],"cancer":[2],"diagnosis,":[3],"treatment,":[4],"and":[5,11,62,91,100,104,159,195,205,229,242],"outcomes":[6],"based":[7],"on":[8,173],"self-identified":[9],"race":[10],"ethnicity":[12],"(SIRE)":[13],"are":[14],"well":[15,161],"documented,":[16],"yet":[17],"these":[18],"variables":[19],"have":[20,192],"historically":[21],"been":[22],"excluded":[23],"from":[24,39,69,86,94,115,128],"clinical":[25,227],"research.":[26],"Without":[27],"SIRE,":[28],"genetic":[29,67],"ancestry":[30,68,78,113,179],"can":[31],"be":[32],"inferred":[33,112,166],"using":[34,42],"single-nucleotide":[35],"polymorphisms":[36],"(SNPs)":[37],"detected":[38],"tumor":[40,53],"DNA":[41,54],"comprehensive":[43],"genomic":[44,84],"profiling":[45],"(CGP).":[46],"However,":[47],"factors":[48],"inherent":[49],"to":[50,102,108,123,215],"CGP":[51,70,92,116],"of":[52,58,76,165,180,199,223,234],"increase":[55,230],"the":[56,77,178,221,231],"difficulty":[57],"identifying":[59],"ancestry-informative":[60],"SNPs,":[61],"current":[63],"workflows":[64],"for":[65,238],"inferring":[66],"need":[71],"improvements":[72],"key":[74],"areas":[75],"inference":[79],"process.":[80],"This":[81],"study":[82],"used":[83],"data":[85,93],"4274":[87],"diverse":[88,232],"reference":[89,131,163],"subjects":[90],"491":[95],"patients":[96,181,191,200],"with":[97,156,162],"solid":[98],"tumors":[99],"SIRE":[101,157,174],"develop":[103],"validate":[105],"a":[106],"workflow":[107,170],"obtain":[109],"accurate":[110],"genetically":[111],"(GIA)":[114],"sequencing":[117],"results.":[118],"We":[119],"use":[120],"consensus-based":[121],"classification":[122],"derive":[124],"confident":[125],"ancestral":[126],"inferences":[127],"an":[129],"expanded":[130],"dataset":[132],"covering":[133],"eight":[134],"world":[135],"populations":[136,164,236],"(African,":[137],"Admixed":[138],"American,":[139],"Central":[140],"Asian/Siberian,":[141],"European,":[142],"East":[143],"Asian,":[144],"Middle":[145],"Eastern,":[146],"Oceania,":[147],"South":[148],"Asian).":[149],"Our":[150],"GIA":[151,211],"calls":[152],"were":[153],"highly":[154],"concordant":[155],"(95%)":[158],"aligned":[160],"ancestries.":[167],"Further,":[168],"our":[169],"could":[171],"expand":[172],"by":[175],"(i)":[176],"detecting":[177],"that":[182],"usually":[183],"lack":[184],"appropriate":[185],"racial":[186,203],"categories,":[187],"(ii)":[188],"determining":[189],"what":[190],"mixed":[193],"ancestry,":[194],"(iii)":[196],"resolving":[197],"ancestries":[198],"heterogeneous":[202],"categories":[204],"who":[206],"had":[207],"missing":[208],"SIRE.":[209],"Accurate":[210],"provides":[212],"needed":[213],"information":[214],"enable":[216],"ancestry-aware":[217],"biomarker":[218],"research,":[219,228],"ensure":[220],"inclusion":[222],"underrepresented":[224],"groups":[225],"representation":[233],"patient":[235],"eligible":[237],"precision":[239],"medicine":[240],"therapies":[241],"trials.":[243]},"counts_by_year":[],"updated_date":"2026-08-28T12:50:07.497085","created_date":"2025-10-10T00:00:00"}
