{"id":"https://openalex.org/W4404112271","doi":"https://doi.org/10.1093/bib/bbae527","title":"Phylogeny-aware linear B-cell epitope predictor detects targets associated with immune response to orthopoxviruses","display_name":"Phylogeny-aware linear B-cell epitope predictor detects targets associated with immune response to orthopoxviruses","publication_year":2024,"publication_date":"2024-09-23","ids":{"openalex":"https://openalex.org/W4404112271","doi":"https://doi.org/10.1093/bib/bbae527","pmid":"https://pubmed.ncbi.nlm.nih.gov/39503522"},"language":"en","primary_location":{"id":"doi:10.1093/bib/bbae527","is_oa":true,"landing_page_url":"https://doi.org/10.1093/bib/bbae527","pdf_url":"https://academic.oup.com/bib/article-pdf/25/6/bbae527/60441405/bbae527.pdf","source":{"id":"https://openalex.org/S91767247","display_name":"Briefings in Bioinformatics","issn_l":"1467-5463","issn":["1467-5463","1477-4054"],"is_oa":true,"is_in_doaj":true,"is_core":true,"host_organization":"https://openalex.org/P4310311648","host_organization_name":"Oxford University Press","host_organization_lineage":["https://openalex.org/P4310311648","https://openalex.org/P4310311647"],"host_organization_lineage_names":["Oxford University Press","University of Oxford"],"type":"journal"},"license":"cc-by","license_id":"https://openalex.org/licenses/cc-by","version":"publishedVersion","is_accepted":true,"is_published":true,"raw_source_name":"Briefings in Bioinformatics","raw_type":"journal-article"},"type":"article","indexed_in":["crossref","doaj","pubmed"],"open_access":{"is_oa":true,"oa_status":"gold","oa_url":"https://academic.oup.com/bib/article-pdf/25/6/bbae527/60441405/bbae527.pdf","any_repository_has_fulltext":true},"authorships":[{"author_position":"first","author":{"id":"https://openalex.org/A5000238517","display_name":"Felipe Campelo","orcid":"https://orcid.org/0000-0001-8432-4325"},"institutions":[{"id":"https://openalex.org/I36234482","display_name":"University of Bristol","ror":"https://ror.org/0524sp257","country_code":"GB","type":"education","lineage":["https://openalex.org/I36234482"]}],"countries":["GB"],"is_corresponding":false,"raw_author_name":"Felipe Campelo","raw_affiliation_strings":["School of Engineering Mathematics and Technology, University of Bristol , Ada Lovelace Building, Tankard's Close BS8 1TW, Bristol ,"],"raw_orcid":"https://orcid.org/0000-0001-8432-4325","affiliations":[{"raw_affiliation_string":"School of Engineering Mathematics and Technology, University of Bristol , Ada Lovelace Building, Tankard's Close BS8 1TW, Bristol ,","institution_ids":["https://openalex.org/I36234482"]}]},{"author_position":"middle","author":{"id":"https://openalex.org/A5015542830","display_name":"Ana Laura Grossi de Oliveira","orcid":"https://orcid.org/0000-0003-4614-7502"},"institutions":[{"id":"https://openalex.org/I110200422","display_name":"Universidade Federal de Minas Gerais","ror":"https://ror.org/0176yjw32","country_code":"BR","type":"education","lineage":["https://openalex.org/I110200422"]}],"countries":["BR"],"is_corresponding":false,"raw_author_name":"Ana Laura Grossi de Oliveira","raw_affiliation_strings":["Federal University of Minas Gerais , School of Medicine, , Av. Prof. Alfredo Balena 190, 30130-100, Belo Horizonte ,","Post-Graduate Program in Infectious Diseases and Tropical Medicine , School of Medicine, , Av. Prof. Alfredo Balena 190, 30130-100, Belo Horizonte ,"],"raw_orcid":null,"affiliations":[{"raw_affiliation_string":"Federal University of Minas Gerais , School of Medicine, , Av. Prof. Alfredo Balena 190, 30130-100, Belo Horizonte ,","institution_ids":["https://openalex.org/I110200422"]},{"raw_affiliation_string":"Post-Graduate Program in Infectious Diseases and Tropical Medicine , School of Medicine, , Av. Prof. Alfredo Balena 190, 30130-100, Belo Horizonte ,","institution_ids":[]}]},{"author_position":"middle","author":{"id":"https://openalex.org/A5075293547","display_name":"Jo\u00e3o Lu\u00eds Reis-Cunha","orcid":"https://orcid.org/0000-0003-1034-0992"},"institutions":[{"id":"https://openalex.org/I4210137803","display_name":"Biomedical Research Institute","ror":"https://ror.org/03yr0pg70","country_code":"US","type":"nonprofit","lineage":["https://openalex.org/I4210137803"]},{"id":"https://openalex.org/I52099693","display_name":"University of York","ror":"https://ror.org/04m01e293","country_code":"GB","type":"education","lineage":["https://openalex.org/I52099693"]}],"countries":["GB","US"],"is_corresponding":false,"raw_author_name":"Jo\u00e3o Reis-Cunha","raw_affiliation_strings":["University of York , Department of Biology, , Wentworth Way YO10 5NG, York ,","York Biomedical Research Institute , Department of Biology, , Wentworth Way YO10 5NG, York ,"],"raw_orcid":null,"affiliations":[{"raw_affiliation_string":"University of York , Department of Biology, , Wentworth Way YO10 5NG, York ,","institution_ids":["https://openalex.org/I52099693"]},{"raw_affiliation_string":"York Biomedical Research Institute , Department of Biology, , Wentworth Way YO10 5NG, York ,","institution_ids":["https://openalex.org/I4210137803"]}]},{"author_position":"middle","author":{"id":"https://openalex.org/A5078151303","display_name":"Van\u00eassa Gomes Fraga","orcid":null},"institutions":[{"id":"https://openalex.org/I110200422","display_name":"Universidade Federal de Minas Gerais","ror":"https://ror.org/0176yjw32","country_code":"BR","type":"education","lineage":["https://openalex.org/I110200422"]},{"id":"https://openalex.org/I4210096427","display_name":"Institut des Sciences Biologiques","ror":"https://ror.org/00rydyx93","country_code":"FR","type":"facility","lineage":["https://openalex.org/I1294671590","https://openalex.org/I4210096427"]}],"countries":["BR","FR"],"is_corresponding":false,"raw_author_name":"Vanessa Gomes Fraga","raw_affiliation_strings":["Department of Parasitology , Institute of Biological Sciences, , Av. Pres. Ant\u00f4nio Carlos, 6627, 31270-901, Belo Horizonte ,","Universidade Federal de Minas Gerais , Institute of Biological Sciences, , Av. Pres. Ant\u00f4nio Carlos, 6627, 31270-901, Belo Horizonte ,"],"raw_orcid":null,"affiliations":[{"raw_affiliation_string":"Department of Parasitology , Institute of Biological Sciences, , Av. Pres. Ant\u00f4nio Carlos, 6627, 31270-901, Belo Horizonte ,","institution_ids":["https://openalex.org/I4210096427"]},{"raw_affiliation_string":"Universidade Federal de Minas Gerais , Institute of Biological Sciences, , Av. Pres. Ant\u00f4nio Carlos, 6627, 31270-901, Belo Horizonte ,","institution_ids":["https://openalex.org/I110200422"]}]},{"author_position":"middle","author":{"id":"https://openalex.org/A5002548072","display_name":"Pedro Bastos","orcid":"https://orcid.org/0000-0003-3388-4204"},"institutions":[{"id":"https://openalex.org/I110200422","display_name":"Universidade Federal de Minas Gerais","ror":"https://ror.org/0176yjw32","country_code":"BR","type":"education","lineage":["https://openalex.org/I110200422"]},{"id":"https://openalex.org/I4210096427","display_name":"Institut des Sciences Biologiques","ror":"https://ror.org/00rydyx93","country_code":"FR","type":"facility","lineage":["https://openalex.org/I1294671590","https://openalex.org/I4210096427"]}],"countries":["BR","FR"],"is_corresponding":false,"raw_author_name":"Pedro Henrique Bastos","raw_affiliation_strings":["Department of Microbiology , Institute of Biological Sciences, , Av. Pres. Ant\u00f4nio Carlos, 6627, 31270-901, Belo Horizonte ,","Universidade Federal de Minas Gerais , Institute of Biological Sciences, , Av. Pres. Ant\u00f4nio Carlos, 6627, 31270-901, Belo Horizonte ,"],"raw_orcid":null,"affiliations":[{"raw_affiliation_string":"Department of Microbiology , Institute of Biological Sciences, , Av. Pres. Ant\u00f4nio Carlos, 6627, 31270-901, Belo Horizonte ,","institution_ids":["https://openalex.org/I4210096427"]},{"raw_affiliation_string":"Universidade Federal de Minas Gerais , Institute of Biological Sciences, , Av. Pres. Ant\u00f4nio Carlos, 6627, 31270-901, Belo Horizonte ,","institution_ids":["https://openalex.org/I110200422"]}]},{"author_position":"middle","author":{"id":"https://openalex.org/A5069759222","display_name":"Jodie Ashford","orcid":null},"institutions":[{"id":"https://openalex.org/I169199633","display_name":"Aston University","ror":"https://ror.org/05j0ve876","country_code":"GB","type":"education","lineage":["https://openalex.org/I169199633"]},{"id":"https://openalex.org/I181547552","display_name":"Baylor College of Medicine","ror":"https://ror.org/02pttbw34","country_code":"US","type":"education","lineage":["https://openalex.org/I181547552","https://openalex.org/I2801539370"]}],"countries":["GB","US"],"is_corresponding":false,"raw_author_name":"Jodie Ashford","raw_affiliation_strings":["Aston Centre for Artificial Intelligence Research and Application, Aston University , Aston Triangle B4 7ET, Birmingham ,","Baylor College of Medicine , Global Tuberculosis Program, Department of Pediatrics, , 1 Baylor Plz, Houston, TX 77030 ,","Immigrant and Global Health , Global Tuberculosis Program, Department of Pediatrics, , 1 Baylor Plz, Houston, TX 77030 ,"],"raw_orcid":null,"affiliations":[{"raw_affiliation_string":"Aston Centre for Artificial Intelligence Research and Application, Aston University , Aston Triangle B4 7ET, Birmingham ,","institution_ids":["https://openalex.org/I169199633"]},{"raw_affiliation_string":"Baylor College of Medicine , Global Tuberculosis Program, Department of Pediatrics, , 1 Baylor Plz, Houston, TX 77030 ,","institution_ids":["https://openalex.org/I181547552"]},{"raw_affiliation_string":"Immigrant and Global Health , Global Tuberculosis Program, Department of Pediatrics, , 1 Baylor Plz, Houston, TX 77030 ,","institution_ids":[]}]},{"author_position":"middle","author":{"id":"https://openalex.org/A5076983719","display_name":"Anik\u00f3 Ek\u00e1rt","orcid":"https://orcid.org/0000-0001-6967-5397"},"institutions":[{"id":"https://openalex.org/I169199633","display_name":"Aston University","ror":"https://ror.org/05j0ve876","country_code":"GB","type":"education","lineage":["https://openalex.org/I169199633"]}],"countries":["GB"],"is_corresponding":false,"raw_author_name":"Anik\u00f3 Ek\u00e1rt","raw_affiliation_strings":["Aston Centre for Artificial Intelligence Research and Application, Aston University , Aston Triangle B4 7ET, Birmingham ,"],"raw_orcid":null,"affiliations":[{"raw_affiliation_string":"Aston Centre for Artificial Intelligence Research and Application, Aston University , Aston Triangle B4 7ET, Birmingham ,","institution_ids":["https://openalex.org/I169199633"]}]},{"author_position":"middle","author":{"id":"https://openalex.org/A5062333789","display_name":"Talita Adelino","orcid":"https://orcid.org/0000-0002-1471-0084"},"institutions":[{"id":"https://openalex.org/I4210098174","display_name":"Ezequiel Dias Foundation","ror":"https://ror.org/01qgvp179","country_code":"BR","type":"facility","lineage":["https://openalex.org/I4210098174"]}],"countries":["BR"],"is_corresponding":false,"raw_author_name":"Talita Emile Ribeiro Adelino","raw_affiliation_strings":["Central Public Health Laboratory, Funda\u00e7\u00e3o Ezequiel Dias , R. Conde Pereira Carneiro, 80, 30510-010, Belo Horizonte ,"],"raw_orcid":null,"affiliations":[{"raw_affiliation_string":"Central Public Health Laboratory, Funda\u00e7\u00e3o Ezequiel Dias , R. Conde Pereira Carneiro, 80, 30510-010, Belo Horizonte ,","institution_ids":["https://openalex.org/I4210098174"]}]},{"author_position":"middle","author":{"id":null,"display_name":"Marcos Vinicius Ferreira Silva","orcid":null},"institutions":[{"id":"https://openalex.org/I4210098174","display_name":"Ezequiel Dias Foundation","ror":"https://ror.org/01qgvp179","country_code":"BR","type":"facility","lineage":["https://openalex.org/I4210098174"]}],"countries":["BR"],"is_corresponding":false,"raw_author_name":"Marcos Vinicius Ferreira Silva","raw_affiliation_strings":["Central Public Health Laboratory, Funda\u00e7\u00e3o Ezequiel Dias , R. Conde Pereira Carneiro, 80, 30510-010, Belo Horizonte ,"],"raw_orcid":null,"affiliations":[{"raw_affiliation_string":"Central Public Health Laboratory, Funda\u00e7\u00e3o Ezequiel Dias , R. Conde Pereira Carneiro, 80, 30510-010, Belo Horizonte ,","institution_ids":["https://openalex.org/I4210098174"]}]},{"author_position":"middle","author":{"id":"https://openalex.org/A5004594211","display_name":"Felipe Campos de Melo Iani","orcid":"https://orcid.org/0000-0002-3629-8529"},"institutions":[{"id":"https://openalex.org/I4210098174","display_name":"Ezequiel Dias Foundation","ror":"https://ror.org/01qgvp179","country_code":"BR","type":"facility","lineage":["https://openalex.org/I4210098174"]}],"countries":["BR"],"is_corresponding":false,"raw_author_name":"Felipe Campos de Melo Iani","raw_affiliation_strings":["Central Public Health Laboratory, Funda\u00e7\u00e3o Ezequiel Dias , R. Conde Pereira Carneiro, 80, 30510-010, Belo Horizonte ,"],"raw_orcid":null,"affiliations":[{"raw_affiliation_string":"Central Public Health Laboratory, Funda\u00e7\u00e3o Ezequiel Dias , R. Conde Pereira Carneiro, 80, 30510-010, Belo Horizonte ,","institution_ids":["https://openalex.org/I4210098174"]}]},{"author_position":"middle","author":{"id":"https://openalex.org/A5019513261","display_name":"Augusto C\u00e9sar Parreiras de Jesus","orcid":"https://orcid.org/0000-0002-2445-220X"},"institutions":[{"id":"https://openalex.org/I110200422","display_name":"Universidade Federal de Minas Gerais","ror":"https://ror.org/0176yjw32","country_code":"BR","type":"education","lineage":["https://openalex.org/I110200422"]}],"countries":["BR"],"is_corresponding":false,"raw_author_name":"Augusto C\u00e9sar Parreiras de Jesus","raw_affiliation_strings":["Federal University of Minas Gerais , School of Medicine, , Av. Prof. Alfredo Balena 190, 30130-100, Belo Horizonte ,","Post-Graduate Program in Infectious Diseases and Tropical Medicine , School of Medicine, , Av. Prof. Alfredo Balena 190, 30130-100, Belo Horizonte ,"],"raw_orcid":null,"affiliations":[{"raw_affiliation_string":"Federal University of Minas Gerais , School of Medicine, , Av. Prof. Alfredo Balena 190, 30130-100, Belo Horizonte ,","institution_ids":["https://openalex.org/I110200422"]},{"raw_affiliation_string":"Post-Graduate Program in Infectious Diseases and Tropical Medicine , School of Medicine, , Av. Prof. Alfredo Balena 190, 30130-100, Belo Horizonte ,","institution_ids":[]}]},{"author_position":"middle","author":{"id":"https://openalex.org/A5020483240","display_name":"Daniella Castanheira Bartholomeu","orcid":"https://orcid.org/0000-0003-0974-7357"},"institutions":[{"id":"https://openalex.org/I110200422","display_name":"Universidade Federal de Minas Gerais","ror":"https://ror.org/0176yjw32","country_code":"BR","type":"education","lineage":["https://openalex.org/I110200422"]},{"id":"https://openalex.org/I4210096427","display_name":"Institut des Sciences Biologiques","ror":"https://ror.org/00rydyx93","country_code":"FR","type":"facility","lineage":["https://openalex.org/I1294671590","https://openalex.org/I4210096427"]}],"countries":["BR","FR"],"is_corresponding":false,"raw_author_name":"Daniella Castanheira Bartholomeu","raw_affiliation_strings":["Department of Parasitology , Institute of Biological Sciences, , Av. Pres. Ant\u00f4nio Carlos, 6627, 31270-901, Belo Horizonte ,","Universidade Federal de Minas Gerais , Institute of Biological Sciences, , Av. Pres. Ant\u00f4nio Carlos, 6627, 31270-901, Belo Horizonte ,"],"raw_orcid":null,"affiliations":[{"raw_affiliation_string":"Department of Parasitology , Institute of Biological Sciences, , Av. Pres. Ant\u00f4nio Carlos, 6627, 31270-901, Belo Horizonte ,","institution_ids":["https://openalex.org/I4210096427"]},{"raw_affiliation_string":"Universidade Federal de Minas Gerais , Institute of Biological Sciences, , Av. Pres. Ant\u00f4nio Carlos, 6627, 31270-901, Belo Horizonte ,","institution_ids":["https://openalex.org/I110200422"]}]},{"author_position":"middle","author":{"id":"https://openalex.org/A5001551866","display_name":"Giliane de Souza Trindade","orcid":"https://orcid.org/0000-0003-0785-4298"},"institutions":[{"id":"https://openalex.org/I110200422","display_name":"Universidade Federal de Minas Gerais","ror":"https://ror.org/0176yjw32","country_code":"BR","type":"education","lineage":["https://openalex.org/I110200422"]},{"id":"https://openalex.org/I4210096427","display_name":"Institut des Sciences Biologiques","ror":"https://ror.org/00rydyx93","country_code":"FR","type":"facility","lineage":["https://openalex.org/I1294671590","https://openalex.org/I4210096427"]}],"countries":["BR","FR"],"is_corresponding":false,"raw_author_name":"Giliane de Souza Trindade","raw_affiliation_strings":["Department of Microbiology , Institute of Biological Sciences, , Av. Pres. Ant\u00f4nio Carlos, 6627, 31270-901, Belo Horizonte ,","Universidade Federal de Minas Gerais , Institute of Biological Sciences, , Av. Pres. Ant\u00f4nio Carlos, 6627, 31270-901, Belo Horizonte ,"],"raw_orcid":null,"affiliations":[{"raw_affiliation_string":"Department of Microbiology , Institute of Biological Sciences, , Av. Pres. Ant\u00f4nio Carlos, 6627, 31270-901, Belo Horizonte ,","institution_ids":["https://openalex.org/I4210096427"]},{"raw_affiliation_string":"Universidade Federal de Minas Gerais , Institute of Biological Sciences, , Av. Pres. Ant\u00f4nio Carlos, 6627, 31270-901, Belo Horizonte ,","institution_ids":["https://openalex.org/I110200422"]}]},{"author_position":"middle","author":{"id":"https://openalex.org/A5014878161","display_name":"Ricardo Toshio Fujiwara","orcid":"https://orcid.org/0000-0002-4713-575X"},"institutions":[{"id":"https://openalex.org/I110200422","display_name":"Universidade Federal de Minas Gerais","ror":"https://ror.org/0176yjw32","country_code":"BR","type":"education","lineage":["https://openalex.org/I110200422"]},{"id":"https://openalex.org/I4210096427","display_name":"Institut des Sciences Biologiques","ror":"https://ror.org/00rydyx93","country_code":"FR","type":"facility","lineage":["https://openalex.org/I1294671590","https://openalex.org/I4210096427"]}],"countries":["BR","FR"],"is_corresponding":false,"raw_author_name":"Ricardo Toshio Fujiwara","raw_affiliation_strings":["Department of Parasitology , Institute of Biological Sciences, , Av. Pres. Ant\u00f4nio Carlos, 6627, 31270-901, Belo Horizonte ,","Universidade Federal de Minas Gerais , Institute of Biological Sciences, , Av. Pres. Ant\u00f4nio Carlos, 6627, 31270-901, Belo Horizonte ,"],"raw_orcid":null,"affiliations":[{"raw_affiliation_string":"Department of Parasitology , Institute of Biological Sciences, , Av. Pres. Ant\u00f4nio Carlos, 6627, 31270-901, Belo Horizonte ,","institution_ids":["https://openalex.org/I4210096427"]},{"raw_affiliation_string":"Universidade Federal de Minas Gerais , Institute of Biological Sciences, , Av. Pres. Ant\u00f4nio Carlos, 6627, 31270-901, Belo Horizonte ,","institution_ids":["https://openalex.org/I110200422"]}]},{"author_position":"middle","author":{"id":"https://openalex.org/A5084954729","display_name":"Lilian Lacerda Bueno","orcid":"https://orcid.org/0000-0003-3510-4590"},"institutions":[{"id":"https://openalex.org/I110200422","display_name":"Universidade Federal de Minas Gerais","ror":"https://ror.org/0176yjw32","country_code":"BR","type":"education","lineage":["https://openalex.org/I110200422"]},{"id":"https://openalex.org/I4210096427","display_name":"Institut des Sciences Biologiques","ror":"https://ror.org/00rydyx93","country_code":"FR","type":"facility","lineage":["https://openalex.org/I1294671590","https://openalex.org/I4210096427"]}],"countries":["BR","FR"],"is_corresponding":false,"raw_author_name":"Lilian Lacerda Bueno","raw_affiliation_strings":["Department of Parasitology , Institute of Biological Sciences, , Av. Pres. Ant\u00f4nio Carlos, 6627, 31270-901, Belo Horizonte ,","Universidade Federal de Minas Gerais , Institute of Biological Sciences, , Av. Pres. Ant\u00f4nio Carlos, 6627, 31270-901, Belo Horizonte ,"],"raw_orcid":null,"affiliations":[{"raw_affiliation_string":"Department of Parasitology , Institute of Biological Sciences, , Av. Pres. Ant\u00f4nio Carlos, 6627, 31270-901, Belo Horizonte ,","institution_ids":["https://openalex.org/I4210096427"]},{"raw_affiliation_string":"Universidade Federal de Minas Gerais , Institute of Biological Sciences, , Av. Pres. Ant\u00f4nio Carlos, 6627, 31270-901, Belo Horizonte ,","institution_ids":["https://openalex.org/I110200422"]}]},{"author_position":"last","author":{"id":"https://openalex.org/A5063430399","display_name":"Francisco Pereira Lobo","orcid":"https://orcid.org/0000-0002-9671-9313"},"institutions":[{"id":"https://openalex.org/I110200422","display_name":"Universidade Federal de Minas Gerais","ror":"https://ror.org/0176yjw32","country_code":"BR","type":"education","lineage":["https://openalex.org/I110200422"]},{"id":"https://openalex.org/I4210096427","display_name":"Institut des Sciences Biologiques","ror":"https://ror.org/00rydyx93","country_code":"FR","type":"facility","lineage":["https://openalex.org/I1294671590","https://openalex.org/I4210096427"]}],"countries":["BR","FR"],"is_corresponding":false,"raw_author_name":"Francisco Pereira Lobo","raw_affiliation_strings":["Department of Genetics , Ecology and Evolution, Institute of Biological Sciences, , Av. Pres. Ant\u00f4nio Carlos, 6627, 31270-901, Belo Horizonte ,","Universidade Federal de Minas Gerais , Ecology and Evolution, Institute of Biological Sciences, , Av. Pres. Ant\u00f4nio Carlos, 6627, 31270-901, Belo Horizonte ,"],"raw_orcid":"https://orcid.org/0000-0002-9671-9313","affiliations":[{"raw_affiliation_string":"Department of Genetics , Ecology and Evolution, Institute of Biological Sciences, , Av. Pres. Ant\u00f4nio Carlos, 6627, 31270-901, Belo Horizonte ,","institution_ids":["https://openalex.org/I4210096427"]},{"raw_affiliation_string":"Universidade Federal de Minas Gerais , Ecology and Evolution, Institute of Biological Sciences, , Av. Pres. Ant\u00f4nio Carlos, 6627, 31270-901, Belo Horizonte ,","institution_ids":["https://openalex.org/I110200422"]}]}],"institutions":[],"countries_distinct_count":4,"institutions_distinct_count":8,"corresponding_author_ids":[],"corresponding_institution_ids":[],"apc_list":{"value":4011,"currency":"USD","value_usd":4011},"apc_paid":{"value":4011,"currency":"USD","value_usd":4011},"fwci":0.9992,"has_fulltext":true,"cited_by_count":6,"citation_normalized_percentile":{"value":0.74999191,"is_in_top_1_percent":false,"is_in_top_10_percent":false},"cited_by_percentile_year":{"min":96,"max":99},"biblio":{"volume":"25","issue":"6","first_page":null,"last_page":null},"is_retracted":false,"is_paratext":false,"is_xpac":false,"primary_topic":{"id":"https://openalex.org/T12576","display_name":"vaccines and immunoinformatics approaches","score":0.9997000098228455,"subfield":{"id":"https://openalex.org/subfields/1312","display_name":"Molecular Biology"},"field":{"id":"https://openalex.org/fields/13","display_name":"Biochemistry, Genetics and Molecular Biology"},"domain":{"id":"https://openalex.org/domains/1","display_name":"Life Sciences"}},"topics":[{"id":"https://openalex.org/T12576","display_name":"vaccines and immunoinformatics approaches","score":0.9997000098228455,"subfield":{"id":"https://openalex.org/subfields/1312","display_name":"Molecular Biology"},"field":{"id":"https://openalex.org/fields/13","display_name":"Biochemistry, Genetics and Molecular Biology"},"domain":{"id":"https://openalex.org/domains/1","display_name":"Life Sciences"}},{"id":"https://openalex.org/T11767","display_name":"Poxvirus research and outbreaks","score":0.9991999864578247,"subfield":{"id":"https://openalex.org/subfields/2406","display_name":"Virology"},"field":{"id":"https://openalex.org/fields/24","display_name":"Immunology and Microbiology"},"domain":{"id":"https://openalex.org/domains/1","display_name":"Life Sciences"}},{"id":"https://openalex.org/T10625","display_name":"Herpesvirus Infections and Treatments","score":0.9965999722480774,"subfield":{"id":"https://openalex.org/subfields/2713","display_name":"Epidemiology"},"field":{"id":"https://openalex.org/fields/27","display_name":"Medicine"},"domain":{"id":"https://openalex.org/domains/4","display_name":"Health Sciences"}}],"keywords":[{"id":"https://openalex.org/keywords/phylogenetics","display_name":"Phylogenetics","score":0.6847202181816101},{"id":"https://openalex.org/keywords/epitope","display_name":"Epitope","score":0.6284105181694031},{"id":"https://openalex.org/keywords/vaccinia","display_name":"Vaccinia","score":0.5812088251113892},{"id":"https://openalex.org/keywords/monkeypox","display_name":"Monkeypox","score":0.5284590125083923},{"id":"https://openalex.org/keywords/computational-biology","display_name":"Computational biology","score":0.5222264528274536},{"id":"https://openalex.org/keywords/biology","display_name":"Biology","score":0.4892744719982147},{"id":"https://openalex.org/keywords/computer-science","display_name":"Computer science","score":0.3987027108669281},{"id":"https://openalex.org/keywords/virology","display_name":"Virology","score":0.3544699549674988},{"id":"https://openalex.org/keywords/immunology","display_name":"Immunology","score":0.2578021287918091},{"id":"https://openalex.org/keywords/genetics","display_name":"Genetics","score":0.15654754638671875},{"id":"https://openalex.org/keywords/antibody","display_name":"Antibody","score":0.1459445357322693},{"id":"https://openalex.org/keywords/gene","display_name":"Gene","score":0.0800466537475586}],"concepts":[{"id":"https://openalex.org/C90132467","wikidata":"https://www.wikidata.org/wiki/Q171184","display_name":"Phylogenetics","level":3,"score":0.6847202181816101},{"id":"https://openalex.org/C195616568","wikidata":"https://www.wikidata.org/wiki/Q128711","display_name":"Epitope","level":3,"score":0.6284105181694031},{"id":"https://openalex.org/C2781356689","wikidata":"https://www.wikidata.org/wiki/Q1986297","display_name":"Vaccinia","level":4,"score":0.5812088251113892},{"id":"https://openalex.org/C2778011067","wikidata":"https://www.wikidata.org/wiki/Q382370","display_name":"Monkeypox","level":5,"score":0.5284590125083923},{"id":"https://openalex.org/C70721500","wikidata":"https://www.wikidata.org/wiki/Q177005","display_name":"Computational biology","level":1,"score":0.5222264528274536},{"id":"https://openalex.org/C86803240","wikidata":"https://www.wikidata.org/wiki/Q420","display_name":"Biology","level":0,"score":0.4892744719982147},{"id":"https://openalex.org/C41008148","wikidata":"https://www.wikidata.org/wiki/Q21198","display_name":"Computer science","level":0,"score":0.3987027108669281},{"id":"https://openalex.org/C159047783","wikidata":"https://www.wikidata.org/wiki/Q7215","display_name":"Virology","level":1,"score":0.3544699549674988},{"id":"https://openalex.org/C203014093","wikidata":"https://www.wikidata.org/wiki/Q101929","display_name":"Immunology","level":1,"score":0.2578021287918091},{"id":"https://openalex.org/C54355233","wikidata":"https://www.wikidata.org/wiki/Q7162","display_name":"Genetics","level":1,"score":0.15654754638671875},{"id":"https://openalex.org/C159654299","wikidata":"https://www.wikidata.org/wiki/Q79460","display_name":"Antibody","level":2,"score":0.1459445357322693},{"id":"https://openalex.org/C104317684","wikidata":"https://www.wikidata.org/wiki/Q7187","display_name":"Gene","level":2,"score":0.0800466537475586},{"id":"https://openalex.org/C40767141","wikidata":"https://www.wikidata.org/wiki/Q285697","display_name":"Recombinant DNA","level":3,"score":0.0}],"mesh":[{"descriptor_ui":"D006801","descriptor_name":"Humans","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D006801","descriptor_name":"Humans","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D006801","descriptor_name":"Humans","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D006801","descriptor_name":"Humans","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D006801","descriptor_name":"Humans","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D006801","descriptor_name":"Humans","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D010802","descriptor_name":"Phylogeny","qualifier_ui":null,"qualifier_name":null,"is_major_topic":true},{"descriptor_ui":"D010802","descriptor_name":"Phylogeny","qualifier_ui":null,"qualifier_name":null,"is_major_topic":true},{"descriptor_ui":"D010802","descriptor_name":"Phylogeny","qualifier_ui":null,"qualifier_name":null,"is_major_topic":true},{"descriptor_ui":"D010802","descriptor_name":"Phylogeny","qualifier_ui":null,"qualifier_name":null,"is_major_topic":true},{"descriptor_ui":"D010802","descriptor_name":"Phylogeny","qualifier_ui":null,"qualifier_name":null,"is_major_topic":true},{"descriptor_ui":"D010802","descriptor_name":"Phylogeny","qualifier_ui":null,"qualifier_name":null,"is_major_topic":true},{"descriptor_ui":"D014616","descriptor_name":"Vaccinia virus","qualifier_ui":"Q000235","qualifier_name":"genetics","is_major_topic":false},{"descriptor_ui":"D014616","descriptor_name":"Vaccinia virus","qualifier_ui":"Q000235","qualifier_name":"genetics","is_major_topic":false},{"descriptor_ui":"D014616","descriptor_name":"Vaccinia virus","qualifier_ui":"Q000235","qualifier_name":"genetics","is_major_topic":false},{"descriptor_ui":"D014616","descriptor_name":"Vaccinia virus","qualifier_ui":"Q000235","qualifier_name":"genetics","is_major_topic":false},{"descriptor_ui":"D014616","descriptor_name":"Vaccinia virus","qualifier_ui":"Q000235","qualifier_name":"genetics","is_major_topic":false},{"descriptor_ui":"D014616","descriptor_name":"Vaccinia virus","qualifier_ui":"Q000235","qualifier_name":"genetics","is_major_topic":false},{"descriptor_ui":"D014616","descriptor_name":"Vaccinia virus","qualifier_ui":"Q000276","qualifier_name":"immunology","is_major_topic":false},{"descriptor_ui":"D014616","descriptor_name":"Vaccinia virus","qualifier_ui":"Q000276","qualifier_name":"immunology","is_major_topic":false},{"descriptor_ui":"D014616","descriptor_name":"Vaccinia virus","qualifier_ui":"Q000276","qualifier_name":"immunology","is_major_topic":false},{"descriptor_ui":"D014616","descriptor_name":"Vaccinia virus","qualifier_ui":"Q000276","qualifier_name":"immunology","is_major_topic":false},{"descriptor_ui":"D014616","descriptor_name":"Vaccinia virus","qualifier_ui":"Q000276","qualifier_name":"immunology","is_major_topic":false},{"descriptor_ui":"D014616","descriptor_name":"Vaccinia virus","qualifier_ui":"Q000276","qualifier_name":"immunology","is_major_topic":false},{"descriptor_ui":"D018155","descriptor_name":"Orthopoxvirus","qualifier_ui":"Q000235","qualifier_name":"genetics","is_major_topic":false},{"descriptor_ui":"D018155","descriptor_name":"Orthopoxvirus","qualifier_ui":"Q000235","qualifier_name":"genetics","is_major_topic":false},{"descriptor_ui":"D018155","descriptor_name":"Orthopoxvirus","qualifier_ui":"Q000235","qualifier_name":"genetics","is_major_topic":false},{"descriptor_ui":"D018155","descriptor_name":"Orthopoxvirus","qualifier_ui":"Q000235","qualifier_name":"genetics","is_major_topic":false},{"descriptor_ui":"D018155","descriptor_name":"Orthopoxvirus","qualifier_ui":"Q000235","qualifier_name":"genetics","is_major_topic":false},{"descriptor_ui":"D018155","descriptor_name":"Orthopoxvirus","qualifier_ui":"Q000235","qualifier_name":"genetics","is_major_topic":false},{"descriptor_ui":"D018155","descriptor_name":"Orthopoxvirus","qualifier_ui":"Q000276","qualifier_name":"immunology","is_major_topic":false},{"descriptor_ui":"D018155","descriptor_name":"Orthopoxvirus","qualifier_ui":"Q000276","qualifier_name":"immunology","is_major_topic":false},{"descriptor_ui":"D018155","descriptor_name":"Orthopoxvirus","qualifier_ui":"Q000276","qualifier_name":"immunology","is_major_topic":false},{"descriptor_ui":"D018155","descriptor_name":"Orthopoxvirus","qualifier_ui":"Q000276","qualifier_name":"immunology","is_major_topic":false},{"descriptor_ui":"D018155","descriptor_name":"Orthopoxvirus","qualifier_ui":"Q000276","qualifier_name":"immunology","is_major_topic":false},{"descriptor_ui":"D018155","descriptor_name":"Orthopoxvirus","qualifier_ui":"Q000276","qualifier_name":"immunology","is_major_topic":false},{"descriptor_ui":"D018985","descriptor_name":"Epitopes, B-Lymphocyte","qualifier_ui":"Q000276","qualifier_name":"immunology","is_major_topic":true},{"descriptor_ui":"D018985","descriptor_name":"Epitopes, B-Lymphocyte","qualifier_ui":"Q000276","qualifier_name":"immunology","is_major_topic":true},{"descriptor_ui":"D018985","descriptor_name":"Epitopes, B-Lymphocyte","qualifier_ui":"Q000276","qualifier_name":"immunology","is_major_topic":true},{"descriptor_ui":"D018985","descriptor_name":"Epitopes, B-Lymphocyte","qualifier_ui":"Q000276","qualifier_name":"immunology","is_major_topic":true},{"descriptor_ui":"D018985","descriptor_name":"Epitopes, B-Lymphocyte","qualifier_ui":"Q000276","qualifier_name":"immunology","is_major_topic":true},{"descriptor_ui":"D018985","descriptor_name":"Epitopes, B-Lymphocyte","qualifier_ui":"Q000276","qualifier_name":"immunology","is_major_topic":true},{"descriptor_ui":"D019295","descriptor_name":"Computational Biology","qualifier_ui":"Q000379","qualifier_name":"methods","is_major_topic":false},{"descriptor_ui":"D019295","descriptor_name":"Computational Biology","qualifier_ui":"Q000379","qualifier_name":"methods","is_major_topic":false},{"descriptor_ui":"D019295","descriptor_name":"Computational Biology","qualifier_ui":"Q000379","qualifier_name":"methods","is_major_topic":false},{"descriptor_ui":"D019295","descriptor_name":"Computational Biology","qualifier_ui":"Q000379","qualifier_name":"methods","is_major_topic":false},{"descriptor_ui":"D019295","descriptor_name":"Computational Biology","qualifier_ui":"Q000379","qualifier_name":"methods","is_major_topic":false},{"descriptor_ui":"D019295","descriptor_name":"Computational Biology","qualifier_ui":"Q000379","qualifier_name":"methods","is_major_topic":false},{"descriptor_ui":"D045908","descriptor_name":"Mpox, Monkeypox","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D045908","descriptor_name":"Mpox, Monkeypox","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D045908","descriptor_name":"Mpox (monkeypox)","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false}],"locations_count":5,"locations":[{"id":"doi:10.1093/bib/bbae527","is_oa":true,"landing_page_url":"https://doi.org/10.1093/bib/bbae527","pdf_url":"https://academic.oup.com/bib/article-pdf/25/6/bbae527/60441405/bbae527.pdf","source":{"id":"https://openalex.org/S91767247","display_name":"Briefings in Bioinformatics","issn_l":"1467-5463","issn":["1467-5463","1477-4054"],"is_oa":true,"is_in_doaj":true,"is_core":true,"host_organization":"https://openalex.org/P4310311648","host_organization_name":"Oxford University Press","host_organization_lineage":["https://openalex.org/P4310311648","https://openalex.org/P4310311647"],"host_organization_lineage_names":["Oxford University Press","University of Oxford"],"type":"journal"},"license":"cc-by","license_id":"https://openalex.org/licenses/cc-by","version":"publishedVersion","is_accepted":true,"is_published":true,"raw_source_name":"Briefings in Bioinformatics","raw_type":"journal-article"},{"id":"pmid:39503522","is_oa":false,"landing_page_url":"https://pubmed.ncbi.nlm.nih.gov/39503522","pdf_url":null,"source":{"id":"https://openalex.org/S4306525036","display_name":"PubMed","issn_l":null,"issn":null,"is_oa":false,"is_in_doaj":false,"is_core":false,"host_organization":"https://openalex.org/I1299303238","host_organization_name":"National Institutes of Health","host_organization_lineage":["https://openalex.org/I1299303238"],"host_organization_lineage_names":[],"type":"repository"},"license":null,"license_id":null,"version":"publishedVersion","is_accepted":true,"is_published":true,"raw_source_name":"Briefings in bioinformatics","raw_type":null},{"id":"pmh:oai:research-information.bris.ac.uk:openaire/0151de10-275f-4b74-a89b-f2c5b87b9ba3","is_oa":true,"landing_page_url":"https://research-information.bris.ac.uk/en/publications/0151de10-275f-4b74-a89b-f2c5b87b9ba3","pdf_url":null,"source":{"id":"https://openalex.org/S4306400895","display_name":"Bristol Research (University of Bristol)","issn_l":null,"issn":null,"is_oa":false,"is_in_doaj":false,"is_core":false,"host_organization":"https://openalex.org/I36234482","host_organization_name":"University of Bristol","host_organization_lineage":["https://openalex.org/I36234482"],"host_organization_lineage_names":[],"type":"repository"},"license":"cc-by","license_id":"https://openalex.org/licenses/cc-by","version":"publishedVersion","is_accepted":true,"is_published":true,"raw_source_name":"Campelo, F, Grossi de Oliveira, A L, Reis-Cunha, J, Gomes Fraga, V, Bastos, P H, Ashford, J, Ek\u00e1rt, A, Ribeiro Adelino, T, Silva, M V, de Melo Iani, F, Parreiras de Jesus, A C, Bartholomeu, D, de Souza Trindade, G, Fujiwara, R, Lacerda Bueno, L & Pereira Lobo, F 2024, 'Phylogeny-aware linear B-cell epitope predictor detects targets associated with immune response to orthopoxviruses', Briefings in Bioinformatics, vol. 25, no. 6, bbae527. https://doi.org/10.1093/bib/bbae527","raw_type":"info:eu-repo/semantics/publishedVersion"},{"id":"pmh:oai:publications.aston.ac.uk:46967","is_oa":true,"landing_page_url":"https://publications.aston.ac.uk/view/author/e731149615ac85d43265dfea83ad1aec.html>,","pdf_url":"https://publications.aston.ac.uk/id/eprint/46967/1/bbae527.pdf","source":{"id":"https://openalex.org/S4306400483","display_name":"Aston Publications Explorer (Aston University)","issn_l":null,"issn":null,"is_oa":false,"is_in_doaj":false,"is_core":false,"host_organization":"https://openalex.org/I169199633","host_organization_name":"Aston University","host_organization_lineage":["https://openalex.org/I169199633"],"host_organization_lineage_names":[],"type":"repository"},"license":null,"license_id":null,"version":"submittedVersion","is_accepted":false,"is_published":false,"raw_source_name":null,"raw_type":"Article"},{"id":"pmh:oai:pubmedcentral.nih.gov:11538998","is_oa":true,"landing_page_url":"https://www.ncbi.nlm.nih.gov/pmc/articles/11538998","pdf_url":"https://pmc.ncbi.nlm.nih.gov/articles/PMC11538998/pdf/bbae527.pdf","source":{"id":"https://openalex.org/S2764455111","display_name":"PubMed Central","issn_l":null,"issn":null,"is_oa":true,"is_in_doaj":false,"is_core":false,"host_organization":"https://openalex.org/I1299303238","host_organization_name":"National Institutes of Health","host_organization_lineage":["https://openalex.org/I1299303238"],"host_organization_lineage_names":[],"type":"repository"},"license":"cc-by","license_id":"https://openalex.org/licenses/cc-by","version":"submittedVersion","is_accepted":false,"is_published":false,"raw_source_name":"Brief Bioinform","raw_type":"Text"}],"best_oa_location":{"id":"doi:10.1093/bib/bbae527","is_oa":true,"landing_page_url":"https://doi.org/10.1093/bib/bbae527","pdf_url":"https://academic.oup.com/bib/article-pdf/25/6/bbae527/60441405/bbae527.pdf","source":{"id":"https://openalex.org/S91767247","display_name":"Briefings in Bioinformatics","issn_l":"1467-5463","issn":["1467-5463","1477-4054"],"is_oa":true,"is_in_doaj":true,"is_core":true,"host_organization":"https://openalex.org/P4310311648","host_organization_name":"Oxford University Press","host_organization_lineage":["https://openalex.org/P4310311648","https://openalex.org/P4310311647"],"host_organization_lineage_names":["Oxford University Press","University of Oxford"],"type":"journal"},"license":"cc-by","license_id":"https://openalex.org/licenses/cc-by","version":"publishedVersion","is_accepted":true,"is_published":true,"raw_source_name":"Briefings in Bioinformatics","raw_type":"journal-article"},"sustainable_development_goals":[{"score":0.6100000143051147,"display_name":"Good health and well-being","id":"https://metadata.un.org/sdg/3"}],"awards":[{"id":"https://openalex.org/G1575634772","display_name":null,"funder_award_id":"406441/2022-7","funder_id":"https://openalex.org/F4320322025","funder_display_name":"Conselho Nacional de Desenvolvimento Cient\u00edfico e Tecnol\u00f3gico"},{"id":"https://openalex.org/G2858674439","display_name":null,"funder_award_id":"APQ-4035/17","funder_id":"https://openalex.org/F4320322980","funder_display_name":"Funda\u00e7\u00e3o de Amparo \u00e0 Pesquisa do Estado de Minas Gerais"},{"id":"https://openalex.org/G3109903048","display_name":null,"funder_award_id":"403278/2023-6","funder_id":"https://openalex.org/F4320322025","funder_display_name":"Conselho Nacional de Desenvolvimento Cient\u00edfico e Tecnol\u00f3gico"},{"id":"https://openalex.org/G3720842852","display_name":null,"funder_award_id":"305514/2022-9","funder_id":"https://openalex.org/F4320322025","funder_display_name":"Conselho Nacional de Desenvolvimento Cient\u00edfico e Tecnol\u00f3gico"},{"id":"https://openalex.org/G5436073602","display_name":null,"funder_award_id":"BIP-00123-23","funder_id":"https://openalex.org/F4320322980","funder_display_name":"Funda\u00e7\u00e3o de Amparo \u00e0 Pesquisa do Estado de Minas Gerais"},{"id":"https://openalex.org/G5817422319","display_name":"Characterising the influence of parasite variation on visceral leishmaniasis.","funder_award_id":"MR/T016019/1","funder_id":"https://openalex.org/F4320334626","funder_display_name":"Medical Research Council"},{"id":"https://openalex.org/G5962888089","display_name":null,"funder_award_id":"RED-00067-23","funder_id":"https://openalex.org/F4320322980","funder_display_name":"Funda\u00e7\u00e3o de Amparo \u00e0 Pesquisa do Estado de Minas Gerais"},{"id":"https://openalex.org/G6756993358","display_name":null,"funder_award_id":"/2022-9","funder_id":"https://openalex.org/F4320322025","funder_display_name":"Conselho Nacional de Desenvolvimento Cient\u00edfico e Tecnol\u00f3gico"},{"id":"https://openalex.org/G7075427294","display_name":"EPSRC Core Equipment for Aston University","funder_award_id":"EP/V036106/1","funder_id":"https://openalex.org/F4320334627","funder_display_name":"Engineering and Physical Sciences Research Council"},{"id":"https://openalex.org/G777230785","display_name":null,"funder_award_id":"405249/2022-5","funder_id":"https://openalex.org/F4320322025","funder_display_name":"Conselho Nacional de Desenvolvimento Cient\u00edfico e Tecnol\u00f3gico"},{"id":"https://openalex.org/G8716184243","display_name":null,"funder_award_id":"310311/2023-3","funder_id":"https://openalex.org/F4320322025","funder_display_name":"Conselho Nacional de Desenvolvimento Cient\u00edfico e Tecnol\u00f3gico"}],"funders":[{"id":"https://openalex.org/F4320321992","display_name":"Minist\u00e9rio da Ci\u00eancia, Tecnologia e Inova\u00e7\u00e3o","ror":"https://ror.org/050zdnc69"},{"id":"https://openalex.org/F4320322025","display_name":"Conselho Nacional de Desenvolvimento Cient\u00edfico e Tecnol\u00f3gico","ror":"https://ror.org/03swz6y49"},{"id":"https://openalex.org/F4320322980","display_name":"Funda\u00e7\u00e3o de Amparo \u00e0 Pesquisa do Estado de Minas Gerais","ror":"https://ror.org/00nc55f03"},{"id":"https://openalex.org/F4320334626","display_name":"Medical Research Council","ror":"https://ror.org/03x94j517"},{"id":"https://openalex.org/F4320334627","display_name":"Engineering and Physical Sciences Research Council","ror":"https://ror.org/0439y7842"}],"has_content":{"grobid_xml":true,"pdf":true},"content_urls":{"pdf":"https://content.openalex.org/works/W4404112271.pdf","grobid_xml":"https://content.openalex.org/works/W4404112271.grobid-xml"},"referenced_works_count":42,"referenced_works":["https://openalex.org/W70790455","https://openalex.org/W2005659792","https://openalex.org/W2013410948","https://openalex.org/W2017721547","https://openalex.org/W2055043387","https://openalex.org/W2113878642","https://openalex.org/W2120683612","https://openalex.org/W2149984099","https://openalex.org/W2157395790","https://openalex.org/W2471758693","https://openalex.org/W2611314002","https://openalex.org/W2611974824","https://openalex.org/W2768586468","https://openalex.org/W2888728157","https://openalex.org/W2898389621","https://openalex.org/W2975578922","https://openalex.org/W2998499403","https://openalex.org/W3015796860","https://openalex.org/W3086901785","https://openalex.org/W3102027041","https://openalex.org/W3112376646","https://openalex.org/W3137649039","https://openalex.org/W3146944767","https://openalex.org/W3162566731","https://openalex.org/W3164264961","https://openalex.org/W3177226227","https://openalex.org/W3186767196","https://openalex.org/W4225264859","https://openalex.org/W4251379442","https://openalex.org/W4251386234","https://openalex.org/W4285043049","https://openalex.org/W4285803635","https://openalex.org/W4308773001","https://openalex.org/W4322741048","https://openalex.org/W4327550249","https://openalex.org/W4364354112","https://openalex.org/W4365510370","https://openalex.org/W4380577311","https://openalex.org/W4385604343","https://openalex.org/W4386412401","https://openalex.org/W4387439925","https://openalex.org/W4392886136"],"related_works":["https://openalex.org/W2031710541","https://openalex.org/W4312205156","https://openalex.org/W4378651324","https://openalex.org/W4311511477","https://openalex.org/W4389060959","https://openalex.org/W2943342539","https://openalex.org/W4378807269","https://openalex.org/W4294754112","https://openalex.org/W2224099394","https://openalex.org/W2205639271"],"abstract_inverted_index":{"We":[0,80],"introduce":[1],"a":[2,21,48,133],"phylogeny-aware":[3,130],"framework":[4],"for":[5,66,76,115],"predicting":[6,88],"linear":[7],"B-cell":[8],"epitope":[9],"(LBCE)-containing":[10],"regions":[11],"within":[12],"proteins.":[13],"Our":[14],"approach":[15,86],"leverages":[16],"evolutionary":[17],"information":[18],"by":[19,55,87],"using":[20,44,103],"taxonomic":[22],"scaffold":[23],"to":[24,40,70,126,136],"build":[25],"models":[26,34],"trained":[27],"on":[28],"hierarchically":[29],"structured":[30],"data.":[31],"The":[32],"resulting":[33],"present":[35],"performance":[36],"equivalent":[37],"or":[38],"superior":[39],"generalist":[41],"methods,":[42],"despite":[43],"simpler":[45],"features":[46],"and":[47,95],"fraction":[49],"of":[50,63,74,84,100,111,119,129,141],"the":[51,61,72,82,92,109,116,127,138],"data":[52,65],"volume":[53],"required":[54],"current":[56],"state-of-the-art":[57],"predictors.":[58],"This":[59],"allows":[60],"utilization":[62],"available":[64],"major":[67],"pathogen":[68],"lineages":[69],"facilitate":[71,137],"prediction":[73],"LBCEs":[75,90],"emerging":[77],"infectious":[78],"agents.":[79],"demonstrate":[81],"efficacy":[83],"our":[85],"new":[89],"in":[91],"monkeypox":[93],"(MPXV)":[94],"vaccinia":[96],"viruses.":[97],"Experimental":[98],"validation":[99],"selected":[101],"targets":[102],"sera":[104],"from":[105],"infected":[106],"patients":[107],"confirms":[108],"presence":[110],"LBCEs,":[112],"including":[113],"candidates":[114],"differential":[117],"serodiagnosis":[118],"recent":[120],"MPXV":[121],"infections.":[122],"These":[123],"results":[124],"point":[125],"use":[128],"predictors":[131],"as":[132],"useful":[134],"strategy":[135],"targeted":[139],"development":[140],"immunodiagnostic":[142],"tools.":[143]},"counts_by_year":[{"year":2026,"cited_by_count":3},{"year":2025,"cited_by_count":3}],"updated_date":"2026-07-15T18:14:33.161393","created_date":"2025-10-10T00:00:00"}
