{"id":"https://openalex.org/W4403084512","doi":"https://doi.org/10.1093/bib/bbae485","title":"Recover then aggregate: unified cross-modal deep clustering with global structural information for single-cell data","display_name":"Recover then aggregate: unified cross-modal deep clustering with global structural information for single-cell data","publication_year":2024,"publication_date":"2024-09-23","ids":{"openalex":"https://openalex.org/W4403084512","doi":"https://doi.org/10.1093/bib/bbae485","pmid":"https://pubmed.ncbi.nlm.nih.gov/39356327"},"language":"en","primary_location":{"id":"doi:10.1093/bib/bbae485","is_oa":true,"landing_page_url":"https://doi.org/10.1093/bib/bbae485","pdf_url":"https://academic.oup.com/bib/article-pdf/25/6/bbae485/59465194/bbae485.pdf","source":{"id":"https://openalex.org/S91767247","display_name":"Briefings in Bioinformatics","issn_l":"1467-5463","issn":["1467-5463","1477-4054"],"is_oa":true,"is_in_doaj":true,"is_core":true,"host_organization":"https://openalex.org/P4310311648","host_organization_name":"Oxford University Press","host_organization_lineage":["https://openalex.org/P4310311648","https://openalex.org/P4310311647"],"host_organization_lineage_names":["Oxford University Press","University of Oxford"],"type":"journal"},"license":"cc-by","license_id":"https://openalex.org/licenses/cc-by","version":"publishedVersion","is_accepted":true,"is_published":true,"raw_source_name":"Briefings in Bioinformatics","raw_type":"journal-article"},"type":"article","indexed_in":["crossref","doaj","pubmed"],"open_access":{"is_oa":true,"oa_status":"gold","oa_url":"https://academic.oup.com/bib/article-pdf/25/6/bbae485/59465194/bbae485.pdf","any_repository_has_fulltext":true},"authorships":[{"author_position":"first","author":{"id":"https://openalex.org/A5100441384","display_name":"Ziyi Wang","orcid":"https://orcid.org/0000-0003-1884-8053"},"institutions":[{"id":"https://openalex.org/I200296433","display_name":"Chinese Academy of Medical Sciences & Peking Union Medical College","ror":"https://ror.org/02drdmm93","country_code":"CN","type":"education","lineage":["https://openalex.org/I200296433"]},{"id":"https://openalex.org/I4210126592","display_name":"National Clinical Research","ror":"https://ror.org/03ddkvp86","country_code":"US","type":"facility","lineage":["https://openalex.org/I4210126592"]},{"id":"https://openalex.org/I4210140515","display_name":"First Hospital of China Medical University","ror":"https://ror.org/04wjghj95","country_code":"CN","type":"healthcare","lineage":["https://openalex.org/I4210140515"]},{"id":"https://openalex.org/I91656880","display_name":"China Medical University","ror":"https://ror.org/032d4f246","country_code":"CN","type":"education","lineage":["https://openalex.org/I91656880"]}],"countries":["CN","US"],"is_corresponding":false,"raw_author_name":"Ziyi Wang","raw_affiliation_strings":["Chinese Academy of Medical Sciences and Peking Union Medical College , Department of Thoracic Surgery, National Cancer Center/National Clinical Research Center for Cancer/Cancer Hospital, , Beijing 100730 ,","Department of Surgical Oncology and General Surgery, First Hospital of China Medical University , Shenyang 110001 ,","Department of Thoracic Surgery, The First Hospital of China Medical University , No.155 North Nanjing Street, Shenyang 110001 ,","Section of Esophageal and Mediastinal Oncology , Department of Thoracic Surgery, National Cancer Center/National Clinical Research Center for Cancer/Cancer Hospital, , Beijing 100730 ,"],"raw_orcid":null,"affiliations":[{"raw_affiliation_string":"Chinese Academy of Medical Sciences and Peking Union Medical College , Department of Thoracic Surgery, National Cancer Center/National Clinical Research Center for Cancer/Cancer Hospital, , Beijing 100730 ,","institution_ids":["https://openalex.org/I200296433","https://openalex.org/I4210126592"]},{"raw_affiliation_string":"Department of Surgical Oncology and General Surgery, First Hospital of China Medical University , Shenyang 110001 ,","institution_ids":["https://openalex.org/I4210140515","https://openalex.org/I91656880"]},{"raw_affiliation_string":"Department of Thoracic Surgery, The First Hospital of China Medical University , No.155 North Nanjing Street, Shenyang 110001 ,","institution_ids":["https://openalex.org/I4210140515","https://openalex.org/I91656880"]},{"raw_affiliation_string":"Section of Esophageal and Mediastinal Oncology , Department of Thoracic Surgery, National Cancer Center/National Clinical Research Center for Cancer/Cancer Hospital, , Beijing 100730 ,","institution_ids":["https://openalex.org/I4210126592"]}]},{"author_position":"middle","author":{"id":"https://openalex.org/A5101519162","display_name":"Peng Luo","orcid":"https://orcid.org/0000-0002-9668-4771"},"institutions":[{"id":"https://openalex.org/I151075929","display_name":"Army Medical University","ror":"https://ror.org/05w21nn13","country_code":"CN","type":"education","lineage":["https://openalex.org/I151075929"]},{"id":"https://openalex.org/I4210117763","display_name":"Xinqiao Hospital","ror":"https://ror.org/02d217z27","country_code":"CN","type":"healthcare","lineage":["https://openalex.org/I4210117763"]}],"countries":["CN"],"is_corresponding":false,"raw_author_name":"Peng Luo","raw_affiliation_strings":["Army Medical University , Xinqiao Hospital, , Chongqing 400038 ,","Department of Thoracic Surgery , Xinqiao Hospital, , Chongqing 400038 ,"],"raw_orcid":null,"affiliations":[{"raw_affiliation_string":"Army Medical University , Xinqiao Hospital, , Chongqing 400038 ,","institution_ids":["https://openalex.org/I151075929","https://openalex.org/I4210117763"]},{"raw_affiliation_string":"Department of Thoracic Surgery , Xinqiao Hospital, , Chongqing 400038 ,","institution_ids":["https://openalex.org/I4210117763"]}]},{"author_position":"middle","author":{"id":"https://openalex.org/A5111032767","display_name":"Mingming Xiao","orcid":null},"institutions":[{"id":"https://openalex.org/I4210105835","display_name":"Liaoning Provincial People's Hospital","ror":"https://ror.org/01n3v7c44","country_code":"CN","type":"healthcare","lineage":["https://openalex.org/I4210105835"]},{"id":"https://openalex.org/I91656880","display_name":"China Medical University","ror":"https://ror.org/032d4f246","country_code":"CN","type":"education","lineage":["https://openalex.org/I91656880"]}],"countries":["CN"],"is_corresponding":false,"raw_author_name":"Mingming Xiao","raw_affiliation_strings":["Department of Pathology, People\u2019s Hospital of China Medical University (Liaoning Provincial People\u2019s Hospital) , Shenyang, Liaoning Province 110015 ,"],"raw_orcid":null,"affiliations":[{"raw_affiliation_string":"Department of Pathology, People\u2019s Hospital of China Medical University (Liaoning Provincial People\u2019s Hospital) , Shenyang, Liaoning Province 110015 ,","institution_ids":["https://openalex.org/I4210105835","https://openalex.org/I91656880"]}]},{"author_position":"middle","author":{"id":"https://openalex.org/A5100725035","display_name":"Boyang Wang","orcid":"https://orcid.org/0000-0001-8973-2328"},"institutions":[{"id":"https://openalex.org/I39422238","display_name":"University of Illinois Chicago","ror":"https://ror.org/02mpq6x41","country_code":"US","type":"education","lineage":["https://openalex.org/I39422238"]}],"countries":["US"],"is_corresponding":false,"raw_author_name":"Boyang Wang","raw_affiliation_strings":["Electrical and Computer Engineering, University of Illinois at Chicago , Chicago, IL 60607 ,"],"raw_orcid":null,"affiliations":[{"raw_affiliation_string":"Electrical and Computer Engineering, University of Illinois at Chicago , Chicago, IL 60607 ,","institution_ids":["https://openalex.org/I39422238"]}]},{"author_position":"middle","author":{"id":"https://openalex.org/A5017004315","display_name":"Tianyu Liu","orcid":"https://orcid.org/0000-0002-9412-6573"},"institutions":[{"id":"https://openalex.org/I103635307","display_name":"University of California, Riverside","ror":"https://ror.org/03nawhv43","country_code":"US","type":"education","lineage":["https://openalex.org/I103635307"]}],"countries":["US"],"is_corresponding":false,"raw_author_name":"Tianyu Liu","raw_affiliation_strings":["Computer Science and Engineering, University of California , Riverside, Riverside, CA 92521 ,"],"raw_orcid":null,"affiliations":[{"raw_affiliation_string":"Computer Science and Engineering, University of California , Riverside, Riverside, CA 92521 ,","institution_ids":["https://openalex.org/I103635307"]}]},{"author_position":"last","author":{"id":"https://openalex.org/A5060002954","display_name":"Xiangyu Sun","orcid":"https://orcid.org/0000-0002-3417-9323"},"institutions":[{"id":"https://openalex.org/I27357992","display_name":"Dalian University of Technology","ror":"https://ror.org/023hj5876","country_code":"CN","type":"education","lineage":["https://openalex.org/I27357992"]},{"id":"https://openalex.org/I4210161255","display_name":"Liaoning Cancer Hospital & Institute","ror":"https://ror.org/05d659s21","country_code":"CN","type":"healthcare","lineage":["https://openalex.org/I4210161255"]},{"id":"https://openalex.org/I91656880","display_name":"China Medical University","ror":"https://ror.org/032d4f246","country_code":"CN","type":"education","lineage":["https://openalex.org/I91656880"]}],"countries":["CN"],"is_corresponding":false,"raw_author_name":"Xiangyu Sun","raw_affiliation_strings":["Cancer Hospital of China Medical University, Liaoning Cancer Hospital and Institute , Shenyang 110042, Liaoning ,","Cancer Hospital of Dalian University of Technology , Shenyang, Liaoning Province 110042 ,"],"raw_orcid":null,"affiliations":[{"raw_affiliation_string":"Cancer Hospital of China Medical University, Liaoning Cancer Hospital and Institute , Shenyang 110042, Liaoning ,","institution_ids":["https://openalex.org/I4210161255","https://openalex.org/I91656880"]},{"raw_affiliation_string":"Cancer Hospital of Dalian University of Technology , Shenyang, Liaoning Province 110042 ,","institution_ids":["https://openalex.org/I27357992"]}]}],"institutions":[],"countries_distinct_count":2,"institutions_distinct_count":11,"corresponding_author_ids":[],"corresponding_institution_ids":[],"apc_list":{"value":4011,"currency":"USD","value_usd":4011},"apc_paid":{"value":4011,"currency":"USD","value_usd":4011},"fwci":0.6585,"has_fulltext":true,"cited_by_count":4,"citation_normalized_percentile":{"value":0.6695583,"is_in_top_1_percent":false,"is_in_top_10_percent":false},"cited_by_percentile_year":{"min":95,"max":98},"biblio":{"volume":"25","issue":"6","first_page":null,"last_page":null},"is_retracted":false,"is_paratext":false,"is_xpac":false,"primary_topic":{"id":"https://openalex.org/T11289","display_name":"Single-cell and spatial transcriptomics","score":0.9998999834060669,"subfield":{"id":"https://openalex.org/subfields/1312","display_name":"Molecular Biology"},"field":{"id":"https://openalex.org/fields/13","display_name":"Biochemistry, Genetics and Molecular Biology"},"domain":{"id":"https://openalex.org/domains/1","display_name":"Life Sciences"}},"topics":[{"id":"https://openalex.org/T11289","display_name":"Single-cell and spatial transcriptomics","score":0.9998999834060669,"subfield":{"id":"https://openalex.org/subfields/1312","display_name":"Molecular Biology"},"field":{"id":"https://openalex.org/fields/13","display_name":"Biochemistry, Genetics and Molecular Biology"},"domain":{"id":"https://openalex.org/domains/1","display_name":"Life Sciences"}},{"id":"https://openalex.org/T12859","display_name":"Cell Image Analysis Techniques","score":0.9883999824523926,"subfield":{"id":"https://openalex.org/subfields/1304","display_name":"Biophysics"},"field":{"id":"https://openalex.org/fields/13","display_name":"Biochemistry, Genetics and Molecular Biology"},"domain":{"id":"https://openalex.org/domains/1","display_name":"Life Sciences"}},{"id":"https://openalex.org/T12015","display_name":"Photoacoustic and Ultrasonic Imaging","score":0.9574000239372253,"subfield":{"id":"https://openalex.org/subfields/2204","display_name":"Biomedical Engineering"},"field":{"id":"https://openalex.org/fields/22","display_name":"Engineering"},"domain":{"id":"https://openalex.org/domains/3","display_name":"Physical Sciences"}}],"keywords":[{"id":"https://openalex.org/keywords/cluster-analysis","display_name":"Cluster analysis","score":0.7783794403076172},{"id":"https://openalex.org/keywords/computer-science","display_name":"Computer science","score":0.7434732913970947},{"id":"https://openalex.org/keywords/modal","display_name":"Modal","score":0.6221916675567627},{"id":"https://openalex.org/keywords/data-mining","display_name":"Data mining","score":0.6128379106521606},{"id":"https://openalex.org/keywords/aggregate","display_name":"Aggregate (composite)","score":0.5062071681022644},{"id":"https://openalex.org/keywords/artificial-intelligence","display_name":"Artificial intelligence","score":0.4745524525642395},{"id":"https://openalex.org/keywords/consistency","display_name":"Consistency (knowledge bases)","score":0.4710804224014282},{"id":"https://openalex.org/keywords/similarity","display_name":"Similarity (geometry)","score":0.4273131787776947},{"id":"https://openalex.org/keywords/data-integration","display_name":"Data integration","score":0.41357776522636414},{"id":"https://openalex.org/keywords/rank","display_name":"Rank (graph theory)","score":0.41357290744781494},{"id":"https://openalex.org/keywords/machine-learning","display_name":"Machine learning","score":0.39625000953674316},{"id":"https://openalex.org/keywords/mathematics","display_name":"Mathematics","score":0.11267298460006714}],"concepts":[{"id":"https://openalex.org/C73555534","wikidata":"https://www.wikidata.org/wiki/Q622825","display_name":"Cluster analysis","level":2,"score":0.7783794403076172},{"id":"https://openalex.org/C41008148","wikidata":"https://www.wikidata.org/wiki/Q21198","display_name":"Computer science","level":0,"score":0.7434732913970947},{"id":"https://openalex.org/C71139939","wikidata":"https://www.wikidata.org/wiki/Q910194","display_name":"Modal","level":2,"score":0.6221916675567627},{"id":"https://openalex.org/C124101348","wikidata":"https://www.wikidata.org/wiki/Q172491","display_name":"Data mining","level":1,"score":0.6128379106521606},{"id":"https://openalex.org/C4679612","wikidata":"https://www.wikidata.org/wiki/Q866298","display_name":"Aggregate (composite)","level":2,"score":0.5062071681022644},{"id":"https://openalex.org/C154945302","wikidata":"https://www.wikidata.org/wiki/Q11660","display_name":"Artificial intelligence","level":1,"score":0.4745524525642395},{"id":"https://openalex.org/C2776436953","wikidata":"https://www.wikidata.org/wiki/Q5163215","display_name":"Consistency (knowledge bases)","level":2,"score":0.4710804224014282},{"id":"https://openalex.org/C103278499","wikidata":"https://www.wikidata.org/wiki/Q254465","display_name":"Similarity (geometry)","level":3,"score":0.4273131787776947},{"id":"https://openalex.org/C72634772","wikidata":"https://www.wikidata.org/wiki/Q386824","display_name":"Data integration","level":2,"score":0.41357776522636414},{"id":"https://openalex.org/C164226766","wikidata":"https://www.wikidata.org/wiki/Q7293202","display_name":"Rank (graph theory)","level":2,"score":0.41357290744781494},{"id":"https://openalex.org/C119857082","wikidata":"https://www.wikidata.org/wiki/Q2539","display_name":"Machine learning","level":1,"score":0.39625000953674316},{"id":"https://openalex.org/C33923547","wikidata":"https://www.wikidata.org/wiki/Q395","display_name":"Mathematics","level":0,"score":0.11267298460006714},{"id":"https://openalex.org/C192562407","wikidata":"https://www.wikidata.org/wiki/Q228736","display_name":"Materials science","level":0,"score":0.0},{"id":"https://openalex.org/C115961682","wikidata":"https://www.wikidata.org/wiki/Q860623","display_name":"Image (mathematics)","level":2,"score":0.0},{"id":"https://openalex.org/C188027245","wikidata":"https://www.wikidata.org/wiki/Q750446","display_name":"Polymer chemistry","level":1,"score":0.0},{"id":"https://openalex.org/C159985019","wikidata":"https://www.wikidata.org/wiki/Q181790","display_name":"Composite material","level":1,"score":0.0},{"id":"https://openalex.org/C114614502","wikidata":"https://www.wikidata.org/wiki/Q76592","display_name":"Combinatorics","level":1,"score":0.0},{"id":"https://openalex.org/C185592680","wikidata":"https://www.wikidata.org/wiki/Q2329","display_name":"Chemistry","level":0,"score":0.0}],"mesh":[{"descriptor_ui":"D000465","descriptor_name":"Algorithms","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D000465","descriptor_name":"Algorithms","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D000465","descriptor_name":"Algorithms","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D000465","descriptor_name":"Algorithms","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D006801","descriptor_name":"Humans","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D006801","descriptor_name":"Humans","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D006801","descriptor_name":"Humans","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D006801","descriptor_name":"Humans","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D016000","descriptor_name":"Cluster Analysis","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D016000","descriptor_name":"Cluster Analysis","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D016000","descriptor_name":"Cluster Analysis","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D016000","descriptor_name":"Cluster Analysis","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D019295","descriptor_name":"Computational Biology","qualifier_ui":"Q000379","qualifier_name":"methods","is_major_topic":false},{"descriptor_ui":"D019295","descriptor_name":"Computational Biology","qualifier_ui":"Q000379","qualifier_name":"methods","is_major_topic":false},{"descriptor_ui":"D019295","descriptor_name":"Computational Biology","qualifier_ui":"Q000379","qualifier_name":"methods","is_major_topic":false},{"descriptor_ui":"D019295","descriptor_name":"Computational Biology","qualifier_ui":"Q000379","qualifier_name":"methods","is_major_topic":false},{"descriptor_ui":"D059010","descriptor_name":"Single-Cell Analysis","qualifier_ui":"Q000379","qualifier_name":"methods","is_major_topic":true},{"descriptor_ui":"D059010","descriptor_name":"Single-Cell Analysis","qualifier_ui":"Q000379","qualifier_name":"methods","is_major_topic":true},{"descriptor_ui":"D059010","descriptor_name":"Single-Cell Analysis","qualifier_ui":"Q000379","qualifier_name":"methods","is_major_topic":true},{"descriptor_ui":"D059010","descriptor_name":"Single-Cell Analysis","qualifier_ui":"Q000379","qualifier_name":"methods","is_major_topic":true},{"descriptor_ui":"D059016","descriptor_name":"Tumor Microenvironment","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D059016","descriptor_name":"Tumor Microenvironment","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D059016","descriptor_name":"Tumor Microenvironment","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D059016","descriptor_name":"Tumor Microenvironment","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false}],"locations_count":3,"locations":[{"id":"doi:10.1093/bib/bbae485","is_oa":true,"landing_page_url":"https://doi.org/10.1093/bib/bbae485","pdf_url":"https://academic.oup.com/bib/article-pdf/25/6/bbae485/59465194/bbae485.pdf","source":{"id":"https://openalex.org/S91767247","display_name":"Briefings in Bioinformatics","issn_l":"1467-5463","issn":["1467-5463","1477-4054"],"is_oa":true,"is_in_doaj":true,"is_core":true,"host_organization":"https://openalex.org/P4310311648","host_organization_name":"Oxford University Press","host_organization_lineage":["https://openalex.org/P4310311648","https://openalex.org/P4310311647"],"host_organization_lineage_names":["Oxford University Press","University of Oxford"],"type":"journal"},"license":"cc-by","license_id":"https://openalex.org/licenses/cc-by","version":"publishedVersion","is_accepted":true,"is_published":true,"raw_source_name":"Briefings in Bioinformatics","raw_type":"journal-article"},{"id":"pmid:39356327","is_oa":false,"landing_page_url":"https://pubmed.ncbi.nlm.nih.gov/39356327","pdf_url":null,"source":{"id":"https://openalex.org/S4306525036","display_name":"PubMed","issn_l":null,"issn":null,"is_oa":false,"is_in_doaj":false,"is_core":false,"host_organization":"https://openalex.org/I1299303238","host_organization_name":"National Institutes of Health","host_organization_lineage":["https://openalex.org/I1299303238"],"host_organization_lineage_names":[],"type":"repository"},"license":null,"license_id":null,"version":"publishedVersion","is_accepted":true,"is_published":true,"raw_source_name":"Briefings in bioinformatics","raw_type":null},{"id":"pmh:oai:pubmedcentral.nih.gov:11445907","is_oa":true,"landing_page_url":"https://www.ncbi.nlm.nih.gov/pmc/articles/11445907","pdf_url":"https://pmc.ncbi.nlm.nih.gov/articles/PMC11445907/pdf/bbae485.pdf","source":{"id":"https://openalex.org/S2764455111","display_name":"PubMed Central","issn_l":null,"issn":null,"is_oa":true,"is_in_doaj":false,"is_core":false,"host_organization":"https://openalex.org/I1299303238","host_organization_name":"National Institutes of Health","host_organization_lineage":["https://openalex.org/I1299303238"],"host_organization_lineage_names":[],"type":"repository"},"license":"cc-by","license_id":"https://openalex.org/licenses/cc-by","version":"submittedVersion","is_accepted":false,"is_published":false,"raw_source_name":"Brief Bioinform","raw_type":"Text"}],"best_oa_location":{"id":"doi:10.1093/bib/bbae485","is_oa":true,"landing_page_url":"https://doi.org/10.1093/bib/bbae485","pdf_url":"https://academic.oup.com/bib/article-pdf/25/6/bbae485/59465194/bbae485.pdf","source":{"id":"https://openalex.org/S91767247","display_name":"Briefings in Bioinformatics","issn_l":"1467-5463","issn":["1467-5463","1477-4054"],"is_oa":true,"is_in_doaj":true,"is_core":true,"host_organization":"https://openalex.org/P4310311648","host_organization_name":"Oxford University Press","host_organization_lineage":["https://openalex.org/P4310311648","https://openalex.org/P4310311647"],"host_organization_lineage_names":["Oxford University Press","University of Oxford"],"type":"journal"},"license":"cc-by","license_id":"https://openalex.org/licenses/cc-by","version":"publishedVersion","is_accepted":true,"is_published":true,"raw_source_name":"Briefings in Bioinformatics","raw_type":"journal-article"},"sustainable_development_goals":[{"display_name":"Partnerships for the goals","id":"https://metadata.un.org/sdg/17","score":0.4699999988079071}],"awards":[{"id":"https://openalex.org/G6442053858","display_name":null,"funder_award_id":"82403430","funder_id":"https://openalex.org/F4320321001","funder_display_name":"National Natural Science Foundation of China"}],"funders":[{"id":"https://openalex.org/F4320321001","display_name":"National Natural Science Foundation of China","ror":"https://ror.org/01h0zpd94"}],"has_content":{"grobid_xml":false,"pdf":true},"content_urls":{"pdf":"https://content.openalex.org/works/W4403084512.pdf"},"referenced_works_count":50,"referenced_works":["https://openalex.org/W1813068103","https://openalex.org/W1990523483","https://openalex.org/W2033178790","https://openalex.org/W2132914434","https://openalex.org/W2133811295","https://openalex.org/W2299467264","https://openalex.org/W2579597427","https://openalex.org/W2598326928","https://openalex.org/W2792693509","https://openalex.org/W2899348912","https://openalex.org/W2907783748","https://openalex.org/W2937917790","https://openalex.org/W2951381561","https://openalex.org/W2953151710","https://openalex.org/W2953322088","https://openalex.org/W2955621471","https://openalex.org/W3021272327","https://openalex.org/W3037216933","https://openalex.org/W3094562954","https://openalex.org/W3102434595","https://openalex.org/W3136737181","https://openalex.org/W3156184139","https://openalex.org/W3164736847","https://openalex.org/W3198628780","https://openalex.org/W3216323060","https://openalex.org/W4206190452","https://openalex.org/W4213136259","https://openalex.org/W4231157025","https://openalex.org/W4315926876","https://openalex.org/W4316340001","https://openalex.org/W4323357155","https://openalex.org/W4366462798","https://openalex.org/W4372352552","https://openalex.org/W4378716051","https://openalex.org/W4379599555","https://openalex.org/W4382239909","https://openalex.org/W4384405873","https://openalex.org/W4385163943","https://openalex.org/W4386316597","https://openalex.org/W4386826409","https://openalex.org/W4388089837","https://openalex.org/W4388965150","https://openalex.org/W4389134031","https://openalex.org/W4391167460","https://openalex.org/W4392899363","https://openalex.org/W4393252672","https://openalex.org/W4394011009","https://openalex.org/W4396878042","https://openalex.org/W6678914141","https://openalex.org/W6731811539"],"related_works":["https://openalex.org/W2485872624","https://openalex.org/W1603736412","https://openalex.org/W2112835755","https://openalex.org/W4291951920","https://openalex.org/W2349674371","https://openalex.org/W2097495471","https://openalex.org/W1696545756","https://openalex.org/W2023578311","https://openalex.org/W2379392295","https://openalex.org/W2155094138"],"abstract_inverted_index":{"Single-cell":[0],"cross-modal":[1,77,153],"joint":[2],"clustering":[3,20,43,60,189],"has":[4],"been":[5,17],"extensively":[6],"utilized":[7],"to":[8,36,71,92,159],"investigate":[9],"the":[10,22,26,67,75,93,108,115,138,143,167],"tumor":[11],"microenvironment.":[12],"Although":[13],"numerous":[14,32],"approaches":[15],"have":[16,123,181],"suggested,":[18],"accurate":[19],"remains":[21],"main":[23],"challenge.":[24],"First,":[25],"gene":[27],"expression":[28],"matrix":[29,145],"frequently":[30],"contains":[31],"missing":[33],"values":[34],"due":[35],"measurement":[37],"limitations.":[38],"The":[39],"majority":[40],"of":[41,85,95,170],"existing":[42,76],"methods":[44,56],"treat":[45],"it":[46],"as":[47],"a":[48,125],"typical":[49],"multi-modal":[50,179],"dataset":[51],"without":[52],"further":[53],"processing.":[54],"Few":[55],"conduct":[57],"recovery":[58],"before":[59],"and":[61,113,146,155],"do":[62],"not":[63,82],"sufficiently":[64],"engage":[65],"with":[66,163],"underlying":[68],"research,":[69],"leading":[70,91],"suboptimal":[72],"outcomes.":[73],"Additionally,":[74],"information":[78],"fusion":[79],"strategy":[80,112],"does":[81],"ensure":[83],"consistency":[84],"representations":[86,162],"across":[87],"different":[88],"modes,":[89],"potentially":[90],"integration":[94,169],"conflicting":[96],"information,":[97],"which":[98],"could":[99],"degrade":[100],"performance.":[101],"To":[102],"address":[103],"these":[104],"challenges,":[105],"we":[106,122,151],"propose":[107],"'Recover":[109],"then":[110],"Aggregate'":[111],"introduce":[114],"Unified":[116],"Cross-Modal":[117],"Deep":[118],"Clustering":[119],"model.":[120],"Specifically,":[121],"developed":[124],"data":[126],"augmentation":[127],"technique":[128],"based":[129],"on":[130,137,176],"neighborhood":[131],"similarity,":[132],"iteratively":[133],"imposing":[134],"rank":[135],"constraints":[136],"Laplacian":[139],"matrix,":[140],"thus":[141],"updating":[142],"similarity":[144],"recovering":[147],"dropout":[148],"events.":[149],"Concurrently,":[150],"integrate":[152],"features":[154],"employ":[156],"contrastive":[157],"learning":[158],"align":[160],"modality-specific":[161],"consistent":[164],"ones,":[165],"enhancing":[166],"effective":[168],"diverse":[171],"modal":[172],"information.":[173],"Comprehensive":[174],"experiments":[175],"five":[177],"real-world":[178],"datasets":[180],"demonstrated":[182],"this":[183],"method's":[184],"superior":[185],"effectiveness":[186],"in":[187],"single-cell":[188],"tasks.":[190]},"counts_by_year":[{"year":2026,"cited_by_count":2},{"year":2025,"cited_by_count":2}],"updated_date":"2026-07-22T07:51:19.307946","created_date":"2025-10-10T00:00:00"}
