{"id":"https://openalex.org/W4403240373","doi":"https://doi.org/10.1093/bib/bbae478","title":"NIGMS Sandbox: a learning platform toward democratizing cloud computing for biomedical research","display_name":"NIGMS Sandbox: a learning platform toward democratizing cloud computing for biomedical research","publication_year":2024,"publication_date":"2024-07-01","ids":{"openalex":"https://openalex.org/W4403240373","doi":"https://doi.org/10.1093/bib/bbae478","pmid":"https://pubmed.ncbi.nlm.nih.gov/39376084"},"language":"en","primary_location":{"id":"doi:10.1093/bib/bbae478","is_oa":true,"landing_page_url":"https://doi.org/10.1093/bib/bbae478","pdf_url":"https://academic.oup.com/bib/article-pdf/25/Supplement_1/bbae478/59633757/bbae478.pdf","source":{"id":"https://openalex.org/S91767247","display_name":"Briefings in Bioinformatics","issn_l":"1467-5463","issn":["1467-5463","1477-4054"],"is_oa":true,"is_in_doaj":true,"is_core":true,"host_organization":"https://openalex.org/P4310311648","host_organization_name":"Oxford University Press","host_organization_lineage":["https://openalex.org/P4310311648","https://openalex.org/P4310311647"],"host_organization_lineage_names":["Oxford University Press","University of Oxford"],"type":"journal"},"license":"public-domain","license_id":"https://openalex.org/licenses/public-domain","version":"publishedVersion","is_accepted":true,"is_published":true,"raw_source_name":"Briefings in Bioinformatics","raw_type":"journal-article"},"type":"article","indexed_in":["crossref","doaj","pubmed"],"open_access":{"is_oa":true,"oa_status":"gold","oa_url":"https://academic.oup.com/bib/article-pdf/25/Supplement_1/bbae478/59633757/bbae478.pdf","any_repository_has_fulltext":true},"authorships":[{"author_position":"first","author":{"id":"https://openalex.org/A5115597901","display_name":"Ming Lei","orcid":"https://orcid.org/0009-0001-6134-9551"},"institutions":[{"id":"https://openalex.org/I1299303238","display_name":"National Institutes of Health","ror":"https://ror.org/01cwqze88","country_code":"US","type":"government","lineage":["https://openalex.org/I1299022934","https://openalex.org/I1299303238"]},{"id":"https://openalex.org/I4210152124","display_name":"National Institute of General Medical Sciences","ror":"https://ror.org/04q48ey07","country_code":"US","type":"facility","lineage":["https://openalex.org/I1299022934","https://openalex.org/I1299303238","https://openalex.org/I4210152124"]}],"countries":["US"],"is_corresponding":true,"raw_author_name":"Ming Lei","raw_affiliation_strings":["National Institute of General Medical Sciences, National Institutes of Health , 9000 Rockville Pike, Bethesda, Marylnd 20892,"],"raw_orcid":"https://orcid.org/0009-0001-6134-9551","affiliations":[{"raw_affiliation_string":"National Institute of General Medical Sciences, National Institutes of Health , 9000 Rockville Pike, Bethesda, Marylnd 20892,","institution_ids":["https://openalex.org/I4210152124","https://openalex.org/I1299303238"]}]},{"author_position":"middle","author":{"id":"https://openalex.org/A5057242692","display_name":"Lakshmi K. Matukumalli","orcid":null},"institutions":[{"id":"https://openalex.org/I1299303238","display_name":"National Institutes of Health","ror":"https://ror.org/01cwqze88","country_code":"US","type":"government","lineage":["https://openalex.org/I1299022934","https://openalex.org/I1299303238"]},{"id":"https://openalex.org/I4210152124","display_name":"National Institute of General Medical Sciences","ror":"https://ror.org/04q48ey07","country_code":"US","type":"facility","lineage":["https://openalex.org/I1299022934","https://openalex.org/I1299303238","https://openalex.org/I4210152124"]}],"countries":["US"],"is_corresponding":false,"raw_author_name":"Lakshmi K Matukumalli","raw_affiliation_strings":["National Institute of General Medical Sciences, National Institutes of Health , 9000 Rockville Pike, Bethesda, Marylnd 20892,"],"raw_orcid":null,"affiliations":[{"raw_affiliation_string":"National Institute of General Medical Sciences, National Institutes of Health , 9000 Rockville Pike, Bethesda, Marylnd 20892,","institution_ids":["https://openalex.org/I4210152124","https://openalex.org/I1299303238"]}]},{"author_position":"middle","author":{"id":"https://openalex.org/A5109923192","display_name":"Krishan Arora","orcid":null},"institutions":[{"id":"https://openalex.org/I1299303238","display_name":"National Institutes of Health","ror":"https://ror.org/01cwqze88","country_code":"US","type":"government","lineage":["https://openalex.org/I1299022934","https://openalex.org/I1299303238"]},{"id":"https://openalex.org/I4210152124","display_name":"National Institute of General Medical Sciences","ror":"https://ror.org/04q48ey07","country_code":"US","type":"facility","lineage":["https://openalex.org/I1299022934","https://openalex.org/I1299303238","https://openalex.org/I4210152124"]}],"countries":["US"],"is_corresponding":false,"raw_author_name":"Krishan Arora","raw_affiliation_strings":["National Institute of General Medical Sciences, National Institutes of Health , 9000 Rockville Pike, Bethesda, Marylnd 20892,"],"raw_orcid":null,"affiliations":[{"raw_affiliation_string":"National Institute of General Medical Sciences, National Institutes of Health , 9000 Rockville Pike, Bethesda, Marylnd 20892,","institution_ids":["https://openalex.org/I4210152124","https://openalex.org/I1299303238"]}]},{"author_position":"middle","author":{"id":"https://openalex.org/A5059931372","display_name":"Nick Weber","orcid":null},"institutions":[{"id":"https://openalex.org/I1299303238","display_name":"National Institutes of Health","ror":"https://ror.org/01cwqze88","country_code":"US","type":"government","lineage":["https://openalex.org/I1299022934","https://openalex.org/I1299303238"]},{"id":"https://openalex.org/I29955533","display_name":"Center for Information Technology","ror":"https://ror.org/03jh5a977","country_code":"US","type":"facility","lineage":["https://openalex.org/I1299022934","https://openalex.org/I1299303238","https://openalex.org/I29955533"]}],"countries":["US"],"is_corresponding":false,"raw_author_name":"Nick Weber","raw_affiliation_strings":["Center for Information Technology, National Institutes of Health , 9000 Rockville Pike, Bethesda, Marylnd 20892,"],"raw_orcid":null,"affiliations":[{"raw_affiliation_string":"Center for Information Technology, National Institutes of Health , 9000 Rockville Pike, Bethesda, Marylnd 20892,","institution_ids":["https://openalex.org/I29955533","https://openalex.org/I1299303238"]}]},{"author_position":"middle","author":{"id":"https://openalex.org/A5108166380","display_name":"Rachel Malashock","orcid":null},"institutions":[{"id":"https://openalex.org/I1299303238","display_name":"National Institutes of Health","ror":"https://ror.org/01cwqze88","country_code":"US","type":"government","lineage":["https://openalex.org/I1299022934","https://openalex.org/I1299303238"]},{"id":"https://openalex.org/I29955533","display_name":"Center for Information Technology","ror":"https://ror.org/03jh5a977","country_code":"US","type":"facility","lineage":["https://openalex.org/I1299022934","https://openalex.org/I1299303238","https://openalex.org/I29955533"]}],"countries":["US"],"is_corresponding":false,"raw_author_name":"Rachel Malashock","raw_affiliation_strings":["Center for Information Technology, National Institutes of Health , 9000 Rockville Pike, Bethesda, Marylnd 20892,"],"raw_orcid":null,"affiliations":[{"raw_affiliation_string":"Center for Information Technology, National Institutes of Health , 9000 Rockville Pike, Bethesda, Marylnd 20892,","institution_ids":["https://openalex.org/I29955533","https://openalex.org/I1299303238"]}]},{"author_position":"middle","author":{"id":"https://openalex.org/A5110127468","display_name":"Fenglou Mao","orcid":null},"institutions":[{"id":"https://openalex.org/I1299303238","display_name":"National Institutes of Health","ror":"https://ror.org/01cwqze88","country_code":"US","type":"government","lineage":["https://openalex.org/I1299022934","https://openalex.org/I1299303238"]}],"countries":["US"],"is_corresponding":false,"raw_author_name":"Fenglou Mao","raw_affiliation_strings":["Office of Data Science Strategy, Office of Director; National Institutes of Health , 9000 Rockville Pike, Bethesda, Marylnd 20892,"],"raw_orcid":null,"affiliations":[{"raw_affiliation_string":"Office of Data Science Strategy, Office of Director; National Institutes of Health , 9000 Rockville Pike, Bethesda, Marylnd 20892,","institution_ids":["https://openalex.org/I1299303238"]}]},{"author_position":"middle","author":{"id":"https://openalex.org/A5030050236","display_name":"Susan Gregurick","orcid":null},"institutions":[{"id":"https://openalex.org/I1299303238","display_name":"National Institutes of Health","ror":"https://ror.org/01cwqze88","country_code":"US","type":"government","lineage":["https://openalex.org/I1299022934","https://openalex.org/I1299303238"]}],"countries":["US"],"is_corresponding":false,"raw_author_name":"Susan Gregurick","raw_affiliation_strings":["Office of Data Science Strategy, Office of Director; National Institutes of Health , 9000 Rockville Pike, Bethesda, Marylnd 20892,"],"raw_orcid":null,"affiliations":[{"raw_affiliation_string":"Office of Data Science Strategy, Office of Director; National Institutes of Health , 9000 Rockville Pike, Bethesda, Marylnd 20892,","institution_ids":["https://openalex.org/I1299303238"]}]},{"author_position":"last","author":{"id":"https://openalex.org/A5059939534","display_name":"Jon R. Lorsch","orcid":"https://orcid.org/0000-0002-4521-4999"},"institutions":[{"id":"https://openalex.org/I1299303238","display_name":"National Institutes of Health","ror":"https://ror.org/01cwqze88","country_code":"US","type":"government","lineage":["https://openalex.org/I1299022934","https://openalex.org/I1299303238"]},{"id":"https://openalex.org/I4210152124","display_name":"National Institute of General Medical Sciences","ror":"https://ror.org/04q48ey07","country_code":"US","type":"facility","lineage":["https://openalex.org/I1299022934","https://openalex.org/I1299303238","https://openalex.org/I4210152124"]}],"countries":["US"],"is_corresponding":false,"raw_author_name":"Jon Lorsch","raw_affiliation_strings":["National Institute of General Medical Sciences, National Institutes of Health , 9000 Rockville Pike, Bethesda, Marylnd 20892,"],"raw_orcid":null,"affiliations":[{"raw_affiliation_string":"National Institute of General Medical Sciences, National Institutes of Health , 9000 Rockville Pike, Bethesda, Marylnd 20892,","institution_ids":["https://openalex.org/I4210152124","https://openalex.org/I1299303238"]}]}],"institutions":[],"countries_distinct_count":1,"institutions_distinct_count":8,"corresponding_author_ids":["https://openalex.org/A5115597901"],"corresponding_institution_ids":["https://openalex.org/I1299303238","https://openalex.org/I4210152124"],"apc_list":{"value":4011,"currency":"USD","value_usd":4011},"apc_paid":{"value":4011,"currency":"USD","value_usd":4011},"fwci":9.896,"has_fulltext":true,"cited_by_count":10,"citation_normalized_percentile":{"value":0.97777327,"is_in_top_1_percent":false,"is_in_top_10_percent":true},"cited_by_percentile_year":{"min":91,"max":99},"biblio":{"volume":"25","issue":"Supplement_1","first_page":null,"last_page":null},"is_retracted":false,"is_paratext":false,"is_xpac":false,"primary_topic":{"id":"https://openalex.org/T11986","display_name":"Scientific Computing and Data Management","score":0.9968000054359436,"subfield":{"id":"https://openalex.org/subfields/1802","display_name":"Information Systems and Management"},"field":{"id":"https://openalex.org/fields/18","display_name":"Decision Sciences"},"domain":{"id":"https://openalex.org/domains/2","display_name":"Social Sciences"}},"topics":[{"id":"https://openalex.org/T11986","display_name":"Scientific Computing and Data Management","score":0.9968000054359436,"subfield":{"id":"https://openalex.org/subfields/1802","display_name":"Information Systems and Management"},"field":{"id":"https://openalex.org/fields/18","display_name":"Decision Sciences"},"domain":{"id":"https://openalex.org/domains/2","display_name":"Social Sciences"}},{"id":"https://openalex.org/T11937","display_name":"Research Data Management Practices","score":0.9955999851226807,"subfield":{"id":"https://openalex.org/subfields/1710","display_name":"Information Systems"},"field":{"id":"https://openalex.org/fields/17","display_name":"Computer Science"},"domain":{"id":"https://openalex.org/domains/3","display_name":"Physical Sciences"}},{"id":"https://openalex.org/T13937","display_name":"Genetics, Bioinformatics, and Biomedical Research","score":0.9918000102043152,"subfield":{"id":"https://openalex.org/subfields/1312","display_name":"Molecular Biology"},"field":{"id":"https://openalex.org/fields/13","display_name":"Biochemistry, Genetics and Molecular Biology"},"domain":{"id":"https://openalex.org/domains/1","display_name":"Life Sciences"}}],"keywords":[{"id":"https://openalex.org/keywords/sandbox","display_name":"Sandbox (software development)","score":0.9000797271728516},{"id":"https://openalex.org/keywords/staffing","display_name":"Staffing","score":0.7247992753982544},{"id":"https://openalex.org/keywords/big-data","display_name":"Big data","score":0.6975721120834351},{"id":"https://openalex.org/keywords/cloud-computing","display_name":"Cloud computing","score":0.6754763722419739},{"id":"https://openalex.org/keywords/computer-science","display_name":"Computer science","score":0.66746586561203},{"id":"https://openalex.org/keywords/data-science","display_name":"Data science","score":0.6312927007675171},{"id":"https://openalex.org/keywords/workforce","display_name":"Workforce","score":0.5137442350387573},{"id":"https://openalex.org/keywords/component","display_name":"Component (thermodynamics)","score":0.50522381067276},{"id":"https://openalex.org/keywords/world-wide-web","display_name":"World Wide Web","score":0.32134145498275757},{"id":"https://openalex.org/keywords/political-science","display_name":"Political science","score":0.1484876275062561},{"id":"https://openalex.org/keywords/software-engineering","display_name":"Software engineering","score":0.1063494086265564},{"id":"https://openalex.org/keywords/data-mining","display_name":"Data mining","score":0.09018969535827637}],"concepts":[{"id":"https://openalex.org/C167981075","wikidata":"https://www.wikidata.org/wiki/Q2667186","display_name":"Sandbox (software development)","level":2,"score":0.9000797271728516},{"id":"https://openalex.org/C2777512617","wikidata":"https://www.wikidata.org/wiki/Q1783605","display_name":"Staffing","level":2,"score":0.7247992753982544},{"id":"https://openalex.org/C75684735","wikidata":"https://www.wikidata.org/wiki/Q858810","display_name":"Big data","level":2,"score":0.6975721120834351},{"id":"https://openalex.org/C79974875","wikidata":"https://www.wikidata.org/wiki/Q483639","display_name":"Cloud computing","level":2,"score":0.6754763722419739},{"id":"https://openalex.org/C41008148","wikidata":"https://www.wikidata.org/wiki/Q21198","display_name":"Computer science","level":0,"score":0.66746586561203},{"id":"https://openalex.org/C2522767166","wikidata":"https://www.wikidata.org/wiki/Q2374463","display_name":"Data science","level":1,"score":0.6312927007675171},{"id":"https://openalex.org/C2778139618","wikidata":"https://www.wikidata.org/wiki/Q13440398","display_name":"Workforce","level":2,"score":0.5137442350387573},{"id":"https://openalex.org/C168167062","wikidata":"https://www.wikidata.org/wiki/Q1117970","display_name":"Component (thermodynamics)","level":2,"score":0.50522381067276},{"id":"https://openalex.org/C136764020","wikidata":"https://www.wikidata.org/wiki/Q466","display_name":"World Wide Web","level":1,"score":0.32134145498275757},{"id":"https://openalex.org/C17744445","wikidata":"https://www.wikidata.org/wiki/Q36442","display_name":"Political science","level":0,"score":0.1484876275062561},{"id":"https://openalex.org/C115903868","wikidata":"https://www.wikidata.org/wiki/Q80993","display_name":"Software engineering","level":1,"score":0.1063494086265564},{"id":"https://openalex.org/C124101348","wikidata":"https://www.wikidata.org/wiki/Q172491","display_name":"Data mining","level":1,"score":0.09018969535827637},{"id":"https://openalex.org/C111919701","wikidata":"https://www.wikidata.org/wiki/Q9135","display_name":"Operating system","level":1,"score":0.0},{"id":"https://openalex.org/C121332964","wikidata":"https://www.wikidata.org/wiki/Q413","display_name":"Physics","level":0,"score":0.0},{"id":"https://openalex.org/C97355855","wikidata":"https://www.wikidata.org/wiki/Q11473","display_name":"Thermodynamics","level":1,"score":0.0},{"id":"https://openalex.org/C199539241","wikidata":"https://www.wikidata.org/wiki/Q7748","display_name":"Law","level":1,"score":0.0}],"mesh":[{"descriptor_ui":"D000067917","descriptor_name":"Cloud Computing","qualifier_ui":null,"qualifier_name":null,"is_major_topic":true},{"descriptor_ui":"D000067917","descriptor_name":"Cloud Computing","qualifier_ui":null,"qualifier_name":null,"is_major_topic":true},{"descriptor_ui":"D000067917","descriptor_name":"Cloud Computing","qualifier_ui":null,"qualifier_name":null,"is_major_topic":true},{"descriptor_ui":"D000067917","descriptor_name":"Cloud Computing","qualifier_ui":null,"qualifier_name":null,"is_major_topic":true},{"descriptor_ui":"D000067917","descriptor_name":"Cloud Computing","qualifier_ui":null,"qualifier_name":null,"is_major_topic":true},{"descriptor_ui":"D000077558","descriptor_name":"Big Data","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D000077558","descriptor_name":"Big Data","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D000077558","descriptor_name":"Big Data","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D000077558","descriptor_name":"Big Data","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D000077558","descriptor_name":"Big Data","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D006801","descriptor_name":"Humans","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D006801","descriptor_name":"Humans","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D006801","descriptor_name":"Humans","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D006801","descriptor_name":"Humans","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D006801","descriptor_name":"Humans","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D012984","descriptor_name":"Software","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D012984","descriptor_name":"Software","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D012984","descriptor_name":"Software","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D012984","descriptor_name":"Software","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D012984","descriptor_name":"Software","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D014481","descriptor_name":"United States","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D014481","descriptor_name":"United States","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D014481","descriptor_name":"United States","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D014481","descriptor_name":"United States","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D014481","descriptor_name":"United States","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D019295","descriptor_name":"Computational Biology","qualifier_ui":"Q000193","qualifier_name":"education","is_major_topic":false},{"descriptor_ui":"D019295","descriptor_name":"Computational Biology","qualifier_ui":"Q000193","qualifier_name":"education","is_major_topic":false},{"descriptor_ui":"D019295","descriptor_name":"Computational Biology","qualifier_ui":"Q000193","qualifier_name":"education","is_major_topic":false},{"descriptor_ui":"D019295","descriptor_name":"Computational Biology","qualifier_ui":"Q000193","qualifier_name":"education","is_major_topic":false},{"descriptor_ui":"D019295","descriptor_name":"Computational Biology","qualifier_ui":"Q000193","qualifier_name":"education","is_major_topic":false},{"descriptor_ui":"D019295","descriptor_name":"Computational Biology","qualifier_ui":"Q000379","qualifier_name":"methods","is_major_topic":false},{"descriptor_ui":"D019295","descriptor_name":"Computational Biology","qualifier_ui":"Q000379","qualifier_name":"methods","is_major_topic":false},{"descriptor_ui":"D019295","descriptor_name":"Computational Biology","qualifier_ui":"Q000379","qualifier_name":"methods","is_major_topic":false},{"descriptor_ui":"D019295","descriptor_name":"Computational Biology","qualifier_ui":"Q000379","qualifier_name":"methods","is_major_topic":false},{"descriptor_ui":"D019295","descriptor_name":"Computational Biology","qualifier_ui":"Q000379","qualifier_name":"methods","is_major_topic":false},{"descriptor_ui":"D035843","descriptor_name":"Biomedical Research","qualifier_ui":null,"qualifier_name":null,"is_major_topic":true},{"descriptor_ui":"D035843","descriptor_name":"Biomedical Research","qualifier_ui":null,"qualifier_name":null,"is_major_topic":true},{"descriptor_ui":"D035843","descriptor_name":"Biomedical Research","qualifier_ui":null,"qualifier_name":null,"is_major_topic":true},{"descriptor_ui":"D035843","descriptor_name":"Biomedical Research","qualifier_ui":null,"qualifier_name":null,"is_major_topic":true},{"descriptor_ui":"D035843","descriptor_name":"Biomedical Research","qualifier_ui":null,"qualifier_name":null,"is_major_topic":true}],"locations_count":4,"locations":[{"id":"doi:10.1093/bib/bbae478","is_oa":true,"landing_page_url":"https://doi.org/10.1093/bib/bbae478","pdf_url":"https://academic.oup.com/bib/article-pdf/25/Supplement_1/bbae478/59633757/bbae478.pdf","source":{"id":"https://openalex.org/S91767247","display_name":"Briefings in Bioinformatics","issn_l":"1467-5463","issn":["1467-5463","1477-4054"],"is_oa":true,"is_in_doaj":true,"is_core":true,"host_organization":"https://openalex.org/P4310311648","host_organization_name":"Oxford University Press","host_organization_lineage":["https://openalex.org/P4310311648","https://openalex.org/P4310311647"],"host_organization_lineage_names":["Oxford University Press","University of Oxford"],"type":"journal"},"license":"public-domain","license_id":"https://openalex.org/licenses/public-domain","version":"publishedVersion","is_accepted":true,"is_published":true,"raw_source_name":"Briefings in Bioinformatics","raw_type":"journal-article"},{"id":"pmid:39376084","is_oa":false,"landing_page_url":"https://pubmed.ncbi.nlm.nih.gov/39376084","pdf_url":null,"source":{"id":"https://openalex.org/S4306525036","display_name":"PubMed","issn_l":null,"issn":null,"is_oa":false,"is_in_doaj":false,"is_core":false,"host_organization":"https://openalex.org/I1299303238","host_organization_name":"National Institutes of Health","host_organization_lineage":["https://openalex.org/I1299303238"],"host_organization_lineage_names":[],"type":"repository"},"license":null,"license_id":null,"version":"publishedVersion","is_accepted":true,"is_published":true,"raw_source_name":"Briefings in bioinformatics","raw_type":null},{"id":"pmh:oai:pubmedcentral.nih.gov:11458913","is_oa":true,"landing_page_url":"https://pmc.ncbi.nlm.nih.gov/articles/PMC11458913/","pdf_url":"https://pmc.ncbi.nlm.nih.gov/articles/PMC11458913/pdf/bbae478.pdf","source":{"id":"https://openalex.org/S2764455111","display_name":"PubMed Central","issn_l":null,"issn":null,"is_oa":true,"is_in_doaj":false,"is_core":false,"host_organization":"https://openalex.org/I1299303238","host_organization_name":"National Institutes of Health","host_organization_lineage":["https://openalex.org/I1299303238"],"host_organization_lineage_names":[],"type":"repository"},"license":"public-domain","license_id":"https://openalex.org/licenses/public-domain","version":"submittedVersion","is_accepted":false,"is_published":false,"raw_source_name":"Brief Bioinform","raw_type":"Text"},{"id":"pmh:oai:europepmc.org:11306389","is_oa":false,"landing_page_url":"https://www.ncbi.nlm.nih.gov/pmc/articles/11458913","pdf_url":null,"source":{"id":"https://openalex.org/S4306400806","display_name":"Europe PMC (PubMed Central)","issn_l":null,"issn":null,"is_oa":false,"is_in_doaj":false,"is_core":false,"host_organization":"https://openalex.org/I1303153112","host_organization_name":"European Bioinformatics Institute","host_organization_lineage":["https://openalex.org/I1303153112"],"host_organization_lineage_names":[],"type":"repository"},"license":"public-domain","license_id":"https://openalex.org/licenses/public-domain","version":"submittedVersion","is_accepted":false,"is_published":false,"raw_source_name":null,"raw_type":"Text"}],"best_oa_location":{"id":"doi:10.1093/bib/bbae478","is_oa":true,"landing_page_url":"https://doi.org/10.1093/bib/bbae478","pdf_url":"https://academic.oup.com/bib/article-pdf/25/Supplement_1/bbae478/59633757/bbae478.pdf","source":{"id":"https://openalex.org/S91767247","display_name":"Briefings in Bioinformatics","issn_l":"1467-5463","issn":["1467-5463","1477-4054"],"is_oa":true,"is_in_doaj":true,"is_core":true,"host_organization":"https://openalex.org/P4310311648","host_organization_name":"Oxford University Press","host_organization_lineage":["https://openalex.org/P4310311648","https://openalex.org/P4310311647"],"host_organization_lineage_names":["Oxford University Press","University of Oxford"],"type":"journal"},"license":"public-domain","license_id":"https://openalex.org/licenses/public-domain","version":"publishedVersion","is_accepted":true,"is_published":true,"raw_source_name":"Briefings in Bioinformatics","raw_type":"journal-article"},"sustainable_development_goals":[{"score":0.6200000047683716,"id":"https://metadata.un.org/sdg/9","display_name":"Industry, innovation and infrastructure"}],"awards":[],"funders":[{"id":"https://openalex.org/F4320332161","display_name":"National Institutes of Health","ror":"https://ror.org/01cwqze88"},{"id":"https://openalex.org/F4320337354","display_name":"National Institute of General Medical Sciences","ror":"https://ror.org/04q48ey07"}],"has_content":{"grobid_xml":false,"pdf":true},"content_urls":{"pdf":"https://content.openalex.org/works/W4403240373.pdf"},"referenced_works_count":15,"referenced_works":["https://openalex.org/W3121622005","https://openalex.org/W4309849601","https://openalex.org/W4365143562","https://openalex.org/W4400119485","https://openalex.org/W4400574897","https://openalex.org/W4400899319","https://openalex.org/W4400918440","https://openalex.org/W4400918460","https://openalex.org/W4400918462","https://openalex.org/W4400918469","https://openalex.org/W4400918730","https://openalex.org/W4400932438","https://openalex.org/W4401350240","https://openalex.org/W4402533736","https://openalex.org/W6847019757"],"related_works":["https://openalex.org/W2033352828","https://openalex.org/W2355810117","https://openalex.org/W3098313552","https://openalex.org/W70177500","https://openalex.org/W2546418048","https://openalex.org/W2076427967","https://openalex.org/W1980315004","https://openalex.org/W3212184609","https://openalex.org/W2499283203","https://openalex.org/W2795849205"],"abstract_inverted_index":{"Biomedical":[0],"data":[1],"are":[2,132],"growing":[3],"exponentially":[4],"in":[5,120,153],"both":[6],"volume":[7],"and":[8,19,43,93,107,137,146],"levels":[9],"of":[10,17,37,47,58,66,116],"complexity,":[11],"due":[12],"to":[13,27,73,134,140,143],"the":[14,64,117,121,154],"rapid":[15],"advancement":[16],"technologies":[18],"research":[20,38,88,152],"methodologies.":[21],"Analyzing":[22],"these":[23,85],"large":[24,114],"datasets,":[25],"referred":[26],"collectively":[28],"as":[29,50],"\"big":[30],"data,\"":[31],"has":[32],"become":[33],"an":[34,126],"integral":[35],"component":[36],"that":[39,81,111],"guides":[40],"experimentation-driven":[41],"discovery":[42,48],"a":[44,113],"new":[45,130],"engine":[46],"itself":[49],"it":[51],"uncovers":[52],"previously":[53],"unknown":[54],"connections":[55],"through":[56],"mining":[57],"existing":[59],"data.":[60],"To":[61],"fully":[62],"realize":[63],"potential":[65],"big":[67],"data,":[68],"biomedical":[69,144,151],"researchers":[70,145],"need":[71],"access":[72,139],"high-performance-computing":[74],"(HPC)":[75],"resources.":[76],"However,":[77],"supporting":[78],"on-premises":[79],"infrastructure":[80],"keeps":[82],"up":[83],"with":[84],"consistently":[86],"expanding":[87],"needs":[89],"presents":[90,125],"persistent":[91],"financial":[92],"staffing":[94],"challenges,":[95],"even":[96],"for":[97],"well-resourced":[98],"institutions.":[99],"For":[100],"other":[101],"institutions,":[102,110],"including":[103],"primarily":[104],"undergraduate":[105],"institutions":[106],"minority":[108],"serving":[109],"educate":[112],"portion":[115],"future":[118],"workforce":[119],"USA,":[122],"this":[123],"challenge":[124],"insurmountable":[127],"barrier.":[128],"Therefore,":[129],"approaches":[131],"needed":[133],"provide":[135],"broad":[136],"equitable":[138],"HPC":[141],"resources":[142],"students":[147],"who":[148],"will":[149],"advance":[150],"future.":[155]},"counts_by_year":[{"year":2025,"cited_by_count":1},{"year":2024,"cited_by_count":9}],"updated_date":"2026-03-11T06:11:40.159057","created_date":"2025-10-10T00:00:00"}
