{"id":"https://openalex.org/W4400878675","doi":"https://doi.org/10.1093/bib/bbae348","title":"CELA-MFP: a contrast-enhanced and label-adaptive framework for multi-functional therapeutic peptides prediction","display_name":"CELA-MFP: a contrast-enhanced and label-adaptive framework for multi-functional therapeutic peptides prediction","publication_year":2024,"publication_date":"2024-05-23","ids":{"openalex":"https://openalex.org/W4400878675","doi":"https://doi.org/10.1093/bib/bbae348","pmid":"https://pubmed.ncbi.nlm.nih.gov/39038935"},"language":"en","primary_location":{"id":"doi:10.1093/bib/bbae348","is_oa":true,"landing_page_url":"https://doi.org/10.1093/bib/bbae348","pdf_url":null,"source":{"id":"https://openalex.org/S91767247","display_name":"Briefings in Bioinformatics","issn_l":"1467-5463","issn":["1467-5463","1477-4054"],"is_oa":true,"is_in_doaj":true,"is_core":true,"host_organization":"https://openalex.org/P4310311648","host_organization_name":"Oxford University Press","host_organization_lineage":["https://openalex.org/P4310311648","https://openalex.org/P4310311647"],"host_organization_lineage_names":["Oxford University Press","University of Oxford"],"type":"journal"},"license":"cc-by-nc","license_id":"https://openalex.org/licenses/cc-by-nc","version":"publishedVersion","is_accepted":true,"is_published":true,"raw_source_name":"Briefings in Bioinformatics","raw_type":"journal-article"},"type":"article","indexed_in":["crossref","doaj","pubmed"],"open_access":{"is_oa":true,"oa_status":"gold","oa_url":"https://doi.org/10.1093/bib/bbae348","any_repository_has_fulltext":true},"authorships":[{"author_position":"first","author":{"id":"https://openalex.org/A5037638343","display_name":"Yitian Fang","orcid":null},"institutions":[{"id":"https://openalex.org/I183067930","display_name":"Shanghai Jiao Tong University","ror":"https://ror.org/0220qvk04","country_code":"CN","type":"education","lineage":["https://openalex.org/I183067930"]},{"id":"https://openalex.org/I4210136793","display_name":"Peng Cheng Laboratory","ror":"https://ror.org/03qdqbt06","country_code":"CN","type":"facility","lineage":["https://openalex.org/I4210136793"]}],"countries":["CN"],"is_corresponding":false,"raw_author_name":"Yitian Fang","raw_affiliation_strings":["Peng Cheng Laboratory , 2 Xingke 1st Street, Nanshan District, Shenzhen 518055 , China","State Key Laboratory of Microbial Metabolism , Joint International Research Laboratory of Metabolic and Developmental Sciences, School of Life Sciences and Biotechnology, Shanghai Jiao Tong University, 800 Dongchuan Road, Shanghai 200240, China"],"raw_orcid":"https://orcid.org/0000-0002-4644-1464","affiliations":[{"raw_affiliation_string":"Peng Cheng Laboratory , 2 Xingke 1st Street, Nanshan District, Shenzhen 518055 , China","institution_ids":["https://openalex.org/I4210136793"]},{"raw_affiliation_string":"State Key Laboratory of Microbial Metabolism , Joint International Research Laboratory of Metabolic and Developmental Sciences, School of Life Sciences and Biotechnology, Shanghai Jiao Tong University, 800 Dongchuan Road, Shanghai 200240, China","institution_ids":["https://openalex.org/I183067930"]}]},{"author_position":"middle","author":{"id":"https://openalex.org/A5010072640","display_name":"Mingshuang Luo","orcid":null},"institutions":[{"id":"https://openalex.org/I4210136793","display_name":"Peng Cheng Laboratory","ror":"https://ror.org/03qdqbt06","country_code":"CN","type":"facility","lineage":["https://openalex.org/I4210136793"]}],"countries":["CN"],"is_corresponding":true,"raw_author_name":"Mingshuang Luo","raw_affiliation_strings":["Peng Cheng Laboratory , 2 Xingke 1st Street, Nanshan District, Shenzhen 518055 , China"],"raw_orcid":null,"affiliations":[{"raw_affiliation_string":"Peng Cheng Laboratory , 2 Xingke 1st Street, Nanshan District, Shenzhen 518055 , China","institution_ids":["https://openalex.org/I4210136793"]}]},{"author_position":"middle","author":{"id":"https://openalex.org/A5070028902","display_name":"Zhixiang Ren","orcid":"https://orcid.org/0000-0002-4104-3790"},"institutions":[{"id":"https://openalex.org/I4210136793","display_name":"Peng Cheng Laboratory","ror":"https://ror.org/03qdqbt06","country_code":"CN","type":"facility","lineage":["https://openalex.org/I4210136793"]}],"countries":["CN"],"is_corresponding":false,"raw_author_name":"Zhixiang Ren","raw_affiliation_strings":["Peng Cheng Laboratory , 2 Xingke 1st Street, Nanshan District, Shenzhen 518055 , China"],"raw_orcid":null,"affiliations":[{"raw_affiliation_string":"Peng Cheng Laboratory , 2 Xingke 1st Street, Nanshan District, Shenzhen 518055 , China","institution_ids":["https://openalex.org/I4210136793"]}]},{"author_position":"middle","author":{"id":"https://openalex.org/A5033232360","display_name":"Leyi Wei","orcid":"https://orcid.org/0000-0003-1444-190X"},"institutions":[{"id":"https://openalex.org/I191208505","display_name":"Xiamen University","ror":"https://ror.org/00mcjh785","country_code":"CN","type":"education","lineage":["https://openalex.org/I191208505"]},{"id":"https://openalex.org/I49835588","display_name":"Macao Polytechnic University","ror":"https://ror.org/02sf5td35","country_code":"MO","type":"education","lineage":["https://openalex.org/I49835588"]}],"countries":["CN","MO"],"is_corresponding":true,"raw_author_name":"Leyi Wei","raw_affiliation_strings":["Centre for Artificial Intelligence Driven Drug Discovery , Faculty of Applied Sciences, Macao Polytechnic University, R. de Lu\u00eds Gonzaga Gomes, Macao 999078, China","School of Informatics, Xiamen University , 422 Siming South Road, Xiamen 361005 , China"],"raw_orcid":"https://orcid.org/0000-0003-1444-190X","affiliations":[{"raw_affiliation_string":"Centre for Artificial Intelligence Driven Drug Discovery , Faculty of Applied Sciences, Macao Polytechnic University, R. de Lu\u00eds Gonzaga Gomes, Macao 999078, China","institution_ids":["https://openalex.org/I49835588"]},{"raw_affiliation_string":"School of Informatics, Xiamen University , 422 Siming South Road, Xiamen 361005 , China","institution_ids":["https://openalex.org/I191208505"]}]},{"author_position":"last","author":{"id":"https://openalex.org/A5041491902","display_name":"Dong\u2010Qing Wei","orcid":"https://orcid.org/0000-0003-4200-7502"},"institutions":[{"id":"https://openalex.org/I183067930","display_name":"Shanghai Jiao Tong University","ror":"https://ror.org/0220qvk04","country_code":"CN","type":"education","lineage":["https://openalex.org/I183067930"]},{"id":"https://openalex.org/I4210136793","display_name":"Peng Cheng Laboratory","ror":"https://ror.org/03qdqbt06","country_code":"CN","type":"facility","lineage":["https://openalex.org/I4210136793"]}],"countries":["CN"],"is_corresponding":true,"raw_author_name":"Dong-Qing Wei","raw_affiliation_strings":["Peng Cheng Laboratory , 2 Xingke 1st Street, Nanshan District, Shenzhen 518055 , China","State Key Laboratory of Microbial Metabolism , Joint International Research Laboratory of Metabolic and Developmental Sciences, School of Life Sciences and Biotechnology, Shanghai Jiao Tong University, 800 Dongchuan Road, Shanghai 200240, China"],"raw_orcid":"https://orcid.org/0000-0003-4200-7502","affiliations":[{"raw_affiliation_string":"Peng Cheng Laboratory , 2 Xingke 1st Street, Nanshan District, Shenzhen 518055 , China","institution_ids":["https://openalex.org/I4210136793"]},{"raw_affiliation_string":"State Key Laboratory of Microbial Metabolism , Joint International Research Laboratory of Metabolic and Developmental Sciences, School of Life Sciences and Biotechnology, Shanghai Jiao Tong University, 800 Dongchuan Road, Shanghai 200240, China","institution_ids":["https://openalex.org/I183067930"]}]}],"institutions":[],"countries_distinct_count":2,"institutions_distinct_count":4,"corresponding_author_ids":["https://openalex.org/A5010072640","https://openalex.org/A5033232360","https://openalex.org/A5041491902"],"corresponding_institution_ids":["https://openalex.org/I183067930","https://openalex.org/I191208505","https://openalex.org/I4210136793","https://openalex.org/I49835588"],"apc_list":{"value":4011,"currency":"USD","value_usd":4011},"apc_paid":{"value":4011,"currency":"USD","value_usd":4011},"fwci":2.7988,"has_fulltext":true,"cited_by_count":17,"citation_normalized_percentile":{"value":0.91444399,"is_in_top_1_percent":false,"is_in_top_10_percent":true},"cited_by_percentile_year":{"min":90,"max":100},"biblio":{"volume":"25","issue":"4","first_page":null,"last_page":null},"is_retracted":false,"is_paratext":false,"is_xpac":false,"primary_topic":{"id":"https://openalex.org/T12254","display_name":"Machine Learning in Bioinformatics","score":0.9998000264167786,"subfield":{"id":"https://openalex.org/subfields/1312","display_name":"Molecular Biology"},"field":{"id":"https://openalex.org/fields/13","display_name":"Biochemistry, Genetics and Molecular Biology"},"domain":{"id":"https://openalex.org/domains/1","display_name":"Life Sciences"}},"topics":[{"id":"https://openalex.org/T12254","display_name":"Machine Learning in Bioinformatics","score":0.9998000264167786,"subfield":{"id":"https://openalex.org/subfields/1312","display_name":"Molecular Biology"},"field":{"id":"https://openalex.org/fields/13","display_name":"Biochemistry, Genetics and Molecular Biology"},"domain":{"id":"https://openalex.org/domains/1","display_name":"Life Sciences"}},{"id":"https://openalex.org/T10911","display_name":"Chemical Synthesis and Analysis","score":0.9990000128746033,"subfield":{"id":"https://openalex.org/subfields/1312","display_name":"Molecular Biology"},"field":{"id":"https://openalex.org/fields/13","display_name":"Biochemistry, Genetics and Molecular Biology"},"domain":{"id":"https://openalex.org/domains/1","display_name":"Life Sciences"}},{"id":"https://openalex.org/T11103","display_name":"Antimicrobial Peptides and Activities","score":0.9990000128746033,"subfield":{"id":"https://openalex.org/subfields/2404","display_name":"Microbiology"},"field":{"id":"https://openalex.org/fields/24","display_name":"Immunology and Microbiology"},"domain":{"id":"https://openalex.org/domains/1","display_name":"Life Sciences"}}],"keywords":[{"id":"https://openalex.org/keywords/interpretability","display_name":"Interpretability","score":0.7772803902626038},{"id":"https://openalex.org/keywords/computer-science","display_name":"Computer science","score":0.6575866937637329},{"id":"https://openalex.org/keywords/artificial-intelligence","display_name":"Artificial intelligence","score":0.5690965056419373},{"id":"https://openalex.org/keywords/machine-learning","display_name":"Machine learning","score":0.44195523858070374}],"concepts":[{"id":"https://openalex.org/C2781067378","wikidata":"https://www.wikidata.org/wiki/Q17027399","display_name":"Interpretability","level":2,"score":0.7772803902626038},{"id":"https://openalex.org/C41008148","wikidata":"https://www.wikidata.org/wiki/Q21198","display_name":"Computer science","level":0,"score":0.6575866937637329},{"id":"https://openalex.org/C154945302","wikidata":"https://www.wikidata.org/wiki/Q11660","display_name":"Artificial intelligence","level":1,"score":0.5690965056419373},{"id":"https://openalex.org/C119857082","wikidata":"https://www.wikidata.org/wiki/Q2539","display_name":"Machine learning","level":1,"score":0.44195523858070374}],"mesh":[{"descriptor_ui":"D000077321","descriptor_name":"Deep Learning","qualifier_ui":null,"qualifier_name":null,"is_major_topic":true},{"descriptor_ui":"D000077321","descriptor_name":"Deep Learning","qualifier_ui":null,"qualifier_name":null,"is_major_topic":true},{"descriptor_ui":"D000077321","descriptor_name":"Deep Learning","qualifier_ui":null,"qualifier_name":null,"is_major_topic":true},{"descriptor_ui":"D000077321","descriptor_name":"Deep Learning","qualifier_ui":null,"qualifier_name":null,"is_major_topic":true},{"descriptor_ui":"D000465","descriptor_name":"Algorithms","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D000465","descriptor_name":"Algorithms","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D000465","descriptor_name":"Algorithms","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D000465","descriptor_name":"Algorithms","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D006801","descriptor_name":"Humans","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D006801","descriptor_name":"Humans","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D006801","descriptor_name":"Humans","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D006801","descriptor_name":"Humans","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D010455","descriptor_name":"Peptides","qualifier_ui":"Q000737","qualifier_name":"chemistry","is_major_topic":true},{"descriptor_ui":"D010455","descriptor_name":"Peptides","qualifier_ui":"Q000737","qualifier_name":"chemistry","is_major_topic":true},{"descriptor_ui":"D010455","descriptor_name":"Peptides","qualifier_ui":"Q000737","qualifier_name":"chemistry","is_major_topic":true},{"descriptor_ui":"D010455","descriptor_name":"Peptides","qualifier_ui":"Q000737","qualifier_name":"chemistry","is_major_topic":true},{"descriptor_ui":"D012984","descriptor_name":"Software","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D012984","descriptor_name":"Software","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D012984","descriptor_name":"Software","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D012984","descriptor_name":"Software","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D019295","descriptor_name":"Computational Biology","qualifier_ui":"Q000379","qualifier_name":"methods","is_major_topic":false},{"descriptor_ui":"D019295","descriptor_name":"Computational Biology","qualifier_ui":"Q000379","qualifier_name":"methods","is_major_topic":false},{"descriptor_ui":"D019295","descriptor_name":"Computational Biology","qualifier_ui":"Q000379","qualifier_name":"methods","is_major_topic":false},{"descriptor_ui":"D019295","descriptor_name":"Computational Biology","qualifier_ui":"Q000379","qualifier_name":"methods","is_major_topic":false},{"descriptor_ui":"D030562","descriptor_name":"Databases, Protein","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D030562","descriptor_name":"Databases, Protein","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D030562","descriptor_name":"Databases, Protein","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D030562","descriptor_name":"Databases, Protein","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false}],"locations_count":3,"locations":[{"id":"doi:10.1093/bib/bbae348","is_oa":true,"landing_page_url":"https://doi.org/10.1093/bib/bbae348","pdf_url":null,"source":{"id":"https://openalex.org/S91767247","display_name":"Briefings in Bioinformatics","issn_l":"1467-5463","issn":["1467-5463","1477-4054"],"is_oa":true,"is_in_doaj":true,"is_core":true,"host_organization":"https://openalex.org/P4310311648","host_organization_name":"Oxford University Press","host_organization_lineage":["https://openalex.org/P4310311648","https://openalex.org/P4310311647"],"host_organization_lineage_names":["Oxford University Press","University of Oxford"],"type":"journal"},"license":"cc-by-nc","license_id":"https://openalex.org/licenses/cc-by-nc","version":"publishedVersion","is_accepted":true,"is_published":true,"raw_source_name":"Briefings in Bioinformatics","raw_type":"journal-article"},{"id":"pmid:39038935","is_oa":false,"landing_page_url":"https://pubmed.ncbi.nlm.nih.gov/39038935","pdf_url":null,"source":{"id":"https://openalex.org/S4306525036","display_name":"PubMed","issn_l":null,"issn":null,"is_oa":false,"is_in_doaj":false,"is_core":false,"host_organization":"https://openalex.org/I1299303238","host_organization_name":"National Institutes of Health","host_organization_lineage":["https://openalex.org/I1299303238"],"host_organization_lineage_names":[],"type":"repository"},"license":null,"license_id":null,"version":"publishedVersion","is_accepted":true,"is_published":true,"raw_source_name":"Briefings in bioinformatics","raw_type":null},{"id":"pmh:oai:pubmedcentral.nih.gov:11262836","is_oa":true,"landing_page_url":"https://www.ncbi.nlm.nih.gov/pmc/articles/11262836","pdf_url":"https://pmc.ncbi.nlm.nih.gov/articles/PMC11262836/pdf/bbae348.pdf","source":{"id":"https://openalex.org/S2764455111","display_name":"PubMed Central","issn_l":null,"issn":null,"is_oa":true,"is_in_doaj":false,"is_core":false,"host_organization":"https://openalex.org/I1299303238","host_organization_name":"National Institutes of Health","host_organization_lineage":["https://openalex.org/I1299303238"],"host_organization_lineage_names":[],"type":"repository"},"license":"cc-by-nc","license_id":"https://openalex.org/licenses/cc-by-nc","version":"submittedVersion","is_accepted":false,"is_published":false,"raw_source_name":"Brief Bioinform","raw_type":"Text"}],"best_oa_location":{"id":"doi:10.1093/bib/bbae348","is_oa":true,"landing_page_url":"https://doi.org/10.1093/bib/bbae348","pdf_url":null,"source":{"id":"https://openalex.org/S91767247","display_name":"Briefings in Bioinformatics","issn_l":"1467-5463","issn":["1467-5463","1477-4054"],"is_oa":true,"is_in_doaj":true,"is_core":true,"host_organization":"https://openalex.org/P4310311648","host_organization_name":"Oxford University Press","host_organization_lineage":["https://openalex.org/P4310311648","https://openalex.org/P4310311647"],"host_organization_lineage_names":["Oxford University Press","University of Oxford"],"type":"journal"},"license":"cc-by-nc","license_id":"https://openalex.org/licenses/cc-by-nc","version":"publishedVersion","is_accepted":true,"is_published":true,"raw_source_name":"Briefings in Bioinformatics","raw_type":"journal-article"},"sustainable_development_goals":[],"awards":[{"id":"https://openalex.org/G1369294023","display_name":null,"funder_award_id":"2023YFE0199200","funder_id":"https://openalex.org/F4320322999","funder_display_name":"Shanghai Jiao Tong University"},{"id":"https://openalex.org/G2191216477","display_name":null,"funder_award_id":"32030063","funder_id":"https://openalex.org/F4320321001","funder_display_name":"National Natural Science Foundation of China"},{"id":"https://openalex.org/G3487798717","display_name":null,"funder_award_id":"YG2021ZD02","funder_id":"https://openalex.org/F4320322999","funder_display_name":"Shanghai Jiao Tong University"},{"id":"https://openalex.org/G5971936823","display_name":null,"funder_award_id":"0177/2023/RIA3","funder_id":"https://openalex.org/F4320315893","funder_display_name":"VNU Science and Technology Development Fund"},{"id":"https://openalex.org/G7473972287","display_name":null,"funder_award_id":"32070662","funder_id":"https://openalex.org/F4320321001","funder_display_name":"National Natural Science Foundation of China"}],"funders":[{"id":"https://openalex.org/F4320315893","display_name":"VNU Science and Technology Development Fund","ror":"https://ror.org/044vr6g03"},{"id":"https://openalex.org/F4320318558","display_name":"Peng Cheng Laboratory","ror":"https://ror.org/03qdqbt06"},{"id":"https://openalex.org/F4320321001","display_name":"National Natural Science Foundation of China","ror":"https://ror.org/01h0zpd94"},{"id":"https://openalex.org/F4320322999","display_name":"Shanghai Jiao Tong University","ror":"https://ror.org/0220qvk04"}],"has_content":{"pdf":false,"grobid_xml":false},"content_urls":null,"referenced_works_count":58,"referenced_works":["https://openalex.org/W1486558210","https://openalex.org/W1542076407","https://openalex.org/W1976515044","https://openalex.org/W1992450378","https://openalex.org/W2030624081","https://openalex.org/W2097834518","https://openalex.org/W2100621506","https://openalex.org/W2109006082","https://openalex.org/W2127973586","https://openalex.org/W2166912588","https://openalex.org/W2170747616","https://openalex.org/W2187089797","https://openalex.org/W2739980134","https://openalex.org/W2794956775","https://openalex.org/W2898402099","https://openalex.org/W2904762451","https://openalex.org/W2908510526","https://openalex.org/W2918929658","https://openalex.org/W2944959957","https://openalex.org/W2951433247","https://openalex.org/W2971227267","https://openalex.org/W2981142240","https://openalex.org/W2985955054","https://openalex.org/W2996238637","https://openalex.org/W2999580270","https://openalex.org/W3015041131","https://openalex.org/W3034328552","https://openalex.org/W3092406486","https://openalex.org/W3093729849","https://openalex.org/W3109659125","https://openalex.org/W3111392271","https://openalex.org/W3119003488","https://openalex.org/W3127297964","https://openalex.org/W3131121088","https://openalex.org/W3139265997","https://openalex.org/W3150808126","https://openalex.org/W3174642256","https://openalex.org/W3195657207","https://openalex.org/W3203053846","https://openalex.org/W3205913984","https://openalex.org/W3205925781","https://openalex.org/W4230918047","https://openalex.org/W4282039921","https://openalex.org/W4295879738","https://openalex.org/W4310641985","https://openalex.org/W4312113926","https://openalex.org/W4315621831","https://openalex.org/W4366085699","https://openalex.org/W4377223989","https://openalex.org/W4378782822","https://openalex.org/W4385245566","https://openalex.org/W4389450648","https://openalex.org/W6739901393","https://openalex.org/W6756936392","https://openalex.org/W6757817989","https://openalex.org/W6763868836","https://openalex.org/W6770659305","https://openalex.org/W6851874352"],"related_works":["https://openalex.org/W1986582023","https://openalex.org/W2961085424","https://openalex.org/W2966829450","https://openalex.org/W4306674287","https://openalex.org/W3046775127","https://openalex.org/W3107602296","https://openalex.org/W4394896187","https://openalex.org/W3170094116","https://openalex.org/W4386462264","https://openalex.org/W4364306694"],"abstract_inverted_index":{"Functional":[0],"peptides":[1,27,147],"play":[2],"crucial":[3],"roles":[4],"in":[5,13,134],"various":[6],"biological":[7],"processes":[8],"and":[9,20,35,52,122,136,157],"hold":[10],"significant":[11],"potential":[12],"many":[14],"fields":[15],"such":[16],"as":[17,150],"drug":[18],"discovery":[19],"biotechnology.":[21],"Accurately":[22],"predicting":[23,56,145],"the":[24,92,151,154],"functions":[25],"of":[26,94,126,153],"is":[28,100,128,148],"essential":[29],"for":[30,55,81,116,144],"understanding":[31],"their":[32],"diverse":[33],"effects":[34],"designing":[36],"peptide-based":[37],"therapeutics.":[38],"Here,":[39],"we":[40],"propose":[41],"CELA-MFP,":[42],"a":[43,62,78,140],"deep":[44],"learning":[45,99],"framework":[46],"that":[47,107],"incorporates":[48],"feature":[49],"Contrastive":[50],"Enhancement":[51],"Label":[53],"Adaptation":[54],"Multi-Functional":[57],"therapeutic":[58],"Peptides.":[59],"CELA-MFP":[60,108,127,156],"utilizes":[61],"protein":[63],"language":[64],"model":[65],"(pLM)":[66],"to":[67],"extract":[68],"features":[69],"from":[70],"peptide":[71,96],"sequences,":[72],"which":[73],"are":[74],"then":[75],"fed":[76],"into":[77],"Transformer":[79,137],"decoder":[80],"function":[82],"prediction,":[83],"effectively":[84],"modeling":[85],"correlations":[86],"between":[87],"different":[88],"functions.":[89],"To":[90],"enhance":[91],"representation":[93],"each":[95],"sequence,":[97],"contrastive":[98],"employed":[101],"during":[102],"training.":[103],"Experimental":[104],"results":[105],"demonstrate":[106],"outperforms":[109],"state-of-the-art":[110],"methods":[111],"on":[112],"most":[113],"evaluation":[114],"metrics":[115],"two":[117],"widely":[118],"used":[119],"datasets,":[120],"MFBP":[121],"MFTP.":[123],"The":[124],"interpretability":[125],"demonstrated":[129],"by":[130],"visualizing":[131],"attention":[132],"patterns":[133],"pLM":[135],"decoder.":[138],"Finally,":[139],"user-friendly":[141],"online":[142],"server":[143],"multi-functional":[146],"established":[149],"implementation":[152],"proposed":[155],"can":[158],"be":[159],"freely":[160],"accessed":[161],"at":[162],"http://dreamai.cmii.online/CELA-MFP.":[163]},"counts_by_year":[{"year":2026,"cited_by_count":2},{"year":2025,"cited_by_count":14},{"year":2024,"cited_by_count":1}],"updated_date":"2026-07-22T07:51:19.307946","created_date":"2025-10-10T00:00:00"}
