{"id":"https://openalex.org/W4400457192","doi":"https://doi.org/10.1093/bib/bbae336","title":"SVDF: enhancing structural variation detect from long-read sequencing via automatic filtering strategies","display_name":"SVDF: enhancing structural variation detect from long-read sequencing via automatic filtering strategies","publication_year":2024,"publication_date":"2024-05-23","ids":{"openalex":"https://openalex.org/W4400457192","doi":"https://doi.org/10.1093/bib/bbae336","pmid":"https://pubmed.ncbi.nlm.nih.gov/38980375"},"language":"en","primary_location":{"id":"doi:10.1093/bib/bbae336","is_oa":true,"landing_page_url":"https://doi.org/10.1093/bib/bbae336","pdf_url":"https://academic.oup.com/bib/article-pdf/25/4/bbae336/58482682/bbae336.pdf","source":{"id":"https://openalex.org/S91767247","display_name":"Briefings in Bioinformatics","issn_l":"1467-5463","issn":["1467-5463","1477-4054"],"is_oa":true,"is_in_doaj":true,"is_core":true,"host_organization":"https://openalex.org/P4310311648","host_organization_name":"Oxford University Press","host_organization_lineage":["https://openalex.org/P4310311648","https://openalex.org/P4310311647"],"host_organization_lineage_names":["Oxford University Press","University of Oxford"],"type":"journal"},"license":"cc-by","license_id":"https://openalex.org/licenses/cc-by","version":"publishedVersion","is_accepted":true,"is_published":true,"raw_source_name":"Briefings in Bioinformatics","raw_type":"journal-article"},"type":"article","indexed_in":["crossref","doaj","pubmed"],"open_access":{"is_oa":true,"oa_status":"gold","oa_url":"https://academic.oup.com/bib/article-pdf/25/4/bbae336/58482682/bbae336.pdf","any_repository_has_fulltext":true},"authorships":[{"author_position":"first","author":{"id":"https://openalex.org/A5053942142","display_name":"Heng Hu","orcid":"https://orcid.org/0000-0002-9505-4049"},"institutions":[{"id":"https://openalex.org/I47689461","display_name":"Northeast Forestry University","ror":"https://ror.org/02yxnh564","country_code":"CN","type":"education","lineage":["https://openalex.org/I47689461"]}],"countries":["CN"],"is_corresponding":false,"raw_author_name":"Heng Hu","raw_affiliation_strings":["College of Life Sciences, Northeast Forestry University , Harbin 150000 , China"],"raw_orcid":"https://orcid.org/0000-0002-9505-4049","affiliations":[{"raw_affiliation_string":"College of Life Sciences, Northeast Forestry University , Harbin 150000 , China","institution_ids":["https://openalex.org/I47689461"]}]},{"author_position":"middle","author":{"id":"https://openalex.org/A5075906577","display_name":"Runtian Gao","orcid":"https://orcid.org/0009-0009-0870-6693"},"institutions":[{"id":"https://openalex.org/I47689461","display_name":"Northeast Forestry University","ror":"https://ror.org/02yxnh564","country_code":"CN","type":"education","lineage":["https://openalex.org/I47689461"]}],"countries":["CN"],"is_corresponding":false,"raw_author_name":"Runtian Gao","raw_affiliation_strings":["College of Life Sciences, Northeast Forestry University , Harbin 150000 , China"],"raw_orcid":"https://orcid.org/0009-0009-0870-6693","affiliations":[{"raw_affiliation_string":"College of Life Sciences, Northeast Forestry University , Harbin 150000 , China","institution_ids":["https://openalex.org/I47689461"]}]},{"author_position":"middle","author":{"id":"https://openalex.org/A5063784705","display_name":"Wentao Gao","orcid":"https://orcid.org/0009-0001-8110-2396"},"institutions":[{"id":"https://openalex.org/I47689461","display_name":"Northeast Forestry University","ror":"https://ror.org/02yxnh564","country_code":"CN","type":"education","lineage":["https://openalex.org/I47689461"]}],"countries":["CN"],"is_corresponding":false,"raw_author_name":"Wentao Gao","raw_affiliation_strings":["College of Life Sciences, Northeast Forestry University , Harbin 150000 , China"],"raw_orcid":null,"affiliations":[{"raw_affiliation_string":"College of Life Sciences, Northeast Forestry University , Harbin 150000 , China","institution_ids":["https://openalex.org/I47689461"]}]},{"author_position":"middle","author":{"id":"https://openalex.org/A5004012174","display_name":"Bo Gao","orcid":"https://orcid.org/0000-0002-8750-0547"},"institutions":[{"id":"https://openalex.org/I156144747","display_name":"Harbin Medical University","ror":"https://ror.org/05jscf583","country_code":"CN","type":"education","lineage":["https://openalex.org/I156144747"]},{"id":"https://openalex.org/I4210132813","display_name":"Second Affiliated Hospital of Harbin Medical University","ror":"https://ror.org/03s8txj32","country_code":"CN","type":"healthcare","lineage":["https://openalex.org/I4210132813"]}],"countries":["CN"],"is_corresponding":false,"raw_author_name":"Bo Gao","raw_affiliation_strings":["Department of Radiology, The Second Affiliated Hospital of Harbin Medical University , Harbin 150000 , China"],"raw_orcid":null,"affiliations":[{"raw_affiliation_string":"Department of Radiology, The Second Affiliated Hospital of Harbin Medical University , Harbin 150000 , China","institution_ids":["https://openalex.org/I156144747","https://openalex.org/I4210132813"]}]},{"author_position":"middle","author":{"id":"https://openalex.org/A5055263549","display_name":"Zhongjun Jiang","orcid":null},"institutions":[{"id":"https://openalex.org/I47689461","display_name":"Northeast Forestry University","ror":"https://ror.org/02yxnh564","country_code":"CN","type":"education","lineage":["https://openalex.org/I47689461"]}],"countries":["CN"],"is_corresponding":false,"raw_author_name":"Zhongjun Jiang","raw_affiliation_strings":["College of Life Sciences, Northeast Forestry University , Harbin 150000 , China"],"raw_orcid":null,"affiliations":[{"raw_affiliation_string":"College of Life Sciences, Northeast Forestry University , Harbin 150000 , China","institution_ids":["https://openalex.org/I47689461"]}]},{"author_position":"middle","author":{"id":"https://openalex.org/A5062326911","display_name":"Murong Zhou","orcid":"https://orcid.org/0000-0001-9634-8164"},"institutions":[{"id":"https://openalex.org/I47689461","display_name":"Northeast Forestry University","ror":"https://ror.org/02yxnh564","country_code":"CN","type":"education","lineage":["https://openalex.org/I47689461"]}],"countries":["CN"],"is_corresponding":false,"raw_author_name":"Murong Zhou","raw_affiliation_strings":["College of Life Sciences, Northeast Forestry University , Harbin 150000 , China"],"raw_orcid":null,"affiliations":[{"raw_affiliation_string":"College of Life Sciences, Northeast Forestry University , Harbin 150000 , China","institution_ids":["https://openalex.org/I47689461"]}]},{"author_position":"middle","author":{"id":"https://openalex.org/A5100649978","display_name":"Guohua Wang","orcid":"https://orcid.org/0000-0001-7381-2374"},"institutions":[{"id":"https://openalex.org/I4210132245","display_name":"Research Institute of Forestry","ror":"https://ror.org/02nmvgz47","country_code":"CN","type":"facility","lineage":["https://openalex.org/I4210128615","https://openalex.org/I4210132245","https://openalex.org/I4210134523"]},{"id":"https://openalex.org/I4392021092","display_name":"State Key Laboratory of Tree Genetics and Breeding","ror":"https://ror.org/03a1zvg88","country_code":null,"type":"facility","lineage":["https://openalex.org/I4210128615","https://openalex.org/I4210134523","https://openalex.org/I4392021092","https://openalex.org/I47689461"]},{"id":"https://openalex.org/I47689461","display_name":"Northeast Forestry University","ror":"https://ror.org/02yxnh564","country_code":"CN","type":"education","lineage":["https://openalex.org/I47689461"]}],"countries":["CN"],"is_corresponding":true,"raw_author_name":"Guohua Wang","raw_affiliation_strings":["College of Computer and Control Engineering, Northeast Forestry University , Harbin 150000 , China","State Key Laboratory of Tree Genetics and Breeding , Harbin 150000 , China"],"raw_orcid":null,"affiliations":[{"raw_affiliation_string":"College of Computer and Control Engineering, Northeast Forestry University , Harbin 150000 , China","institution_ids":["https://openalex.org/I47689461"]},{"raw_affiliation_string":"State Key Laboratory of Tree Genetics and Breeding , Harbin 150000 , China","institution_ids":["https://openalex.org/I4210132245","https://openalex.org/I4392021092"]}]},{"author_position":"last","author":{"id":"https://openalex.org/A5037643151","display_name":"Tao Jiang","orcid":"https://orcid.org/0000-0002-0673-8503"},"institutions":[{"id":"https://openalex.org/I204983213","display_name":"Harbin Institute of Technology","ror":"https://ror.org/01yqg2h08","country_code":"CN","type":"education","lineage":["https://openalex.org/I204983213"]}],"countries":["CN"],"is_corresponding":true,"raw_author_name":"Tao Jiang","raw_affiliation_strings":["School of Computer Science and Technology, Harbin Institute of Technology , Harbin 150000 , China"],"raw_orcid":"https://orcid.org/0000-0002-0673-8503","affiliations":[{"raw_affiliation_string":"School of Computer Science and Technology, Harbin Institute of Technology , Harbin 150000 , China","institution_ids":["https://openalex.org/I204983213"]}]}],"institutions":[],"countries_distinct_count":1,"institutions_distinct_count":8,"corresponding_author_ids":["https://openalex.org/A5037643151","https://openalex.org/A5100649978"],"corresponding_institution_ids":["https://openalex.org/I204983213","https://openalex.org/I4210132245","https://openalex.org/I4392021092","https://openalex.org/I47689461"],"apc_list":{"value":4011,"currency":"USD","value_usd":4011},"apc_paid":{"value":4011,"currency":"USD","value_usd":4011},"fwci":1.336,"has_fulltext":true,"cited_by_count":6,"citation_normalized_percentile":{"value":0.80012427,"is_in_top_1_percent":false,"is_in_top_10_percent":false},"cited_by_percentile_year":{"min":98,"max":99},"biblio":{"volume":"25","issue":"4","first_page":null,"last_page":null},"is_retracted":false,"is_paratext":false,"is_xpac":false,"primary_topic":{"id":"https://openalex.org/T10015","display_name":"Genomics and Phylogenetic Studies","score":0.9998999834060669,"subfield":{"id":"https://openalex.org/subfields/1312","display_name":"Molecular Biology"},"field":{"id":"https://openalex.org/fields/13","display_name":"Biochemistry, Genetics and Molecular Biology"},"domain":{"id":"https://openalex.org/domains/1","display_name":"Life Sciences"}},"topics":[{"id":"https://openalex.org/T10015","display_name":"Genomics and Phylogenetic Studies","score":0.9998999834060669,"subfield":{"id":"https://openalex.org/subfields/1312","display_name":"Molecular Biology"},"field":{"id":"https://openalex.org/fields/13","display_name":"Biochemistry, Genetics and Molecular Biology"},"domain":{"id":"https://openalex.org/domains/1","display_name":"Life Sciences"}},{"id":"https://openalex.org/T10012","display_name":"Genetic diversity and population structure","score":0.9969000220298767,"subfield":{"id":"https://openalex.org/subfields/1311","display_name":"Genetics"},"field":{"id":"https://openalex.org/fields/13","display_name":"Biochemistry, Genetics and Molecular Biology"},"domain":{"id":"https://openalex.org/domains/1","display_name":"Life Sciences"}},{"id":"https://openalex.org/T10521","display_name":"RNA and protein synthesis mechanisms","score":0.995199978351593,"subfield":{"id":"https://openalex.org/subfields/1312","display_name":"Molecular Biology"},"field":{"id":"https://openalex.org/fields/13","display_name":"Biochemistry, Genetics and Molecular Biology"},"domain":{"id":"https://openalex.org/domains/1","display_name":"Life Sciences"}}],"keywords":[{"id":"https://openalex.org/keywords/benchmarking","display_name":"Benchmarking","score":0.7591961622238159},{"id":"https://openalex.org/keywords/computer-science","display_name":"Computer science","score":0.7487389445304871},{"id":"https://openalex.org/keywords/cluster-analysis","display_name":"Cluster analysis","score":0.5814439654350281},{"id":"https://openalex.org/keywords/variation","display_name":"Variation (astronomy)","score":0.5772526264190674},{"id":"https://openalex.org/keywords/artificial-intelligence","display_name":"Artificial intelligence","score":0.5365453362464905},{"id":"https://openalex.org/keywords/structural-variation","display_name":"Structural variation","score":0.5121974349021912},{"id":"https://openalex.org/keywords/pattern-recognition","display_name":"Pattern recognition (psychology)","score":0.496296226978302},{"id":"https://openalex.org/keywords/noise","display_name":"Noise (video)","score":0.49195215106010437},{"id":"https://openalex.org/keywords/data-mining","display_name":"Data mining","score":0.42470741271972656},{"id":"https://openalex.org/keywords/genome","display_name":"Genome","score":0.3369216322898865},{"id":"https://openalex.org/keywords/image","display_name":"Image (mathematics)","score":0.18158823251724243},{"id":"https://openalex.org/keywords/biology","display_name":"Biology","score":0.15898925065994263},{"id":"https://openalex.org/keywords/gene","display_name":"Gene","score":0.11944365501403809},{"id":"https://openalex.org/keywords/genetics","display_name":"Genetics","score":0.10829561948776245}],"concepts":[{"id":"https://openalex.org/C86251818","wikidata":"https://www.wikidata.org/wiki/Q816754","display_name":"Benchmarking","level":2,"score":0.7591961622238159},{"id":"https://openalex.org/C41008148","wikidata":"https://www.wikidata.org/wiki/Q21198","display_name":"Computer science","level":0,"score":0.7487389445304871},{"id":"https://openalex.org/C73555534","wikidata":"https://www.wikidata.org/wiki/Q622825","display_name":"Cluster analysis","level":2,"score":0.5814439654350281},{"id":"https://openalex.org/C2778334786","wikidata":"https://www.wikidata.org/wiki/Q1586270","display_name":"Variation (astronomy)","level":2,"score":0.5772526264190674},{"id":"https://openalex.org/C154945302","wikidata":"https://www.wikidata.org/wiki/Q11660","display_name":"Artificial intelligence","level":1,"score":0.5365453362464905},{"id":"https://openalex.org/C151020129","wikidata":"https://www.wikidata.org/wiki/Q7625067","display_name":"Structural variation","level":4,"score":0.5121974349021912},{"id":"https://openalex.org/C153180895","wikidata":"https://www.wikidata.org/wiki/Q7148389","display_name":"Pattern recognition (psychology)","level":2,"score":0.496296226978302},{"id":"https://openalex.org/C99498987","wikidata":"https://www.wikidata.org/wiki/Q2210247","display_name":"Noise (video)","level":3,"score":0.49195215106010437},{"id":"https://openalex.org/C124101348","wikidata":"https://www.wikidata.org/wiki/Q172491","display_name":"Data mining","level":1,"score":0.42470741271972656},{"id":"https://openalex.org/C141231307","wikidata":"https://www.wikidata.org/wiki/Q7020","display_name":"Genome","level":3,"score":0.3369216322898865},{"id":"https://openalex.org/C115961682","wikidata":"https://www.wikidata.org/wiki/Q860623","display_name":"Image (mathematics)","level":2,"score":0.18158823251724243},{"id":"https://openalex.org/C86803240","wikidata":"https://www.wikidata.org/wiki/Q420","display_name":"Biology","level":0,"score":0.15898925065994263},{"id":"https://openalex.org/C104317684","wikidata":"https://www.wikidata.org/wiki/Q7187","display_name":"Gene","level":2,"score":0.11944365501403809},{"id":"https://openalex.org/C54355233","wikidata":"https://www.wikidata.org/wiki/Q7162","display_name":"Genetics","level":1,"score":0.10829561948776245},{"id":"https://openalex.org/C162853370","wikidata":"https://www.wikidata.org/wiki/Q39809","display_name":"Marketing","level":1,"score":0.0},{"id":"https://openalex.org/C44870925","wikidata":"https://www.wikidata.org/wiki/Q37547","display_name":"Astrophysics","level":1,"score":0.0},{"id":"https://openalex.org/C121332964","wikidata":"https://www.wikidata.org/wiki/Q413","display_name":"Physics","level":0,"score":0.0},{"id":"https://openalex.org/C144133560","wikidata":"https://www.wikidata.org/wiki/Q4830453","display_name":"Business","level":0,"score":0.0}],"mesh":[{"descriptor_ui":"D000465","descriptor_name":"Algorithms","qualifier_ui":null,"qualifier_name":null,"is_major_topic":true},{"descriptor_ui":"D000465","descriptor_name":"Algorithms","qualifier_ui":null,"qualifier_name":null,"is_major_topic":true},{"descriptor_ui":"D000465","descriptor_name":"Algorithms","qualifier_ui":null,"qualifier_name":null,"is_major_topic":true},{"descriptor_ui":"D000465","descriptor_name":"Algorithms","qualifier_ui":null,"qualifier_name":null,"is_major_topic":true},{"descriptor_ui":"D006801","descriptor_name":"Humans","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D006801","descriptor_name":"Humans","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D006801","descriptor_name":"Humans","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D006801","descriptor_name":"Humans","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D012984","descriptor_name":"Software","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D012984","descriptor_name":"Software","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D012984","descriptor_name":"Software","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D012984","descriptor_name":"Software","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D017422","descriptor_name":"Sequence Analysis, DNA","qualifier_ui":"Q000379","qualifier_name":"methods","is_major_topic":false},{"descriptor_ui":"D017422","descriptor_name":"Sequence Analysis, DNA","qualifier_ui":"Q000379","qualifier_name":"methods","is_major_topic":false},{"descriptor_ui":"D017422","descriptor_name":"Sequence Analysis, DNA","qualifier_ui":"Q000379","qualifier_name":"methods","is_major_topic":false},{"descriptor_ui":"D017422","descriptor_name":"Sequence Analysis, DNA","qualifier_ui":"Q000379","qualifier_name":"methods","is_major_topic":false},{"descriptor_ui":"D023281","descriptor_name":"Genomics","qualifier_ui":"Q000379","qualifier_name":"methods","is_major_topic":false},{"descriptor_ui":"D023281","descriptor_name":"Genomics","qualifier_ui":"Q000379","qualifier_name":"methods","is_major_topic":false},{"descriptor_ui":"D023281","descriptor_name":"Genomics","qualifier_ui":"Q000379","qualifier_name":"methods","is_major_topic":false},{"descriptor_ui":"D023281","descriptor_name":"Genomics","qualifier_ui":"Q000379","qualifier_name":"methods","is_major_topic":false},{"descriptor_ui":"D056914","descriptor_name":"Genomic Structural Variation","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D056914","descriptor_name":"Genomic Structural Variation","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D056914","descriptor_name":"Genomic Structural Variation","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D056914","descriptor_name":"Genomic Structural Variation","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D059014","descriptor_name":"High-Throughput Nucleotide Sequencing","qualifier_ui":"Q000379","qualifier_name":"methods","is_major_topic":false},{"descriptor_ui":"D059014","descriptor_name":"High-Throughput Nucleotide Sequencing","qualifier_ui":"Q000379","qualifier_name":"methods","is_major_topic":false},{"descriptor_ui":"D059014","descriptor_name":"High-Throughput Nucleotide Sequencing","qualifier_ui":"Q000379","qualifier_name":"methods","is_major_topic":false},{"descriptor_ui":"D059014","descriptor_name":"High-Throughput Nucleotide Sequencing","qualifier_ui":"Q000379","qualifier_name":"methods","is_major_topic":false}],"locations_count":3,"locations":[{"id":"doi:10.1093/bib/bbae336","is_oa":true,"landing_page_url":"https://doi.org/10.1093/bib/bbae336","pdf_url":"https://academic.oup.com/bib/article-pdf/25/4/bbae336/58482682/bbae336.pdf","source":{"id":"https://openalex.org/S91767247","display_name":"Briefings in Bioinformatics","issn_l":"1467-5463","issn":["1467-5463","1477-4054"],"is_oa":true,"is_in_doaj":true,"is_core":true,"host_organization":"https://openalex.org/P4310311648","host_organization_name":"Oxford University Press","host_organization_lineage":["https://openalex.org/P4310311648","https://openalex.org/P4310311647"],"host_organization_lineage_names":["Oxford University Press","University of Oxford"],"type":"journal"},"license":"cc-by","license_id":"https://openalex.org/licenses/cc-by","version":"publishedVersion","is_accepted":true,"is_published":true,"raw_source_name":"Briefings in Bioinformatics","raw_type":"journal-article"},{"id":"pmid:38980375","is_oa":false,"landing_page_url":"https://pubmed.ncbi.nlm.nih.gov/38980375","pdf_url":null,"source":{"id":"https://openalex.org/S4306525036","display_name":"PubMed","issn_l":null,"issn":null,"is_oa":false,"is_in_doaj":false,"is_core":false,"host_organization":"https://openalex.org/I1299303238","host_organization_name":"National Institutes of Health","host_organization_lineage":["https://openalex.org/I1299303238"],"host_organization_lineage_names":[],"type":"repository"},"license":null,"license_id":null,"version":"publishedVersion","is_accepted":true,"is_published":true,"raw_source_name":"Briefings in bioinformatics","raw_type":null},{"id":"pmh:oai:pubmedcentral.nih.gov:11232458","is_oa":true,"landing_page_url":"https://www.ncbi.nlm.nih.gov/pmc/articles/11232458","pdf_url":"https://pmc.ncbi.nlm.nih.gov/articles/PMC11232458/pdf/bbae336.pdf","source":{"id":"https://openalex.org/S2764455111","display_name":"PubMed Central","issn_l":null,"issn":null,"is_oa":true,"is_in_doaj":false,"is_core":false,"host_organization":"https://openalex.org/I1299303238","host_organization_name":"National Institutes of Health","host_organization_lineage":["https://openalex.org/I1299303238"],"host_organization_lineage_names":[],"type":"repository"},"license":"cc-by","license_id":"https://openalex.org/licenses/cc-by","version":"submittedVersion","is_accepted":false,"is_published":false,"raw_source_name":"Brief Bioinform","raw_type":"Text"}],"best_oa_location":{"id":"doi:10.1093/bib/bbae336","is_oa":true,"landing_page_url":"https://doi.org/10.1093/bib/bbae336","pdf_url":"https://academic.oup.com/bib/article-pdf/25/4/bbae336/58482682/bbae336.pdf","source":{"id":"https://openalex.org/S91767247","display_name":"Briefings in Bioinformatics","issn_l":"1467-5463","issn":["1467-5463","1477-4054"],"is_oa":true,"is_in_doaj":true,"is_core":true,"host_organization":"https://openalex.org/P4310311648","host_organization_name":"Oxford University Press","host_organization_lineage":["https://openalex.org/P4310311648","https://openalex.org/P4310311647"],"host_organization_lineage_names":["Oxford University Press","University of Oxford"],"type":"journal"},"license":"cc-by","license_id":"https://openalex.org/licenses/cc-by","version":"publishedVersion","is_accepted":true,"is_published":true,"raw_source_name":"Briefings in Bioinformatics","raw_type":"journal-article"},"sustainable_development_goals":[],"awards":[{"id":"https://openalex.org/G1073654070","display_name":null,"funder_award_id":"62172129","funder_id":"https://openalex.org/F4320321001","funder_display_name":"National Natural Science Foundation of China"},{"id":"https://openalex.org/G1719162086","display_name":null,"funder_award_id":"2022YFF1202101","funder_id":"https://openalex.org/F4320335777","funder_display_name":"National Key Research and Development Program of China"},{"id":"https://openalex.org/G870551797","display_name":null,"funder_award_id":"62225109","funder_id":"https://openalex.org/F4320321001","funder_display_name":"National Natural Science Foundation of China"}],"funders":[{"id":"https://openalex.org/F4320321001","display_name":"National Natural Science Foundation of China","ror":"https://ror.org/01h0zpd94"},{"id":"https://openalex.org/F4320335777","display_name":"National Key Research and Development Program of China","ror":null}],"has_content":{"grobid_xml":false,"pdf":true},"content_urls":{"pdf":"https://content.openalex.org/works/W4400457192.pdf"},"referenced_works_count":48,"referenced_works":["https://openalex.org/W1969271586","https://openalex.org/W2011957420","https://openalex.org/W2022316530","https://openalex.org/W2031313639","https://openalex.org/W2061008984","https://openalex.org/W2159715390","https://openalex.org/W2550586733","https://openalex.org/W2582800429","https://openalex.org/W2779975541","https://openalex.org/W2800434159","https://openalex.org/W2919337517","https://openalex.org/W2925568938","https://openalex.org/W2950121474","https://openalex.org/W2951764279","https://openalex.org/W2968499116","https://openalex.org/W2990344913","https://openalex.org/W3004584205","https://openalex.org/W3005469082","https://openalex.org/W3022783334","https://openalex.org/W3026616767","https://openalex.org/W3034581902","https://openalex.org/W3036928921","https://openalex.org/W3040639338","https://openalex.org/W3046401484","https://openalex.org/W3088711112","https://openalex.org/W3112640289","https://openalex.org/W3130788486","https://openalex.org/W3162917414","https://openalex.org/W3164211868","https://openalex.org/W4210887696","https://openalex.org/W4225799922","https://openalex.org/W4231539689","https://openalex.org/W4293770091","https://openalex.org/W4295896785","https://openalex.org/W4311363347","https://openalex.org/W4312113735","https://openalex.org/W4313250582","https://openalex.org/W4317034776","https://openalex.org/W4323311619","https://openalex.org/W4360612418","https://openalex.org/W4360612424","https://openalex.org/W4390500910","https://openalex.org/W4392089907","https://openalex.org/W4393201027","https://openalex.org/W6729804952","https://openalex.org/W6842306481","https://openalex.org/W6860299973","https://openalex.org/W6862754676"],"related_works":["https://openalex.org/W4238897586","https://openalex.org/W435179959","https://openalex.org/W2619091065","https://openalex.org/W2059640416","https://openalex.org/W1490753184","https://openalex.org/W2284465472","https://openalex.org/W2043074282","https://openalex.org/W2203319208","https://openalex.org/W3193218983","https://openalex.org/W4306698144"],"abstract_inverted_index":{"Structural":[0],"variation":[1,9],"(SV)":[2],"is":[3],"an":[4,67],"important":[5],"form":[6],"of":[7,20,44,77],"genomic":[8,130],"that":[10,59],"influences":[11],"gene":[12],"function":[13],"and":[14,66,92,116,126],"expression":[15],"by":[16],"altering":[17],"the":[18,21,75],"structure":[19],"genome.":[22],"Although":[23],"long-read":[24,37,52],"data":[25,38],"have":[26],"been":[27],"proven":[28],"to":[29,103,128],"better":[30],"characterize":[31],"SVs,":[32],"SVs":[33,50],"detected":[34],"from":[35,82],"noisy":[36],"still":[39],"include":[40],"a":[41,57,61],"considerable":[42],"portion":[43],"false-positive":[45,78],"calls.":[46],"To":[47],"accurately":[48],"detect":[49],"in":[51],"data,":[53],"we":[54],"present":[55],"SVDF,":[56],"method":[58],"employs":[60],"learning-based":[62],"noise":[63],"filtering":[64],"strategy":[65],"SV":[68,107,118],"signature-adaptive":[69],"clustering":[70],"algorithm,":[71],"for":[72,99],"effectively":[73],"reducing":[74],"likelihood":[76],"events.":[79],"Benchmarking":[80],"results":[81],"multiple":[83],"orthogonal":[84],"experiments":[85],"demonstrate":[86],"that,":[87,112],"across":[88],"different":[89],"sequencing":[90],"platforms":[91],"depths,":[93],"SVDF":[94,121],"achieves":[95],"higher":[96],"calling":[97,108],"accuracy":[98],"each":[100],"sample":[101],"compared":[102],"several":[104],"existing":[105],"general":[106],"tools.":[109],"We":[110],"believe":[111],"with":[113],"its":[114],"meticulous":[115],"sensitive":[117],"detection":[119],"capability,":[120],"can":[122],"bring":[123],"new":[124],"opportunities":[125],"advancements":[127],"cutting-edge":[129],"research.":[131]},"counts_by_year":[{"year":2025,"cited_by_count":6}],"updated_date":"2025-11-06T03:46:38.306776","created_date":"2025-10-10T00:00:00"}