{"id":"https://openalex.org/W4394853912","doi":"https://doi.org/10.1093/bib/bbae169","title":"Fuzzy kernel evidence Random Forest for identifying pseudouridine sites","display_name":"Fuzzy kernel evidence Random Forest for identifying pseudouridine sites","publication_year":2024,"publication_date":"2024-03-27","ids":{"openalex":"https://openalex.org/W4394853912","doi":"https://doi.org/10.1093/bib/bbae169","pmid":"https://pubmed.ncbi.nlm.nih.gov/38622357"},"language":"en","primary_location":{"id":"doi:10.1093/bib/bbae169","is_oa":true,"landing_page_url":"https://doi.org/10.1093/bib/bbae169","pdf_url":"https://academic.oup.com/bib/article-pdf/25/3/bbae169/57235620/bbae169.pdf","source":{"id":"https://openalex.org/S91767247","display_name":"Briefings in Bioinformatics","issn_l":"1467-5463","issn":["1467-5463","1477-4054"],"is_oa":true,"is_in_doaj":true,"is_core":true,"host_organization":"https://openalex.org/P4310311648","host_organization_name":"Oxford University Press","host_organization_lineage":["https://openalex.org/P4310311648","https://openalex.org/P4310311647"],"host_organization_lineage_names":["Oxford University Press","University of Oxford"],"type":"journal"},"license":"cc-by","license_id":"https://openalex.org/licenses/cc-by","version":"publishedVersion","is_accepted":true,"is_published":true,"raw_source_name":"Briefings in Bioinformatics","raw_type":"journal-article"},"type":"article","indexed_in":["crossref","doaj","pubmed"],"open_access":{"is_oa":true,"oa_status":"gold","oa_url":"https://academic.oup.com/bib/article-pdf/25/3/bbae169/57235620/bbae169.pdf","any_repository_has_fulltext":true},"authorships":[{"author_position":"first","author":{"id":"https://openalex.org/A5114832363","display_name":"Mingshuai Chen","orcid":"https://orcid.org/0009-0003-1499-6590"},"institutions":[{"id":"https://openalex.org/I150229711","display_name":"University of Electronic Science and Technology of China","ror":"https://ror.org/04qr3zq92","country_code":"CN","type":"education","lineage":["https://openalex.org/I150229711"]},{"id":"https://openalex.org/I4210123686","display_name":"Quzhou University","ror":"https://ror.org/024nfx323","country_code":"CN","type":"education","lineage":["https://openalex.org/I4210123686"]}],"countries":["CN"],"is_corresponding":false,"raw_author_name":"Mingshuai Chen","raw_affiliation_strings":["Institute of Fundamental and Frontier Sciences, University of Electronic Science and Technology of China , Chengdu 611731 , China","Yangtze Delta Region Institute (Quzhou), University of Electronic Science and Technology of China , Quzhou 324003 , China"],"raw_orcid":null,"affiliations":[{"raw_affiliation_string":"Institute of Fundamental and Frontier Sciences, University of Electronic Science and Technology of China , Chengdu 611731 , China","institution_ids":["https://openalex.org/I150229711"]},{"raw_affiliation_string":"Yangtze Delta Region Institute (Quzhou), University of Electronic Science and Technology of China , Quzhou 324003 , China","institution_ids":["https://openalex.org/I150229711","https://openalex.org/I4210123686"]}]},{"author_position":"middle","author":{"id":"https://openalex.org/A5064067946","display_name":"Mingai Sun","orcid":null},"institutions":[],"countries":[],"is_corresponding":false,"raw_author_name":"Mingai Sun","raw_affiliation_strings":["Beidahuang Industry Group General Hospital , Harbin 150001 , China"],"raw_orcid":null,"affiliations":[{"raw_affiliation_string":"Beidahuang Industry Group General Hospital , Harbin 150001 , China","institution_ids":[]}]},{"author_position":"middle","author":{"id":"https://openalex.org/A5081124399","display_name":"Xi Su","orcid":"https://orcid.org/0000-0003-3235-8114"},"institutions":[{"id":"https://openalex.org/I4210098387","display_name":"Foshan Maternity and Child Health Care Hospital","ror":"https://ror.org/00rg8e315","country_code":"CN","type":"healthcare","lineage":["https://openalex.org/I4210098387"]}],"countries":["CN"],"is_corresponding":false,"raw_author_name":"Xi Su","raw_affiliation_strings":["Foshan Women and Children Hospital , Foshan 528000 , China"],"raw_orcid":null,"affiliations":[{"raw_affiliation_string":"Foshan Women and Children Hospital , Foshan 528000 , China","institution_ids":["https://openalex.org/I4210098387"]}]},{"author_position":"middle","author":{"id":"https://openalex.org/A5082046789","display_name":"Prayag Tiwari","orcid":"https://orcid.org/0000-0002-2851-4260"},"institutions":[{"id":"https://openalex.org/I746986","display_name":"Halmstad University","ror":"https://ror.org/03h0qfp10","country_code":"SE","type":"education","lineage":["https://openalex.org/I746986"]}],"countries":["SE"],"is_corresponding":true,"raw_author_name":"Prayag Tiwari","raw_affiliation_strings":["School of Information Technology, Halmstad University , Sweden"],"raw_orcid":null,"affiliations":[{"raw_affiliation_string":"School of Information Technology, Halmstad University , Sweden","institution_ids":["https://openalex.org/I746986"]}]},{"author_position":"last","author":{"id":"https://openalex.org/A5100688233","display_name":"Yijie Ding","orcid":"https://orcid.org/0000-0003-2911-7643"},"institutions":[{"id":"https://openalex.org/I150229711","display_name":"University of Electronic Science and Technology of China","ror":"https://ror.org/04qr3zq92","country_code":"CN","type":"education","lineage":["https://openalex.org/I150229711"]},{"id":"https://openalex.org/I4210123686","display_name":"Quzhou University","ror":"https://ror.org/024nfx323","country_code":"CN","type":"education","lineage":["https://openalex.org/I4210123686"]}],"countries":["CN"],"is_corresponding":true,"raw_author_name":"Yijie Ding","raw_affiliation_strings":["Yangtze Delta Region Institute (Quzhou), University of Electronic Science and Technology of China , Quzhou 324003 , China"],"raw_orcid":null,"affiliations":[{"raw_affiliation_string":"Yangtze Delta Region Institute (Quzhou), University of Electronic Science and Technology of China , Quzhou 324003 , China","institution_ids":["https://openalex.org/I150229711","https://openalex.org/I4210123686"]}]}],"institutions":[],"countries_distinct_count":2,"institutions_distinct_count":4,"corresponding_author_ids":["https://openalex.org/A5082046789","https://openalex.org/A5100688233"],"corresponding_institution_ids":["https://openalex.org/I150229711","https://openalex.org/I4210123686","https://openalex.org/I746986"],"apc_list":{"value":4011,"currency":"USD","value_usd":4011},"apc_paid":{"value":4011,"currency":"USD","value_usd":4011},"fwci":0.4939,"has_fulltext":true,"cited_by_count":3,"citation_normalized_percentile":{"value":0.59910939,"is_in_top_1_percent":false,"is_in_top_10_percent":false},"cited_by_percentile_year":{"min":90,"max":97},"biblio":{"volume":"25","issue":"3","first_page":null,"last_page":null},"is_retracted":false,"is_paratext":false,"is_xpac":false,"primary_topic":{"id":"https://openalex.org/T12254","display_name":"Machine Learning in Bioinformatics","score":0.9832000136375427,"subfield":{"id":"https://openalex.org/subfields/1312","display_name":"Molecular Biology"},"field":{"id":"https://openalex.org/fields/13","display_name":"Biochemistry, Genetics and Molecular Biology"},"domain":{"id":"https://openalex.org/domains/1","display_name":"Life Sciences"}},"topics":[{"id":"https://openalex.org/T12254","display_name":"Machine Learning in Bioinformatics","score":0.9832000136375427,"subfield":{"id":"https://openalex.org/subfields/1312","display_name":"Molecular Biology"},"field":{"id":"https://openalex.org/fields/13","display_name":"Biochemistry, Genetics and Molecular Biology"},"domain":{"id":"https://openalex.org/domains/1","display_name":"Life Sciences"}},{"id":"https://openalex.org/T10515","display_name":"Cancer-related molecular mechanisms research","score":0.9451000094413757,"subfield":{"id":"https://openalex.org/subfields/1306","display_name":"Cancer Research"},"field":{"id":"https://openalex.org/fields/13","display_name":"Biochemistry, Genetics and Molecular Biology"},"domain":{"id":"https://openalex.org/domains/1","display_name":"Life Sciences"}},{"id":"https://openalex.org/T11512","display_name":"Anomaly Detection Techniques and Applications","score":0.9110000133514404,"subfield":{"id":"https://openalex.org/subfields/1702","display_name":"Artificial Intelligence"},"field":{"id":"https://openalex.org/fields/17","display_name":"Computer Science"},"domain":{"id":"https://openalex.org/domains/3","display_name":"Physical Sciences"}}],"keywords":[{"id":"https://openalex.org/keywords/random-forest","display_name":"Random forest","score":0.8739364147186279},{"id":"https://openalex.org/keywords/pseudouridine","display_name":"Pseudouridine","score":0.7016064524650574},{"id":"https://openalex.org/keywords/computer-science","display_name":"Computer science","score":0.4864215850830078},{"id":"https://openalex.org/keywords/artificial-intelligence","display_name":"Artificial intelligence","score":0.46085280179977417},{"id":"https://openalex.org/keywords/kernel","display_name":"Kernel (algebra)","score":0.4364597201347351},{"id":"https://openalex.org/keywords/computational-biology","display_name":"Computational biology","score":0.37609174847602844},{"id":"https://openalex.org/keywords/mathematics","display_name":"Mathematics","score":0.27455058693885803},{"id":"https://openalex.org/keywords/biology","display_name":"Biology","score":0.20535922050476074},{"id":"https://openalex.org/keywords/genetics","display_name":"Genetics","score":0.1110820472240448},{"id":"https://openalex.org/keywords/combinatorics","display_name":"Combinatorics","score":0.0831444263458252},{"id":"https://openalex.org/keywords/gene","display_name":"Gene","score":0.056725144386291504}],"concepts":[{"id":"https://openalex.org/C169258074","wikidata":"https://www.wikidata.org/wiki/Q245748","display_name":"Random forest","level":2,"score":0.8739364147186279},{"id":"https://openalex.org/C2779810333","wikidata":"https://www.wikidata.org/wiki/Q420445","display_name":"Pseudouridine","level":5,"score":0.7016064524650574},{"id":"https://openalex.org/C41008148","wikidata":"https://www.wikidata.org/wiki/Q21198","display_name":"Computer science","level":0,"score":0.4864215850830078},{"id":"https://openalex.org/C154945302","wikidata":"https://www.wikidata.org/wiki/Q11660","display_name":"Artificial intelligence","level":1,"score":0.46085280179977417},{"id":"https://openalex.org/C74193536","wikidata":"https://www.wikidata.org/wiki/Q574844","display_name":"Kernel (algebra)","level":2,"score":0.4364597201347351},{"id":"https://openalex.org/C70721500","wikidata":"https://www.wikidata.org/wiki/Q177005","display_name":"Computational biology","level":1,"score":0.37609174847602844},{"id":"https://openalex.org/C33923547","wikidata":"https://www.wikidata.org/wiki/Q395","display_name":"Mathematics","level":0,"score":0.27455058693885803},{"id":"https://openalex.org/C86803240","wikidata":"https://www.wikidata.org/wiki/Q420","display_name":"Biology","level":0,"score":0.20535922050476074},{"id":"https://openalex.org/C54355233","wikidata":"https://www.wikidata.org/wiki/Q7162","display_name":"Genetics","level":1,"score":0.1110820472240448},{"id":"https://openalex.org/C114614502","wikidata":"https://www.wikidata.org/wiki/Q76592","display_name":"Combinatorics","level":1,"score":0.0831444263458252},{"id":"https://openalex.org/C104317684","wikidata":"https://www.wikidata.org/wiki/Q7187","display_name":"Gene","level":2,"score":0.056725144386291504},{"id":"https://openalex.org/C2781259782","wikidata":"https://www.wikidata.org/wiki/Q422573","display_name":"Uridine","level":4,"score":0.0},{"id":"https://openalex.org/C67705224","wikidata":"https://www.wikidata.org/wiki/Q11053","display_name":"RNA","level":3,"score":0.0}],"mesh":[{"descriptor_ui":"D000093743","descriptor_name":"Random Forest","qualifier_ui":null,"qualifier_name":null,"is_major_topic":true},{"descriptor_ui":"D000093743","descriptor_name":"Random Forest","qualifier_ui":null,"qualifier_name":null,"is_major_topic":true},{"descriptor_ui":"D000093743","descriptor_name":"Random Forest","qualifier_ui":null,"qualifier_name":null,"is_major_topic":true},{"descriptor_ui":"D000093743","descriptor_name":"Random Forest","qualifier_ui":null,"qualifier_name":null,"is_major_topic":true},{"descriptor_ui":"D000093743","descriptor_name":"Random Forest","qualifier_ui":null,"qualifier_name":null,"is_major_topic":true},{"descriptor_ui":"D000093743","descriptor_name":"Random Forest","qualifier_ui":null,"qualifier_name":null,"is_major_topic":true},{"descriptor_ui":"D001483","descriptor_name":"Base Sequence","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D001483","descriptor_name":"Base Sequence","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D001483","descriptor_name":"Base Sequence","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D001483","descriptor_name":"Base Sequence","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D001483","descriptor_name":"Base Sequence","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D001483","descriptor_name":"Base Sequence","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D011560","descriptor_name":"Pseudouridine","qualifier_ui":"Q000235","qualifier_name":"genetics","is_major_topic":true},{"descriptor_ui":"D011560","descriptor_name":"Pseudouridine","qualifier_ui":"Q000235","qualifier_name":"genetics","is_major_topic":true},{"descriptor_ui":"D011560","descriptor_name":"Pseudouridine","qualifier_ui":"Q000235","qualifier_name":"genetics","is_major_topic":true},{"descriptor_ui":"D011560","descriptor_name":"Pseudouridine","qualifier_ui":"Q000235","qualifier_name":"genetics","is_major_topic":true},{"descriptor_ui":"D011560","descriptor_name":"Pseudouridine","qualifier_ui":"Q000235","qualifier_name":"genetics","is_major_topic":true},{"descriptor_ui":"D011560","descriptor_name":"Pseudouridine","qualifier_ui":"Q000235","qualifier_name":"genetics","is_major_topic":true},{"descriptor_ui":"D012313","descriptor_name":"RNA","qualifier_ui":"Q000235","qualifier_name":"genetics","is_major_topic":false},{"descriptor_ui":"D012313","descriptor_name":"RNA","qualifier_ui":"Q000235","qualifier_name":"genetics","is_major_topic":false},{"descriptor_ui":"D012313","descriptor_name":"RNA","qualifier_ui":"Q000235","qualifier_name":"genetics","is_major_topic":false},{"descriptor_ui":"D012313","descriptor_name":"RNA","qualifier_ui":"Q000235","qualifier_name":"genetics","is_major_topic":false},{"descriptor_ui":"D012313","descriptor_name":"RNA","qualifier_ui":"Q000235","qualifier_name":"genetics","is_major_topic":false},{"descriptor_ui":"D012313","descriptor_name":"RNA","qualifier_ui":"Q000235","qualifier_name":"genetics","is_major_topic":false}],"locations_count":3,"locations":[{"id":"doi:10.1093/bib/bbae169","is_oa":true,"landing_page_url":"https://doi.org/10.1093/bib/bbae169","pdf_url":"https://academic.oup.com/bib/article-pdf/25/3/bbae169/57235620/bbae169.pdf","source":{"id":"https://openalex.org/S91767247","display_name":"Briefings in Bioinformatics","issn_l":"1467-5463","issn":["1467-5463","1477-4054"],"is_oa":true,"is_in_doaj":true,"is_core":true,"host_organization":"https://openalex.org/P4310311648","host_organization_name":"Oxford University Press","host_organization_lineage":["https://openalex.org/P4310311648","https://openalex.org/P4310311647"],"host_organization_lineage_names":["Oxford University Press","University of Oxford"],"type":"journal"},"license":"cc-by","license_id":"https://openalex.org/licenses/cc-by","version":"publishedVersion","is_accepted":true,"is_published":true,"raw_source_name":"Briefings in Bioinformatics","raw_type":"journal-article"},{"id":"pmid:38622357","is_oa":false,"landing_page_url":"https://pubmed.ncbi.nlm.nih.gov/38622357","pdf_url":null,"source":{"id":"https://openalex.org/S4306525036","display_name":"PubMed","issn_l":null,"issn":null,"is_oa":false,"is_in_doaj":false,"is_core":false,"host_organization":"https://openalex.org/I1299303238","host_organization_name":"National Institutes of Health","host_organization_lineage":["https://openalex.org/I1299303238"],"host_organization_lineage_names":[],"type":"repository"},"license":null,"license_id":null,"version":"publishedVersion","is_accepted":true,"is_published":true,"raw_source_name":"Briefings in bioinformatics","raw_type":null},{"id":"pmh:oai:pubmedcentral.nih.gov:11018548","is_oa":true,"landing_page_url":"https://www.ncbi.nlm.nih.gov/pmc/articles/11018548","pdf_url":"https://pmc.ncbi.nlm.nih.gov/articles/PMC11018548/pdf/bbae169.pdf","source":{"id":"https://openalex.org/S2764455111","display_name":"PubMed Central","issn_l":null,"issn":null,"is_oa":true,"is_in_doaj":false,"is_core":false,"host_organization":"https://openalex.org/I1299303238","host_organization_name":"National Institutes of Health","host_organization_lineage":["https://openalex.org/I1299303238"],"host_organization_lineage_names":[],"type":"repository"},"license":"cc-by","license_id":"https://openalex.org/licenses/cc-by","version":"submittedVersion","is_accepted":false,"is_published":false,"raw_source_name":"Brief Bioinform","raw_type":"Text"}],"best_oa_location":{"id":"doi:10.1093/bib/bbae169","is_oa":true,"landing_page_url":"https://doi.org/10.1093/bib/bbae169","pdf_url":"https://academic.oup.com/bib/article-pdf/25/3/bbae169/57235620/bbae169.pdf","source":{"id":"https://openalex.org/S91767247","display_name":"Briefings in Bioinformatics","issn_l":"1467-5463","issn":["1467-5463","1477-4054"],"is_oa":true,"is_in_doaj":true,"is_core":true,"host_organization":"https://openalex.org/P4310311648","host_organization_name":"Oxford University Press","host_organization_lineage":["https://openalex.org/P4310311648","https://openalex.org/P4310311647"],"host_organization_lineage_names":["Oxford University Press","University of Oxford"],"type":"journal"},"license":"cc-by","license_id":"https://openalex.org/licenses/cc-by","version":"publishedVersion","is_accepted":true,"is_published":true,"raw_source_name":"Briefings in Bioinformatics","raw_type":"journal-article"},"sustainable_development_goals":[{"id":"https://metadata.un.org/sdg/3","display_name":"Good health and well-being","score":0.5400000214576721}],"awards":[{"id":"https://openalex.org/G2204089524","display_name":null,"funder_award_id":"LY23F020003","funder_id":"https://openalex.org/F4320321001","funder_display_name":"National Natural Science Foundation of China"},{"id":"https://openalex.org/G2245046682","display_name":null,"funder_award_id":"U22A2038","funder_id":"https://openalex.org/F4320321001","funder_display_name":"National Natural Science Foundation of China"},{"id":"https://openalex.org/G2656599839","display_name":null,"funder_award_id":"32270786","funder_id":"https://openalex.org/F4320321001","funder_display_name":"National Natural Science Foundation of China"},{"id":"https://openalex.org/G4141758315","display_name":"\u57fa\u4e8e\u6df1\u5ea6\u591a\u6838\u5b66\u4e60\u6846\u67b6\u7684\u591a\u6a21\u6001\u836f\u7269\u526f\u4f5c\u7528\u8bc6\u522b\u65b9\u6cd5\u7814\u7a76","funder_award_id":"LY23F020003","funder_id":"https://openalex.org/F4320338464","funder_display_name":"Natural Science Foundation of Zhejiang Province"},{"id":"https://openalex.org/G7037578608","display_name":null,"funder_award_id":"62172076","funder_id":"https://openalex.org/F4320321001","funder_display_name":"National Natural Science Foundation of China"}],"funders":[{"id":"https://openalex.org/F4320321001","display_name":"National Natural Science Foundation of China","ror":"https://ror.org/01h0zpd94"},{"id":"https://openalex.org/F4320338464","display_name":"Natural Science Foundation of Zhejiang Province","ror":"https://ror.org/01h0zpd94"}],"has_content":{"pdf":true,"grobid_xml":false},"content_urls":{"pdf":"https://content.openalex.org/works/W4394853912.pdf"},"referenced_works_count":64,"referenced_works":["https://openalex.org/W1875028359","https://openalex.org/W1947267113","https://openalex.org/W1993853885","https://openalex.org/W2008121312","https://openalex.org/W2012372842","https://openalex.org/W2065898700","https://openalex.org/W2077345777","https://openalex.org/W2080404350","https://openalex.org/W2085928743","https://openalex.org/W2117079761","https://openalex.org/W2139691165","https://openalex.org/W2161890613","https://openalex.org/W2177612949","https://openalex.org/W2398196955","https://openalex.org/W2598495276","https://openalex.org/W2888906255","https://openalex.org/W2900694973","https://openalex.org/W2937997287","https://openalex.org/W2949685204","https://openalex.org/W2963803440","https://openalex.org/W2965901104","https://openalex.org/W2967960129","https://openalex.org/W2969768983","https://openalex.org/W2972223935","https://openalex.org/W3008014363","https://openalex.org/W3012685647","https://openalex.org/W3020045074","https://openalex.org/W3042737386","https://openalex.org/W3043901899","https://openalex.org/W3102385171","https://openalex.org/W3121961049","https://openalex.org/W3125843200","https://openalex.org/W3134163647","https://openalex.org/W3176821806","https://openalex.org/W3179652920","https://openalex.org/W3203741962","https://openalex.org/W3207672631","https://openalex.org/W3210918865","https://openalex.org/W3211450563","https://openalex.org/W4200268969","https://openalex.org/W4226113632","https://openalex.org/W4226149298","https://openalex.org/W4281249267","https://openalex.org/W4285492639","https://openalex.org/W4301347335","https://openalex.org/W4304084100","https://openalex.org/W4306404289","https://openalex.org/W4308370073","https://openalex.org/W4310675782","https://openalex.org/W4318392954","https://openalex.org/W4319982435","https://openalex.org/W4321015480","https://openalex.org/W4324309277","https://openalex.org/W4366826010","https://openalex.org/W4379115199","https://openalex.org/W4381432349","https://openalex.org/W4383558530","https://openalex.org/W4385252548","https://openalex.org/W4388080288","https://openalex.org/W4403782367","https://openalex.org/W6735888752","https://openalex.org/W6789134440","https://openalex.org/W6804893875","https://openalex.org/W6855358507"],"related_works":["https://openalex.org/W3154348607","https://openalex.org/W4385827749","https://openalex.org/W1133247269","https://openalex.org/W2136426050","https://openalex.org/W4388307769","https://openalex.org/W2788233212","https://openalex.org/W2064232610","https://openalex.org/W2465059376","https://openalex.org/W2937997287","https://openalex.org/W3008014363"],"abstract_inverted_index":{"Pseudouridine":[0],"is":[1,6,44,83],"an":[2],"RNA":[3,63,95,103],"modification":[4],"that":[5,51,144,165],"widely":[7],"distributed":[8],"in":[9,19,90,149,200],"both":[10],"prokaryotes":[11],"and":[12,14,41,54,114,157,196],"eukaryotes,":[13],"plays":[15],"a":[16,45,190],"critical":[17],"role":[18],"numerous":[20],"biological":[21],"activities.":[22],"Despite":[23],"its":[24],"importance,":[25],"the":[26,119,135,181,201],"precise":[27],"identification":[28],"of":[29,62,183],"pseudouridine":[30,57,79,92,184],"sites":[31,58,93],"through":[32],"experimental":[33],"approaches":[34],"poses":[35],"significant":[36],"challenges,":[37],"requiring":[38],"substantial":[39],"time":[40],"resources.Therefore,":[42],"there":[43],"growing":[46],"need":[47],"for":[48,111,124,151,193],"computational":[49],"techniques":[50],"can":[52],"reliably":[53],"quickly":[55],"identify":[56,78],"from":[59,94],"vast":[60],"amounts":[61],"sequencing":[64,96],"data.":[65,97],"In":[66],"this":[67],"study,":[68],"we":[69],"propose":[70],"fuzzy":[71,131],"kernel":[72,142],"evidence":[73],"Random":[74],"Forest":[75],"(FKeERF)":[76],"to":[77,133,147],"sites.":[80],"This":[81,175],"method":[82,123,177],"called":[84],"PseU-FKeERF,":[85],"which":[86],"demonstrates":[87],"high":[88],"accuracy":[89,182],"identifying":[91],"The":[98],"PseU-FKeERF":[99,166],"model":[100],"selected":[101],"four":[102],"feature":[104,112,137],"coding":[105],"schemes":[106],"with":[107],"relatively":[108],"good":[109],"performance":[110,170],"combination,":[113],"then":[115],"input":[116],"them":[117],"into":[118],"newly":[120],"proposed":[121],"FKeERF":[122,127],"category":[125,152],"prediction.":[126,153],"not":[128,178],"only":[129,179],"uses":[130],"logic":[132],"expand":[134],"original":[136],"space,":[138],"but":[139,187],"also":[140,188],"combines":[141],"methods":[143],"are":[145],"easy":[146],"interpret":[148],"general":[150],"Both":[154],"cross-validation":[155],"tests":[156,159],"independent":[158],"on":[160],"benchmark":[161],"datasets":[162],"have":[163],"shown":[164],"has":[167],"better":[168],"predictive":[169],"than":[171],"several":[172],"state-of-the-art":[173],"methods.":[174],"new":[176],"improves":[180],"site":[185],"identification,":[186],"provides":[189],"certain":[191],"reference":[192],"disease":[194],"control":[195],"related":[197],"drug":[198],"development":[199],"future.":[202]},"counts_by_year":[{"year":2026,"cited_by_count":1},{"year":2025,"cited_by_count":1},{"year":2024,"cited_by_count":1}],"updated_date":"2026-07-22T07:51:19.307946","created_date":"2025-10-10T00:00:00"}
