{"id":"https://openalex.org/W4394735397","doi":"https://doi.org/10.1093/bib/bbae161","title":"KDGene: knowledge graph completion for disease gene prediction using interactional tensor decomposition","display_name":"KDGene: knowledge graph completion for disease gene prediction using interactional tensor decomposition","publication_year":2024,"publication_date":"2024-03-27","ids":{"openalex":"https://openalex.org/W4394735397","doi":"https://doi.org/10.1093/bib/bbae161","pmid":"https://pubmed.ncbi.nlm.nih.gov/38605639"},"language":"en","primary_location":{"id":"doi:10.1093/bib/bbae161","is_oa":true,"landing_page_url":"https://doi.org/10.1093/bib/bbae161","pdf_url":"https://academic.oup.com/bib/article-pdf/25/3/bbae161/57215907/bbae161.pdf","source":{"id":"https://openalex.org/S91767247","display_name":"Briefings in Bioinformatics","issn_l":"1467-5463","issn":["1467-5463","1477-4054"],"is_oa":true,"is_in_doaj":true,"is_core":true,"host_organization":"https://openalex.org/P4310311648","host_organization_name":"Oxford University Press","host_organization_lineage":["https://openalex.org/P4310311648","https://openalex.org/P4310311647"],"host_organization_lineage_names":["Oxford University Press","University of Oxford"],"type":"journal"},"license":"cc-by","license_id":"https://openalex.org/licenses/cc-by","version":"publishedVersion","is_accepted":true,"is_published":true,"raw_source_name":"Briefings in Bioinformatics","raw_type":"journal-article"},"type":"article","indexed_in":["crossref","doaj","pubmed"],"open_access":{"is_oa":true,"oa_status":"gold","oa_url":"https://academic.oup.com/bib/article-pdf/25/3/bbae161/57215907/bbae161.pdf","any_repository_has_fulltext":true},"authorships":[{"author_position":"first","author":{"id":"https://openalex.org/A5100410977","display_name":"Xinyan Wang","orcid":"https://orcid.org/0000-0002-3690-2335"},"institutions":[{"id":"https://openalex.org/I21193070","display_name":"Beijing Jiaotong University","ror":"https://ror.org/01yj56c84","country_code":"CN","type":"education","lineage":["https://openalex.org/I21193070"]},{"id":"https://openalex.org/I4210147617","display_name":"Ministry of Education","ror":"https://ror.org/0429te836","country_code":"ET","type":"government","lineage":["https://openalex.org/I4210147617"]}],"countries":["CN","ET"],"is_corresponding":true,"raw_author_name":"Xinyan Wang","raw_affiliation_strings":["Lab of Traffic Data Analysis and Mining, School of Computer Science & Technology, Beijing Jiaotong University","Laboratory of Carcinogenesis and Translational Research (Ministry of Education), Peking University Cancer Hospital & Institute","Institute of Medical Intelligence, Beijing Key Lab of Traffic Data Analysis and Mining, School of Computer Science & Technology, Beijing Jiaotong University","Beijing Jiaotong University","Institute of Medical Intelligence, Beijing Key Lab of Traffic Data Analysis and Mining, School of Computer Science & Technology, Beijing Jiaotong University, Beijing 100044, China","Beijing Key Lab of Traffic Data Analysis and Mining, School of Computer Science & Technology, Beijing Jiaotong University"],"raw_orcid":null,"affiliations":[{"raw_affiliation_string":"Lab of Traffic Data Analysis and Mining, School of Computer Science & Technology, Beijing Jiaotong University","institution_ids":["https://openalex.org/I21193070"]},{"raw_affiliation_string":"Laboratory of Carcinogenesis and Translational Research (Ministry of Education), Peking University Cancer Hospital & Institute","institution_ids":["https://openalex.org/I4210147617"]},{"raw_affiliation_string":"Institute of Medical Intelligence, Beijing Key Lab of Traffic Data Analysis and Mining, School of Computer Science & Technology, Beijing Jiaotong University","institution_ids":["https://openalex.org/I21193070"]},{"raw_affiliation_string":"Beijing Jiaotong University","institution_ids":["https://openalex.org/I21193070"]},{"raw_affiliation_string":"Institute of Medical Intelligence, Beijing Key Lab of Traffic Data Analysis and Mining, School of Computer Science & Technology, Beijing Jiaotong University, Beijing 100044, China","institution_ids":["https://openalex.org/I21193070"]},{"raw_affiliation_string":"Beijing Key Lab of Traffic Data Analysis and Mining, School of Computer Science & Technology, Beijing Jiaotong University","institution_ids":["https://openalex.org/I21193070"]}]},{"author_position":"middle","author":{"id":"https://openalex.org/A5051184139","display_name":"Kuo Yang","orcid":"https://orcid.org/0000-0003-0736-4512"},"institutions":[{"id":"https://openalex.org/I21193070","display_name":"Beijing Jiaotong University","ror":"https://ror.org/01yj56c84","country_code":"CN","type":"education","lineage":["https://openalex.org/I21193070"]},{"id":"https://openalex.org/I4210147617","display_name":"Ministry of Education","ror":"https://ror.org/0429te836","country_code":"ET","type":"government","lineage":["https://openalex.org/I4210147617"]}],"countries":["CN","ET"],"is_corresponding":false,"raw_author_name":"Kuo Yang","raw_affiliation_strings":["Institute of Medical Intelligence, Beijing Key Lab of Traffic Data Analysis and Mining, School of Computer Science & Technology, Beijing Jiaotong University","Institute of Medical Intelligence, Beijing Key Lab of Traffic Data Analysis and Mining, School of Computer Science & Technology, Beijing Jiaotong University, Beijing 100044, China","Laboratory of Carcinogenesis and Translational Research (Ministry of Education), Peking University Cancer Hospital & Institute","Lab of Traffic Data Analysis and Mining, School of Computer Science & Technology, Beijing Jiaotong University","Beijing Key Lab of Traffic Data Analysis and Mining, School of Computer Science & Technology, Beijing Jiaotong University","Beijing Jiaotong University"],"raw_orcid":null,"affiliations":[{"raw_affiliation_string":"Institute of Medical Intelligence, Beijing Key Lab of Traffic Data Analysis and Mining, School of Computer Science & Technology, Beijing Jiaotong University","institution_ids":["https://openalex.org/I21193070"]},{"raw_affiliation_string":"Institute of Medical Intelligence, Beijing Key Lab of Traffic Data Analysis and Mining, School of Computer Science & Technology, Beijing Jiaotong University, Beijing 100044, China","institution_ids":["https://openalex.org/I21193070"]},{"raw_affiliation_string":"Laboratory of Carcinogenesis and Translational Research (Ministry of Education), Peking University Cancer Hospital & Institute","institution_ids":["https://openalex.org/I4210147617"]},{"raw_affiliation_string":"Lab of Traffic Data Analysis and Mining, School of Computer Science & Technology, Beijing Jiaotong University","institution_ids":["https://openalex.org/I21193070"]},{"raw_affiliation_string":"Beijing Key Lab of Traffic Data Analysis and Mining, School of Computer Science & Technology, Beijing Jiaotong University","institution_ids":["https://openalex.org/I21193070"]},{"raw_affiliation_string":"Beijing Jiaotong University","institution_ids":["https://openalex.org/I21193070"]}]},{"author_position":"middle","author":{"id":"https://openalex.org/A5090520641","display_name":"Ting Jia","orcid":"https://orcid.org/0000-0003-1185-6624"},"institutions":[{"id":"https://openalex.org/I21193070","display_name":"Beijing Jiaotong University","ror":"https://ror.org/01yj56c84","country_code":"CN","type":"education","lineage":["https://openalex.org/I21193070"]},{"id":"https://openalex.org/I4210147617","display_name":"Ministry of Education","ror":"https://ror.org/0429te836","country_code":"ET","type":"government","lineage":["https://openalex.org/I4210147617"]}],"countries":["CN","ET"],"is_corresponding":false,"raw_author_name":"Ting Jia","raw_affiliation_strings":["Beijing Key Lab of Traffic Data Analysis and Mining, School of Computer Science & Technology, Beijing Jiaotong University","Laboratory of Carcinogenesis and Translational Research (Ministry of Education), Peking University Cancer Hospital & Institute","Beijing Jiaotong University","Lab of Traffic Data Analysis and Mining, School of Computer Science & Technology, Beijing Jiaotong University","Institute of Medical Intelligence, Beijing Key Lab of Traffic Data Analysis and Mining, School of Computer Science & Technology, Beijing Jiaotong University, Beijing 100044, China","Institute of Medical Intelligence, Beijing Key Lab of Traffic Data Analysis and Mining, School of Computer Science & Technology, Beijing Jiaotong University"],"raw_orcid":null,"affiliations":[{"raw_affiliation_string":"Beijing Key Lab of Traffic Data Analysis and Mining, School of Computer Science & Technology, Beijing Jiaotong University","institution_ids":["https://openalex.org/I21193070"]},{"raw_affiliation_string":"Laboratory of Carcinogenesis and Translational Research (Ministry of Education), Peking University Cancer Hospital & Institute","institution_ids":["https://openalex.org/I4210147617"]},{"raw_affiliation_string":"Beijing Jiaotong University","institution_ids":["https://openalex.org/I21193070"]},{"raw_affiliation_string":"Lab of Traffic Data Analysis and Mining, School of Computer Science & Technology, Beijing Jiaotong University","institution_ids":["https://openalex.org/I21193070"]},{"raw_affiliation_string":"Institute of Medical Intelligence, Beijing Key Lab of Traffic Data Analysis and Mining, School of Computer Science & Technology, Beijing Jiaotong University, Beijing 100044, China","institution_ids":["https://openalex.org/I21193070"]},{"raw_affiliation_string":"Institute of Medical Intelligence, Beijing Key Lab of Traffic Data Analysis and Mining, School of Computer Science & Technology, Beijing Jiaotong University","institution_ids":["https://openalex.org/I21193070"]}]},{"author_position":"middle","author":{"id":"https://openalex.org/A5104279452","display_name":"Fanghui Gu","orcid":null},"institutions":[{"id":"https://openalex.org/I21193070","display_name":"Beijing Jiaotong University","ror":"https://ror.org/01yj56c84","country_code":"CN","type":"education","lineage":["https://openalex.org/I21193070"]},{"id":"https://openalex.org/I4210147617","display_name":"Ministry of Education","ror":"https://ror.org/0429te836","country_code":"ET","type":"government","lineage":["https://openalex.org/I4210147617"]}],"countries":["CN","ET"],"is_corresponding":false,"raw_author_name":"Fanghui Gu","raw_affiliation_strings":["Institute of Medical Intelligence, Beijing Key Lab of Traffic Data Analysis and Mining, School of Computer Science & Technology, Beijing Jiaotong University","Laboratory of Carcinogenesis and Translational Research (Ministry of Education), Peking University Cancer Hospital & Institute","Institute of Medical Intelligence, Beijing Key Lab of Traffic Data Analysis and Mining, School of Computer Science & Technology, Beijing Jiaotong University, Beijing 100044, China","Lab of Traffic Data Analysis and Mining, School of Computer Science & Technology, Beijing Jiaotong University","Beijing Jiaotong University","Beijing Key Lab of Traffic Data Analysis and Mining, School of Computer Science & Technology, Beijing Jiaotong University"],"raw_orcid":null,"affiliations":[{"raw_affiliation_string":"Institute of Medical Intelligence, Beijing Key Lab of Traffic Data Analysis and Mining, School of Computer Science & Technology, Beijing Jiaotong University","institution_ids":["https://openalex.org/I21193070"]},{"raw_affiliation_string":"Laboratory of Carcinogenesis and Translational Research (Ministry of Education), Peking University Cancer Hospital & Institute","institution_ids":["https://openalex.org/I4210147617"]},{"raw_affiliation_string":"Institute of Medical Intelligence, Beijing Key Lab of Traffic Data Analysis and Mining, School of Computer Science & Technology, Beijing Jiaotong University, Beijing 100044, China","institution_ids":["https://openalex.org/I21193070"]},{"raw_affiliation_string":"Lab of Traffic Data Analysis and Mining, School of Computer Science & Technology, Beijing Jiaotong University","institution_ids":["https://openalex.org/I21193070"]},{"raw_affiliation_string":"Beijing Jiaotong University","institution_ids":["https://openalex.org/I21193070"]},{"raw_affiliation_string":"Beijing Key Lab of Traffic Data Analysis and Mining, School of Computer Science & Technology, Beijing Jiaotong University","institution_ids":["https://openalex.org/I21193070"]}]},{"author_position":"middle","author":{"id":"https://openalex.org/A5034700892","display_name":"Chongyu Wang","orcid":"https://orcid.org/0009-0001-5499-2418"},"institutions":[{"id":"https://openalex.org/I21193070","display_name":"Beijing Jiaotong University","ror":"https://ror.org/01yj56c84","country_code":"CN","type":"education","lineage":["https://openalex.org/I21193070"]},{"id":"https://openalex.org/I4210147617","display_name":"Ministry of Education","ror":"https://ror.org/0429te836","country_code":"ET","type":"government","lineage":["https://openalex.org/I4210147617"]}],"countries":["CN","ET"],"is_corresponding":false,"raw_author_name":"Chongyu Wang","raw_affiliation_strings":["Lab of Traffic Data Analysis and Mining, School of Computer Science & Technology, Beijing Jiaotong University","Beijing Key Lab of Traffic Data Analysis and Mining, School of Computer Science & Technology, Beijing Jiaotong University","Institute of Medical Intelligence, Beijing Key Lab of Traffic Data Analysis and Mining, School of Computer Science & Technology, Beijing Jiaotong University","Laboratory of Carcinogenesis and Translational Research (Ministry of Education), Peking University Cancer Hospital & Institute","Beijing Jiaotong University","Institute of Medical Intelligence, Beijing Key Lab of Traffic Data Analysis and Mining, School of Computer Science & Technology, Beijing Jiaotong University, Beijing 100044, China"],"raw_orcid":null,"affiliations":[{"raw_affiliation_string":"Lab of Traffic Data Analysis and Mining, School of Computer Science & Technology, Beijing Jiaotong University","institution_ids":["https://openalex.org/I21193070"]},{"raw_affiliation_string":"Beijing Key Lab of Traffic Data Analysis and Mining, School of Computer Science & Technology, Beijing Jiaotong University","institution_ids":["https://openalex.org/I21193070"]},{"raw_affiliation_string":"Institute of Medical Intelligence, Beijing Key Lab of Traffic Data Analysis and Mining, School of Computer Science & Technology, Beijing Jiaotong University","institution_ids":["https://openalex.org/I21193070"]},{"raw_affiliation_string":"Laboratory of Carcinogenesis and Translational Research (Ministry of Education), Peking University Cancer Hospital & Institute","institution_ids":["https://openalex.org/I4210147617"]},{"raw_affiliation_string":"Beijing Jiaotong University","institution_ids":["https://openalex.org/I21193070"]},{"raw_affiliation_string":"Institute of Medical Intelligence, Beijing Key Lab of Traffic Data Analysis and Mining, School of Computer Science & Technology, Beijing Jiaotong University, Beijing 100044, China","institution_ids":["https://openalex.org/I21193070"]}]},{"author_position":"middle","author":{"id":"https://openalex.org/A5100576907","display_name":"Kuan Xu","orcid":"https://orcid.org/0000-0003-1884-276X"},"institutions":[{"id":"https://openalex.org/I21193070","display_name":"Beijing Jiaotong University","ror":"https://ror.org/01yj56c84","country_code":"CN","type":"education","lineage":["https://openalex.org/I21193070"]},{"id":"https://openalex.org/I4210147617","display_name":"Ministry of Education","ror":"https://ror.org/0429te836","country_code":"ET","type":"government","lineage":["https://openalex.org/I4210147617"]}],"countries":["CN","ET"],"is_corresponding":false,"raw_author_name":"Kuan Xu","raw_affiliation_strings":["Beijing Jiaotong University","Institute of Medical Intelligence, Beijing Key Lab of Traffic Data Analysis and Mining, School of Computer Science & Technology, Beijing Jiaotong University","Institute of Medical Intelligence, Beijing Key Lab of Traffic Data Analysis and Mining, School of Computer Science & Technology, Beijing Jiaotong University, Beijing 100044, China","Lab of Traffic Data Analysis and Mining, School of Computer Science & Technology, Beijing Jiaotong University","Beijing Key Lab of Traffic Data Analysis and Mining, School of Computer Science & Technology, Beijing Jiaotong University","Laboratory of Carcinogenesis and Translational Research (Ministry of Education), Peking University Cancer Hospital & Institute"],"raw_orcid":null,"affiliations":[{"raw_affiliation_string":"Beijing Jiaotong University","institution_ids":["https://openalex.org/I21193070"]},{"raw_affiliation_string":"Institute of Medical Intelligence, Beijing Key Lab of Traffic Data Analysis and Mining, School of Computer Science & Technology, Beijing Jiaotong University","institution_ids":["https://openalex.org/I21193070"]},{"raw_affiliation_string":"Institute of Medical Intelligence, Beijing Key Lab of Traffic Data Analysis and Mining, School of Computer Science & Technology, Beijing Jiaotong University, Beijing 100044, China","institution_ids":["https://openalex.org/I21193070"]},{"raw_affiliation_string":"Lab of Traffic Data Analysis and Mining, School of Computer Science & Technology, Beijing Jiaotong University","institution_ids":["https://openalex.org/I21193070"]},{"raw_affiliation_string":"Beijing Key Lab of Traffic Data Analysis and Mining, School of Computer Science & Technology, Beijing Jiaotong University","institution_ids":["https://openalex.org/I21193070"]},{"raw_affiliation_string":"Laboratory of Carcinogenesis and Translational Research (Ministry of Education), Peking University Cancer Hospital & Institute","institution_ids":["https://openalex.org/I4210147617"]}]},{"author_position":"middle","author":{"id":"https://openalex.org/A5004926341","display_name":"Zixin Shu","orcid":"https://orcid.org/0000-0001-6078-5645"},"institutions":[{"id":"https://openalex.org/I21193070","display_name":"Beijing Jiaotong University","ror":"https://ror.org/01yj56c84","country_code":"CN","type":"education","lineage":["https://openalex.org/I21193070"]},{"id":"https://openalex.org/I4210147617","display_name":"Ministry of Education","ror":"https://ror.org/0429te836","country_code":"ET","type":"government","lineage":["https://openalex.org/I4210147617"]}],"countries":["CN","ET"],"is_corresponding":false,"raw_author_name":"Zixin Shu","raw_affiliation_strings":["Laboratory of Carcinogenesis and Translational Research (Ministry of Education), Peking University Cancer Hospital & Institute","Beijing Jiaotong University","Institute of Medical Intelligence, Beijing Key Lab of Traffic Data Analysis and Mining, School of Computer Science & Technology, Beijing Jiaotong University, Beijing 100044, China","Lab of Traffic Data Analysis and Mining, School of Computer Science & Technology, Beijing Jiaotong University","Beijing Key Lab of Traffic Data Analysis and Mining, School of Computer Science & Technology, Beijing Jiaotong University","Institute of Medical Intelligence, Beijing Key Lab of Traffic Data Analysis and Mining, School of Computer Science & Technology, Beijing Jiaotong University"],"raw_orcid":null,"affiliations":[{"raw_affiliation_string":"Laboratory of Carcinogenesis and Translational Research (Ministry of Education), Peking University Cancer Hospital & Institute","institution_ids":["https://openalex.org/I4210147617"]},{"raw_affiliation_string":"Beijing Jiaotong University","institution_ids":["https://openalex.org/I21193070"]},{"raw_affiliation_string":"Institute of Medical Intelligence, Beijing Key Lab of Traffic Data Analysis and Mining, School of Computer Science & Technology, Beijing Jiaotong University, Beijing 100044, China","institution_ids":["https://openalex.org/I21193070"]},{"raw_affiliation_string":"Lab of Traffic Data Analysis and Mining, School of Computer Science & Technology, Beijing Jiaotong University","institution_ids":["https://openalex.org/I21193070"]},{"raw_affiliation_string":"Beijing Key Lab of Traffic Data Analysis and Mining, School of Computer Science & Technology, Beijing Jiaotong University","institution_ids":["https://openalex.org/I21193070"]},{"raw_affiliation_string":"Institute of Medical Intelligence, Beijing Key Lab of Traffic Data Analysis and Mining, School of Computer Science & Technology, Beijing Jiaotong University","institution_ids":["https://openalex.org/I21193070"]}]},{"author_position":"middle","author":{"id":"https://openalex.org/A5102006460","display_name":"Jianan Xia","orcid":"https://orcid.org/0000-0002-4219-0602"},"institutions":[{"id":"https://openalex.org/I21193070","display_name":"Beijing Jiaotong University","ror":"https://ror.org/01yj56c84","country_code":"CN","type":"education","lineage":["https://openalex.org/I21193070"]},{"id":"https://openalex.org/I4210147617","display_name":"Ministry of Education","ror":"https://ror.org/0429te836","country_code":"ET","type":"government","lineage":["https://openalex.org/I4210147617"]}],"countries":["CN","ET"],"is_corresponding":false,"raw_author_name":"Jianan Xia","raw_affiliation_strings":["Lab of Traffic Data Analysis and Mining, School of Computer Science & Technology, Beijing Jiaotong University","Beijing Jiaotong University","Laboratory of Carcinogenesis and Translational Research (Ministry of Education), Peking University Cancer Hospital & Institute","Institute of Medical Intelligence, Beijing Key Lab of Traffic Data Analysis and Mining, School of Computer Science & Technology, Beijing Jiaotong University","Institute of Medical Intelligence, Beijing Key Lab of Traffic Data Analysis and Mining, School of Computer Science & Technology, Beijing Jiaotong University, Beijing 100044, China","Beijing Key Lab of Traffic Data Analysis and Mining, School of Computer Science & Technology, Beijing Jiaotong University"],"raw_orcid":null,"affiliations":[{"raw_affiliation_string":"Lab of Traffic Data Analysis and Mining, School of Computer Science & Technology, Beijing Jiaotong University","institution_ids":["https://openalex.org/I21193070"]},{"raw_affiliation_string":"Beijing Jiaotong University","institution_ids":["https://openalex.org/I21193070"]},{"raw_affiliation_string":"Laboratory of Carcinogenesis and Translational Research (Ministry of Education), Peking University Cancer Hospital & Institute","institution_ids":["https://openalex.org/I4210147617"]},{"raw_affiliation_string":"Institute of Medical Intelligence, Beijing Key Lab of Traffic Data Analysis and Mining, School of Computer Science & Technology, Beijing Jiaotong University","institution_ids":["https://openalex.org/I21193070"]},{"raw_affiliation_string":"Institute of Medical Intelligence, Beijing Key Lab of Traffic Data Analysis and Mining, School of Computer Science & Technology, Beijing Jiaotong University, Beijing 100044, China","institution_ids":["https://openalex.org/I21193070"]},{"raw_affiliation_string":"Beijing Key Lab of Traffic Data Analysis and Mining, School of Computer Science & Technology, Beijing Jiaotong University","institution_ids":["https://openalex.org/I21193070"]}]},{"author_position":"middle","author":{"id":"https://openalex.org/A5023593453","display_name":"Qiang Zhu","orcid":"https://orcid.org/0000-0002-4677-1244"},"institutions":[{"id":"https://openalex.org/I21193070","display_name":"Beijing Jiaotong University","ror":"https://ror.org/01yj56c84","country_code":"CN","type":"education","lineage":["https://openalex.org/I21193070"]},{"id":"https://openalex.org/I4210147617","display_name":"Ministry of Education","ror":"https://ror.org/0429te836","country_code":"ET","type":"government","lineage":["https://openalex.org/I4210147617"]}],"countries":["CN","ET"],"is_corresponding":false,"raw_author_name":"Qiang Zhu","raw_affiliation_strings":["Institute of Medical Intelligence, Beijing Key Lab of Traffic Data Analysis and Mining, School of Computer Science & Technology, Beijing Jiaotong University, Beijing 100044, China","Laboratory of Carcinogenesis and Translational Research (Ministry of Education), Peking University Cancer Hospital & Institute","Beijing Key Lab of Traffic Data Analysis and Mining, School of Computer Science & Technology, Beijing Jiaotong University","Beijing Jiaotong University","Institute of Medical Intelligence, Beijing Key Lab of Traffic Data Analysis and Mining, School of Computer Science & Technology, Beijing Jiaotong University","Lab of Traffic Data Analysis and Mining, School of Computer Science & Technology, Beijing Jiaotong University"],"raw_orcid":null,"affiliations":[{"raw_affiliation_string":"Institute of Medical Intelligence, Beijing Key Lab of Traffic Data Analysis and Mining, School of Computer Science & Technology, Beijing Jiaotong University, Beijing 100044, China","institution_ids":["https://openalex.org/I21193070"]},{"raw_affiliation_string":"Laboratory of Carcinogenesis and Translational Research (Ministry of Education), Peking University Cancer Hospital & Institute","institution_ids":["https://openalex.org/I4210147617"]},{"raw_affiliation_string":"Beijing Key Lab of Traffic Data Analysis and Mining, School of Computer Science & Technology, Beijing Jiaotong University","institution_ids":["https://openalex.org/I21193070"]},{"raw_affiliation_string":"Beijing Jiaotong University","institution_ids":["https://openalex.org/I21193070"]},{"raw_affiliation_string":"Institute of Medical Intelligence, Beijing Key Lab of Traffic Data Analysis and Mining, School of Computer Science & Technology, Beijing Jiaotong University","institution_ids":["https://openalex.org/I21193070"]},{"raw_affiliation_string":"Lab of Traffic Data Analysis and Mining, School of Computer Science & Technology, Beijing Jiaotong University","institution_ids":["https://openalex.org/I21193070"]}]},{"author_position":"last","author":{"id":"https://openalex.org/A5052838340","display_name":"Xuezhong Zhou","orcid":"https://orcid.org/0000-0002-4713-3594"},"institutions":[{"id":"https://openalex.org/I21193070","display_name":"Beijing Jiaotong University","ror":"https://ror.org/01yj56c84","country_code":"CN","type":"education","lineage":["https://openalex.org/I21193070"]},{"id":"https://openalex.org/I4210147617","display_name":"Ministry of Education","ror":"https://ror.org/0429te836","country_code":"ET","type":"government","lineage":["https://openalex.org/I4210147617"]}],"countries":["CN","ET"],"is_corresponding":false,"raw_author_name":"Xuezhong Zhou","raw_affiliation_strings":["Lab of Traffic Data Analysis and Mining, School of Computer Science & Technology, Beijing Jiaotong University","Institute of Medical Intelligence, Beijing Key Lab of Traffic Data Analysis and Mining, School of Computer Science & Technology, Beijing Jiaotong University, Beijing 100044, China","Institute of Medical Intelligence, Beijing Key Lab of Traffic Data Analysis and Mining, School of Computer Science & Technology, Beijing Jiaotong University","Laboratory of Carcinogenesis and Translational Research (Ministry of Education), Peking University Cancer Hospital & Institute","Beijing Jiaotong University","Beijing Key Lab of Traffic Data Analysis and Mining, School of Computer Science & Technology, Beijing Jiaotong University"],"raw_orcid":"https://orcid.org/0000-0002-4713-3594","affiliations":[{"raw_affiliation_string":"Lab of Traffic Data Analysis and Mining, School of Computer Science & Technology, Beijing Jiaotong University","institution_ids":["https://openalex.org/I21193070"]},{"raw_affiliation_string":"Institute of Medical Intelligence, Beijing Key Lab of Traffic Data Analysis and Mining, School of Computer Science & Technology, Beijing Jiaotong University, Beijing 100044, China","institution_ids":["https://openalex.org/I21193070"]},{"raw_affiliation_string":"Institute of Medical Intelligence, Beijing Key Lab of Traffic Data Analysis and Mining, School of Computer Science & Technology, Beijing Jiaotong University","institution_ids":["https://openalex.org/I21193070"]},{"raw_affiliation_string":"Laboratory of Carcinogenesis and Translational Research (Ministry of Education), Peking University Cancer Hospital & Institute","institution_ids":["https://openalex.org/I4210147617"]},{"raw_affiliation_string":"Beijing Jiaotong University","institution_ids":["https://openalex.org/I21193070"]},{"raw_affiliation_string":"Beijing Key Lab of Traffic Data Analysis and Mining, School of Computer Science & Technology, Beijing Jiaotong University","institution_ids":["https://openalex.org/I21193070"]}]}],"institutions":[],"countries_distinct_count":2,"institutions_distinct_count":10,"corresponding_author_ids":["https://openalex.org/A5100410977"],"corresponding_institution_ids":["https://openalex.org/I21193070","https://openalex.org/I4210147617"],"apc_list":{"value":4011,"currency":"USD","value_usd":4011},"apc_paid":{"value":4011,"currency":"USD","value_usd":4011},"fwci":3.1654,"has_fulltext":true,"cited_by_count":15,"citation_normalized_percentile":{"value":0.92164532,"is_in_top_1_percent":false,"is_in_top_10_percent":true},"cited_by_percentile_year":{"min":90,"max":99},"biblio":{"volume":"25","issue":"3","first_page":null,"last_page":null},"is_retracted":false,"is_paratext":false,"is_xpac":false,"primary_topic":{"id":"https://openalex.org/T10269","display_name":"Epigenetics and DNA Methylation","score":0.9918000102043152,"subfield":{"id":"https://openalex.org/subfields/1312","display_name":"Molecular Biology"},"field":{"id":"https://openalex.org/fields/13","display_name":"Biochemistry, Genetics and Molecular Biology"},"domain":{"id":"https://openalex.org/domains/1","display_name":"Life Sciences"}},"topics":[{"id":"https://openalex.org/T10269","display_name":"Epigenetics and DNA Methylation","score":0.9918000102043152,"subfield":{"id":"https://openalex.org/subfields/1312","display_name":"Molecular Biology"},"field":{"id":"https://openalex.org/fields/13","display_name":"Biochemistry, Genetics and Molecular Biology"},"domain":{"id":"https://openalex.org/domains/1","display_name":"Life Sciences"}},{"id":"https://openalex.org/T12254","display_name":"Machine Learning in Bioinformatics","score":0.9901000261306763,"subfield":{"id":"https://openalex.org/subfields/1312","display_name":"Molecular Biology"},"field":{"id":"https://openalex.org/fields/13","display_name":"Biochemistry, Genetics and Molecular Biology"},"domain":{"id":"https://openalex.org/domains/1","display_name":"Life Sciences"}},{"id":"https://openalex.org/T11273","display_name":"Advanced Graph Neural Networks","score":0.988099992275238,"subfield":{"id":"https://openalex.org/subfields/1702","display_name":"Artificial Intelligence"},"field":{"id":"https://openalex.org/fields/17","display_name":"Computer Science"},"domain":{"id":"https://openalex.org/domains/3","display_name":"Physical Sciences"}}],"keywords":[{"id":"https://openalex.org/keywords/computer-science","display_name":"Computer science","score":0.700406551361084},{"id":"https://openalex.org/keywords/embedding","display_name":"Embedding","score":0.6152905821800232},{"id":"https://openalex.org/keywords/scalability","display_name":"Scalability","score":0.5927377343177795},{"id":"https://openalex.org/keywords/graph","display_name":"Graph","score":0.5477536916732788},{"id":"https://openalex.org/keywords/artificial-intelligence","display_name":"Artificial intelligence","score":0.49477118253707886},{"id":"https://openalex.org/keywords/biological-data","display_name":"Biological data","score":0.4867827594280243},{"id":"https://openalex.org/keywords/graph-embedding","display_name":"Graph embedding","score":0.4705253839492798},{"id":"https://openalex.org/keywords/machine-learning","display_name":"Machine learning","score":0.4503808617591858},{"id":"https://openalex.org/keywords/domain-knowledge","display_name":"Domain knowledge","score":0.4403139054775238},{"id":"https://openalex.org/keywords/feature-learning","display_name":"Feature learning","score":0.4261972904205322},{"id":"https://openalex.org/keywords/representation","display_name":"Representation (politics)","score":0.42067837715148926},{"id":"https://openalex.org/keywords/theoretical-computer-science","display_name":"Theoretical computer science","score":0.36912742257118225},{"id":"https://openalex.org/keywords/bioinformatics","display_name":"Bioinformatics","score":0.20638126134872437},{"id":"https://openalex.org/keywords/biology","display_name":"Biology","score":0.10926687717437744}],"concepts":[{"id":"https://openalex.org/C41008148","wikidata":"https://www.wikidata.org/wiki/Q21198","display_name":"Computer science","level":0,"score":0.700406551361084},{"id":"https://openalex.org/C41608201","wikidata":"https://www.wikidata.org/wiki/Q980509","display_name":"Embedding","level":2,"score":0.6152905821800232},{"id":"https://openalex.org/C48044578","wikidata":"https://www.wikidata.org/wiki/Q727490","display_name":"Scalability","level":2,"score":0.5927377343177795},{"id":"https://openalex.org/C132525143","wikidata":"https://www.wikidata.org/wiki/Q141488","display_name":"Graph","level":2,"score":0.5477536916732788},{"id":"https://openalex.org/C154945302","wikidata":"https://www.wikidata.org/wiki/Q11660","display_name":"Artificial intelligence","level":1,"score":0.49477118253707886},{"id":"https://openalex.org/C201797286","wikidata":"https://www.wikidata.org/wiki/Q4914986","display_name":"Biological data","level":2,"score":0.4867827594280243},{"id":"https://openalex.org/C75564084","wikidata":"https://www.wikidata.org/wiki/Q5597085","display_name":"Graph embedding","level":3,"score":0.4705253839492798},{"id":"https://openalex.org/C119857082","wikidata":"https://www.wikidata.org/wiki/Q2539","display_name":"Machine learning","level":1,"score":0.4503808617591858},{"id":"https://openalex.org/C207685749","wikidata":"https://www.wikidata.org/wiki/Q2088941","display_name":"Domain knowledge","level":2,"score":0.4403139054775238},{"id":"https://openalex.org/C59404180","wikidata":"https://www.wikidata.org/wiki/Q17013334","display_name":"Feature learning","level":2,"score":0.4261972904205322},{"id":"https://openalex.org/C2776359362","wikidata":"https://www.wikidata.org/wiki/Q2145286","display_name":"Representation (politics)","level":3,"score":0.42067837715148926},{"id":"https://openalex.org/C80444323","wikidata":"https://www.wikidata.org/wiki/Q2878974","display_name":"Theoretical computer science","level":1,"score":0.36912742257118225},{"id":"https://openalex.org/C60644358","wikidata":"https://www.wikidata.org/wiki/Q128570","display_name":"Bioinformatics","level":1,"score":0.20638126134872437},{"id":"https://openalex.org/C86803240","wikidata":"https://www.wikidata.org/wiki/Q420","display_name":"Biology","level":0,"score":0.10926687717437744},{"id":"https://openalex.org/C17744445","wikidata":"https://www.wikidata.org/wiki/Q36442","display_name":"Political science","level":0,"score":0.0},{"id":"https://openalex.org/C199539241","wikidata":"https://www.wikidata.org/wiki/Q7748","display_name":"Law","level":1,"score":0.0},{"id":"https://openalex.org/C94625758","wikidata":"https://www.wikidata.org/wiki/Q7163","display_name":"Politics","level":2,"score":0.0},{"id":"https://openalex.org/C77088390","wikidata":"https://www.wikidata.org/wiki/Q8513","display_name":"Database","level":1,"score":0.0}],"mesh":[{"descriptor_ui":"D000069550","descriptor_name":"Machine Learning","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D000069550","descriptor_name":"Machine Learning","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D000069550","descriptor_name":"Machine Learning","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D000069550","descriptor_name":"Machine Learning","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D000069550","descriptor_name":"Machine Learning","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D000465","descriptor_name":"Algorithms","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D000465","descriptor_name":"Algorithms","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D000465","descriptor_name":"Algorithms","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D000465","descriptor_name":"Algorithms","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D000465","descriptor_name":"Algorithms","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D001690","descriptor_name":"Biological Science Disciplines","qualifier_ui":null,"qualifier_name":null,"is_major_topic":true},{"descriptor_ui":"D001690","descriptor_name":"Biological Science Disciplines","qualifier_ui":null,"qualifier_name":null,"is_major_topic":true},{"descriptor_ui":"D001690","descriptor_name":"Biological Science Disciplines","qualifier_ui":null,"qualifier_name":null,"is_major_topic":true},{"descriptor_ui":"D001690","descriptor_name":"Biological Science Disciplines","qualifier_ui":null,"qualifier_name":null,"is_major_topic":true},{"descriptor_ui":"D001690","descriptor_name":"Biological Science Disciplines","qualifier_ui":null,"qualifier_name":null,"is_major_topic":true},{"descriptor_ui":"D010363","descriptor_name":"Pattern Recognition, Automated","qualifier_ui":null,"qualifier_name":null,"is_major_topic":true},{"descriptor_ui":"D010363","descriptor_name":"Pattern Recognition, Automated","qualifier_ui":null,"qualifier_name":null,"is_major_topic":true},{"descriptor_ui":"D010363","descriptor_name":"Pattern Recognition, Automated","qualifier_ui":null,"qualifier_name":null,"is_major_topic":true},{"descriptor_ui":"D010363","descriptor_name":"Pattern Recognition, Automated","qualifier_ui":null,"qualifier_name":null,"is_major_topic":true},{"descriptor_ui":"D010363","descriptor_name":"Pattern Recognition, Automated","qualifier_ui":null,"qualifier_name":null,"is_major_topic":true},{"descriptor_ui":"D012660","descriptor_name":"Semantics","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D012660","descriptor_name":"Semantics","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D012660","descriptor_name":"Semantics","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D012660","descriptor_name":"Semantics","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D012660","descriptor_name":"Semantics","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false}],"locations_count":3,"locations":[{"id":"doi:10.1093/bib/bbae161","is_oa":true,"landing_page_url":"https://doi.org/10.1093/bib/bbae161","pdf_url":"https://academic.oup.com/bib/article-pdf/25/3/bbae161/57215907/bbae161.pdf","source":{"id":"https://openalex.org/S91767247","display_name":"Briefings in Bioinformatics","issn_l":"1467-5463","issn":["1467-5463","1477-4054"],"is_oa":true,"is_in_doaj":true,"is_core":true,"host_organization":"https://openalex.org/P4310311648","host_organization_name":"Oxford University Press","host_organization_lineage":["https://openalex.org/P4310311648","https://openalex.org/P4310311647"],"host_organization_lineage_names":["Oxford University Press","University of Oxford"],"type":"journal"},"license":"cc-by","license_id":"https://openalex.org/licenses/cc-by","version":"publishedVersion","is_accepted":true,"is_published":true,"raw_source_name":"Briefings in Bioinformatics","raw_type":"journal-article"},{"id":"pmid:38605639","is_oa":false,"landing_page_url":"https://pubmed.ncbi.nlm.nih.gov/38605639","pdf_url":null,"source":{"id":"https://openalex.org/S4306525036","display_name":"PubMed","issn_l":null,"issn":null,"is_oa":false,"is_in_doaj":false,"is_core":false,"host_organization":"https://openalex.org/I1299303238","host_organization_name":"National Institutes of Health","host_organization_lineage":["https://openalex.org/I1299303238"],"host_organization_lineage_names":[],"type":"repository"},"license":null,"license_id":null,"version":"publishedVersion","is_accepted":true,"is_published":true,"raw_source_name":"Briefings in bioinformatics","raw_type":null},{"id":"pmh:oai:pubmedcentral.nih.gov:11009469","is_oa":true,"landing_page_url":"https://www.ncbi.nlm.nih.gov/pmc/articles/11009469","pdf_url":"https://pmc.ncbi.nlm.nih.gov/articles/PMC11009469/pdf/bbae161.pdf","source":{"id":"https://openalex.org/S2764455111","display_name":"PubMed Central","issn_l":null,"issn":null,"is_oa":true,"is_in_doaj":false,"is_core":false,"host_organization":"https://openalex.org/I1299303238","host_organization_name":"National Institutes of Health","host_organization_lineage":["https://openalex.org/I1299303238"],"host_organization_lineage_names":[],"type":"repository"},"license":"cc-by","license_id":"https://openalex.org/licenses/cc-by","version":"submittedVersion","is_accepted":false,"is_published":false,"raw_source_name":"Brief Bioinform","raw_type":"Text"}],"best_oa_location":{"id":"doi:10.1093/bib/bbae161","is_oa":true,"landing_page_url":"https://doi.org/10.1093/bib/bbae161","pdf_url":"https://academic.oup.com/bib/article-pdf/25/3/bbae161/57215907/bbae161.pdf","source":{"id":"https://openalex.org/S91767247","display_name":"Briefings in Bioinformatics","issn_l":"1467-5463","issn":["1467-5463","1477-4054"],"is_oa":true,"is_in_doaj":true,"is_core":true,"host_organization":"https://openalex.org/P4310311648","host_organization_name":"Oxford University Press","host_organization_lineage":["https://openalex.org/P4310311648","https://openalex.org/P4310311647"],"host_organization_lineage_names":["Oxford University Press","University of Oxford"],"type":"journal"},"license":"cc-by","license_id":"https://openalex.org/licenses/cc-by","version":"publishedVersion","is_accepted":true,"is_published":true,"raw_source_name":"Briefings in Bioinformatics","raw_type":"journal-article"},"sustainable_development_goals":[{"id":"https://metadata.un.org/sdg/12","score":0.44999998807907104,"display_name":"Responsible consumption and production"}],"awards":[{"id":"https://openalex.org/G2358862462","display_name":null,"funder_award_id":"82374302","funder_id":"https://openalex.org/F4320321001","funder_display_name":"National Natural Science Foundation of China"},{"id":"https://openalex.org/G2906908192","display_name":null,"funder_award_id":"82174533","funder_id":"https://openalex.org/F4320321001","funder_display_name":"National Natural Science Foundation of China"},{"id":"https://openalex.org/G5258016173","display_name":null,"funder_award_id":"U23B2062","funder_id":"https://openalex.org/F4320321001","funder_display_name":"National Natural Science Foundation of China"},{"id":"https://openalex.org/G7015565034","display_name":null,"funder_award_id":"82204941","funder_id":"https://openalex.org/F4320321001","funder_display_name":"National Natural Science Foundation of China"},{"id":"https://openalex.org/G7427286383","display_name":null,"funder_award_id":"L232033","funder_id":"https://openalex.org/F4320322919","funder_display_name":"Natural Science Foundation of Beijing Municipality"},{"id":"https://openalex.org/G827368423","display_name":null,"funder_award_id":"2021YFC1712901","funder_id":"https://openalex.org/F4320335777","funder_display_name":"National Key Research and Development Program of China"},{"id":"https://openalex.org/G8560539007","display_name":null,"funder_award_id":"2023YFC3502604","funder_id":"https://openalex.org/F4320335777","funder_display_name":"National Key Research and Development Program of China"}],"funders":[{"id":"https://openalex.org/F4320321001","display_name":"National Natural Science Foundation of China","ror":"https://ror.org/01h0zpd94"},{"id":"https://openalex.org/F4320322919","display_name":"Natural Science Foundation of Beijing Municipality","ror":null},{"id":"https://openalex.org/F4320335777","display_name":"National Key Research and Development Program of China","ror":null}],"has_content":{"pdf":true,"grobid_xml":false},"content_urls":{"pdf":"https://content.openalex.org/works/W4394735397.pdf"},"referenced_works_count":65,"referenced_works":["https://openalex.org/W1976876857","https://openalex.org/W2007807048","https://openalex.org/W2038122249","https://openalex.org/W2064675550","https://openalex.org/W2080240378","https://openalex.org/W2097498614","https://openalex.org/W2100582962","https://openalex.org/W2118607021","https://openalex.org/W2119211400","https://openalex.org/W2123500593","https://openalex.org/W2127795553","https://openalex.org/W2136848157","https://openalex.org/W2145578524","https://openalex.org/W2147351367","https://openalex.org/W2159482845","https://openalex.org/W2258054274","https://openalex.org/W2294516783","https://openalex.org/W2409852956","https://openalex.org/W2513408092","https://openalex.org/W2537679995","https://openalex.org/W2728059831","https://openalex.org/W2759136286","https://openalex.org/W2768768463","https://openalex.org/W2890210261","https://openalex.org/W2898593560","https://openalex.org/W2899291554","https://openalex.org/W2914584698","https://openalex.org/W2914592219","https://openalex.org/W2920198243","https://openalex.org/W2938638575","https://openalex.org/W2944851425","https://openalex.org/W2962756421","https://openalex.org/W2996749332","https://openalex.org/W3033000020","https://openalex.org/W3036981277","https://openalex.org/W3045868447","https://openalex.org/W3103296573","https://openalex.org/W3112600195","https://openalex.org/W3119857312","https://openalex.org/W3120491054","https://openalex.org/W3128514004","https://openalex.org/W3162347596","https://openalex.org/W3197149044","https://openalex.org/W3205802642","https://openalex.org/W3217681006","https://openalex.org/W4210493972","https://openalex.org/W4213205106","https://openalex.org/W4213281931","https://openalex.org/W4225949800","https://openalex.org/W4226229254","https://openalex.org/W4294216483","https://openalex.org/W4294391344","https://openalex.org/W4297474196","https://openalex.org/W4309440997","https://openalex.org/W4312210873","https://openalex.org/W4367668870","https://openalex.org/W6631964550","https://openalex.org/W6678830454","https://openalex.org/W6718112784","https://openalex.org/W6751747387","https://openalex.org/W6758075616","https://openalex.org/W6761308359","https://openalex.org/W6780762968","https://openalex.org/W6795853377","https://openalex.org/W6851860926"],"related_works":["https://openalex.org/W3036264823","https://openalex.org/W3206528106","https://openalex.org/W2912814903","https://openalex.org/W2123605750","https://openalex.org/W2088740331","https://openalex.org/W3038102983","https://openalex.org/W2950907416","https://openalex.org/W1559483280","https://openalex.org/W2082479932","https://openalex.org/W2977618689"],"abstract_inverted_index":{"The":[0],"accurate":[1],"identification":[2],"of":[3,56,72,82,147,191],"disease-associated":[4],"genes":[5],"is":[6],"crucial":[7],"for":[8,118,183,229],"understanding":[9],"the":[10,69,76,80,145,156,187,192,221],"molecular":[11],"mechanisms":[12],"underlying":[13],"various":[14],"diseases.":[15],"Most":[16],"current":[17],"methods":[18,37,66,177,182],"focus":[19],"on":[20,106],"constructing":[21],"biological":[22,44,91,102,189],"networks":[23],"and":[24,108,110,136,154,234],"utilizing":[25],"machine":[26],"learning,":[27,30],"particularly":[28],"deep":[29],"to":[31,89,143,158,199,214,225],"identify":[32,201,215],"disease":[33,119,161,174,216],"genes.":[34,162,204],"However,":[35],"these":[36,97],"overlook":[38],"complex":[39],"relations":[40,74],"among":[41],"entities":[42],"in":[43,53,151],"knowledge":[45,77,103,114,179,210],"graphs.":[46,78],"Such":[47],"information":[48,71],"has":[49],"been":[50],"successfully":[51],"applied":[52,88],"other":[54],"areas":[55],"life":[57],"science":[58],"research,":[59],"demonstrating":[60],"their":[61],"effectiveness.":[62],"Knowledge":[63],"graph":[64,104,115,180,211],"embedding":[65,181],"can":[67],"learn":[68],"semantic":[70],"different":[73],"within":[75,139],"Nonetheless,":[79],"performance":[81],"existing":[83,173],"representation":[84,146],"learning":[85],"techniques,":[86],"when":[87],"domain-specific":[90],"data,":[92],"remains":[93],"suboptimal.":[94],"To":[95],"solve":[96],"problems,":[98],"we":[99],"construct":[100],"a":[101,208],"centered":[105],"diseases":[107],"genes,":[109,218],"develop":[111],"an":[112,130],"end-to-end":[113],"completion":[116,212],"framework":[117,213],"gene":[120,175],"prediction":[121,176],"using":[122],"interactional":[123],"tensor":[124,140],"decomposition":[125],"named":[126],"KDGene.":[127],"KDGene":[128,167],"incorporates":[129],"interaction":[131],"module":[132],"that":[133,166],"bridges":[134],"entity":[135],"relation":[137],"embeddings":[138],"decomposition,":[141],"aiming":[142],"improve":[144],"semantically":[148],"similar":[149],"concepts":[150],"specific":[152],"domains":[153],"enhance":[155],"ability":[157],"accurately":[159,200],"predict":[160],"Experimental":[163],"results":[164,194,222],"show":[165],"significantly":[168],"outperforms":[169],"state-of-the-art":[170],"algorithms,":[171],"whether":[172],"or":[178],"general":[184],"domains.":[185],"Moreover,":[186],"comprehensive":[188],"analysis":[190],"predicted":[193],"further":[195,230],"validates":[196],"KDGene's":[197],"capability":[198],"new":[202],"candidate":[203,217],"This":[205],"work":[206],"proposes":[207],"scalable":[209],"from":[219],"which":[220],"are":[223,237],"promising":[224],"provide":[226],"valuable":[227],"references":[228],"wet":[231],"experiments.":[232],"Data":[233],"source":[235],"codes":[236],"available":[238],"at":[239],"https://github.com/2020MEAI/KDGene.":[240]},"counts_by_year":[{"year":2026,"cited_by_count":3},{"year":2025,"cited_by_count":11},{"year":2024,"cited_by_count":1}],"updated_date":"2026-05-21T06:26:12.895304","created_date":"2025-10-10T00:00:00"}
