{"id":"https://openalex.org/W4391788768","doi":"https://doi.org/10.1093/bib/bbae035","title":"Standigm ASK\u2122: knowledge graph and artificial intelligence platform applied to target discovery in idiopathic pulmonary fibrosis","display_name":"Standigm ASK\u2122: knowledge graph and artificial intelligence platform applied to target discovery in idiopathic pulmonary fibrosis","publication_year":2024,"publication_date":"2024-01-22","ids":{"openalex":"https://openalex.org/W4391788768","doi":"https://doi.org/10.1093/bib/bbae035","pmid":"https://pubmed.ncbi.nlm.nih.gov/38349059"},"language":"en","primary_location":{"id":"doi:10.1093/bib/bbae035","is_oa":true,"landing_page_url":"https://doi.org/10.1093/bib/bbae035","pdf_url":"https://academic.oup.com/bib/article-pdf/25/2/bbae035/56663456/bbae035.pdf","source":{"id":"https://openalex.org/S91767247","display_name":"Briefings in Bioinformatics","issn_l":"1467-5463","issn":["1467-5463","1477-4054"],"is_oa":true,"is_in_doaj":true,"is_core":true,"host_organization":"https://openalex.org/P4310311648","host_organization_name":"Oxford University Press","host_organization_lineage":["https://openalex.org/P4310311648","https://openalex.org/P4310311647"],"host_organization_lineage_names":["Oxford University Press","University of Oxford"],"type":"journal"},"license":"cc-by","license_id":"https://openalex.org/licenses/cc-by","version":"publishedVersion","is_accepted":true,"is_published":true,"raw_source_name":"Briefings in Bioinformatics","raw_type":"journal-article"},"type":"article","indexed_in":["crossref","doaj","pubmed"],"open_access":{"is_oa":true,"oa_status":"gold","oa_url":"https://academic.oup.com/bib/article-pdf/25/2/bbae035/56663456/bbae035.pdf","any_repository_has_fulltext":true},"authorships":[{"author_position":"first","author":{"id":"https://openalex.org/A5038163115","display_name":"Seokjin Han","orcid":"https://orcid.org/0000-0002-1551-0658"},"institutions":[],"countries":[],"is_corresponding":true,"raw_author_name":"Seokjin Han","raw_affiliation_strings":["Standigm Inc. , Nonhyeon-ro 85-gil, 06234, Seoul , Republic of Korea"],"raw_orcid":"https://orcid.org/0000-0002-1551-0658","affiliations":[{"raw_affiliation_string":"Standigm Inc. , Nonhyeon-ro 85-gil, 06234, Seoul , Republic of Korea","institution_ids":[]}]},{"author_position":"middle","author":{"id":"https://openalex.org/A5118899219","display_name":"Ji Eun Lee","orcid":null},"institutions":[{"id":"https://openalex.org/I138925566","display_name":"Ewha Womans University","ror":"https://ror.org/053fp5c05","country_code":"KR","type":"education","lineage":["https://openalex.org/I138925566"]}],"countries":["KR"],"is_corresponding":false,"raw_author_name":"Ji Eun Lee","raw_affiliation_strings":["College of Pharmacy, Ewha Womans University , Ewhayeodae-gil, 03760, Seoul , Republic of Korea","Standigm Inc. , Nonhyeon-ro 85-gil, 06234, Seoul , Republic of Korea"],"raw_orcid":null,"affiliations":[{"raw_affiliation_string":"College of Pharmacy, Ewha Womans University , Ewhayeodae-gil, 03760, Seoul , Republic of Korea","institution_ids":["https://openalex.org/I138925566"]},{"raw_affiliation_string":"Standigm Inc. , Nonhyeon-ro 85-gil, 06234, Seoul , Republic of Korea","institution_ids":[]}]},{"author_position":"middle","author":{"id":"https://openalex.org/A5109682640","display_name":"Seolhee Kang","orcid":null},"institutions":[],"countries":[],"is_corresponding":false,"raw_author_name":"Seolhee Kang","raw_affiliation_strings":["Standigm Inc. , Nonhyeon-ro 85-gil, 06234, Seoul , Republic of Korea"],"raw_orcid":null,"affiliations":[{"raw_affiliation_string":"Standigm Inc. , Nonhyeon-ro 85-gil, 06234, Seoul , Republic of Korea","institution_ids":[]}]},{"author_position":"middle","author":{"id":"https://openalex.org/A5013892174","display_name":"Minyoung So","orcid":null},"institutions":[],"countries":[],"is_corresponding":false,"raw_author_name":"Minyoung So","raw_affiliation_strings":["Standigm Inc. , Nonhyeon-ro 85-gil, 06234, Seoul , Republic of Korea"],"raw_orcid":null,"affiliations":[{"raw_affiliation_string":"Standigm Inc. , Nonhyeon-ro 85-gil, 06234, Seoul , Republic of Korea","institution_ids":[]}]},{"author_position":"middle","author":{"id":"https://openalex.org/A5024494626","display_name":"Hee Kyung Jin","orcid":"https://orcid.org/0000-0001-6403-008X"},"institutions":[{"id":"https://openalex.org/I138925566","display_name":"Ewha Womans University","ror":"https://ror.org/053fp5c05","country_code":"KR","type":"education","lineage":["https://openalex.org/I138925566"]}],"countries":["KR"],"is_corresponding":false,"raw_author_name":"Hee Jin","raw_affiliation_strings":["College of Pharmacy, Ewha Womans University , Ewhayeodae-gil, 03760, Seoul , Republic of Korea"],"raw_orcid":null,"affiliations":[{"raw_affiliation_string":"College of Pharmacy, Ewha Womans University , Ewhayeodae-gil, 03760, Seoul , Republic of Korea","institution_ids":["https://openalex.org/I138925566"]}]},{"author_position":"middle","author":{"id":"https://openalex.org/A5101445590","display_name":"Jang Ho Lee","orcid":"https://orcid.org/0000-0003-2767-3881"},"institutions":[{"id":"https://openalex.org/I138925566","display_name":"Ewha Womans University","ror":"https://ror.org/053fp5c05","country_code":"KR","type":"education","lineage":["https://openalex.org/I138925566"]}],"countries":["KR"],"is_corresponding":false,"raw_author_name":"Jang Ho Lee","raw_affiliation_strings":["College of Pharmacy, Ewha Womans University , Ewhayeodae-gil, 03760, Seoul , Republic of Korea","Standigm Inc. , Nonhyeon-ro 85-gil, 06234, Seoul , Republic of Korea"],"raw_orcid":null,"affiliations":[{"raw_affiliation_string":"College of Pharmacy, Ewha Womans University , Ewhayeodae-gil, 03760, Seoul , Republic of Korea","institution_ids":["https://openalex.org/I138925566"]},{"raw_affiliation_string":"Standigm Inc. , Nonhyeon-ro 85-gil, 06234, Seoul , Republic of Korea","institution_ids":[]}]},{"author_position":"middle","author":{"id":"https://openalex.org/A5085357174","display_name":"Sunghyeob Baek","orcid":null},"institutions":[],"countries":[],"is_corresponding":false,"raw_author_name":"Sunghyeob Baek","raw_affiliation_strings":["Standigm Inc. , Nonhyeon-ro 85-gil, 06234, Seoul , Republic of Korea"],"raw_orcid":null,"affiliations":[{"raw_affiliation_string":"Standigm Inc. , Nonhyeon-ro 85-gil, 06234, Seoul , Republic of Korea","institution_ids":[]}]},{"author_position":"middle","author":{"id":"https://openalex.org/A5111129103","display_name":"Hyungjin Jun","orcid":null},"institutions":[],"countries":[],"is_corresponding":false,"raw_author_name":"Hyungjin Jun","raw_affiliation_strings":["Standigm Inc. , Nonhyeon-ro 85-gil, 06234, Seoul , Republic of Korea"],"raw_orcid":null,"affiliations":[{"raw_affiliation_string":"Standigm Inc. , Nonhyeon-ro 85-gil, 06234, Seoul , Republic of Korea","institution_ids":[]}]},{"author_position":"middle","author":{"id":"https://openalex.org/A5102873017","display_name":"Tae Yong Kim","orcid":"https://orcid.org/0000-0002-2249-6938"},"institutions":[],"countries":[],"is_corresponding":false,"raw_author_name":"Tae Yong Kim","raw_affiliation_strings":["Standigm Inc. , Nonhyeon-ro 85-gil, 06234, Seoul , Republic of Korea"],"raw_orcid":"https://orcid.org/0000-0002-2249-6938","affiliations":[{"raw_affiliation_string":"Standigm Inc. , Nonhyeon-ro 85-gil, 06234, Seoul , Republic of Korea","institution_ids":[]}]},{"author_position":"last","author":{"id":"https://openalex.org/A5067207199","display_name":"Yun\u2010Sil Lee","orcid":"https://orcid.org/0000-0002-7538-8850"},"institutions":[{"id":"https://openalex.org/I138925566","display_name":"Ewha Womans University","ror":"https://ror.org/053fp5c05","country_code":"KR","type":"education","lineage":["https://openalex.org/I138925566"]}],"countries":["KR"],"is_corresponding":true,"raw_author_name":"Yun-Sil Lee","raw_affiliation_strings":["College of Pharmacy, Ewha Womans University , Ewhayeodae-gil, 03760, Seoul , Republic of Korea"],"raw_orcid":null,"affiliations":[{"raw_affiliation_string":"College of Pharmacy, Ewha Womans University , Ewhayeodae-gil, 03760, Seoul , Republic of Korea","institution_ids":["https://openalex.org/I138925566"]}]}],"institutions":[],"countries_distinct_count":1,"institutions_distinct_count":1,"corresponding_author_ids":["https://openalex.org/A5038163115","https://openalex.org/A5067207199"],"corresponding_institution_ids":["https://openalex.org/I138925566"],"apc_list":{"value":3922,"currency":"USD","value_usd":3922},"apc_paid":{"value":3922,"currency":"USD","value_usd":3922},"fwci":4.6634,"has_fulltext":true,"cited_by_count":17,"citation_normalized_percentile":{"value":0.95570022,"is_in_top_1_percent":false,"is_in_top_10_percent":true},"cited_by_percentile_year":{"min":96,"max":100},"biblio":{"volume":"25","issue":"2","first_page":null,"last_page":null},"is_retracted":false,"is_paratext":false,"is_xpac":false,"primary_topic":{"id":"https://openalex.org/T10870","display_name":"Interstitial Lung Diseases and Idiopathic Pulmonary Fibrosis","score":0.9990000128746033,"subfield":{"id":"https://openalex.org/subfields/2740","display_name":"Pulmonary and Respiratory Medicine"},"field":{"id":"https://openalex.org/fields/27","display_name":"Medicine"},"domain":{"id":"https://openalex.org/domains/4","display_name":"Health Sciences"}},"topics":[{"id":"https://openalex.org/T10870","display_name":"Interstitial Lung Diseases and Idiopathic Pulmonary Fibrosis","score":0.9990000128746033,"subfield":{"id":"https://openalex.org/subfields/2740","display_name":"Pulmonary and Respiratory Medicine"},"field":{"id":"https://openalex.org/fields/27","display_name":"Medicine"},"domain":{"id":"https://openalex.org/domains/4","display_name":"Health Sciences"}},{"id":"https://openalex.org/T10417","display_name":"Lung Cancer Treatments and Mutations","score":0.9639999866485596,"subfield":{"id":"https://openalex.org/subfields/2740","display_name":"Pulmonary and Respiratory Medicine"},"field":{"id":"https://openalex.org/fields/27","display_name":"Medicine"},"domain":{"id":"https://openalex.org/domains/4","display_name":"Health Sciences"}},{"id":"https://openalex.org/T13157","display_name":"Cancer-related gene regulation","score":0.9496999979019165,"subfield":{"id":"https://openalex.org/subfields/1312","display_name":"Molecular Biology"},"field":{"id":"https://openalex.org/fields/13","display_name":"Biochemistry, Genetics and Molecular Biology"},"domain":{"id":"https://openalex.org/domains/1","display_name":"Life Sciences"}}],"keywords":[{"id":"https://openalex.org/keywords/ask-price","display_name":"Ask price","score":0.8191796541213989},{"id":"https://openalex.org/keywords/drug-discovery","display_name":"Drug discovery","score":0.570099949836731},{"id":"https://openalex.org/keywords/idiopathic-pulmonary-fibrosis","display_name":"Idiopathic pulmonary fibrosis","score":0.5479353666305542},{"id":"https://openalex.org/keywords/decipher","display_name":"DECIPHER","score":0.5196334719657898},{"id":"https://openalex.org/keywords/computational-biology","display_name":"Computational biology","score":0.49902892112731934},{"id":"https://openalex.org/keywords/drug-target","display_name":"Drug target","score":0.44741833209991455},{"id":"https://openalex.org/keywords/computer-science","display_name":"Computer science","score":0.38941138982772827},{"id":"https://openalex.org/keywords/medicine","display_name":"Medicine","score":0.34077009558677673},{"id":"https://openalex.org/keywords/biology","display_name":"Biology","score":0.33674225211143494},{"id":"https://openalex.org/keywords/bioinformatics","display_name":"Bioinformatics","score":0.29843664169311523},{"id":"https://openalex.org/keywords/cancer-research","display_name":"Cancer research","score":0.1902087926864624},{"id":"https://openalex.org/keywords/lung","display_name":"Lung","score":0.15473997592926025}],"concepts":[{"id":"https://openalex.org/C90329073","wikidata":"https://www.wikidata.org/wiki/Q914232","display_name":"Ask price","level":2,"score":0.8191796541213989},{"id":"https://openalex.org/C74187038","wikidata":"https://www.wikidata.org/wiki/Q1418791","display_name":"Drug discovery","level":2,"score":0.570099949836731},{"id":"https://openalex.org/C2778341716","wikidata":"https://www.wikidata.org/wiki/Q2290446","display_name":"Idiopathic pulmonary fibrosis","level":3,"score":0.5479353666305542},{"id":"https://openalex.org/C164614171","wikidata":"https://www.wikidata.org/wiki/Q5204775","display_name":"DECIPHER","level":2,"score":0.5196334719657898},{"id":"https://openalex.org/C70721500","wikidata":"https://www.wikidata.org/wiki/Q177005","display_name":"Computational biology","level":1,"score":0.49902892112731934},{"id":"https://openalex.org/C2989108626","wikidata":"https://www.wikidata.org/wiki/Q904407","display_name":"Drug target","level":2,"score":0.44741833209991455},{"id":"https://openalex.org/C41008148","wikidata":"https://www.wikidata.org/wiki/Q21198","display_name":"Computer science","level":0,"score":0.38941138982772827},{"id":"https://openalex.org/C71924100","wikidata":"https://www.wikidata.org/wiki/Q11190","display_name":"Medicine","level":0,"score":0.34077009558677673},{"id":"https://openalex.org/C86803240","wikidata":"https://www.wikidata.org/wiki/Q420","display_name":"Biology","level":0,"score":0.33674225211143494},{"id":"https://openalex.org/C60644358","wikidata":"https://www.wikidata.org/wiki/Q128570","display_name":"Bioinformatics","level":1,"score":0.29843664169311523},{"id":"https://openalex.org/C502942594","wikidata":"https://www.wikidata.org/wiki/Q3421914","display_name":"Cancer research","level":1,"score":0.1902087926864624},{"id":"https://openalex.org/C2777714996","wikidata":"https://www.wikidata.org/wiki/Q7886","display_name":"Lung","level":2,"score":0.15473997592926025},{"id":"https://openalex.org/C136264566","wikidata":"https://www.wikidata.org/wiki/Q159810","display_name":"Economy","level":1,"score":0.0},{"id":"https://openalex.org/C126322002","wikidata":"https://www.wikidata.org/wiki/Q11180","display_name":"Internal medicine","level":1,"score":0.0},{"id":"https://openalex.org/C162324750","wikidata":"https://www.wikidata.org/wiki/Q8134","display_name":"Economics","level":0,"score":0.0}],"mesh":[{"descriptor_ui":"D001185","descriptor_name":"Artificial Intelligence","qualifier_ui":null,"qualifier_name":null,"is_major_topic":true},{"descriptor_ui":"D001185","descriptor_name":"Artificial Intelligence","qualifier_ui":null,"qualifier_name":null,"is_major_topic":true},{"descriptor_ui":"D001185","descriptor_name":"Artificial Intelligence","qualifier_ui":null,"qualifier_name":null,"is_major_topic":true},{"descriptor_ui":"D001185","descriptor_name":"Artificial Intelligence","qualifier_ui":null,"qualifier_name":null,"is_major_topic":true},{"descriptor_ui":"D001185","descriptor_name":"Artificial Intelligence","qualifier_ui":null,"qualifier_name":null,"is_major_topic":true},{"descriptor_ui":"D001185","descriptor_name":"Artificial Intelligence","qualifier_ui":null,"qualifier_name":null,"is_major_topic":true},{"descriptor_ui":"D006801","descriptor_name":"Humans","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D006801","descriptor_name":"Humans","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D006801","descriptor_name":"Humans","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D006801","descriptor_name":"Humans","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D006801","descriptor_name":"Humans","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D006801","descriptor_name":"Humans","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D008168","descriptor_name":"Lung","qualifier_ui":"Q000378","qualifier_name":"metabolism","is_major_topic":false},{"descriptor_ui":"D008168","descriptor_name":"Lung","qualifier_ui":"Q000378","qualifier_name":"metabolism","is_major_topic":false},{"descriptor_ui":"D008168","descriptor_name":"Lung","qualifier_ui":"Q000378","qualifier_name":"metabolism","is_major_topic":false},{"descriptor_ui":"D008168","descriptor_name":"Lung","qualifier_ui":"Q000378","qualifier_name":"metabolism","is_major_topic":false},{"descriptor_ui":"D008168","descriptor_name":"Lung","qualifier_ui":"Q000378","qualifier_name":"metabolism","is_major_topic":false},{"descriptor_ui":"D008168","descriptor_name":"Lung","qualifier_ui":"Q000378","qualifier_name":"metabolism","is_major_topic":false},{"descriptor_ui":"D010363","descriptor_name":"Pattern Recognition, Automated","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D010363","descriptor_name":"Pattern Recognition, Automated","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D010363","descriptor_name":"Pattern Recognition, Automated","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D010363","descriptor_name":"Pattern Recognition, Automated","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D010363","descriptor_name":"Pattern Recognition, Automated","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D010363","descriptor_name":"Pattern Recognition, Automated","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D054990","descriptor_name":"Idiopathic Pulmonary Fibrosis","qualifier_ui":"Q000188","qualifier_name":"drug therapy","is_major_topic":true},{"descriptor_ui":"D054990","descriptor_name":"Idiopathic Pulmonary Fibrosis","qualifier_ui":"Q000188","qualifier_name":"drug therapy","is_major_topic":true},{"descriptor_ui":"D054990","descriptor_name":"Idiopathic Pulmonary Fibrosis","qualifier_ui":"Q000188","qualifier_name":"drug therapy","is_major_topic":true},{"descriptor_ui":"D054990","descriptor_name":"Idiopathic Pulmonary Fibrosis","qualifier_ui":"Q000188","qualifier_name":"drug therapy","is_major_topic":true},{"descriptor_ui":"D054990","descriptor_name":"Idiopathic Pulmonary Fibrosis","qualifier_ui":"Q000188","qualifier_name":"drug therapy","is_major_topic":true},{"descriptor_ui":"D054990","descriptor_name":"Idiopathic Pulmonary Fibrosis","qualifier_ui":"Q000188","qualifier_name":"drug therapy","is_major_topic":true},{"descriptor_ui":"D054990","descriptor_name":"Idiopathic Pulmonary Fibrosis","qualifier_ui":"Q000235","qualifier_name":"genetics","is_major_topic":true},{"descriptor_ui":"D054990","descriptor_name":"Idiopathic Pulmonary Fibrosis","qualifier_ui":"Q000235","qualifier_name":"genetics","is_major_topic":true},{"descriptor_ui":"D054990","descriptor_name":"Idiopathic Pulmonary Fibrosis","qualifier_ui":"Q000235","qualifier_name":"genetics","is_major_topic":true},{"descriptor_ui":"D054990","descriptor_name":"Idiopathic Pulmonary Fibrosis","qualifier_ui":"Q000235","qualifier_name":"genetics","is_major_topic":true},{"descriptor_ui":"D054990","descriptor_name":"Idiopathic Pulmonary Fibrosis","qualifier_ui":"Q000235","qualifier_name":"genetics","is_major_topic":true},{"descriptor_ui":"D054990","descriptor_name":"Idiopathic Pulmonary Fibrosis","qualifier_ui":"Q000235","qualifier_name":"genetics","is_major_topic":true}],"locations_count":3,"locations":[{"id":"doi:10.1093/bib/bbae035","is_oa":true,"landing_page_url":"https://doi.org/10.1093/bib/bbae035","pdf_url":"https://academic.oup.com/bib/article-pdf/25/2/bbae035/56663456/bbae035.pdf","source":{"id":"https://openalex.org/S91767247","display_name":"Briefings in Bioinformatics","issn_l":"1467-5463","issn":["1467-5463","1477-4054"],"is_oa":true,"is_in_doaj":true,"is_core":true,"host_organization":"https://openalex.org/P4310311648","host_organization_name":"Oxford University Press","host_organization_lineage":["https://openalex.org/P4310311648","https://openalex.org/P4310311647"],"host_organization_lineage_names":["Oxford University Press","University of Oxford"],"type":"journal"},"license":"cc-by","license_id":"https://openalex.org/licenses/cc-by","version":"publishedVersion","is_accepted":true,"is_published":true,"raw_source_name":"Briefings in Bioinformatics","raw_type":"journal-article"},{"id":"pmid:38349059","is_oa":false,"landing_page_url":"https://pubmed.ncbi.nlm.nih.gov/38349059","pdf_url":null,"source":{"id":"https://openalex.org/S4306525036","display_name":"PubMed","issn_l":null,"issn":null,"is_oa":false,"is_in_doaj":false,"is_core":false,"host_organization":"https://openalex.org/I1299303238","host_organization_name":"National Institutes of Health","host_organization_lineage":["https://openalex.org/I1299303238"],"host_organization_lineage_names":[],"type":"repository"},"license":null,"license_id":null,"version":"publishedVersion","is_accepted":true,"is_published":true,"raw_source_name":"Briefings in bioinformatics","raw_type":"Journal Article"},{"id":"pmh:oai:pubmedcentral.nih.gov:10862655","is_oa":true,"landing_page_url":"https://www.ncbi.nlm.nih.gov/pmc/articles/10862655","pdf_url":"https://pmc.ncbi.nlm.nih.gov/articles/PMC10862655/pdf/bbae035.pdf","source":{"id":"https://openalex.org/S2764455111","display_name":"PubMed Central","issn_l":null,"issn":null,"is_oa":true,"is_in_doaj":false,"is_core":false,"host_organization":"https://openalex.org/I1299303238","host_organization_name":"National Institutes of Health","host_organization_lineage":["https://openalex.org/I1299303238"],"host_organization_lineage_names":[],"type":"repository"},"license":"cc-by","license_id":"https://openalex.org/licenses/cc-by","version":"submittedVersion","is_accepted":false,"is_published":false,"raw_source_name":"Brief Bioinform","raw_type":"Text"}],"best_oa_location":{"id":"doi:10.1093/bib/bbae035","is_oa":true,"landing_page_url":"https://doi.org/10.1093/bib/bbae035","pdf_url":"https://academic.oup.com/bib/article-pdf/25/2/bbae035/56663456/bbae035.pdf","source":{"id":"https://openalex.org/S91767247","display_name":"Briefings in Bioinformatics","issn_l":"1467-5463","issn":["1467-5463","1477-4054"],"is_oa":true,"is_in_doaj":true,"is_core":true,"host_organization":"https://openalex.org/P4310311648","host_organization_name":"Oxford University Press","host_organization_lineage":["https://openalex.org/P4310311648","https://openalex.org/P4310311647"],"host_organization_lineage_names":["Oxford University Press","University of Oxford"],"type":"journal"},"license":"cc-by","license_id":"https://openalex.org/licenses/cc-by","version":"publishedVersion","is_accepted":true,"is_published":true,"raw_source_name":"Briefings in Bioinformatics","raw_type":"journal-article"},"sustainable_development_goals":[{"display_name":"Good health and well-being","score":0.6299999952316284,"id":"https://metadata.un.org/sdg/3"}],"awards":[{"id":"https://openalex.org/G2403643542","display_name":null,"funder_award_id":"- 2018R1A5A2025286","funder_id":"https://openalex.org/F4320322120","funder_display_name":"National Research Foundation of Korea"},{"id":"https://openalex.org/G3253106339","display_name":null,"funder_award_id":"NRF-2018R1A5A2025286","funder_id":"https://openalex.org/F4320322120","funder_display_name":"National Research Foundation of Korea"},{"id":"https://openalex.org/G3420266028","display_name":null,"funder_award_id":"NRF-2020M2D9A2093974","funder_id":"https://openalex.org/F4320322120","funder_display_name":"National Research Foundation of Korea"},{"id":"https://openalex.org/G3706269942","display_name":null,"funder_award_id":"2018R1A5A2025286","funder_id":"https://openalex.org/F4320328359","funder_display_name":"Ministry of Science and ICT, South Korea"},{"id":"https://openalex.org/G41768991","display_name":null,"funder_award_id":"NRF-2018R1A5A2025286","funder_id":"https://openalex.org/F4320328359","funder_display_name":"Ministry of Science and ICT, South Korea"},{"id":"https://openalex.org/G7304278917","display_name":null,"funder_award_id":"2018R1A5A2025286","funder_id":"https://openalex.org/F4320320671","funder_display_name":"National Research Foundation"}],"funders":[{"id":"https://openalex.org/F4320320671","display_name":"National Research Foundation","ror":"https://ror.org/05s0g1g46"},{"id":"https://openalex.org/F4320322120","display_name":"National Research Foundation of Korea","ror":"https://ror.org/013aysd81"},{"id":"https://openalex.org/F4320328359","display_name":"Ministry of Science and ICT, South Korea","ror":"https://ror.org/01wpjm123"}],"has_content":{"pdf":true,"grobid_xml":true},"content_urls":{"pdf":"https://content.openalex.org/works/W4391788768.pdf","grobid_xml":"https://content.openalex.org/works/W4391788768.grobid-xml"},"referenced_works_count":109,"referenced_works":["https://openalex.org/W1644197353","https://openalex.org/W1902773741","https://openalex.org/W1968598835","https://openalex.org/W1980377268","https://openalex.org/W1985507724","https://openalex.org/W1989277387","https://openalex.org/W1994803330","https://openalex.org/W1997362383","https://openalex.org/W2009019945","https://openalex.org/W2043764521","https://openalex.org/W2053039860","https://openalex.org/W2067305633","https://openalex.org/W2067803871","https://openalex.org/W2069440750","https://openalex.org/W2081375228","https://openalex.org/W2095867585","https://openalex.org/W2103017472","https://openalex.org/W2107648723","https://openalex.org/W2115086145","https://openalex.org/W2116034137","https://openalex.org/W2117488044","https://openalex.org/W2138871107","https://openalex.org/W2143742443","https://openalex.org/W2147018385","https://openalex.org/W2148145769","https://openalex.org/W2153838454","https://openalex.org/W2161607603","https://openalex.org/W2163538836","https://openalex.org/W2168666423","https://openalex.org/W2204695023","https://openalex.org/W2235270260","https://openalex.org/W2258573009","https://openalex.org/W2273267066","https://openalex.org/W2299417213","https://openalex.org/W2352062691","https://openalex.org/W2462053388","https://openalex.org/W2474397968","https://openalex.org/W2539985226","https://openalex.org/W2547330766","https://openalex.org/W2558999090","https://openalex.org/W2564726295","https://openalex.org/W2599075603","https://openalex.org/W2612467560","https://openalex.org/W2626588662","https://openalex.org/W2754937980","https://openalex.org/W2768921712","https://openalex.org/W2782454362","https://openalex.org/W2783038509","https://openalex.org/W2900569176","https://openalex.org/W2900668971","https://openalex.org/W2901303766","https://openalex.org/W2911932738","https://openalex.org/W2913754224","https://openalex.org/W2916047525","https://openalex.org/W2917858269","https://openalex.org/W2927686296","https://openalex.org/W2936143288","https://openalex.org/W2939069983","https://openalex.org/W2942026896","https://openalex.org/W2949311246","https://openalex.org/W2950595506","https://openalex.org/W2950860419","https://openalex.org/W2981350712","https://openalex.org/W2983166786","https://openalex.org/W3015964336","https://openalex.org/W3020759564","https://openalex.org/W3032787166","https://openalex.org/W3043274284","https://openalex.org/W3047777264","https://openalex.org/W3093988619","https://openalex.org/W3099179819","https://openalex.org/W3109918486","https://openalex.org/W3116099552","https://openalex.org/W3132689447","https://openalex.org/W3153892226","https://openalex.org/W3156260318","https://openalex.org/W3177828909","https://openalex.org/W3179963059","https://openalex.org/W3181518724","https://openalex.org/W3194953155","https://openalex.org/W3194979994","https://openalex.org/W3197008538","https://openalex.org/W3203135092","https://openalex.org/W3207365242","https://openalex.org/W3211402536","https://openalex.org/W3217681006","https://openalex.org/W4210493972","https://openalex.org/W4210706440","https://openalex.org/W4211238337","https://openalex.org/W4214870528","https://openalex.org/W4231254854","https://openalex.org/W4292289324","https://openalex.org/W4313642858","https://openalex.org/W4318983406","https://openalex.org/W4319599125","https://openalex.org/W4367673946","https://openalex.org/W4377193391","https://openalex.org/W4378953498","https://openalex.org/W4382630911","https://openalex.org/W4384821676","https://openalex.org/W4385245566","https://openalex.org/W4386703843","https://openalex.org/W6690063377","https://openalex.org/W6705473205","https://openalex.org/W6739901393","https://openalex.org/W6761783306","https://openalex.org/W6768806997","https://openalex.org/W6813094581","https://openalex.org/W6893865720"],"related_works":["https://openalex.org/W2509838516","https://openalex.org/W4288406183","https://openalex.org/W2553548503","https://openalex.org/W3045995536","https://openalex.org/W1967404732","https://openalex.org/W2226749982","https://openalex.org/W1968386238","https://openalex.org/W4308253407","https://openalex.org/W4353017618","https://openalex.org/W4310831746"],"abstract_inverted_index":{"Standigm":[0,23,52,61,120],"ASK\u2122":[1,24,53,62,121],"revolutionizes":[2],"healthcare":[3],"by":[4,138],"addressing":[5],"the":[6,55,139],"critical":[7],"challenge":[8],"of":[9,19,29,57,143],"identifying":[10,107],"pivotal":[11],"target":[12,135],"genes":[13,75],"in":[14,133],"disease":[15],"mechanisms-a":[16],"fundamental":[17],"aspect":[18],"drug":[20,134],"development":[21],"success.":[22],"integrates":[25],"a":[26,30,68],"unique":[27],"combination":[28],"heterogeneous":[31],"knowledge":[32],"graph":[33],"(KG)":[34],"database":[35],"and":[36,78,110,127,141],"an":[37,49,124],"attention-based":[38],"neural":[39],"network":[40],"model,":[41],"providing":[42],"interpretable":[43],"subgraph":[44],"evidence.":[45,83],"Empowering":[46],"users":[47],"through":[48,81],"interactive":[50],"interface,":[51],"facilitates":[54],"exploration":[56],"predicted":[58],"results.":[59],"Applying":[60],"to":[63],"idiopathic":[64],"pulmonary":[65],"fibrosis":[66],"(IPF),":[67],"complex":[69],"lung":[70],"disease,":[71],"we":[72],"focused":[73],"on":[74],"(AMFR,":[76],"MDFIC":[77,109],"NR5A2)":[79],"identified":[80],"KG":[82,126],"In":[84,118],"vitro":[85],"experiments":[86],"demonstrated":[87],"their":[88],"relevance,":[89],"as":[90,112,123],"TGF\u03b2":[91],"treatment":[92],"induced":[93],"gene":[94],"expression":[95],"changes":[96],"associated":[97],"with":[98],"epithelial-mesenchymal":[99],"transition":[100],"characteristics.":[101],"Gene":[102],"knockdown":[103],"reversed":[104],"these":[105],"changes,":[106],"AMFR,":[108],"NR5A2":[111],"potential":[113],"therapeutic":[114,144],"targets":[115,145],"for":[116,146],"IPF.":[117,147],"summary,":[119],"emerges":[122],"innovative":[125],"artificial":[128],"intelligence":[129],"platform":[130],"driving":[131],"insights":[132],"discovery,":[136],"exemplified":[137],"identification":[140],"validation":[142]},"counts_by_year":[{"year":2026,"cited_by_count":10},{"year":2025,"cited_by_count":4},{"year":2024,"cited_by_count":3}],"updated_date":"2026-08-28T12:50:07.497085","created_date":"2025-10-10T00:00:00"}
