{"id":"https://openalex.org/W4391217521","doi":"https://doi.org/10.1093/bib/bbad528","title":"MyoV: a deep learning-based tool for the automated quantification of muscle fibers","display_name":"MyoV: a deep learning-based tool for the automated quantification of muscle fibers","publication_year":2024,"publication_date":"2024-01-22","ids":{"openalex":"https://openalex.org/W4391217521","doi":"https://doi.org/10.1093/bib/bbad528","pmid":"https://pubmed.ncbi.nlm.nih.gov/38271484"},"language":"en","primary_location":{"id":"doi:10.1093/bib/bbad528","is_oa":true,"landing_page_url":"https://doi.org/10.1093/bib/bbad528","pdf_url":"https://academic.oup.com/bib/article-pdf/25/2/bbad528/56409882/bbad528.pdf","source":{"id":"https://openalex.org/S91767247","display_name":"Briefings in Bioinformatics","issn_l":"1467-5463","issn":["1467-5463","1477-4054"],"is_oa":true,"is_in_doaj":true,"is_core":true,"host_organization":"https://openalex.org/P4310311648","host_organization_name":"Oxford University Press","host_organization_lineage":["https://openalex.org/P4310311648","https://openalex.org/P4310311647"],"host_organization_lineage_names":["Oxford University Press","University of Oxford"],"type":"journal"},"license":"cc-by-nc","license_id":"https://openalex.org/licenses/cc-by-nc","version":"publishedVersion","is_accepted":true,"is_published":true,"raw_source_name":"Briefings in Bioinformatics","raw_type":"journal-article"},"type":"article","indexed_in":["crossref","doaj","pubmed"],"open_access":{"is_oa":true,"oa_status":"gold","oa_url":"https://academic.oup.com/bib/article-pdf/25/2/bbad528/56409882/bbad528.pdf","any_repository_has_fulltext":true},"authorships":[{"author_position":"first","author":{"id":"https://openalex.org/A5102700086","display_name":"Shuang Gu","orcid":null},"institutions":[{"id":"https://openalex.org/I4210151987","display_name":"Ministry of Agriculture and Rural Affairs","ror":"https://ror.org/05ckt8b96","country_code":"CN","type":"government","lineage":["https://openalex.org/I4210127390","https://openalex.org/I4210151987"]},{"id":"https://openalex.org/I52158045","display_name":"China Agricultural University","ror":"https://ror.org/04v3ywz14","country_code":"CN","type":"education","lineage":["https://openalex.org/I52158045"]}],"countries":["CN"],"is_corresponding":false,"raw_author_name":"Shuang Gu","raw_affiliation_strings":["Department of Animal Genetics and Breeding, College of Animal Science and Technology, China Agricultural University , Beijing, 100193, China","National Engineering Laboratory for Animal Breeding and Key Laboratory of Animal Genetics, Breeding and Reproduction, Ministry of Agriculture and Rural Affairs, China Agricultural University , Beijing 100193, China","State Key Laboratory of Animal Biotech Breeding and Frontier Science Center for Molecular Design Breeding, China Agricultural University , Beijing 100193, China"],"raw_orcid":null,"affiliations":[{"raw_affiliation_string":"Department of Animal Genetics and Breeding, College of Animal Science and Technology, China Agricultural University , Beijing, 100193, China","institution_ids":["https://openalex.org/I52158045"]},{"raw_affiliation_string":"National Engineering Laboratory for Animal Breeding and Key Laboratory of Animal Genetics, Breeding and Reproduction, Ministry of Agriculture and Rural Affairs, China Agricultural University , Beijing 100193, China","institution_ids":["https://openalex.org/I4210151987","https://openalex.org/I52158045"]},{"raw_affiliation_string":"State Key Laboratory of Animal Biotech Breeding and Frontier Science Center for Molecular Design Breeding, China Agricultural University , Beijing 100193, China","institution_ids":["https://openalex.org/I52158045"]}]},{"author_position":"middle","author":{"id":"https://openalex.org/A5030235521","display_name":"Chaoliang Wen","orcid":"https://orcid.org/0000-0002-0514-2847"},"institutions":[{"id":"https://openalex.org/I4210149102","display_name":"Sanya University","ror":"https://ror.org/04fa2qd52","country_code":"CN","type":"education","lineage":["https://openalex.org/I4210149102"]},{"id":"https://openalex.org/I4210151987","display_name":"Ministry of Agriculture and Rural Affairs","ror":"https://ror.org/05ckt8b96","country_code":"CN","type":"government","lineage":["https://openalex.org/I4210127390","https://openalex.org/I4210151987"]},{"id":"https://openalex.org/I52158045","display_name":"China Agricultural University","ror":"https://ror.org/04v3ywz14","country_code":"CN","type":"education","lineage":["https://openalex.org/I52158045"]}],"countries":["CN"],"is_corresponding":false,"raw_author_name":"Chaoliang Wen","raw_affiliation_strings":["Department of Animal Genetics and Breeding, College of Animal Science and Technology, China Agricultural University , Beijing, 100193, China","National Engineering Laboratory for Animal Breeding and Key Laboratory of Animal Genetics, Breeding and Reproduction, Ministry of Agriculture and Rural Affairs, China Agricultural University , Beijing 100193, China","Sanya Institute of China Agricultural University , Hainan 572025, China","State Key Laboratory of Animal Biotech Breeding and Frontier Science Center for Molecular Design Breeding, China Agricultural University , Beijing 100193, China"],"raw_orcid":null,"affiliations":[{"raw_affiliation_string":"Department of Animal Genetics and Breeding, College of Animal Science and Technology, China Agricultural University , Beijing, 100193, China","institution_ids":["https://openalex.org/I52158045"]},{"raw_affiliation_string":"National Engineering Laboratory for Animal Breeding and Key Laboratory of Animal Genetics, Breeding and Reproduction, Ministry of Agriculture and Rural Affairs, China Agricultural University , Beijing 100193, China","institution_ids":["https://openalex.org/I4210151987","https://openalex.org/I52158045"]},{"raw_affiliation_string":"Sanya Institute of China Agricultural University , Hainan 572025, China","institution_ids":["https://openalex.org/I4210149102","https://openalex.org/I52158045"]},{"raw_affiliation_string":"State Key Laboratory of Animal Biotech Breeding and Frontier Science Center for Molecular Design Breeding, China Agricultural University , Beijing 100193, China","institution_ids":["https://openalex.org/I52158045"]}]},{"author_position":"middle","author":{"id":"https://openalex.org/A5100519242","display_name":"Zhen Xiao","orcid":"https://orcid.org/0009-0003-9885-5217"},"institutions":[{"id":"https://openalex.org/I16365422","display_name":"Hefei University of Technology","ror":"https://ror.org/02czkny70","country_code":"CN","type":"education","lineage":["https://openalex.org/I16365422"]}],"countries":["CN"],"is_corresponding":false,"raw_author_name":"Zhen Xiao","raw_affiliation_strings":["School of Computer and Information, Hefei University of Technology , Anhui 230009, China"],"raw_orcid":null,"affiliations":[{"raw_affiliation_string":"School of Computer and Information, Hefei University of Technology , Anhui 230009, China","institution_ids":["https://openalex.org/I16365422"]}]},{"author_position":"middle","author":{"id":"https://openalex.org/A5013817745","display_name":"Qiang Huang","orcid":"https://orcid.org/0000-0003-1120-4685"},"institutions":[{"id":"https://openalex.org/I4210151987","display_name":"Ministry of Agriculture and Rural Affairs","ror":"https://ror.org/05ckt8b96","country_code":"CN","type":"government","lineage":["https://openalex.org/I4210127390","https://openalex.org/I4210151987"]},{"id":"https://openalex.org/I52158045","display_name":"China Agricultural University","ror":"https://ror.org/04v3ywz14","country_code":"CN","type":"education","lineage":["https://openalex.org/I52158045"]}],"countries":["CN"],"is_corresponding":false,"raw_author_name":"Qiang Huang","raw_affiliation_strings":["Department of Animal Genetics and Breeding, College of Animal Science and Technology, China Agricultural University , Beijing, 100193, China","National Engineering Laboratory for Animal Breeding and Key Laboratory of Animal Genetics, Breeding and Reproduction, Ministry of Agriculture and Rural Affairs, China Agricultural University , Beijing 100193, China","State Key Laboratory of Animal Biotech Breeding and Frontier Science Center for Molecular Design Breeding, China Agricultural University , Beijing 100193, China"],"raw_orcid":null,"affiliations":[{"raw_affiliation_string":"Department of Animal Genetics and Breeding, College of Animal Science and Technology, China Agricultural University , Beijing, 100193, China","institution_ids":["https://openalex.org/I52158045"]},{"raw_affiliation_string":"National Engineering Laboratory for Animal Breeding and Key Laboratory of Animal Genetics, Breeding and Reproduction, Ministry of Agriculture and Rural Affairs, China Agricultural University , Beijing 100193, China","institution_ids":["https://openalex.org/I4210151987","https://openalex.org/I52158045"]},{"raw_affiliation_string":"State Key Laboratory of Animal Biotech Breeding and Frontier Science Center for Molecular Design Breeding, China Agricultural University , Beijing 100193, China","institution_ids":["https://openalex.org/I52158045"]}]},{"author_position":"middle","author":{"id":"https://openalex.org/A5035915052","display_name":"Zheyi Jiang","orcid":null},"institutions":[{"id":"https://openalex.org/I4210151987","display_name":"Ministry of Agriculture and Rural Affairs","ror":"https://ror.org/05ckt8b96","country_code":"CN","type":"government","lineage":["https://openalex.org/I4210127390","https://openalex.org/I4210151987"]},{"id":"https://openalex.org/I52158045","display_name":"China Agricultural University","ror":"https://ror.org/04v3ywz14","country_code":"CN","type":"education","lineage":["https://openalex.org/I52158045"]}],"countries":["CN"],"is_corresponding":false,"raw_author_name":"Zheyi Jiang","raw_affiliation_strings":["Department of Animal Genetics and Breeding, College of Animal Science and Technology, China Agricultural University , Beijing, 100193, China","National Engineering Laboratory for Animal Breeding and Key Laboratory of Animal Genetics, Breeding and Reproduction, Ministry of Agriculture and Rural Affairs, China Agricultural University , Beijing 100193, China","State Key Laboratory of Animal Biotech Breeding and Frontier Science Center for Molecular Design Breeding, China Agricultural University , Beijing 100193, China"],"raw_orcid":null,"affiliations":[{"raw_affiliation_string":"Department of Animal Genetics and Breeding, College of Animal Science and Technology, China Agricultural University , Beijing, 100193, China","institution_ids":["https://openalex.org/I52158045"]},{"raw_affiliation_string":"National Engineering Laboratory for Animal Breeding and Key Laboratory of Animal Genetics, Breeding and Reproduction, Ministry of Agriculture and Rural Affairs, China Agricultural University , Beijing 100193, China","institution_ids":["https://openalex.org/I4210151987","https://openalex.org/I52158045"]},{"raw_affiliation_string":"State Key Laboratory of Animal Biotech Breeding and Frontier Science Center for Molecular Design Breeding, China Agricultural University , Beijing 100193, China","institution_ids":["https://openalex.org/I52158045"]}]},{"author_position":"middle","author":{"id":"https://openalex.org/A5101991383","display_name":"Honghong Liu","orcid":"https://orcid.org/0009-0006-9260-2384"},"institutions":[{"id":"https://openalex.org/I4210151987","display_name":"Ministry of Agriculture and Rural Affairs","ror":"https://ror.org/05ckt8b96","country_code":"CN","type":"government","lineage":["https://openalex.org/I4210127390","https://openalex.org/I4210151987"]},{"id":"https://openalex.org/I52158045","display_name":"China Agricultural University","ror":"https://ror.org/04v3ywz14","country_code":"CN","type":"education","lineage":["https://openalex.org/I52158045"]}],"countries":["CN"],"is_corresponding":false,"raw_author_name":"Honghong Liu","raw_affiliation_strings":["Department of Animal Genetics and Breeding, College of Animal Science and Technology, China Agricultural University , Beijing, 100193, China","National Engineering Laboratory for Animal Breeding and Key Laboratory of Animal Genetics, Breeding and Reproduction, Ministry of Agriculture and Rural Affairs, China Agricultural University , Beijing 100193, China","State Key Laboratory of Animal Biotech Breeding and Frontier Science Center for Molecular Design Breeding, China Agricultural University , Beijing 100193, China"],"raw_orcid":null,"affiliations":[{"raw_affiliation_string":"Department of Animal Genetics and Breeding, College of Animal Science and Technology, China Agricultural University , Beijing, 100193, China","institution_ids":["https://openalex.org/I52158045"]},{"raw_affiliation_string":"National Engineering Laboratory for Animal Breeding and Key Laboratory of Animal Genetics, Breeding and Reproduction, Ministry of Agriculture and Rural Affairs, China Agricultural University , Beijing 100193, China","institution_ids":["https://openalex.org/I4210151987","https://openalex.org/I52158045"]},{"raw_affiliation_string":"State Key Laboratory of Animal Biotech Breeding and Frontier Science Center for Molecular Design Breeding, China Agricultural University , Beijing 100193, China","institution_ids":["https://openalex.org/I52158045"]}]},{"author_position":"middle","author":{"id":"https://openalex.org/A5101694207","display_name":"Jia Gao","orcid":"https://orcid.org/0000-0001-6203-209X"},"institutions":[{"id":"https://openalex.org/I4210151987","display_name":"Ministry of Agriculture and Rural Affairs","ror":"https://ror.org/05ckt8b96","country_code":"CN","type":"government","lineage":["https://openalex.org/I4210127390","https://openalex.org/I4210151987"]},{"id":"https://openalex.org/I52158045","display_name":"China Agricultural University","ror":"https://ror.org/04v3ywz14","country_code":"CN","type":"education","lineage":["https://openalex.org/I52158045"]}],"countries":["CN"],"is_corresponding":false,"raw_author_name":"Jia Gao","raw_affiliation_strings":["Department of Animal Genetics and Breeding, College of Animal Science and Technology, China Agricultural University , Beijing, 100193, China","National Engineering Laboratory for Animal Breeding and Key Laboratory of Animal Genetics, Breeding and Reproduction, Ministry of Agriculture and Rural Affairs, China Agricultural University , Beijing 100193, China","State Key Laboratory of Animal Biotech Breeding and Frontier Science Center for Molecular Design Breeding, China Agricultural University , Beijing 100193, China"],"raw_orcid":null,"affiliations":[{"raw_affiliation_string":"Department of Animal Genetics and Breeding, College of Animal Science and Technology, China Agricultural University , Beijing, 100193, China","institution_ids":["https://openalex.org/I52158045"]},{"raw_affiliation_string":"National Engineering Laboratory for Animal Breeding and Key Laboratory of Animal Genetics, Breeding and Reproduction, Ministry of Agriculture and Rural Affairs, China Agricultural University , Beijing 100193, China","institution_ids":["https://openalex.org/I4210151987","https://openalex.org/I52158045"]},{"raw_affiliation_string":"State Key Laboratory of Animal Biotech Breeding and Frontier Science Center for Molecular Design Breeding, China Agricultural University , Beijing 100193, China","institution_ids":["https://openalex.org/I52158045"]}]},{"author_position":"middle","author":{"id":"https://openalex.org/A5100759020","display_name":"Junying Li","orcid":"https://orcid.org/0000-0002-5782-2051"},"institutions":[{"id":"https://openalex.org/I4210149102","display_name":"Sanya University","ror":"https://ror.org/04fa2qd52","country_code":"CN","type":"education","lineage":["https://openalex.org/I4210149102"]},{"id":"https://openalex.org/I4210151987","display_name":"Ministry of Agriculture and Rural Affairs","ror":"https://ror.org/05ckt8b96","country_code":"CN","type":"government","lineage":["https://openalex.org/I4210127390","https://openalex.org/I4210151987"]},{"id":"https://openalex.org/I52158045","display_name":"China Agricultural University","ror":"https://ror.org/04v3ywz14","country_code":"CN","type":"education","lineage":["https://openalex.org/I52158045"]}],"countries":["CN"],"is_corresponding":false,"raw_author_name":"Junying Li","raw_affiliation_strings":["Department of Animal Genetics and Breeding, College of Animal Science and Technology, China Agricultural University , Beijing, 100193, China","National Engineering Laboratory for Animal Breeding and Key Laboratory of Animal Genetics, Breeding and Reproduction, Ministry of Agriculture and Rural Affairs, China Agricultural University , Beijing 100193, China","Sanya Institute of China Agricultural University , Hainan 572025, China","State Key Laboratory of Animal Biotech Breeding and Frontier Science Center for Molecular Design Breeding, China Agricultural University , Beijing 100193, China"],"raw_orcid":null,"affiliations":[{"raw_affiliation_string":"Department of Animal Genetics and Breeding, College of Animal Science and Technology, China Agricultural University , Beijing, 100193, China","institution_ids":["https://openalex.org/I52158045"]},{"raw_affiliation_string":"National Engineering Laboratory for Animal Breeding and Key Laboratory of Animal Genetics, Breeding and Reproduction, Ministry of Agriculture and Rural Affairs, China Agricultural University , Beijing 100193, China","institution_ids":["https://openalex.org/I4210151987","https://openalex.org/I52158045"]},{"raw_affiliation_string":"Sanya Institute of China Agricultural University , Hainan 572025, China","institution_ids":["https://openalex.org/I4210149102","https://openalex.org/I52158045"]},{"raw_affiliation_string":"State Key Laboratory of Animal Biotech Breeding and Frontier Science Center for Molecular Design Breeding, China Agricultural University , Beijing 100193, China","institution_ids":["https://openalex.org/I52158045"]}]},{"author_position":"middle","author":{"id":"https://openalex.org/A5101922267","display_name":"Congjiao Sun","orcid":"https://orcid.org/0000-0002-9673-9533"},"institutions":[{"id":"https://openalex.org/I4210149102","display_name":"Sanya University","ror":"https://ror.org/04fa2qd52","country_code":"CN","type":"education","lineage":["https://openalex.org/I4210149102"]},{"id":"https://openalex.org/I4210151987","display_name":"Ministry of Agriculture and Rural Affairs","ror":"https://ror.org/05ckt8b96","country_code":"CN","type":"government","lineage":["https://openalex.org/I4210127390","https://openalex.org/I4210151987"]},{"id":"https://openalex.org/I52158045","display_name":"China Agricultural University","ror":"https://ror.org/04v3ywz14","country_code":"CN","type":"education","lineage":["https://openalex.org/I52158045"]}],"countries":["CN"],"is_corresponding":false,"raw_author_name":"Congjiao Sun","raw_affiliation_strings":["Department of Animal Genetics and Breeding, College of Animal Science and Technology, China Agricultural University , Beijing, 100193, China","National Engineering Laboratory for Animal Breeding and Key Laboratory of Animal Genetics, Breeding and Reproduction, Ministry of Agriculture and Rural Affairs, China Agricultural University , Beijing 100193, China","Sanya Institute of China Agricultural University , Hainan 572025, China","State Key Laboratory of Animal Biotech Breeding and Frontier Science Center for Molecular Design Breeding, China Agricultural University , Beijing 100193, China"],"raw_orcid":null,"affiliations":[{"raw_affiliation_string":"Department of Animal Genetics and Breeding, College of Animal Science and Technology, China Agricultural University , Beijing, 100193, China","institution_ids":["https://openalex.org/I52158045"]},{"raw_affiliation_string":"National Engineering Laboratory for Animal Breeding and Key Laboratory of Animal Genetics, Breeding and Reproduction, Ministry of Agriculture and Rural Affairs, China Agricultural University , Beijing 100193, China","institution_ids":["https://openalex.org/I4210151987","https://openalex.org/I52158045"]},{"raw_affiliation_string":"Sanya Institute of China Agricultural University , Hainan 572025, China","institution_ids":["https://openalex.org/I4210149102","https://openalex.org/I52158045"]},{"raw_affiliation_string":"State Key Laboratory of Animal Biotech Breeding and Frontier Science Center for Molecular Design Breeding, China Agricultural University , Beijing 100193, China","institution_ids":["https://openalex.org/I52158045"]}]},{"author_position":"last","author":{"id":"https://openalex.org/A5074516400","display_name":"Ning Yang","orcid":"https://orcid.org/0000-0001-5772-3320"},"institutions":[{"id":"https://openalex.org/I4210149102","display_name":"Sanya University","ror":"https://ror.org/04fa2qd52","country_code":"CN","type":"education","lineage":["https://openalex.org/I4210149102"]},{"id":"https://openalex.org/I4210151987","display_name":"Ministry of Agriculture and Rural Affairs","ror":"https://ror.org/05ckt8b96","country_code":"CN","type":"government","lineage":["https://openalex.org/I4210127390","https://openalex.org/I4210151987"]},{"id":"https://openalex.org/I52158045","display_name":"China Agricultural University","ror":"https://ror.org/04v3ywz14","country_code":"CN","type":"education","lineage":["https://openalex.org/I52158045"]}],"countries":["CN"],"is_corresponding":true,"raw_author_name":"Ning Yang","raw_affiliation_strings":["Department of Animal Genetics and Breeding, College of Animal Science and Technology, China Agricultural University , Beijing, 100193, China","National Engineering Laboratory for Animal Breeding and Key Laboratory of Animal Genetics, Breeding and Reproduction, Ministry of Agriculture and Rural Affairs, China Agricultural University , Beijing 100193, China","Sanya Institute of China Agricultural University , Hainan 572025, China","State Key Laboratory of Animal Biotech Breeding and Frontier Science Center for Molecular Design Breeding, China Agricultural University , Beijing 100193, China"],"raw_orcid":"https://orcid.org/0000-0001-5772-3320","affiliations":[{"raw_affiliation_string":"Department of Animal Genetics and Breeding, College of Animal Science and Technology, China Agricultural University , Beijing, 100193, China","institution_ids":["https://openalex.org/I52158045"]},{"raw_affiliation_string":"National Engineering Laboratory for Animal Breeding and Key Laboratory of Animal Genetics, Breeding and Reproduction, Ministry of Agriculture and Rural Affairs, China Agricultural University , Beijing 100193, China","institution_ids":["https://openalex.org/I4210151987","https://openalex.org/I52158045"]},{"raw_affiliation_string":"Sanya Institute of China Agricultural University , Hainan 572025, China","institution_ids":["https://openalex.org/I4210149102","https://openalex.org/I52158045"]},{"raw_affiliation_string":"State Key Laboratory of Animal Biotech Breeding and Frontier Science Center for Molecular Design Breeding, China Agricultural University , Beijing 100193, China","institution_ids":["https://openalex.org/I52158045"]}]}],"institutions":[],"countries_distinct_count":1,"institutions_distinct_count":10,"corresponding_author_ids":["https://openalex.org/A5074516400"],"corresponding_institution_ids":["https://openalex.org/I4210149102","https://openalex.org/I4210151987","https://openalex.org/I52158045"],"apc_list":{"value":4011,"currency":"USD","value_usd":4011},"apc_paid":{"value":4011,"currency":"USD","value_usd":4011},"fwci":3.3142,"has_fulltext":true,"cited_by_count":12,"citation_normalized_percentile":{"value":0.92498284,"is_in_top_1_percent":false,"is_in_top_10_percent":true},"cited_by_percentile_year":{"min":97,"max":99},"biblio":{"volume":"25","issue":"2","first_page":null,"last_page":null},"is_retracted":false,"is_paratext":false,"is_xpac":false,"primary_topic":{"id":"https://openalex.org/T11970","display_name":"Molecular Biology Techniques and Applications","score":0.9907000064849854,"subfield":{"id":"https://openalex.org/subfields/1312","display_name":"Molecular Biology"},"field":{"id":"https://openalex.org/fields/13","display_name":"Biochemistry, Genetics and Molecular Biology"},"domain":{"id":"https://openalex.org/domains/1","display_name":"Life Sciences"}},"topics":[{"id":"https://openalex.org/T11970","display_name":"Molecular Biology Techniques and Applications","score":0.9907000064849854,"subfield":{"id":"https://openalex.org/subfields/1312","display_name":"Molecular Biology"},"field":{"id":"https://openalex.org/fields/13","display_name":"Biochemistry, Genetics and Molecular Biology"},"domain":{"id":"https://openalex.org/domains/1","display_name":"Life Sciences"}},{"id":"https://openalex.org/T12859","display_name":"Cell Image Analysis Techniques","score":0.9861000180244446,"subfield":{"id":"https://openalex.org/subfields/1304","display_name":"Biophysics"},"field":{"id":"https://openalex.org/fields/13","display_name":"Biochemistry, Genetics and Molecular Biology"},"domain":{"id":"https://openalex.org/domains/1","display_name":"Life Sciences"}},{"id":"https://openalex.org/T12874","display_name":"Digital Imaging for Blood Diseases","score":0.9438999891281128,"subfield":{"id":"https://openalex.org/subfields/1707","display_name":"Computer Vision and Pattern Recognition"},"field":{"id":"https://openalex.org/fields/17","display_name":"Computer Science"},"domain":{"id":"https://openalex.org/domains/3","display_name":"Physical Sciences"}}],"keywords":[{"id":"https://openalex.org/keywords/computer-science","display_name":"Computer science","score":0.8233369588851929},{"id":"https://openalex.org/keywords/convolutional-neural-network","display_name":"Convolutional neural network","score":0.7237672805786133},{"id":"https://openalex.org/keywords/segmentation","display_name":"Segmentation","score":0.665233850479126},{"id":"https://openalex.org/keywords/deep-learning","display_name":"Deep learning","score":0.5970970392227173},{"id":"https://openalex.org/keywords/artificial-intelligence","display_name":"Artificial intelligence","score":0.5707451701164246},{"id":"https://openalex.org/keywords/software","display_name":"Software","score":0.5066974759101868},{"id":"https://openalex.org/keywords/pyramid","display_name":"Pyramid (geometry)","score":0.48823001980781555},{"id":"https://openalex.org/keywords/feature","display_name":"Feature (linguistics)","score":0.4776112735271454},{"id":"https://openalex.org/keywords/pattern-recognition","display_name":"Pattern recognition (psychology)","score":0.476061075925827},{"id":"https://openalex.org/keywords/muscle-fibre","display_name":"Muscle fibre","score":0.4386400580406189},{"id":"https://openalex.org/keywords/skeletal-muscle","display_name":"Skeletal muscle","score":0.35866475105285645},{"id":"https://openalex.org/keywords/machine-learning","display_name":"Machine learning","score":0.33946871757507324},{"id":"https://openalex.org/keywords/anatomy","display_name":"Anatomy","score":0.09947550296783447},{"id":"https://openalex.org/keywords/biology","display_name":"Biology","score":0.07297345995903015}],"concepts":[{"id":"https://openalex.org/C41008148","wikidata":"https://www.wikidata.org/wiki/Q21198","display_name":"Computer science","level":0,"score":0.8233369588851929},{"id":"https://openalex.org/C81363708","wikidata":"https://www.wikidata.org/wiki/Q17084460","display_name":"Convolutional neural network","level":2,"score":0.7237672805786133},{"id":"https://openalex.org/C89600930","wikidata":"https://www.wikidata.org/wiki/Q1423946","display_name":"Segmentation","level":2,"score":0.665233850479126},{"id":"https://openalex.org/C108583219","wikidata":"https://www.wikidata.org/wiki/Q197536","display_name":"Deep learning","level":2,"score":0.5970970392227173},{"id":"https://openalex.org/C154945302","wikidata":"https://www.wikidata.org/wiki/Q11660","display_name":"Artificial intelligence","level":1,"score":0.5707451701164246},{"id":"https://openalex.org/C2777904410","wikidata":"https://www.wikidata.org/wiki/Q7397","display_name":"Software","level":2,"score":0.5066974759101868},{"id":"https://openalex.org/C142575187","wikidata":"https://www.wikidata.org/wiki/Q3358290","display_name":"Pyramid (geometry)","level":2,"score":0.48823001980781555},{"id":"https://openalex.org/C2776401178","wikidata":"https://www.wikidata.org/wiki/Q12050496","display_name":"Feature (linguistics)","level":2,"score":0.4776112735271454},{"id":"https://openalex.org/C153180895","wikidata":"https://www.wikidata.org/wiki/Q7148389","display_name":"Pattern recognition (psychology)","level":2,"score":0.476061075925827},{"id":"https://openalex.org/C3017897630","wikidata":"https://www.wikidata.org/wiki/Q428914","display_name":"Muscle fibre","level":3,"score":0.4386400580406189},{"id":"https://openalex.org/C2779959927","wikidata":"https://www.wikidata.org/wiki/Q1048687","display_name":"Skeletal muscle","level":2,"score":0.35866475105285645},{"id":"https://openalex.org/C119857082","wikidata":"https://www.wikidata.org/wiki/Q2539","display_name":"Machine learning","level":1,"score":0.33946871757507324},{"id":"https://openalex.org/C105702510","wikidata":"https://www.wikidata.org/wiki/Q514","display_name":"Anatomy","level":1,"score":0.09947550296783447},{"id":"https://openalex.org/C86803240","wikidata":"https://www.wikidata.org/wiki/Q420","display_name":"Biology","level":0,"score":0.07297345995903015},{"id":"https://openalex.org/C199360897","wikidata":"https://www.wikidata.org/wiki/Q9143","display_name":"Programming language","level":1,"score":0.0},{"id":"https://openalex.org/C121332964","wikidata":"https://www.wikidata.org/wiki/Q413","display_name":"Physics","level":0,"score":0.0},{"id":"https://openalex.org/C120665830","wikidata":"https://www.wikidata.org/wiki/Q14620","display_name":"Optics","level":1,"score":0.0},{"id":"https://openalex.org/C138885662","wikidata":"https://www.wikidata.org/wiki/Q5891","display_name":"Philosophy","level":0,"score":0.0},{"id":"https://openalex.org/C41895202","wikidata":"https://www.wikidata.org/wiki/Q8162","display_name":"Linguistics","level":1,"score":0.0}],"mesh":[{"descriptor_ui":"D000077321","descriptor_name":"Deep Learning","qualifier_ui":null,"qualifier_name":null,"is_major_topic":true},{"descriptor_ui":"D000077321","descriptor_name":"Deep Learning","qualifier_ui":null,"qualifier_name":null,"is_major_topic":true},{"descriptor_ui":"D000077321","descriptor_name":"Deep Learning","qualifier_ui":null,"qualifier_name":null,"is_major_topic":true},{"descriptor_ui":"D000077321","descriptor_name":"Deep Learning","qualifier_ui":null,"qualifier_name":null,"is_major_topic":true},{"descriptor_ui":"D000465","descriptor_name":"Algorithms","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D000465","descriptor_name":"Algorithms","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D000465","descriptor_name":"Algorithms","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D000465","descriptor_name":"Algorithms","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D000818","descriptor_name":"Animals","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D000818","descriptor_name":"Animals","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D000818","descriptor_name":"Animals","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D000818","descriptor_name":"Animals","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D006801","descriptor_name":"Humans","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D006801","descriptor_name":"Humans","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D006801","descriptor_name":"Humans","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D006801","descriptor_name":"Humans","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D007091","descriptor_name":"Image Processing, Computer-Assisted","qualifier_ui":"Q000379","qualifier_name":"methods","is_major_topic":false},{"descriptor_ui":"D007091","descriptor_name":"Image Processing, Computer-Assisted","qualifier_ui":"Q000379","qualifier_name":"methods","is_major_topic":false},{"descriptor_ui":"D007091","descriptor_name":"Image Processing, Computer-Assisted","qualifier_ui":"Q000379","qualifier_name":"methods","is_major_topic":false},{"descriptor_ui":"D007091","descriptor_name":"Image Processing, Computer-Assisted","qualifier_ui":"Q000379","qualifier_name":"methods","is_major_topic":false},{"descriptor_ui":"D016571","descriptor_name":"Neural Networks, Computer","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D016571","descriptor_name":"Neural Networks, Computer","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D016571","descriptor_name":"Neural Networks, Computer","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D016571","descriptor_name":"Neural Networks, Computer","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D018485","descriptor_name":"Muscle Fibers, Skeletal","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D018485","descriptor_name":"Muscle Fibers, Skeletal","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D018485","descriptor_name":"Muscle Fibers, Skeletal","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D018485","descriptor_name":"Muscle Fibers, Skeletal","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D051379","descriptor_name":"Mice","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D051379","descriptor_name":"Mice","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D051379","descriptor_name":"Mice","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D051379","descriptor_name":"Mice","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false}],"locations_count":3,"locations":[{"id":"doi:10.1093/bib/bbad528","is_oa":true,"landing_page_url":"https://doi.org/10.1093/bib/bbad528","pdf_url":"https://academic.oup.com/bib/article-pdf/25/2/bbad528/56409882/bbad528.pdf","source":{"id":"https://openalex.org/S91767247","display_name":"Briefings in Bioinformatics","issn_l":"1467-5463","issn":["1467-5463","1477-4054"],"is_oa":true,"is_in_doaj":true,"is_core":true,"host_organization":"https://openalex.org/P4310311648","host_organization_name":"Oxford University Press","host_organization_lineage":["https://openalex.org/P4310311648","https://openalex.org/P4310311647"],"host_organization_lineage_names":["Oxford University Press","University of Oxford"],"type":"journal"},"license":"cc-by-nc","license_id":"https://openalex.org/licenses/cc-by-nc","version":"publishedVersion","is_accepted":true,"is_published":true,"raw_source_name":"Briefings in Bioinformatics","raw_type":"journal-article"},{"id":"pmid:38271484","is_oa":false,"landing_page_url":"https://pubmed.ncbi.nlm.nih.gov/38271484","pdf_url":null,"source":{"id":"https://openalex.org/S4306525036","display_name":"PubMed","issn_l":null,"issn":null,"is_oa":false,"is_in_doaj":false,"is_core":false,"host_organization":"https://openalex.org/I1299303238","host_organization_name":"National Institutes of Health","host_organization_lineage":["https://openalex.org/I1299303238"],"host_organization_lineage_names":[],"type":"repository"},"license":null,"license_id":null,"version":"publishedVersion","is_accepted":true,"is_published":true,"raw_source_name":"Briefings in bioinformatics","raw_type":null},{"id":"pmh:oai:pubmedcentral.nih.gov:10810329","is_oa":true,"landing_page_url":"https://www.ncbi.nlm.nih.gov/pmc/articles/10810329","pdf_url":"https://pmc.ncbi.nlm.nih.gov/articles/PMC10810329/pdf/bbad528.pdf","source":{"id":"https://openalex.org/S2764455111","display_name":"PubMed Central","issn_l":null,"issn":null,"is_oa":true,"is_in_doaj":false,"is_core":false,"host_organization":"https://openalex.org/I1299303238","host_organization_name":"National Institutes of Health","host_organization_lineage":["https://openalex.org/I1299303238"],"host_organization_lineage_names":[],"type":"repository"},"license":"cc-by-nc","license_id":"https://openalex.org/licenses/cc-by-nc","version":"submittedVersion","is_accepted":false,"is_published":false,"raw_source_name":"Brief Bioinform","raw_type":"Text"}],"best_oa_location":{"id":"doi:10.1093/bib/bbad528","is_oa":true,"landing_page_url":"https://doi.org/10.1093/bib/bbad528","pdf_url":"https://academic.oup.com/bib/article-pdf/25/2/bbad528/56409882/bbad528.pdf","source":{"id":"https://openalex.org/S91767247","display_name":"Briefings in Bioinformatics","issn_l":"1467-5463","issn":["1467-5463","1477-4054"],"is_oa":true,"is_in_doaj":true,"is_core":true,"host_organization":"https://openalex.org/P4310311648","host_organization_name":"Oxford University Press","host_organization_lineage":["https://openalex.org/P4310311648","https://openalex.org/P4310311647"],"host_organization_lineage_names":["Oxford University Press","University of Oxford"],"type":"journal"},"license":"cc-by-nc","license_id":"https://openalex.org/licenses/cc-by-nc","version":"publishedVersion","is_accepted":true,"is_published":true,"raw_source_name":"Briefings in Bioinformatics","raw_type":"journal-article"},"sustainable_development_goals":[{"id":"https://metadata.un.org/sdg/2","score":0.46000000834465027,"display_name":"Zero hunger"}],"awards":[{"id":"https://openalex.org/G4087107659","display_name":null,"funder_award_id":"2022YFF1000204","funder_id":"https://openalex.org/F4320335777","funder_display_name":"National Key Research and Development Program of China"},{"id":"https://openalex.org/G5172830084","display_name":null,"funder_award_id":"32102535","funder_id":"https://openalex.org/F4320321001","funder_display_name":"National Natural Science Foundation of China"}],"funders":[{"id":"https://openalex.org/F4320321001","display_name":"National Natural Science Foundation of China","ror":"https://ror.org/01h0zpd94"},{"id":"https://openalex.org/F4320321131","display_name":"China Agricultural University","ror":"https://ror.org/04v3ywz14"},{"id":"https://openalex.org/F4320335777","display_name":"National Key Research and Development Program of China","ror":null}],"has_content":{"grobid_xml":false,"pdf":true},"content_urls":{"pdf":"https://content.openalex.org/works/W4391217521.pdf"},"referenced_works_count":77,"referenced_works":["https://openalex.org/W244232182","https://openalex.org/W1940751968","https://openalex.org/W1943537065","https://openalex.org/W2015751779","https://openalex.org/W2025710021","https://openalex.org/W2073104176","https://openalex.org/W2073329923","https://openalex.org/W2081578499","https://openalex.org/W2083313236","https://openalex.org/W2100412675","https://openalex.org/W2151328705","https://openalex.org/W2166388246","https://openalex.org/W2170191823","https://openalex.org/W2171418530","https://openalex.org/W2194775991","https://openalex.org/W2210188721","https://openalex.org/W2267893954","https://openalex.org/W2290543500","https://openalex.org/W2531608338","https://openalex.org/W2556789641","https://openalex.org/W2564172360","https://openalex.org/W2754007808","https://openalex.org/W2765141291","https://openalex.org/W2782443749","https://openalex.org/W2793302862","https://openalex.org/W2806070179","https://openalex.org/W2806530968","https://openalex.org/W2811106513","https://openalex.org/W2883365705","https://openalex.org/W2885080211","https://openalex.org/W2896236975","https://openalex.org/W2899067376","https://openalex.org/W2900135733","https://openalex.org/W2900936384","https://openalex.org/W2901555807","https://openalex.org/W2910310212","https://openalex.org/W2940783928","https://openalex.org/W2952084957","https://openalex.org/W2963173614","https://openalex.org/W2964331958","https://openalex.org/W2970322015","https://openalex.org/W2972778797","https://openalex.org/W2975634117","https://openalex.org/W2981896233","https://openalex.org/W2988868890","https://openalex.org/W2989670361","https://openalex.org/W3003394053","https://openalex.org/W3006096215","https://openalex.org/W3009426980","https://openalex.org/W3015686011","https://openalex.org/W3020641185","https://openalex.org/W3042356334","https://openalex.org/W3087424167","https://openalex.org/W3093039898","https://openalex.org/W3108949561","https://openalex.org/W3111521801","https://openalex.org/W3116067510","https://openalex.org/W3126988378","https://openalex.org/W3145934288","https://openalex.org/W3156859314","https://openalex.org/W3164273455","https://openalex.org/W3164338402","https://openalex.org/W3170460219","https://openalex.org/W3175754720","https://openalex.org/W3203864625","https://openalex.org/W3209070822","https://openalex.org/W3209943878","https://openalex.org/W4200566810","https://openalex.org/W4210804371","https://openalex.org/W4211144975","https://openalex.org/W4220959350","https://openalex.org/W4221038292","https://openalex.org/W4224305957","https://openalex.org/W4225657695","https://openalex.org/W4280572082","https://openalex.org/W6767026432","https://openalex.org/W6793212118"],"related_works":["https://openalex.org/W4293226380","https://openalex.org/W4375867731","https://openalex.org/W4226493464","https://openalex.org/W4312417841","https://openalex.org/W3193565141","https://openalex.org/W3133861977","https://openalex.org/W2951211570","https://openalex.org/W3103566983","https://openalex.org/W3167935049","https://openalex.org/W3029198973"],"abstract_inverted_index":{"Accurate":[0],"approaches":[1,23],"for":[2,24,121,136,150,163,186],"quantifying":[3],"muscle":[4,28,38,83,141,151,190,213],"fibers":[5,29,39,191],"are":[6,146,158],"essential":[7],"in":[8,108],"biomedical":[9],"research":[10],"and":[11,26,32,50,64,68,89,99,114,118,133,154,180,199,211],"meat":[12,161],"production.":[13],"In":[14],"this":[15,168],"study,":[16],"we":[17,166],"address":[18],"the":[19,73,79,196],"limitations":[20],"of":[21,97,102],"existing":[22],"hematoxylin":[25],"eosin-stained":[27],"by":[30],"manually":[31],"semiautomatically":[33],"labeling":[34],"over":[35,187],"660":[36],"000":[37,189],"to":[40,81,207],"create":[41],"a":[42,65,105,131,147,159,193],"large":[43],"dataset.":[44],"Subsequently,":[45],"an":[46,203],"automated":[47],"image":[48],"segmentation":[49],"quantification":[51,215],"tool":[52,80,135,169],"named":[53],"MyoV":[54,127],"is":[55,128],"designed":[56],"using":[57],"mask":[58],"regions":[59],"with":[60,86,139,173,202],"convolutional":[61],"neural":[62],"networks":[63],"residual":[66],"network":[67,71],"feature":[69],"pyramid":[70],"as":[72,130,176],"backbone":[74],"network.":[75],"This":[76],"design":[77],"enables":[78],"allow":[82],"fiber":[84,214],"processing":[85,185],"different":[87,140],"sizes":[88],"ages.":[90],"MyoV,":[91],"which":[92,145,157],"achieves":[93],"impressive":[94],"detection":[95],"rates":[96],"0.93-0.96":[98],"precision":[100],"levels":[101],"0.91-0.97,":[103],"exhibits":[104],"superior":[106],"performance":[107],"quantification,":[109],"surpassing":[110],"both":[111],"manual":[112],"methods":[113],"commonly":[115],"employed":[116],"algorithms":[117],"software,":[119],"particularly":[120],"whole":[122],"slide":[123],"images":[124],"(WSIs).":[125],"Moreover,":[126],"proven":[129],"powerful":[132],"suitable":[134],"various":[137],"species":[138],"development,":[142],"including":[143],"mice,":[144],"crucial":[148],"model":[149,197],"disease":[152],"diagnosis,":[153],"agricultural":[155],"animals,":[156],"significant":[160],"source":[162],"humans.":[164],"Finally,":[165],"integrate":[167],"into":[170],"visualization":[171],"software":[172],"functions,":[174],"such":[175],"segmentation,":[177],"area":[178],"determination":[179],"automatic":[181],"labeling,":[182],"allowing":[183],"seamless":[184],"400":[188],"within":[192],"WSI,":[194],"eliminating":[195],"adjustment":[198],"providing":[200],"researchers":[201],"easy-to-use":[204],"visual":[205],"interface":[206],"browse":[208],"functional":[209],"options":[210],"realize":[212],"from":[216],"WSIs.":[217]},"counts_by_year":[{"year":2026,"cited_by_count":2},{"year":2025,"cited_by_count":6},{"year":2024,"cited_by_count":4}],"updated_date":"2026-06-03T09:05:47.796612","created_date":"2025-10-10T00:00:00"}
