{"id":"https://openalex.org/W4390678091","doi":"https://doi.org/10.1093/bib/bbad500","title":"stAA: adversarial graph autoencoder for spatial clustering task of spatially resolved transcriptomics","display_name":"stAA: adversarial graph autoencoder for spatial clustering task of spatially resolved transcriptomics","publication_year":2023,"publication_date":"2023-11-22","ids":{"openalex":"https://openalex.org/W4390678091","doi":"https://doi.org/10.1093/bib/bbad500","pmid":"https://pubmed.ncbi.nlm.nih.gov/38189544"},"language":"en","primary_location":{"id":"doi:10.1093/bib/bbad500","is_oa":true,"landing_page_url":"https://doi.org/10.1093/bib/bbad500","pdf_url":"https://academic.oup.com/bib/article-pdf/25/1/bbad500/55123373/bbad500.pdf","source":{"id":"https://openalex.org/S91767247","display_name":"Briefings in Bioinformatics","issn_l":"1467-5463","issn":["1467-5463","1477-4054"],"is_oa":false,"is_in_doaj":true,"is_core":true,"host_organization":"https://openalex.org/P4310311648","host_organization_name":"Oxford University Press","host_organization_lineage":["https://openalex.org/P4310311648","https://openalex.org/P4310311647"],"host_organization_lineage_names":["Oxford University Press","University of Oxford"],"type":"journal"},"license":"cc-by","license_id":"https://openalex.org/licenses/cc-by","version":"publishedVersion","is_accepted":true,"is_published":true,"raw_source_name":"Briefings in Bioinformatics","raw_type":"journal-article"},"type":"article","indexed_in":["crossref","doaj","pubmed"],"open_access":{"is_oa":true,"oa_status":"hybrid","oa_url":"https://academic.oup.com/bib/article-pdf/25/1/bbad500/55123373/bbad500.pdf","any_repository_has_fulltext":true},"authorships":[{"author_position":"first","author":{"id":"https://openalex.org/A5009458572","display_name":"Zhaoyu Fang","orcid":null},"institutions":[{"id":"https://openalex.org/I139660479","display_name":"Central South University","ror":"https://ror.org/00f1zfq44","country_code":"CN","type":"education","lineage":["https://openalex.org/I139660479"]}],"countries":["CN"],"is_corresponding":false,"raw_author_name":"Zhaoyu Fang","raw_affiliation_strings":["School of Computer Science and Engineering, Central South University , Changsha, Hunan 410083 , China"],"affiliations":[{"raw_affiliation_string":"School of Computer Science and Engineering, Central South University , Changsha, Hunan 410083 , China","institution_ids":["https://openalex.org/I139660479"]}]},{"author_position":"middle","author":{"id":"https://openalex.org/A5100416715","display_name":"Teng Liu","orcid":"https://orcid.org/0000-0001-5862-0518"},"institutions":[{"id":"https://openalex.org/I158842170","display_name":"Chongqing University","ror":"https://ror.org/023rhb549","country_code":"CN","type":"education","lineage":["https://openalex.org/I158842170"]},{"id":"https://openalex.org/I4210135470","display_name":"Chongqing Emergency Medical Center","ror":"https://ror.org/03xhwyc44","country_code":"CN","type":"healthcare","lineage":["https://openalex.org/I4210135470"]},{"id":"https://openalex.org/I50180762","display_name":"Chongqing Three Gorges University","ror":"https://ror.org/05rs3pv16","country_code":"CN","type":"education","lineage":["https://openalex.org/I50180762"]}],"countries":["CN"],"is_corresponding":false,"raw_author_name":"Teng Liu","raw_affiliation_strings":["Chongqing University , School of Medicine, , Chongqing 401331 , China","Chongqing University Three Gorges Hospital, Chongqing University , Medical Pathology Center (MPC), Cancer Early Detection and Treatment Center (CEDTC), , Chongqing 404031 , China","Clinical Research Center (CRC) , Medical Pathology Center (MPC), Cancer Early Detection and Treatment Center (CEDTC), , Chongqing 404031 , China","Translational Medicine Research Center (TMRC) , School of Medicine, , Chongqing 401331 , China","Clinical Research Center (CRC), Medical Pathology Center (MPC), Cancer Early Detection and Treatment Center (CEDTC), Chongqing University Three Gorges Hospital, Chongqing University, Chongqing 404031, China"],"affiliations":[{"raw_affiliation_string":"Chongqing University , School of Medicine, , Chongqing 401331 , China","institution_ids":["https://openalex.org/I158842170"]},{"raw_affiliation_string":"Chongqing University Three Gorges Hospital, Chongqing University , Medical Pathology Center (MPC), Cancer Early Detection and Treatment Center (CEDTC), , Chongqing 404031 , China","institution_ids":["https://openalex.org/I50180762","https://openalex.org/I158842170"]},{"raw_affiliation_string":"Clinical Research Center (CRC) , Medical Pathology Center (MPC), Cancer Early Detection and Treatment Center (CEDTC), , Chongqing 404031 , China","institution_ids":["https://openalex.org/I4210135470"]},{"raw_affiliation_string":"Translational Medicine Research Center (TMRC) , School of Medicine, , Chongqing 401331 , China","institution_ids":[]},{"raw_affiliation_string":"Clinical Research Center (CRC), Medical Pathology Center (MPC), Cancer Early Detection and Treatment Center (CEDTC), Chongqing University Three Gorges Hospital, Chongqing University, Chongqing 404031, China","institution_ids":["https://openalex.org/I50180762","https://openalex.org/I158842170"]}]},{"author_position":"middle","author":{"id":"https://openalex.org/A5044328870","display_name":"Ruiqing Zheng","orcid":"https://orcid.org/0000-0001-6372-6798"},"institutions":[{"id":"https://openalex.org/I139660479","display_name":"Central South University","ror":"https://ror.org/00f1zfq44","country_code":"CN","type":"education","lineage":["https://openalex.org/I139660479"]}],"countries":["CN"],"is_corresponding":false,"raw_author_name":"Ruiqing Zheng","raw_affiliation_strings":["School of Computer Science and Engineering, Central South University , Changsha, Hunan 410083 , China"],"affiliations":[{"raw_affiliation_string":"School of Computer Science and Engineering, Central South University , Changsha, Hunan 410083 , China","institution_ids":["https://openalex.org/I139660479"]}]},{"author_position":"middle","author":{"id":"https://openalex.org/A5101078250","display_name":"Jin A","orcid":null},"institutions":[{"id":"https://openalex.org/I139660479","display_name":"Central South University","ror":"https://ror.org/00f1zfq44","country_code":"CN","type":"education","lineage":["https://openalex.org/I139660479"]}],"countries":["CN"],"is_corresponding":false,"raw_author_name":"Jin A","raw_affiliation_strings":["School of Computer Science and Engineering, Central South University , Changsha, Hunan 410083 , China"],"affiliations":[{"raw_affiliation_string":"School of Computer Science and Engineering, Central South University , Changsha, Hunan 410083 , China","institution_ids":["https://openalex.org/I139660479"]}]},{"author_position":"middle","author":{"id":"https://openalex.org/A5021389154","display_name":"Mingzhu Yin","orcid":"https://orcid.org/0000-0002-6964-7131"},"institutions":[{"id":"https://openalex.org/I158842170","display_name":"Chongqing University","ror":"https://ror.org/023rhb549","country_code":"CN","type":"education","lineage":["https://openalex.org/I158842170"]},{"id":"https://openalex.org/I4210135470","display_name":"Chongqing Emergency Medical Center","ror":"https://ror.org/03xhwyc44","country_code":"CN","type":"healthcare","lineage":["https://openalex.org/I4210135470"]},{"id":"https://openalex.org/I50180762","display_name":"Chongqing Three Gorges University","ror":"https://ror.org/05rs3pv16","country_code":"CN","type":"education","lineage":["https://openalex.org/I50180762"]}],"countries":["CN"],"is_corresponding":true,"raw_author_name":"Mingzhu Yin","raw_affiliation_strings":["Chongqing University , School of Medicine, , Chongqing 401331 , China","Chongqing University Three Gorges Hospital, Chongqing University , Medical Pathology Center (MPC), Cancer Early Detection and Treatment Center (CEDTC), , Chongqing 404031 , China","Clinical Research Center (CRC) , Medical Pathology Center (MPC), Cancer Early Detection and Treatment Center (CEDTC), , Chongqing 404031 , China","Translational Medicine Research Center (TMRC) , School of Medicine, , Chongqing 401331 , China","Clinical Research Center (CRC), Medical Pathology Center (MPC), Cancer Early Detection and Treatment Center (CEDTC), Chongqing University Three Gorges Hospital, Chongqing University, Chongqing 404031, China"],"affiliations":[{"raw_affiliation_string":"Chongqing University , School of Medicine, , Chongqing 401331 , China","institution_ids":["https://openalex.org/I158842170"]},{"raw_affiliation_string":"Chongqing University Three Gorges Hospital, Chongqing University , Medical Pathology Center (MPC), Cancer Early Detection and Treatment Center (CEDTC), , Chongqing 404031 , China","institution_ids":["https://openalex.org/I50180762","https://openalex.org/I158842170"]},{"raw_affiliation_string":"Clinical Research Center (CRC) , Medical Pathology Center (MPC), Cancer Early Detection and Treatment Center (CEDTC), , Chongqing 404031 , China","institution_ids":["https://openalex.org/I4210135470"]},{"raw_affiliation_string":"Translational Medicine Research Center (TMRC) , School of Medicine, , Chongqing 401331 , China","institution_ids":[]},{"raw_affiliation_string":"Clinical Research Center (CRC), Medical Pathology Center (MPC), Cancer Early Detection and Treatment Center (CEDTC), Chongqing University Three Gorges Hospital, Chongqing University, Chongqing 404031, China","institution_ids":["https://openalex.org/I50180762","https://openalex.org/I158842170"]}]},{"author_position":"last","author":{"id":"https://openalex.org/A5100719013","display_name":"Min Li","orcid":"https://orcid.org/0000-0002-0188-1394"},"institutions":[{"id":"https://openalex.org/I139660479","display_name":"Central South University","ror":"https://ror.org/00f1zfq44","country_code":"CN","type":"education","lineage":["https://openalex.org/I139660479"]}],"countries":["CN"],"is_corresponding":true,"raw_author_name":"Min Li","raw_affiliation_strings":["School of Computer Science and Engineering, Central South University , Changsha, Hunan 410083 , China"],"affiliations":[{"raw_affiliation_string":"School of Computer Science and Engineering, Central South University , Changsha, Hunan 410083 , China","institution_ids":["https://openalex.org/I139660479"]}]}],"institutions":[],"countries_distinct_count":1,"institutions_distinct_count":6,"corresponding_author_ids":["https://openalex.org/A5021389154","https://openalex.org/A5100719013"],"corresponding_institution_ids":["https://openalex.org/I139660479","https://openalex.org/I158842170","https://openalex.org/I4210135470","https://openalex.org/I50180762"],"apc_list":{"value":4011,"currency":"USD","value_usd":4011},"apc_paid":{"value":4011,"currency":"USD","value_usd":4011},"fwci":2.4306,"has_fulltext":true,"cited_by_count":16,"citation_normalized_percentile":{"value":0.89394444,"is_in_top_1_percent":false,"is_in_top_10_percent":false},"cited_by_percentile_year":{"min":98,"max":99},"biblio":{"volume":"25","issue":"1","first_page":null,"last_page":null},"is_retracted":false,"is_paratext":false,"is_xpac":false,"primary_topic":{"id":"https://openalex.org/T11289","display_name":"Single-cell and spatial transcriptomics","score":1.0,"subfield":{"id":"https://openalex.org/subfields/1312","display_name":"Molecular Biology"},"field":{"id":"https://openalex.org/fields/13","display_name":"Biochemistry, Genetics and Molecular Biology"},"domain":{"id":"https://openalex.org/domains/1","display_name":"Life Sciences"}},"topics":[{"id":"https://openalex.org/T11289","display_name":"Single-cell and spatial transcriptomics","score":1.0,"subfield":{"id":"https://openalex.org/subfields/1312","display_name":"Molecular Biology"},"field":{"id":"https://openalex.org/fields/13","display_name":"Biochemistry, Genetics and Molecular Biology"},"domain":{"id":"https://openalex.org/domains/1","display_name":"Life Sciences"}},{"id":"https://openalex.org/T10885","display_name":"Gene expression and cancer classification","score":0.9398999810218811,"subfield":{"id":"https://openalex.org/subfields/1312","display_name":"Molecular Biology"},"field":{"id":"https://openalex.org/fields/13","display_name":"Biochemistry, Genetics and Molecular Biology"},"domain":{"id":"https://openalex.org/domains/1","display_name":"Life Sciences"}},{"id":"https://openalex.org/T13410","display_name":"Immune responses and vaccinations","score":0.9287999868392944,"subfield":{"id":"https://openalex.org/subfields/2403","display_name":"Immunology"},"field":{"id":"https://openalex.org/fields/24","display_name":"Immunology and Microbiology"},"domain":{"id":"https://openalex.org/domains/1","display_name":"Life Sciences"}}],"keywords":[{"id":"https://openalex.org/keywords/cluster-analysis","display_name":"Cluster analysis","score":0.7212064266204834},{"id":"https://openalex.org/keywords/autoencoder","display_name":"Autoencoder","score":0.6435275077819824},{"id":"https://openalex.org/keywords/computer-science","display_name":"Computer science","score":0.6043621897697449},{"id":"https://openalex.org/keywords/pattern-recognition","display_name":"Pattern recognition (psychology)","score":0.5445019602775574},{"id":"https://openalex.org/keywords/graph","display_name":"Graph","score":0.5401706695556641},{"id":"https://openalex.org/keywords/artificial-intelligence","display_name":"Artificial intelligence","score":0.5005605220794678},{"id":"https://openalex.org/keywords/graph-embedding","display_name":"Graph embedding","score":0.4808014929294586},{"id":"https://openalex.org/keywords/spatial-analysis","display_name":"Spatial analysis","score":0.47059834003448486},{"id":"https://openalex.org/keywords/embedding","display_name":"Embedding","score":0.46953094005584717},{"id":"https://openalex.org/keywords/artificial-neural-network","display_name":"Artificial neural network","score":0.3471183776855469},{"id":"https://openalex.org/keywords/data-mining","display_name":"Data mining","score":0.34612053632736206},{"id":"https://openalex.org/keywords/mathematics","display_name":"Mathematics","score":0.24183562397956848},{"id":"https://openalex.org/keywords/theoretical-computer-science","display_name":"Theoretical computer science","score":0.1928354799747467}],"concepts":[{"id":"https://openalex.org/C73555534","wikidata":"https://www.wikidata.org/wiki/Q622825","display_name":"Cluster analysis","level":2,"score":0.7212064266204834},{"id":"https://openalex.org/C101738243","wikidata":"https://www.wikidata.org/wiki/Q786435","display_name":"Autoencoder","level":3,"score":0.6435275077819824},{"id":"https://openalex.org/C41008148","wikidata":"https://www.wikidata.org/wiki/Q21198","display_name":"Computer science","level":0,"score":0.6043621897697449},{"id":"https://openalex.org/C153180895","wikidata":"https://www.wikidata.org/wiki/Q7148389","display_name":"Pattern recognition (psychology)","level":2,"score":0.5445019602775574},{"id":"https://openalex.org/C132525143","wikidata":"https://www.wikidata.org/wiki/Q141488","display_name":"Graph","level":2,"score":0.5401706695556641},{"id":"https://openalex.org/C154945302","wikidata":"https://www.wikidata.org/wiki/Q11660","display_name":"Artificial intelligence","level":1,"score":0.5005605220794678},{"id":"https://openalex.org/C75564084","wikidata":"https://www.wikidata.org/wiki/Q5597085","display_name":"Graph embedding","level":3,"score":0.4808014929294586},{"id":"https://openalex.org/C159620131","wikidata":"https://www.wikidata.org/wiki/Q1938983","display_name":"Spatial analysis","level":2,"score":0.47059834003448486},{"id":"https://openalex.org/C41608201","wikidata":"https://www.wikidata.org/wiki/Q980509","display_name":"Embedding","level":2,"score":0.46953094005584717},{"id":"https://openalex.org/C50644808","wikidata":"https://www.wikidata.org/wiki/Q192776","display_name":"Artificial neural network","level":2,"score":0.3471183776855469},{"id":"https://openalex.org/C124101348","wikidata":"https://www.wikidata.org/wiki/Q172491","display_name":"Data mining","level":1,"score":0.34612053632736206},{"id":"https://openalex.org/C33923547","wikidata":"https://www.wikidata.org/wiki/Q395","display_name":"Mathematics","level":0,"score":0.24183562397956848},{"id":"https://openalex.org/C80444323","wikidata":"https://www.wikidata.org/wiki/Q2878974","display_name":"Theoretical computer science","level":1,"score":0.1928354799747467},{"id":"https://openalex.org/C105795698","wikidata":"https://www.wikidata.org/wiki/Q12483","display_name":"Statistics","level":1,"score":0.0}],"mesh":[{"descriptor_ui":"D016000","descriptor_name":"Cluster Analysis","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D016000","descriptor_name":"Cluster Analysis","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D016000","descriptor_name":"Cluster Analysis","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D016000","descriptor_name":"Cluster Analysis","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D016000","descriptor_name":"Cluster Analysis","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D016000","descriptor_name":"Cluster Analysis","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D016571","descriptor_name":"Neural Networks, Computer","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D016571","descriptor_name":"Neural Networks, Computer","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D016571","descriptor_name":"Neural Networks, Computer","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D016571","descriptor_name":"Neural Networks, Computer","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D016571","descriptor_name":"Neural Networks, Computer","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D016571","descriptor_name":"Neural Networks, Computer","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D020869","descriptor_name":"Gene Expression Profiling","qualifier_ui":null,"qualifier_name":null,"is_major_topic":true},{"descriptor_ui":"D020869","descriptor_name":"Gene Expression Profiling","qualifier_ui":null,"qualifier_name":null,"is_major_topic":true},{"descriptor_ui":"D020869","descriptor_name":"Gene Expression Profiling","qualifier_ui":null,"qualifier_name":null,"is_major_topic":true},{"descriptor_ui":"D020869","descriptor_name":"Gene Expression Profiling","qualifier_ui":null,"qualifier_name":null,"is_major_topic":true},{"descriptor_ui":"D020869","descriptor_name":"Gene Expression Profiling","qualifier_ui":null,"qualifier_name":null,"is_major_topic":true},{"descriptor_ui":"D020869","descriptor_name":"Gene Expression Profiling","qualifier_ui":null,"qualifier_name":null,"is_major_topic":true},{"descriptor_ui":"D059467","descriptor_name":"Transcriptome","qualifier_ui":null,"qualifier_name":null,"is_major_topic":true},{"descriptor_ui":"D059467","descriptor_name":"Transcriptome","qualifier_ui":null,"qualifier_name":null,"is_major_topic":true},{"descriptor_ui":"D059467","descriptor_name":"Transcriptome","qualifier_ui":null,"qualifier_name":null,"is_major_topic":true},{"descriptor_ui":"D059467","descriptor_name":"Transcriptome","qualifier_ui":null,"qualifier_name":null,"is_major_topic":true},{"descriptor_ui":"D059467","descriptor_name":"Transcriptome","qualifier_ui":null,"qualifier_name":null,"is_major_topic":true},{"descriptor_ui":"D059467","descriptor_name":"Transcriptome","qualifier_ui":null,"qualifier_name":null,"is_major_topic":true}],"locations_count":3,"locations":[{"id":"doi:10.1093/bib/bbad500","is_oa":true,"landing_page_url":"https://doi.org/10.1093/bib/bbad500","pdf_url":"https://academic.oup.com/bib/article-pdf/25/1/bbad500/55123373/bbad500.pdf","source":{"id":"https://openalex.org/S91767247","display_name":"Briefings in Bioinformatics","issn_l":"1467-5463","issn":["1467-5463","1477-4054"],"is_oa":false,"is_in_doaj":true,"is_core":true,"host_organization":"https://openalex.org/P4310311648","host_organization_name":"Oxford University Press","host_organization_lineage":["https://openalex.org/P4310311648","https://openalex.org/P4310311647"],"host_organization_lineage_names":["Oxford University Press","University of Oxford"],"type":"journal"},"license":"cc-by","license_id":"https://openalex.org/licenses/cc-by","version":"publishedVersion","is_accepted":true,"is_published":true,"raw_source_name":"Briefings in Bioinformatics","raw_type":"journal-article"},{"id":"pmid:38189544","is_oa":false,"landing_page_url":"https://pubmed.ncbi.nlm.nih.gov/38189544","pdf_url":null,"source":{"id":"https://openalex.org/S4306525036","display_name":"PubMed","issn_l":null,"issn":null,"is_oa":false,"is_in_doaj":false,"is_core":false,"host_organization":"https://openalex.org/I1299303238","host_organization_name":"National Institutes of Health","host_organization_lineage":["https://openalex.org/I1299303238"],"host_organization_lineage_names":[],"type":"repository"},"license":null,"license_id":null,"version":"publishedVersion","is_accepted":true,"is_published":true,"raw_source_name":"Briefings in bioinformatics","raw_type":null},{"id":"pmh:oai:pubmedcentral.nih.gov:10772985","is_oa":true,"landing_page_url":"https://www.ncbi.nlm.nih.gov/pmc/articles/10772985","pdf_url":"https://pmc.ncbi.nlm.nih.gov/articles/PMC10772985/pdf/bbad500.pdf","source":{"id":"https://openalex.org/S2764455111","display_name":"PubMed Central","issn_l":null,"issn":null,"is_oa":false,"is_in_doaj":false,"is_core":false,"host_organization":"https://openalex.org/I1299303238","host_organization_name":"National Institutes of Health","host_organization_lineage":["https://openalex.org/I1299303238"],"host_organization_lineage_names":[],"type":"repository"},"license":"cc-by","license_id":"https://openalex.org/licenses/cc-by","version":"submittedVersion","is_accepted":false,"is_published":false,"raw_source_name":"Brief Bioinform","raw_type":"Text"}],"best_oa_location":{"id":"doi:10.1093/bib/bbad500","is_oa":true,"landing_page_url":"https://doi.org/10.1093/bib/bbad500","pdf_url":"https://academic.oup.com/bib/article-pdf/25/1/bbad500/55123373/bbad500.pdf","source":{"id":"https://openalex.org/S91767247","display_name":"Briefings in Bioinformatics","issn_l":"1467-5463","issn":["1467-5463","1477-4054"],"is_oa":false,"is_in_doaj":true,"is_core":true,"host_organization":"https://openalex.org/P4310311648","host_organization_name":"Oxford University Press","host_organization_lineage":["https://openalex.org/P4310311648","https://openalex.org/P4310311647"],"host_organization_lineage_names":["Oxford University Press","University of Oxford"],"type":"journal"},"license":"cc-by","license_id":"https://openalex.org/licenses/cc-by","version":"publishedVersion","is_accepted":true,"is_published":true,"raw_source_name":"Briefings in Bioinformatics","raw_type":"journal-article"},"sustainable_development_goals":[],"awards":[{"id":"https://openalex.org/G1121271761","display_name":null,"funder_award_id":"Program","funder_id":"https://openalex.org/F4320321001","funder_display_name":"National Natural Science Foundation of China"},{"id":"https://openalex.org/G1231421488","display_name":null,"funder_award_id":"under","funder_id":"https://openalex.org/F4320321001","funder_display_name":"National Natural Science Foundation of China"},{"id":"https://openalex.org/G1279067677","display_name":null,"funder_award_id":"CX20220276","funder_id":"https://openalex.org/F4320335880","funder_display_name":"Fundamental Research Funds for Central Universities of the Central South University"},{"id":"https://openalex.org/G2087396116","display_name":null,"funder_award_id":"China","funder_id":"https://openalex.org/F4320321001","funder_display_name":"National Natural Science Foundation of China"},{"id":"https://openalex.org/G2305853830","display_name":null,"funder_award_id":"62320106009","funder_id":"https://openalex.org/F4320321001","funder_display_name":"National Natural Science Foundation of China"},{"id":"https://openalex.org/G2376276132","display_name":null,"funder_award_id":"China","funder_id":"https://openalex.org/F4320335787","funder_display_name":"Fundamental Research Funds for the Central Universities"},{"id":"https://openalex.org/G3013529484","display_name":null,"funder_award_id":"2022027","funder_id":"https://openalex.org/F4320335787","funder_display_name":"Fundamental Research Funds for the Central Universities"},{"id":"https://openalex.org/G3317480652","display_name":null,"funder_award_id":"Science","funder_id":"https://openalex.org/F4320321001","funder_display_name":"National Natural Science Foundation of China"},{"id":"https://openalex.org/G5939423041","display_name":null,"funder_award_id":"Technology","funder_id":"https://openalex.org/F4320321001","funder_display_name":"National Natural Science Foundation of China"},{"id":"https://openalex.org/G5994120800","display_name":null,"funder_award_id":"Natural","funder_id":"https://openalex.org/F4320321001","funder_display_name":"National Natural Science Foundation of China"},{"id":"https://openalex.org/G7033253288","display_name":null,"funder_award_id":"Grants","funder_id":"https://openalex.org/F4320321001","funder_display_name":"National Natural Science Foundation of China"},{"id":"https://openalex.org/G8663586063","display_name":null,"funder_award_id":"62225209","funder_id":"https://openalex.org/F4320321001","funder_display_name":"National Natural Science Foundation of China"},{"id":"https://openalex.org/G8863666567","display_name":null,"funder_award_id":"and No.","funder_id":"https://openalex.org/F4320321001","funder_display_name":"National Natural Science Foundation of China"},{"id":"https://openalex.org/G8951484681","display_name":null,"funder_award_id":"Grant","funder_id":"https://openalex.org/F4320335787","funder_display_name":"Fundamental Research Funds for the Central Universities"}],"funders":[{"id":"https://openalex.org/F4320321001","display_name":"National Natural Science Foundation of China","ror":"https://ror.org/01h0zpd94"},{"id":"https://openalex.org/F4320321514","display_name":"Central South University","ror":"https://ror.org/00f1zfq44"},{"id":"https://openalex.org/F4320335787","display_name":"Fundamental Research Funds for the Central Universities","ror":null},{"id":"https://openalex.org/F4320335880","display_name":"Fundamental Research Funds for Central Universities of the Central South University","ror":null}],"has_content":{"pdf":true,"grobid_xml":false},"content_urls":{"pdf":"https://content.openalex.org/works/W4390678091.pdf"},"referenced_works_count":61,"referenced_works":["https://openalex.org/W1974565082","https://openalex.org/W2069089843","https://openalex.org/W2115663787","https://openalex.org/W2130410032","https://openalex.org/W2131681506","https://openalex.org/W2253089030","https://openalex.org/W2344649716","https://openalex.org/W2519132385","https://openalex.org/W2800392236","https://openalex.org/W2809368942","https://openalex.org/W2911883556","https://openalex.org/W2915848182","https://openalex.org/W2923300855","https://openalex.org/W2950372712","https://openalex.org/W2962904108","https://openalex.org/W2963746531","https://openalex.org/W2982599496","https://openalex.org/W2985746287","https://openalex.org/W3004640473","https://openalex.org/W3032266082","https://openalex.org/W3033654468","https://openalex.org/W3048017942","https://openalex.org/W3099768174","https://openalex.org/W3108118546","https://openalex.org/W3112563877","https://openalex.org/W3132661792","https://openalex.org/W3134210100","https://openalex.org/W3134482219","https://openalex.org/W3165120573","https://openalex.org/W3175752499","https://openalex.org/W3183196353","https://openalex.org/W3200650376","https://openalex.org/W3208432399","https://openalex.org/W3214865687","https://openalex.org/W4206826076","https://openalex.org/W4210583065","https://openalex.org/W4225272983","https://openalex.org/W4226192560","https://openalex.org/W4229033508","https://openalex.org/W4233721145","https://openalex.org/W4235169531","https://openalex.org/W4242111955","https://openalex.org/W4281716652","https://openalex.org/W4290154117","https://openalex.org/W4294042823","https://openalex.org/W4306406844","https://openalex.org/W4307348803","https://openalex.org/W4309667063","https://openalex.org/W4309944312","https://openalex.org/W4322614756","https://openalex.org/W4322738920","https://openalex.org/W4385782665","https://openalex.org/W4389938094","https://openalex.org/W4390814844","https://openalex.org/W6730084236","https://openalex.org/W6745535286","https://openalex.org/W6746327351","https://openalex.org/W6792108999","https://openalex.org/W6797786779","https://openalex.org/W6803043471","https://openalex.org/W6845992412"],"related_works":["https://openalex.org/W3036264823","https://openalex.org/W3206528106","https://openalex.org/W2123605750","https://openalex.org/W2912814903","https://openalex.org/W2088740331","https://openalex.org/W2950907416","https://openalex.org/W3038102983","https://openalex.org/W2082479932","https://openalex.org/W2932872266","https://openalex.org/W4281484020"],"abstract_inverted_index":{"With":[0],"the":[1,14,38,52,60,101,150],"development":[2],"of":[3,18,54,62,103],"spatially":[4],"resolved":[5],"transcriptomics":[6],"technologies,":[7],"it":[8],"is":[9],"now":[10],"possible":[11],"to":[12,80,106],"explore":[13],"gene":[15,90],"expression":[16,91],"profiles":[17],"single":[19],"cells":[20],"while":[21],"preserving":[22],"their":[23],"spatial":[24,33,55,63,82,93,123],"context.":[25],"Spatial":[26],"clustering":[27,156],"plays":[28],"a":[29,66,107],"key":[30],"role":[31],"in":[32,179],"transcriptome":[34],"data":[35],"analysis.":[36],"In":[37,69],"past":[39],"2":[40],"years,":[41],"several":[42],"graph":[43,78,96,133],"neural":[44,97],"network-based":[45],"methods":[46,152],"have":[47],"emerged,":[48],"which":[49],"significantly":[50],"improved":[51],"accuracy":[53],"clustering.":[56],"However,":[57],"accurately":[58,188],"identifying":[59],"boundaries":[61],"domains":[64],"remains":[65],"challenging":[67],"task.":[68],"this":[70],"article,":[71],"we":[72],"propose":[73],"stAA,":[74],"an":[75],"adversarial":[76,114],"variational":[77],"autoencoder,":[79],"identify":[81,176,189],"domain.":[83],"stAA":[84,130,148,174],"generates":[85],"cell":[86,104,119,136],"embedding":[87],"by":[88,141],"leveraging":[89],"and":[92,99,126,153,162,171,187],"information":[94,125,134],"using":[95,138],"networks":[98],"enforces":[100],"distribution":[102,109],"embeddings":[105,120,137],"prior":[108],"through":[110],"Wasserstein":[111],"distance.":[112],"The":[113],"training":[115],"process":[116],"can":[117,175],"make":[118],"better":[121,155],"capture":[122],"domain":[124],"more":[127],"robust.":[128],"Moreover,":[129],"incorporates":[131],"global":[132],"into":[135],"labels":[139],"generated":[140],"pre-clustering.":[142],"Our":[143],"experimental":[144],"results":[145,157],"show":[146],"that":[147,173],"outperforms":[149],"state-of-the-art":[151],"achieves":[154],"across":[158],"different":[159,182],"profiling":[160],"platforms":[161],"various":[163],"resolutions.":[164],"We":[165],"also":[166],"conducted":[167],"numerous":[168],"biological":[169],"analyses":[170],"found":[172],"fine-grained":[177],"structures":[178],"tissues,":[180],"recognize":[181],"functional":[183],"subtypes":[184],"within":[185],"tumors":[186],"developmental":[190],"trajectories.":[191]},"counts_by_year":[{"year":2026,"cited_by_count":2},{"year":2025,"cited_by_count":8},{"year":2024,"cited_by_count":6}],"updated_date":"2026-04-13T07:58:08.660418","created_date":"2025-10-10T00:00:00"}