{"id":"https://openalex.org/W4380136659","doi":"https://doi.org/10.1093/bib/bbad235","title":"Comprehensive evaluation of deep and graph learning on drug\u2013drug interactions prediction","display_name":"Comprehensive evaluation of deep and graph learning on drug\u2013drug interactions prediction","publication_year":2023,"publication_date":"2023-07-01","ids":{"openalex":"https://openalex.org/W4380136659","doi":"https://doi.org/10.1093/bib/bbad235","pmid":"https://pubmed.ncbi.nlm.nih.gov/37401373"},"language":"en","primary_location":{"id":"doi:10.1093/bib/bbad235","is_oa":true,"landing_page_url":"https://doi.org/10.1093/bib/bbad235","pdf_url":"https://academic.oup.com/bib/article-pdf/24/4/bbad235/50916980/bbad235.pdf","source":{"id":"https://openalex.org/S91767247","display_name":"Briefings in Bioinformatics","issn_l":"1467-5463","issn":["1467-5463","1477-4054"],"is_oa":false,"is_in_doaj":true,"is_core":true,"host_organization":"https://openalex.org/P4310311648","host_organization_name":"Oxford University Press","host_organization_lineage":["https://openalex.org/P4310311648","https://openalex.org/P4310311647"],"host_organization_lineage_names":["Oxford University Press","University of Oxford"],"type":"journal"},"license":null,"license_id":null,"version":"publishedVersion","is_accepted":true,"is_published":true,"raw_source_name":"Briefings in Bioinformatics","raw_type":"journal-article"},"type":"review","indexed_in":["arxiv","crossref","doaj","pubmed"],"open_access":{"is_oa":true,"oa_status":"bronze","oa_url":"https://academic.oup.com/bib/article-pdf/24/4/bbad235/50916980/bbad235.pdf","any_repository_has_fulltext":true},"authorships":[{"author_position":"first","author":{"id":"https://openalex.org/A5027410770","display_name":"Xuan Lin","orcid":"https://orcid.org/0000-0001-7216-1821"},"institutions":[{"id":"https://openalex.org/I4610292","display_name":"Xiangtan University","ror":"https://ror.org/00xsfaz62","country_code":"CN","type":"education","lineage":["https://openalex.org/I4610292"]}],"countries":["CN"],"is_corresponding":false,"raw_author_name":"Xuan Lin","raw_affiliation_strings":["College of Computer Science, Xiangtan University , Xiangtan , China"],"affiliations":[{"raw_affiliation_string":"College of Computer Science, Xiangtan University , Xiangtan , China","institution_ids":["https://openalex.org/I4610292"]}]},{"author_position":"middle","author":{"id":"https://openalex.org/A5059857556","display_name":"Lihua Dai","orcid":"https://orcid.org/0009-0004-1855-5212"},"institutions":[{"id":"https://openalex.org/I4610292","display_name":"Xiangtan University","ror":"https://ror.org/00xsfaz62","country_code":"CN","type":"education","lineage":["https://openalex.org/I4610292"]}],"countries":["CN"],"is_corresponding":false,"raw_author_name":"Lichang Dai","raw_affiliation_strings":["College of Computer Science, Xiangtan University , Xiangtan , China"],"affiliations":[{"raw_affiliation_string":"College of Computer Science, Xiangtan University , Xiangtan , China","institution_ids":["https://openalex.org/I4610292"]}]},{"author_position":"middle","author":{"id":"https://openalex.org/A5100645655","display_name":"Yafang Zhou","orcid":"https://orcid.org/0000-0002-1689-4462"},"institutions":[{"id":"https://openalex.org/I4610292","display_name":"Xiangtan University","ror":"https://ror.org/00xsfaz62","country_code":"CN","type":"education","lineage":["https://openalex.org/I4610292"]}],"countries":["CN"],"is_corresponding":false,"raw_author_name":"Yafang Zhou","raw_affiliation_strings":["College of Computer Science, Xiangtan University , Xiangtan , China"],"affiliations":[{"raw_affiliation_string":"College of Computer Science, Xiangtan University , Xiangtan , China","institution_ids":["https://openalex.org/I4610292"]}]},{"author_position":"middle","author":{"id":"https://openalex.org/A5026047510","display_name":"Zu\u2010Guo Yu","orcid":"https://orcid.org/0000-0001-5913-9646"},"institutions":[{"id":"https://openalex.org/I4610292","display_name":"Xiangtan University","ror":"https://ror.org/00xsfaz62","country_code":"CN","type":"education","lineage":["https://openalex.org/I4610292"]}],"countries":["CN"],"is_corresponding":false,"raw_author_name":"Zu-Guo Yu","raw_affiliation_strings":["Key Laboratory of Intelligent Computing and Information Processing of Ministry of Education, Xiangtan University , Xiangtan , China"],"affiliations":[{"raw_affiliation_string":"Key Laboratory of Intelligent Computing and Information Processing of Ministry of Education, Xiangtan University , Xiangtan , China","institution_ids":["https://openalex.org/I4610292"]}]},{"author_position":"middle","author":{"id":"https://openalex.org/A5100448121","display_name":"Wen Zhang","orcid":"https://orcid.org/0000-0001-5221-2628"},"institutions":[{"id":"https://openalex.org/I204823248","display_name":"Huazhong Agricultural University","ror":"https://ror.org/023b72294","country_code":"CN","type":"education","lineage":["https://openalex.org/I204823248"]}],"countries":["CN"],"is_corresponding":false,"raw_author_name":"Wen Zhang","raw_affiliation_strings":["College of Informatics, Huazhong Agricultural University , China"],"affiliations":[{"raw_affiliation_string":"College of Informatics, Huazhong Agricultural University , China","institution_ids":["https://openalex.org/I204823248"]}]},{"author_position":"middle","author":{"id":"https://openalex.org/A5000609872","display_name":"Jian\u2010Yu Shi","orcid":"https://orcid.org/0000-0002-2303-273X"},"institutions":[{"id":"https://openalex.org/I17145004","display_name":"Northwestern Polytechnical University","ror":"https://ror.org/01y0j0j86","country_code":"CN","type":"education","lineage":["https://openalex.org/I17145004"]}],"countries":["CN"],"is_corresponding":false,"raw_author_name":"Jian-Yu Shi","raw_affiliation_strings":["Northwestern Polytechnical University , Xian , China"],"affiliations":[{"raw_affiliation_string":"Northwestern Polytechnical University , Xian , China","institution_ids":["https://openalex.org/I17145004"]}]},{"author_position":"middle","author":{"id":"https://openalex.org/A5083809384","display_name":"Dongsheng Cao","orcid":"https://orcid.org/0000-0003-3604-3785"},"institutions":[{"id":"https://openalex.org/I139660479","display_name":"Central South University","ror":"https://ror.org/00f1zfq44","country_code":"CN","type":"education","lineage":["https://openalex.org/I139660479"]}],"countries":["CN"],"is_corresponding":false,"raw_author_name":"Dong-Sheng Cao","raw_affiliation_strings":["Xiangya School of Pharmaceutical Sciences, Central South University , China"],"affiliations":[{"raw_affiliation_string":"Xiangya School of Pharmaceutical Sciences, Central South University , China","institution_ids":["https://openalex.org/I139660479"]}]},{"author_position":"middle","author":{"id":"https://openalex.org/A5048730266","display_name":"Zeng Li","orcid":"https://orcid.org/0000-0002-4501-4102"},"institutions":[],"countries":[],"is_corresponding":false,"raw_author_name":"Li Zeng","raw_affiliation_strings":["AIDD department of Yuyao Biotech , Shanghai , China"],"affiliations":[{"raw_affiliation_string":"AIDD department of Yuyao Biotech , Shanghai , China","institution_ids":[]}]},{"author_position":"middle","author":{"id":"https://openalex.org/A5101527359","display_name":"Haowen Chen","orcid":"https://orcid.org/0000-0002-4777-7525"},"institutions":[{"id":"https://openalex.org/I16609230","display_name":"Hunan University","ror":"https://ror.org/05htk5m33","country_code":"CN","type":"education","lineage":["https://openalex.org/I16609230"]}],"countries":["CN"],"is_corresponding":true,"raw_author_name":"Haowen Chen","raw_affiliation_strings":["College of Computer Science and Electronic Engineering, Hunan University , 410013 Changsha , P. R. China"],"affiliations":[{"raw_affiliation_string":"College of Computer Science and Electronic Engineering, Hunan University , 410013 Changsha , P. R. China","institution_ids":["https://openalex.org/I16609230"]}]},{"author_position":"middle","author":{"id":"https://openalex.org/A5034581482","display_name":"Bosheng Song","orcid":"https://orcid.org/0000-0002-1479-5399"},"institutions":[{"id":"https://openalex.org/I16609230","display_name":"Hunan University","ror":"https://ror.org/05htk5m33","country_code":"CN","type":"education","lineage":["https://openalex.org/I16609230"]}],"countries":["CN"],"is_corresponding":true,"raw_author_name":"Bosheng Song","raw_affiliation_strings":["College of Information Science and Engineering, Hunan University , Changsha , China"],"affiliations":[{"raw_affiliation_string":"College of Information Science and Engineering, Hunan University , Changsha , China","institution_ids":["https://openalex.org/I16609230"]}]},{"author_position":"middle","author":{"id":"https://openalex.org/A5036357902","display_name":"Philip S. Yu","orcid":"https://orcid.org/0000-0002-3491-5968"},"institutions":[{"id":"https://openalex.org/I39422238","display_name":"University of Illinois Chicago","ror":"https://ror.org/02mpq6x41","country_code":"US","type":"education","lineage":["https://openalex.org/I39422238"]}],"countries":["US"],"is_corresponding":false,"raw_author_name":"Philip S Yu","raw_affiliation_strings":["University of Illinois at Chicago and also holds the Wexler Chair in Information Technology"],"affiliations":[{"raw_affiliation_string":"University of Illinois at Chicago and also holds the Wexler Chair in Information Technology","institution_ids":["https://openalex.org/I39422238"]}]},{"author_position":"last","author":{"id":"https://openalex.org/A5027286013","display_name":"Xiangxiang Zeng","orcid":"https://orcid.org/0000-0001-6201-0114"},"institutions":[{"id":"https://openalex.org/I16609230","display_name":"Hunan University","ror":"https://ror.org/05htk5m33","country_code":"CN","type":"education","lineage":["https://openalex.org/I16609230"]}],"countries":["CN"],"is_corresponding":false,"raw_author_name":"Xiangxiang Zeng","raw_affiliation_strings":["College of Information Science and Engineering, Hunan University , Changsha , China"],"affiliations":[{"raw_affiliation_string":"College of Information Science and Engineering, Hunan University , Changsha , China","institution_ids":["https://openalex.org/I16609230"]}]}],"institutions":[],"countries_distinct_count":2,"institutions_distinct_count":12,"corresponding_author_ids":["https://openalex.org/A5034581482","https://openalex.org/A5101527359"],"corresponding_institution_ids":["https://openalex.org/I16609230"],"apc_list":{"value":4011,"currency":"USD","value_usd":4011},"apc_paid":null,"fwci":16.4448,"has_fulltext":true,"cited_by_count":84,"citation_normalized_percentile":{"value":0.99409207,"is_in_top_1_percent":true,"is_in_top_10_percent":true},"cited_by_percentile_year":{"min":99,"max":100},"biblio":{"volume":"24","issue":"4","first_page":null,"last_page":null},"is_retracted":false,"is_paratext":false,"is_xpac":false,"primary_topic":{"id":"https://openalex.org/T10211","display_name":"Computational Drug Discovery Methods","score":1.0,"subfield":{"id":"https://openalex.org/subfields/1703","display_name":"Computational Theory and Mathematics"},"field":{"id":"https://openalex.org/fields/17","display_name":"Computer Science"},"domain":{"id":"https://openalex.org/domains/3","display_name":"Physical Sciences"}},"topics":[{"id":"https://openalex.org/T10211","display_name":"Computational Drug Discovery Methods","score":1.0,"subfield":{"id":"https://openalex.org/subfields/1703","display_name":"Computational Theory and Mathematics"},"field":{"id":"https://openalex.org/fields/17","display_name":"Computer Science"},"domain":{"id":"https://openalex.org/domains/3","display_name":"Physical Sciences"}},{"id":"https://openalex.org/T11948","display_name":"Machine Learning in Materials Science","score":0.9901000261306763,"subfield":{"id":"https://openalex.org/subfields/2505","display_name":"Materials Chemistry"},"field":{"id":"https://openalex.org/fields/25","display_name":"Materials Science"},"domain":{"id":"https://openalex.org/domains/3","display_name":"Physical Sciences"}},{"id":"https://openalex.org/T10887","display_name":"Bioinformatics and Genomic Networks","score":0.9713000059127808,"subfield":{"id":"https://openalex.org/subfields/1312","display_name":"Molecular Biology"},"field":{"id":"https://openalex.org/fields/13","display_name":"Biochemistry, Genetics and Molecular Biology"},"domain":{"id":"https://openalex.org/domains/1","display_name":"Life Sciences"}}],"keywords":[{"id":"https://openalex.org/keywords/computer-science","display_name":"Computer science","score":0.7911334037780762},{"id":"https://openalex.org/keywords/deep-learning","display_name":"Deep learning","score":0.7039061784744263},{"id":"https://openalex.org/keywords/artificial-intelligence","display_name":"Artificial intelligence","score":0.6553816795349121},{"id":"https://openalex.org/keywords/machine-learning","display_name":"Machine learning","score":0.560683012008667},{"id":"https://openalex.org/keywords/graph","display_name":"Graph","score":0.5464188456535339},{"id":"https://openalex.org/keywords/drug-discovery","display_name":"Drug discovery","score":0.45111823081970215},{"id":"https://openalex.org/keywords/artificial-neural-network","display_name":"Artificial neural network","score":0.41938018798828125},{"id":"https://openalex.org/keywords/data-science","display_name":"Data science","score":0.3972488343715668},{"id":"https://openalex.org/keywords/bioinformatics","display_name":"Bioinformatics","score":0.1657421886920929},{"id":"https://openalex.org/keywords/theoretical-computer-science","display_name":"Theoretical computer science","score":0.14801928400993347}],"concepts":[{"id":"https://openalex.org/C41008148","wikidata":"https://www.wikidata.org/wiki/Q21198","display_name":"Computer science","level":0,"score":0.7911334037780762},{"id":"https://openalex.org/C108583219","wikidata":"https://www.wikidata.org/wiki/Q197536","display_name":"Deep learning","level":2,"score":0.7039061784744263},{"id":"https://openalex.org/C154945302","wikidata":"https://www.wikidata.org/wiki/Q11660","display_name":"Artificial intelligence","level":1,"score":0.6553816795349121},{"id":"https://openalex.org/C119857082","wikidata":"https://www.wikidata.org/wiki/Q2539","display_name":"Machine learning","level":1,"score":0.560683012008667},{"id":"https://openalex.org/C132525143","wikidata":"https://www.wikidata.org/wiki/Q141488","display_name":"Graph","level":2,"score":0.5464188456535339},{"id":"https://openalex.org/C74187038","wikidata":"https://www.wikidata.org/wiki/Q1418791","display_name":"Drug discovery","level":2,"score":0.45111823081970215},{"id":"https://openalex.org/C50644808","wikidata":"https://www.wikidata.org/wiki/Q192776","display_name":"Artificial neural network","level":2,"score":0.41938018798828125},{"id":"https://openalex.org/C2522767166","wikidata":"https://www.wikidata.org/wiki/Q2374463","display_name":"Data science","level":1,"score":0.3972488343715668},{"id":"https://openalex.org/C60644358","wikidata":"https://www.wikidata.org/wiki/Q128570","display_name":"Bioinformatics","level":1,"score":0.1657421886920929},{"id":"https://openalex.org/C80444323","wikidata":"https://www.wikidata.org/wiki/Q2878974","display_name":"Theoretical computer science","level":1,"score":0.14801928400993347},{"id":"https://openalex.org/C86803240","wikidata":"https://www.wikidata.org/wiki/Q420","display_name":"Biology","level":0,"score":0.0}],"mesh":[{"descriptor_ui":"D001185","descriptor_name":"Artificial Intelligence","qualifier_ui":null,"qualifier_name":null,"is_major_topic":true},{"descriptor_ui":"D001185","descriptor_name":"Artificial Intelligence","qualifier_ui":null,"qualifier_name":null,"is_major_topic":true},{"descriptor_ui":"D001185","descriptor_name":"Artificial Intelligence","qualifier_ui":null,"qualifier_name":null,"is_major_topic":true},{"descriptor_ui":"D004347","descriptor_name":"Drug Interactions","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D004347","descriptor_name":"Drug Interactions","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D004347","descriptor_name":"Drug Interactions","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D006801","descriptor_name":"Humans","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D006801","descriptor_name":"Humans","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D006801","descriptor_name":"Humans","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D009323","descriptor_name":"Natural Language Processing","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D009323","descriptor_name":"Natural Language Processing","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D009323","descriptor_name":"Natural Language Processing","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D016571","descriptor_name":"Neural Networks, Computer","qualifier_ui":null,"qualifier_name":null,"is_major_topic":true},{"descriptor_ui":"D016571","descriptor_name":"Neural Networks, Computer","qualifier_ui":null,"qualifier_name":null,"is_major_topic":true},{"descriptor_ui":"D016571","descriptor_name":"Neural Networks, Computer","qualifier_ui":null,"qualifier_name":null,"is_major_topic":true},{"descriptor_ui":"D055808","descriptor_name":"Drug Discovery","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D055808","descriptor_name":"Drug Discovery","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D055808","descriptor_name":"Drug Discovery","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false}],"locations_count":3,"locations":[{"id":"doi:10.1093/bib/bbad235","is_oa":true,"landing_page_url":"https://doi.org/10.1093/bib/bbad235","pdf_url":"https://academic.oup.com/bib/article-pdf/24/4/bbad235/50916980/bbad235.pdf","source":{"id":"https://openalex.org/S91767247","display_name":"Briefings in Bioinformatics","issn_l":"1467-5463","issn":["1467-5463","1477-4054"],"is_oa":false,"is_in_doaj":true,"is_core":true,"host_organization":"https://openalex.org/P4310311648","host_organization_name":"Oxford University Press","host_organization_lineage":["https://openalex.org/P4310311648","https://openalex.org/P4310311647"],"host_organization_lineage_names":["Oxford University Press","University of Oxford"],"type":"journal"},"license":null,"license_id":null,"version":"publishedVersion","is_accepted":true,"is_published":true,"raw_source_name":"Briefings in Bioinformatics","raw_type":"journal-article"},{"id":"pmid:37401373","is_oa":false,"landing_page_url":"https://pubmed.ncbi.nlm.nih.gov/37401373","pdf_url":null,"source":{"id":"https://openalex.org/S4306525036","display_name":"PubMed","issn_l":null,"issn":null,"is_oa":false,"is_in_doaj":false,"is_core":false,"host_organization":"https://openalex.org/I1299303238","host_organization_name":"National Institutes of Health","host_organization_lineage":["https://openalex.org/I1299303238"],"host_organization_lineage_names":[],"type":"repository"},"license":null,"license_id":null,"version":"publishedVersion","is_accepted":true,"is_published":true,"raw_source_name":"Briefings in bioinformatics","raw_type":null},{"id":"pmh:oai:arXiv.org:2306.05257","is_oa":true,"landing_page_url":"http://arxiv.org/abs/2306.05257","pdf_url":"https://arxiv.org/pdf/2306.05257","source":{"id":"https://openalex.org/S4306400194","display_name":"arXiv (Cornell University)","issn_l":null,"issn":null,"is_oa":true,"is_in_doaj":false,"is_core":false,"host_organization":"https://openalex.org/I205783295","host_organization_name":"Cornell University","host_organization_lineage":["https://openalex.org/I205783295"],"host_organization_lineage_names":[],"type":"repository"},"license":"cc-by","license_id":"https://openalex.org/licenses/cc-by","version":"submittedVersion","is_accepted":false,"is_published":false,"raw_source_name":null,"raw_type":"text"}],"best_oa_location":{"id":"doi:10.1093/bib/bbad235","is_oa":true,"landing_page_url":"https://doi.org/10.1093/bib/bbad235","pdf_url":"https://academic.oup.com/bib/article-pdf/24/4/bbad235/50916980/bbad235.pdf","source":{"id":"https://openalex.org/S91767247","display_name":"Briefings in Bioinformatics","issn_l":"1467-5463","issn":["1467-5463","1477-4054"],"is_oa":false,"is_in_doaj":true,"is_core":true,"host_organization":"https://openalex.org/P4310311648","host_organization_name":"Oxford University Press","host_organization_lineage":["https://openalex.org/P4310311648","https://openalex.org/P4310311647"],"host_organization_lineage_names":["Oxford University Press","University of Oxford"],"type":"journal"},"license":null,"license_id":null,"version":"publishedVersion","is_accepted":true,"is_published":true,"raw_source_name":"Briefings in Bioinformatics","raw_type":"journal-article"},"sustainable_development_goals":[],"awards":[{"id":"https://openalex.org/G1121271761","display_name":null,"funder_award_id":"Program","funder_id":"https://openalex.org/F4320321001","funder_display_name":"National Natural Science Foundation of China"},{"id":"https://openalex.org/G1166278601","display_name":null,"funder_award_id":"U21A2042","funder_id":"https://openalex.org/F4320321001","funder_display_name":"National Natural Science Foundation of China"},{"id":"https://openalex.org/G1231421488","display_name":null,"funder_award_id":"under","funder_id":"https://openalex.org/F4320321001","funder_display_name":"National Natural Science Foundation of China"},{"id":"https://openalex.org/G1826349908","display_name":null,"funder_award_id":"2022JJ20016","funder_id":"https://openalex.org/F4320322843","funder_display_name":"Natural Science Foundation of\u00a0Hunan Province"},{"id":"https://openalex.org/G2087396116","display_name":null,"funder_award_id":"China","funder_id":"https://openalex.org/F4320321001","funder_display_name":"National Natural Science Foundation of China"},{"id":"https://openalex.org/G2142201510","display_name":"III: Small: Exploiting the Massive User Generated Utterances for Intent Mining under Scarce Annotations","funder_award_id":"1909323","funder_id":"https://openalex.org/F4320306076","funder_display_name":"National Science Foundation"},{"id":"https://openalex.org/G2543416449","display_name":null,"funder_award_id":"U21A20427","funder_id":"https://openalex.org/F4320321001","funder_display_name":"National Natural Science Foundation of China"},{"id":"https://openalex.org/G2657530671","display_name":"Renovation of Research Facilities in the Department of  Chemistry;","funder_award_id":"6220241","funder_id":"https://openalex.org/F4320306076","funder_display_name":"National Science Foundation"},{"id":"https://openalex.org/G3090105490","display_name":null,"funder_award_id":"62272151","funder_id":"https://openalex.org/F4320321001","funder_display_name":"National Natural Science Foundation of China"},{"id":"https://openalex.org/G3118254216","display_name":"III: Medium: Collaborative Research: An Extensible Heterogeneous Network Embedding Framework with Application Specific Adaptation","funder_award_id":"1763325","funder_id":"https://openalex.org/F4320306076","funder_display_name":"National Science Foundation"},{"id":"https://openalex.org/G3317480652","display_name":null,"funder_award_id":"Science","funder_id":"https://openalex.org/F4320321001","funder_display_name":"National Natural Science Foundation of China"},{"id":"https://openalex.org/G391238517","display_name":null,"funder_award_id":", and","funder_id":"https://openalex.org/F4320321001","funder_display_name":"National Natural Science Foundation of China"},{"id":"https://openalex.org/G4020255992","display_name":null,"funder_award_id":"Project","funder_id":"https://openalex.org/F4320321001","funder_display_name":"National Natural Science Foundation of China"},{"id":"https://openalex.org/G4147909136","display_name":null,"funder_award_id":"2019RS1060","funder_id":"https://openalex.org/F4320321001","funder_display_name":"National Natural Science Foundation of China"},{"id":"https://openalex.org/G4320322031","display_name":"III: Medium: Collaborative Research: Self-Supervised Recommender System Learning with Application Specific Adaption","funder_award_id":"2106758","funder_id":"https://openalex.org/F4320306076","funder_display_name":"National Science Foundation"},{"id":"https://openalex.org/G4335622648","display_name":null,"funder_award_id":"6227215","funder_id":"https://openalex.org/F4320321001","funder_display_name":"National Natural Science Foundation of China"},{"id":"https://openalex.org/G4430803433","display_name":null,"funder_award_id":"61972138","funder_id":"https://openalex.org/F4320321001","funder_display_name":"National Natural Science Foundation of China"},{"id":"https://openalex.org/G4471616908","display_name":null,"funder_award_id":"U21A20427","funder_id":"https://openalex.org/F4320306076","funder_display_name":"National Science Foundation"},{"id":"https://openalex.org/G4721220503","display_name":null,"funder_award_id":"190932","funder_id":"https://openalex.org/F4320306076","funder_display_name":"National Science Foundation"},{"id":"https://openalex.org/G4993214521","display_name":null,"funder_award_id":"2022JJ40451","funder_id":"https://openalex.org/F4320322843","funder_display_name":"Natural Science Foundation of\u00a0Hunan Province"},{"id":"https://openalex.org/G5151131531","display_name":null,"funder_award_id":"2020YFC0832405","funder_id":"https://openalex.org/F4320321001","funder_display_name":"National Natural Science Foundation of China"},{"id":"https://openalex.org/G5570204100","display_name":null,"funder_award_id":"U21A204","funder_id":"https://openalex.org/F4320321001","funder_display_name":"National Natural Science Foundation of China"},{"id":"https://openalex.org/G5722720762","display_name":null,"funder_award_id":"III-2106758","funder_id":"https://openalex.org/F4320306076","funder_display_name":"National Science Foundation"},{"id":"https://openalex.org/G5760752404","display_name":null,"funder_award_id":"Projects","funder_id":"https://openalex.org/F4320321001","funder_display_name":"National Natural Science Foundation of China"},{"id":"https://openalex.org/G5828585638","display_name":null,"funder_award_id":"202413","funder_id":"https://openalex.org/F4320321001","funder_display_name":"National Natural Science Foundation of China"},{"id":"https://openalex.org/G5939423041","display_name":null,"funder_award_id":"Technology","funder_id":"https://openalex.org/F4320321001","funder_display_name":"National Natural Science Foundation of China"},{"id":"https://openalex.org/G5994120800","display_name":null,"funder_award_id":"Natural","funder_id":"https://openalex.org/F4320321001","funder_display_name":"National Natural Science Foundation of China"},{"id":"https://openalex.org/G7033253288","display_name":null,"funder_award_id":"Grants","funder_id":"https://openalex.org/F4320321001","funder_display_name":"National Natural Science Foundation of China"},{"id":"https://openalex.org/G7176768706","display_name":null,"funder_award_id":"2023JJ30161","funder_id":"https://openalex.org/F4320322843","funder_display_name":"Natural Science Foundation of\u00a0Hunan Province"},{"id":"https://openalex.org/G7608752429","display_name":null,"funder_award_id":"Talent","funder_id":"https://openalex.org/F4320321001","funder_display_name":"National Natural Science Foundation of China"},{"id":"https://openalex.org/G7633400475","display_name":null,"funder_award_id":"III-1763325","funder_id":"https://openalex.org/F4320306076","funder_display_name":"National Science Foundation"},{"id":"https://openalex.org/G7817793019","display_name":null,"funder_award_id":"III-1909323","funder_id":"https://openalex.org/F4320306076","funder_display_name":"National Science Foundation"},{"id":"https://openalex.org/G848032724","display_name":null,"funder_award_id":"Science","funder_id":"https://openalex.org/F4320306076","funder_display_name":"National Science Foundation"},{"id":"https://openalex.org/G8513333314","display_name":null,"funder_award_id":"2021ZD01","funder_id":"https://openalex.org/F4320321001","funder_display_name":"National Natural Science Foundation of China"},{"id":"https://openalex.org/G883900857","display_name":null,"funder_award_id":"SaTC-1930941","funder_id":"https://openalex.org/F4320306076","funder_display_name":"National Science Foundation"},{"id":"https://openalex.org/G8857444491","display_name":"Seeing Virtually: Toward a Vision of Teaching Physics in 3-D Space","funder_award_id":"2202413","funder_id":"https://openalex.org/F4320306076","funder_display_name":"National Science Foundation"},{"id":"https://openalex.org/G8882514419","display_name":null,"funder_award_id":"62202413","funder_id":"https://openalex.org/F4320321001","funder_display_name":"National Natural Science Foundation of China"},{"id":"https://openalex.org/G8955107213","display_name":null,"funder_award_id":"Major","funder_id":"https://openalex.org/F4320321001","funder_display_name":"National Natural Science Foundation of China"},{"id":"https://openalex.org/G979281235","display_name":"SaTC: CORE: Small: Collaborative: Learning Dynamic and Robust Defenses Against Co-Adaptive Spammers","funder_award_id":"1930941","funder_id":"https://openalex.org/F4320306076","funder_display_name":"National Science Foundation"}],"funders":[{"id":"https://openalex.org/F4320306076","display_name":"National Science Foundation","ror":"https://ror.org/021nxhr62"},{"id":"https://openalex.org/F4320321001","display_name":"National Natural Science Foundation of China","ror":"https://ror.org/01h0zpd94"},{"id":"https://openalex.org/F4320322843","display_name":"Natural Science Foundation of\u00a0Hunan Province","ror":null}],"has_content":{"pdf":true,"grobid_xml":false},"content_urls":{"pdf":"https://content.openalex.org/works/W4380136659.pdf"},"referenced_works_count":160,"referenced_works":["https://openalex.org/W569478347","https://openalex.org/W1018047830","https://openalex.org/W1888005072","https://openalex.org/W1975147762","https://openalex.org/W2036291018","https://openalex.org/W2054768549","https://openalex.org/W2090891622","https://openalex.org/W2091439417","https://openalex.org/W2106417713","https://openalex.org/W2117397379","https://openalex.org/W2119002393","https://openalex.org/W2120317715","https://openalex.org/W2130942839","https://openalex.org/W2135037015","https://openalex.org/W2145578524","https://openalex.org/W2154851992","https://openalex.org/W2158299492","https://openalex.org/W2200548835","https://openalex.org/W2387462954","https://openalex.org/W2393319904","https://openalex.org/W2515027347","https://openalex.org/W2531563875","https://openalex.org/W2531708927","https://openalex.org/W2589489260","https://openalex.org/W2605325415","https://openalex.org/W2607500032","https://openalex.org/W2608081584","https://openalex.org/W2749279690","https://openalex.org/W2767891136","https://openalex.org/W2777416523","https://openalex.org/W2786016794","https://openalex.org/W2789789321","https://openalex.org/W2802200505","https://openalex.org/W2896457183","https://openalex.org/W2911489562","https://openalex.org/W2913560138","https://openalex.org/W2914874661","https://openalex.org/W2937594636","https://openalex.org/W2943714799","https://openalex.org/W2945027804","https://openalex.org/W2946099214","https://openalex.org/W2946438679","https://openalex.org/W2949311246","https://openalex.org/W2962756421","https://openalex.org/W2964015378","https://openalex.org/W2964113829","https://openalex.org/W2964465226","https://openalex.org/W2965857891","https://openalex.org/W2965993245","https://openalex.org/W2970066309","https://openalex.org/W2972370735","https://openalex.org/W2972392269","https://openalex.org/W2975498843","https://openalex.org/W2977707586","https://openalex.org/W2987479113","https://openalex.org/W2992752586","https://openalex.org/W2995481601","https://openalex.org/W2998571806","https://openalex.org/W3003265726","https://openalex.org/W3018980093","https://openalex.org/W3020759564","https://openalex.org/W3022228001","https://openalex.org/W3024894285","https://openalex.org/W3047785621","https://openalex.org/W3048788615","https://openalex.org/W3087406311","https://openalex.org/W3088646411","https://openalex.org/W3089843526","https://openalex.org/W3092790415","https://openalex.org/W3093988619","https://openalex.org/W3094502228","https://openalex.org/W3095775920","https://openalex.org/W3102245839","https://openalex.org/W3104097132","https://openalex.org/W3106439716","https://openalex.org/W3108458441","https://openalex.org/W3116099552","https://openalex.org/W3132689447","https://openalex.org/W3135761017","https://openalex.org/W3139253280","https://openalex.org/W3154258817","https://openalex.org/W3157889929","https://openalex.org/W3160363665","https://openalex.org/W3172000897","https://openalex.org/W3177828909","https://openalex.org/W3179358925","https://openalex.org/W3198755792","https://openalex.org/W3204360269","https://openalex.org/W3205082786","https://openalex.org/W3205207815","https://openalex.org/W3207365242","https://openalex.org/W3208102118","https://openalex.org/W3209056694","https://openalex.org/W3212567773","https://openalex.org/W3213715512","https://openalex.org/W4200042293","https://openalex.org/W4200227922","https://openalex.org/W4205463297","https://openalex.org/W4211219865","https://openalex.org/W4213069590","https://openalex.org/W4213077304","https://openalex.org/W4214621766","https://openalex.org/W4214868967","https://openalex.org/W4214932602","https://openalex.org/W4220655797","https://openalex.org/W4220757799","https://openalex.org/W4220796987","https://openalex.org/W4224322651","https://openalex.org/W4224946912","https://openalex.org/W4228996904","https://openalex.org/W4229369522","https://openalex.org/W4240541820","https://openalex.org/W4281850946","https://openalex.org/W4283389995","https://openalex.org/W4285138922","https://openalex.org/W4285165731","https://openalex.org/W4285794944","https://openalex.org/W4286373989","https://openalex.org/W4292779060","https://openalex.org/W4294558607","https://openalex.org/W4295298624","https://openalex.org/W4295780708","https://openalex.org/W4303650090","https://openalex.org/W4306317062","https://openalex.org/W4307093167","https://openalex.org/W4307425304","https://openalex.org/W4307447012","https://openalex.org/W4309218736","https://openalex.org/W4312210475","https://openalex.org/W4313405519","https://openalex.org/W4318150241","https://openalex.org/W4322614756","https://openalex.org/W4360591883","https://openalex.org/W6626744847","https://openalex.org/W6679436768","https://openalex.org/W6685350579","https://openalex.org/W6726873649","https://openalex.org/W6730084236","https://openalex.org/W6736685754","https://openalex.org/W6738964360","https://openalex.org/W6755207826","https://openalex.org/W6761546956","https://openalex.org/W6761961326","https://openalex.org/W6762462580","https://openalex.org/W6767098714","https://openalex.org/W6770446764","https://openalex.org/W6777984693","https://openalex.org/W6778883912","https://openalex.org/W6779393347","https://openalex.org/W6779974647","https://openalex.org/W6784196213","https://openalex.org/W6784333009","https://openalex.org/W6786619492","https://openalex.org/W6791924430","https://openalex.org/W6794998520","https://openalex.org/W6797035790","https://openalex.org/W6802547416","https://openalex.org/W6808168631","https://openalex.org/W6846639710","https://openalex.org/W6848564068"],"related_works":["https://openalex.org/W4375867731","https://openalex.org/W2611989081","https://openalex.org/W2480711475","https://openalex.org/W2731899572","https://openalex.org/W4230611425","https://openalex.org/W4294635752","https://openalex.org/W4304166257","https://openalex.org/W4383066092","https://openalex.org/W3215138031","https://openalex.org/W4380075502"],"abstract_inverted_index":{"Recent":[0],"advances":[1],"and":[2,12,57,66,71,80,85,94,99,117,123,130,143,161,165,179,185],"achievements":[3],"of":[4,36,42,96,102,148,163,183],"artificial":[5],"intelligence":[6],"(AI)":[7],"as":[8,10,91],"well":[9],"deep":[11,81,164,184],"graph":[13,149,166,186],"learning":[14,167,187],"models":[15,152,188],"have":[16],"established":[17],"their":[18],"usefulness":[19],"in":[20,24,33,45,54],"biomedical":[21],"applications,":[22],"especially":[23],"drug-drug":[25],"interactions":[26],"(DDIs).":[27],"DDIs":[28,60,191],"refer":[29],"to":[30,39,126],"a":[31],"change":[32],"the":[34,40,46,77,83,92,100,127,145,159,175],"effect":[35],"one":[37],"drug":[38,44,55],"presence":[41],"another":[43],"human":[47],"body,":[48],"which":[49],"plays":[50],"an":[51,69,121],"essential":[52],"role":[53],"discovery":[56],"clinical":[58,64],"research.":[59],"prediction":[61],"through":[62],"traditional":[63],"trials":[65],"experiments":[67],"is":[68],"expensive":[70],"time-consuming":[72],"process.":[73],"To":[74],"correctly":[75],"apply":[76],"advanced":[78],"AI":[79],"learning,":[82],"developer":[84],"user":[86],"meet":[87],"various":[88],"challenges":[89,178],"such":[90],"availability":[93],"encoding":[95],"data":[97],"resources,":[98],"design":[101],"computational":[103],"methods.":[104],"This":[105],"review":[106],"summarizes":[107],"chemical":[108],"structure":[109],"based,":[110,112],"network":[111,151],"natural":[113],"language":[114],"processing":[115],"based":[116],"hybrid":[118],"methods,":[119],"providing":[120],"updated":[122],"accessible":[124],"guide":[125],"broad":[128],"researchers":[129],"development":[131],"community":[132],"with":[133],"different":[134],"domain":[135],"knowledge.":[136],"We":[137,157,173],"introduce":[138],"widely":[139],"used":[140],"molecular":[141,155],"representation":[142],"describe":[144],"theoretical":[146],"frameworks":[147],"neural":[150],"for":[153,189],"representing":[154],"structures.":[156],"present":[158],"advantages":[160],"disadvantages":[162],"methods":[168],"by":[169],"performing":[170],"comparative":[171],"experiments.":[172],"discuss":[174],"potential":[176],"technical":[177],"highlight":[180],"future":[181],"directions":[182],"accelerating":[190],"prediction.":[192]},"counts_by_year":[{"year":2026,"cited_by_count":9},{"year":2025,"cited_by_count":35},{"year":2024,"cited_by_count":32},{"year":2023,"cited_by_count":8}],"updated_date":"2026-04-15T08:11:43.952461","created_date":"2025-10-10T00:00:00"}
