{"id":"https://openalex.org/W4382181479","doi":"https://doi.org/10.1093/bib/bbad234","title":"Predicting potential small molecule\u2013miRNA associations utilizing truncated schatten p-norm","display_name":"Predicting potential small molecule\u2013miRNA associations utilizing truncated schatten p-norm","publication_year":2023,"publication_date":"2023-06-26","ids":{"openalex":"https://openalex.org/W4382181479","doi":"https://doi.org/10.1093/bib/bbad234","pmid":"https://pubmed.ncbi.nlm.nih.gov/37366591"},"language":"en","primary_location":{"id":"doi:10.1093/bib/bbad234","is_oa":false,"landing_page_url":"https://doi.org/10.1093/bib/bbad234","pdf_url":null,"source":{"id":"https://openalex.org/S91767247","display_name":"Briefings in Bioinformatics","issn_l":"1467-5463","issn":["1467-5463","1477-4054"],"is_oa":false,"is_in_doaj":true,"is_core":true,"host_organization":"https://openalex.org/P4310311648","host_organization_name":"Oxford University Press","host_organization_lineage":["https://openalex.org/P4310311648","https://openalex.org/P4310311647"],"host_organization_lineage_names":["Oxford University Press","University of Oxford"],"type":"journal"},"license":null,"license_id":null,"version":"publishedVersion","is_accepted":true,"is_published":true,"raw_source_name":"Briefings in Bioinformatics","raw_type":"journal-article"},"type":"article","indexed_in":["crossref","doaj","pubmed"],"open_access":{"is_oa":false,"oa_status":"closed","oa_url":null,"any_repository_has_fulltext":false},"authorships":[{"author_position":"first","author":{"id":"https://openalex.org/A5100389987","display_name":"Shudong Wang","orcid":"https://orcid.org/0000-0003-4360-6718"},"institutions":[{"id":"https://openalex.org/I4210128818","display_name":"Institute of Software","ror":"https://ror.org/033dfsn42","country_code":"CN","type":"facility","lineage":["https://openalex.org/I19820366","https://openalex.org/I4210128818"]},{"id":"https://openalex.org/I4210162190","display_name":"China University of Petroleum, East China","ror":"https://ror.org/05gbn2817","country_code":"CN","type":"education","lineage":["https://openalex.org/I4210162190"]}],"countries":["CN"],"is_corresponding":false,"raw_author_name":"Shudong Wang","raw_affiliation_strings":["College of Computer Science and Technology, Qingdao Institute of Software, China University of Petroleum , Qingdao 266580 , China"],"raw_orcid":"https://orcid.org/0000-0003-4360-6718","affiliations":[{"raw_affiliation_string":"College of Computer Science and Technology, Qingdao Institute of Software, China University of Petroleum , Qingdao 266580 , China","institution_ids":["https://openalex.org/I4210128818","https://openalex.org/I4210162190"]}]},{"author_position":"middle","author":{"id":"https://openalex.org/A5033342570","display_name":"Tiyao Liu","orcid":"https://orcid.org/0009-0004-9140-3653"},"institutions":[{"id":"https://openalex.org/I4210128818","display_name":"Institute of Software","ror":"https://ror.org/033dfsn42","country_code":"CN","type":"facility","lineage":["https://openalex.org/I19820366","https://openalex.org/I4210128818"]},{"id":"https://openalex.org/I4210162190","display_name":"China University of Petroleum, East China","ror":"https://ror.org/05gbn2817","country_code":"CN","type":"education","lineage":["https://openalex.org/I4210162190"]}],"countries":["CN"],"is_corresponding":false,"raw_author_name":"Tiyao Liu","raw_affiliation_strings":["College of Computer Science and Technology, Qingdao Institute of Software, China University of Petroleum , Qingdao 266580 , China"],"raw_orcid":"https://orcid.org/0009-0004-9140-3653","affiliations":[{"raw_affiliation_string":"College of Computer Science and Technology, Qingdao Institute of Software, China University of Petroleum , Qingdao 266580 , China","institution_ids":["https://openalex.org/I4210128818","https://openalex.org/I4210162190"]}]},{"author_position":"middle","author":{"id":"https://openalex.org/A5071939530","display_name":"Chuanru Ren","orcid":"https://orcid.org/0000-0002-2708-1491"},"institutions":[{"id":"https://openalex.org/I4210128818","display_name":"Institute of Software","ror":"https://ror.org/033dfsn42","country_code":"CN","type":"facility","lineage":["https://openalex.org/I19820366","https://openalex.org/I4210128818"]},{"id":"https://openalex.org/I4210162190","display_name":"China University of Petroleum, East China","ror":"https://ror.org/05gbn2817","country_code":"CN","type":"education","lineage":["https://openalex.org/I4210162190"]}],"countries":["CN"],"is_corresponding":false,"raw_author_name":"Chuanru Ren","raw_affiliation_strings":["College of Computer Science and Technology, Qingdao Institute of Software, China University of Petroleum , Qingdao 266580 , China"],"raw_orcid":null,"affiliations":[{"raw_affiliation_string":"College of Computer Science and Technology, Qingdao Institute of Software, China University of Petroleum , Qingdao 266580 , China","institution_ids":["https://openalex.org/I4210128818","https://openalex.org/I4210162190"]}]},{"author_position":"middle","author":{"id":"https://openalex.org/A5055241786","display_name":"Wenhao Wu","orcid":"https://orcid.org/0000-0002-2244-6543"},"institutions":[{"id":"https://openalex.org/I4210128818","display_name":"Institute of Software","ror":"https://ror.org/033dfsn42","country_code":"CN","type":"facility","lineage":["https://openalex.org/I19820366","https://openalex.org/I4210128818"]},{"id":"https://openalex.org/I4210162190","display_name":"China University of Petroleum, East China","ror":"https://ror.org/05gbn2817","country_code":"CN","type":"education","lineage":["https://openalex.org/I4210162190"]}],"countries":["CN"],"is_corresponding":false,"raw_author_name":"Wenhao Wu","raw_affiliation_strings":["College of Computer Science and Technology, Qingdao Institute of Software, China University of Petroleum , Qingdao 266580 , China"],"raw_orcid":null,"affiliations":[{"raw_affiliation_string":"College of Computer Science and Technology, Qingdao Institute of Software, China University of Petroleum , Qingdao 266580 , China","institution_ids":["https://openalex.org/I4210128818","https://openalex.org/I4210162190"]}]},{"author_position":"middle","author":{"id":"https://openalex.org/A5100693125","display_name":"Zhiyuan Zhao","orcid":"https://orcid.org/0009-0006-4789-5173"},"institutions":[{"id":"https://openalex.org/I4210128818","display_name":"Institute of Software","ror":"https://ror.org/033dfsn42","country_code":"CN","type":"facility","lineage":["https://openalex.org/I19820366","https://openalex.org/I4210128818"]},{"id":"https://openalex.org/I4210162190","display_name":"China University of Petroleum, East China","ror":"https://ror.org/05gbn2817","country_code":"CN","type":"education","lineage":["https://openalex.org/I4210162190"]}],"countries":["CN"],"is_corresponding":false,"raw_author_name":"Zhiyuan Zhao","raw_affiliation_strings":["College of Computer Science and Technology, Qingdao Institute of Software, China University of Petroleum , Qingdao 266580 , China"],"raw_orcid":null,"affiliations":[{"raw_affiliation_string":"College of Computer Science and Technology, Qingdao Institute of Software, China University of Petroleum , Qingdao 266580 , China","institution_ids":["https://openalex.org/I4210128818","https://openalex.org/I4210162190"]}]},{"author_position":"middle","author":{"id":"https://openalex.org/A5021584178","display_name":"Shanchen Pang","orcid":"https://orcid.org/0000-0003-3734-2736"},"institutions":[{"id":"https://openalex.org/I4210128818","display_name":"Institute of Software","ror":"https://ror.org/033dfsn42","country_code":"CN","type":"facility","lineage":["https://openalex.org/I19820366","https://openalex.org/I4210128818"]},{"id":"https://openalex.org/I4210162190","display_name":"China University of Petroleum, East China","ror":"https://ror.org/05gbn2817","country_code":"CN","type":"education","lineage":["https://openalex.org/I4210162190"]}],"countries":["CN"],"is_corresponding":false,"raw_author_name":"Shanchen Pang","raw_affiliation_strings":["College of Computer Science and Technology, Qingdao Institute of Software, China University of Petroleum , Qingdao 266580 , China"],"raw_orcid":"https://orcid.org/0000-0003-3734-2736","affiliations":[{"raw_affiliation_string":"College of Computer Science and Technology, Qingdao Institute of Software, China University of Petroleum , Qingdao 266580 , China","institution_ids":["https://openalex.org/I4210128818","https://openalex.org/I4210162190"]}]},{"author_position":"last","author":{"id":"https://openalex.org/A5100746477","display_name":"Yuanyuan Zhang","orcid":"https://orcid.org/0000-0003-3935-3201"},"institutions":[{"id":"https://openalex.org/I143413998","display_name":"Qingdao University of Science and Technology","ror":"https://ror.org/041j8js14","country_code":"CN","type":"education","lineage":["https://openalex.org/I143413998"]},{"id":"https://openalex.org/I44468530","display_name":"Qingdao University of Technology","ror":"https://ror.org/01qzc0f54","country_code":"CN","type":"education","lineage":["https://openalex.org/I44468530"]}],"countries":["CN"],"is_corresponding":true,"raw_author_name":"Yuanyuan Zhang","raw_affiliation_strings":["College of Information and Control Engineering, Qingdao University of Technology , Qingdao 266580 , China"],"raw_orcid":"https://orcid.org/0000-0003-3935-3201","affiliations":[{"raw_affiliation_string":"College of Information and Control Engineering, Qingdao University of Technology , Qingdao 266580 , China","institution_ids":["https://openalex.org/I143413998","https://openalex.org/I44468530"]}]}],"institutions":[],"countries_distinct_count":1,"institutions_distinct_count":7,"corresponding_author_ids":["https://openalex.org/A5100746477"],"corresponding_institution_ids":["https://openalex.org/I143413998","https://openalex.org/I44468530"],"apc_list":{"value":4011,"currency":"USD","value_usd":4011},"apc_paid":null,"fwci":4.1619,"has_fulltext":false,"cited_by_count":18,"citation_normalized_percentile":{"value":0.94244785,"is_in_top_1_percent":false,"is_in_top_10_percent":true},"cited_by_percentile_year":{"min":90,"max":99},"biblio":{"volume":"24","issue":"4","first_page":null,"last_page":null},"is_retracted":false,"is_paratext":false,"is_xpac":false,"primary_topic":{"id":"https://openalex.org/T10062","display_name":"MicroRNA in disease regulation","score":1.0,"subfield":{"id":"https://openalex.org/subfields/1306","display_name":"Cancer Research"},"field":{"id":"https://openalex.org/fields/13","display_name":"Biochemistry, Genetics and Molecular Biology"},"domain":{"id":"https://openalex.org/domains/1","display_name":"Life Sciences"}},"topics":[{"id":"https://openalex.org/T10062","display_name":"MicroRNA in disease regulation","score":1.0,"subfield":{"id":"https://openalex.org/subfields/1306","display_name":"Cancer Research"},"field":{"id":"https://openalex.org/fields/13","display_name":"Biochemistry, Genetics and Molecular Biology"},"domain":{"id":"https://openalex.org/domains/1","display_name":"Life Sciences"}},{"id":"https://openalex.org/T10515","display_name":"Cancer-related molecular mechanisms research","score":0.9987999796867371,"subfield":{"id":"https://openalex.org/subfields/1306","display_name":"Cancer Research"},"field":{"id":"https://openalex.org/fields/13","display_name":"Biochemistry, Genetics and Molecular Biology"},"domain":{"id":"https://openalex.org/domains/1","display_name":"Life Sciences"}},{"id":"https://openalex.org/T10604","display_name":"RNA Research and Splicing","score":0.9966999888420105,"subfield":{"id":"https://openalex.org/subfields/1312","display_name":"Molecular Biology"},"field":{"id":"https://openalex.org/fields/13","display_name":"Biochemistry, Genetics and Molecular Biology"},"domain":{"id":"https://openalex.org/domains/1","display_name":"Life Sciences"}}],"keywords":[{"id":"https://openalex.org/keywords/adjacency-matrix","display_name":"Adjacency matrix","score":0.7403639554977417},{"id":"https://openalex.org/keywords/computer-science","display_name":"Computer science","score":0.5192787647247314},{"id":"https://openalex.org/keywords/similarity","display_name":"Similarity (geometry)","score":0.5052149891853333},{"id":"https://openalex.org/keywords/singular-value","display_name":"Singular value","score":0.49913644790649414},{"id":"https://openalex.org/keywords/matrix-norm","display_name":"Matrix norm","score":0.47911667823791504},{"id":"https://openalex.org/keywords/norm","display_name":"Norm (philosophy)","score":0.4473360478878021},{"id":"https://openalex.org/keywords/algorithm","display_name":"Algorithm","score":0.43936580419540405},{"id":"https://openalex.org/keywords/rank","display_name":"Rank (graph theory)","score":0.4383660554885864},{"id":"https://openalex.org/keywords/mathematics","display_name":"Mathematics","score":0.4157962501049042},{"id":"https://openalex.org/keywords/data-mining","display_name":"Data mining","score":0.34919479489326477},{"id":"https://openalex.org/keywords/artificial-intelligence","display_name":"Artificial intelligence","score":0.34152287244796753},{"id":"https://openalex.org/keywords/theoretical-computer-science","display_name":"Theoretical computer science","score":0.22389382123947144},{"id":"https://openalex.org/keywords/combinatorics","display_name":"Combinatorics","score":0.1556541621685028}],"concepts":[{"id":"https://openalex.org/C180356752","wikidata":"https://www.wikidata.org/wiki/Q727035","display_name":"Adjacency matrix","level":3,"score":0.7403639554977417},{"id":"https://openalex.org/C41008148","wikidata":"https://www.wikidata.org/wiki/Q21198","display_name":"Computer science","level":0,"score":0.5192787647247314},{"id":"https://openalex.org/C103278499","wikidata":"https://www.wikidata.org/wiki/Q254465","display_name":"Similarity (geometry)","level":3,"score":0.5052149891853333},{"id":"https://openalex.org/C109282560","wikidata":"https://www.wikidata.org/wiki/Q4166054","display_name":"Singular value","level":3,"score":0.49913644790649414},{"id":"https://openalex.org/C92207270","wikidata":"https://www.wikidata.org/wiki/Q939253","display_name":"Matrix norm","level":3,"score":0.47911667823791504},{"id":"https://openalex.org/C191795146","wikidata":"https://www.wikidata.org/wiki/Q3878446","display_name":"Norm (philosophy)","level":2,"score":0.4473360478878021},{"id":"https://openalex.org/C11413529","wikidata":"https://www.wikidata.org/wiki/Q8366","display_name":"Algorithm","level":1,"score":0.43936580419540405},{"id":"https://openalex.org/C164226766","wikidata":"https://www.wikidata.org/wiki/Q7293202","display_name":"Rank (graph theory)","level":2,"score":0.4383660554885864},{"id":"https://openalex.org/C33923547","wikidata":"https://www.wikidata.org/wiki/Q395","display_name":"Mathematics","level":0,"score":0.4157962501049042},{"id":"https://openalex.org/C124101348","wikidata":"https://www.wikidata.org/wiki/Q172491","display_name":"Data mining","level":1,"score":0.34919479489326477},{"id":"https://openalex.org/C154945302","wikidata":"https://www.wikidata.org/wiki/Q11660","display_name":"Artificial intelligence","level":1,"score":0.34152287244796753},{"id":"https://openalex.org/C80444323","wikidata":"https://www.wikidata.org/wiki/Q2878974","display_name":"Theoretical computer science","level":1,"score":0.22389382123947144},{"id":"https://openalex.org/C114614502","wikidata":"https://www.wikidata.org/wiki/Q76592","display_name":"Combinatorics","level":1,"score":0.1556541621685028},{"id":"https://openalex.org/C62520636","wikidata":"https://www.wikidata.org/wiki/Q944","display_name":"Quantum mechanics","level":1,"score":0.0},{"id":"https://openalex.org/C158693339","wikidata":"https://www.wikidata.org/wiki/Q190524","display_name":"Eigenvalues and eigenvectors","level":2,"score":0.0},{"id":"https://openalex.org/C199539241","wikidata":"https://www.wikidata.org/wiki/Q7748","display_name":"Law","level":1,"score":0.0},{"id":"https://openalex.org/C17744445","wikidata":"https://www.wikidata.org/wiki/Q36442","display_name":"Political science","level":0,"score":0.0},{"id":"https://openalex.org/C121332964","wikidata":"https://www.wikidata.org/wiki/Q413","display_name":"Physics","level":0,"score":0.0},{"id":"https://openalex.org/C132525143","wikidata":"https://www.wikidata.org/wiki/Q141488","display_name":"Graph","level":2,"score":0.0},{"id":"https://openalex.org/C115961682","wikidata":"https://www.wikidata.org/wiki/Q860623","display_name":"Image (mathematics)","level":2,"score":0.0}],"mesh":[{"descriptor_ui":"D000465","descriptor_name":"Algorithms","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D000465","descriptor_name":"Algorithms","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D000465","descriptor_name":"Algorithms","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D006801","descriptor_name":"Humans","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D006801","descriptor_name":"Humans","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D006801","descriptor_name":"Humans","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D019295","descriptor_name":"Computational Biology","qualifier_ui":"Q000379","qualifier_name":"methods","is_major_topic":false},{"descriptor_ui":"D019295","descriptor_name":"Computational Biology","qualifier_ui":"Q000379","qualifier_name":"methods","is_major_topic":false},{"descriptor_ui":"D019295","descriptor_name":"Computational Biology","qualifier_ui":"Q000379","qualifier_name":"methods","is_major_topic":false},{"descriptor_ui":"D035683","descriptor_name":"MicroRNAs","qualifier_ui":"Q000235","qualifier_name":"genetics","is_major_topic":true},{"descriptor_ui":"D035683","descriptor_name":"MicroRNAs","qualifier_ui":"Q000235","qualifier_name":"genetics","is_major_topic":true},{"descriptor_ui":"D035683","descriptor_name":"MicroRNAs","qualifier_ui":"Q000235","qualifier_name":"genetics","is_major_topic":true}],"locations_count":2,"locations":[{"id":"doi:10.1093/bib/bbad234","is_oa":false,"landing_page_url":"https://doi.org/10.1093/bib/bbad234","pdf_url":null,"source":{"id":"https://openalex.org/S91767247","display_name":"Briefings in Bioinformatics","issn_l":"1467-5463","issn":["1467-5463","1477-4054"],"is_oa":false,"is_in_doaj":true,"is_core":true,"host_organization":"https://openalex.org/P4310311648","host_organization_name":"Oxford University Press","host_organization_lineage":["https://openalex.org/P4310311648","https://openalex.org/P4310311647"],"host_organization_lineage_names":["Oxford University Press","University of Oxford"],"type":"journal"},"license":null,"license_id":null,"version":"publishedVersion","is_accepted":true,"is_published":true,"raw_source_name":"Briefings in Bioinformatics","raw_type":"journal-article"},{"id":"pmid:37366591","is_oa":false,"landing_page_url":"https://pubmed.ncbi.nlm.nih.gov/37366591","pdf_url":null,"source":{"id":"https://openalex.org/S4306525036","display_name":"PubMed","issn_l":null,"issn":null,"is_oa":false,"is_in_doaj":false,"is_core":false,"host_organization":"https://openalex.org/I1299303238","host_organization_name":"National Institutes of Health","host_organization_lineage":["https://openalex.org/I1299303238"],"host_organization_lineage_names":[],"type":"repository"},"license":null,"license_id":null,"version":"publishedVersion","is_accepted":true,"is_published":true,"raw_source_name":"Briefings in bioinformatics","raw_type":null}],"best_oa_location":null,"sustainable_development_goals":[],"awards":[],"funders":[],"has_content":{"grobid_xml":false,"pdf":false},"content_urls":null,"referenced_works_count":70,"referenced_works":["https://openalex.org/W144423133","https://openalex.org/W1889514258","https://openalex.org/W1975441976","https://openalex.org/W1978162793","https://openalex.org/W1979537657","https://openalex.org/W1984684840","https://openalex.org/W1997788346","https://openalex.org/W1998647454","https://openalex.org/W2047913600","https://openalex.org/W2047967134","https://openalex.org/W2070777085","https://openalex.org/W2079558799","https://openalex.org/W2083381199","https://openalex.org/W2087975583","https://openalex.org/W2106210472","https://openalex.org/W2106448739","https://openalex.org/W2113072832","https://openalex.org/W2117391818","https://openalex.org/W2120653843","https://openalex.org/W2123602182","https://openalex.org/W2127553917","https://openalex.org/W2128768066","https://openalex.org/W2130979840","https://openalex.org/W2131883344","https://openalex.org/W2137052779","https://openalex.org/W2153210075","https://openalex.org/W2158590632","https://openalex.org/W2170711824","https://openalex.org/W2181898342","https://openalex.org/W2203231406","https://openalex.org/W2364692879","https://openalex.org/W2406354600","https://openalex.org/W2419167533","https://openalex.org/W2586630468","https://openalex.org/W2765950793","https://openalex.org/W2786578820","https://openalex.org/W2790552352","https://openalex.org/W2804741160","https://openalex.org/W2809893308","https://openalex.org/W2875816355","https://openalex.org/W2884985642","https://openalex.org/W2896829849","https://openalex.org/W2896907688","https://openalex.org/W2921814376","https://openalex.org/W2946952196","https://openalex.org/W2960557205","https://openalex.org/W2991281491","https://openalex.org/W3021506718","https://openalex.org/W3034218153","https://openalex.org/W3119239860","https://openalex.org/W3195937938","https://openalex.org/W3206601677","https://openalex.org/W4200424115","https://openalex.org/W4224884326","https://openalex.org/W4236965008","https://openalex.org/W4238185726","https://openalex.org/W4294376371","https://openalex.org/W4295088446","https://openalex.org/W4295241431","https://openalex.org/W4297183296","https://openalex.org/W4298208627","https://openalex.org/W4309098239","https://openalex.org/W6662220948","https://openalex.org/W6662532501","https://openalex.org/W6680306614","https://openalex.org/W6681375687","https://openalex.org/W6685572826","https://openalex.org/W6755952022","https://openalex.org/W6776561354","https://openalex.org/W6843839937"],"related_works":["https://openalex.org/W4366831400","https://openalex.org/W2158044763","https://openalex.org/W4298234822","https://openalex.org/W2782047334","https://openalex.org/W3017414697","https://openalex.org/W3174042135","https://openalex.org/W2006601391","https://openalex.org/W2962791795","https://openalex.org/W2409839127","https://openalex.org/W2070653371"],"abstract_inverted_index":{"MicroRNAs":[0],"(miRNAs)":[1],"have":[2,10],"significant":[3],"implications":[4],"in":[5,223],"diverse":[6],"human":[7],"diseases":[8],"and":[9,95,116,140,203],"proven":[11],"to":[12,148,164],"be":[13],"effectively":[14],"targeted":[15],"by":[16,68,81,109,130],"small":[17],"molecules":[18],"(SMs)":[19],"for":[20,41,64,233],"therapeutic":[21],"interventions.":[22],"However,":[23],"current":[24],"SM-miRNA":[25,66,99,107,234],"association":[26,42,235],"prediction":[27,100,128],"models":[28,46],"do":[29],"not":[30],"adequately":[31],"capture":[32],"SM/miRNA":[33,77,93],"similarity.":[34],"Matrix":[35],"completion":[36],"is":[37,229],"an":[38,143],"effective":[39],"method":[40],"prediction,":[43],"but":[44],"existing":[45],"use":[47],"nuclear":[48,185],"norm":[49],"instead":[50],"of":[51,136,168,218,221],"rank":[52,179],"function,":[53],"which":[54],"has":[55],"some":[56],"drawbacks.":[57],"Therefore,":[58,227],"we":[59,103,125,141,155],"proposed":[60],"a":[61,105,158,215,230],"new":[62],"approach":[63],"predicting":[65],"associations":[67,220],"utilizing":[69],"the":[70,76,83,98,118,127,132,150,166,178,184,188],"truncated":[71,133,174],"schatten":[72,134,175],"p-norm":[73,135,176],"(TSPN).":[74],"First,":[75],"similarity":[78,88],"was":[79],"preprocessed":[80],"incorporating":[82],"Gaussian":[84],"interaction":[85],"profile":[86],"kernel":[87],"method.":[89],"This":[90],"identified":[91],"more":[92,181,191],"similarities":[94],"significantly":[96],"improved":[97],"accuracy.":[101],"Next,":[102],"constructed":[104,126],"heterogeneous":[106],"network":[108,119],"combining":[110],"biological":[111],"information":[112],"from":[113],"three":[114],"matrices":[115],"represented":[117],"with":[120],"its":[121],"adjacency":[122,138],"matrix.":[123],"Finally,":[124],"model":[129,232],"minimizing":[131],"this":[137,153],"matrix":[139],"developed":[142],"efficient":[144],"iterative":[145],"algorithmic":[146],"framework":[147],"solve":[149],"model.":[151],"In":[152,210],"framework,":[154],"also":[156],"used":[157],"weighted":[159],"singular":[160,170],"value":[161,171],"shrinkage":[162],"algorithm":[163],"avoid":[165],"problem":[167],"excessive":[169],"shrinkage.":[172],"The":[173],"approximates":[177],"function":[180],"closely":[182],"than":[183],"norm,":[186],"so":[187],"predictions":[189],"are":[190],"accurate.":[192],"We":[193],"performed":[194],"four":[195,224],"different":[196],"cross-validation":[197],"experiments":[198],"on":[199],"two":[200],"separate":[201],"datasets,":[202],"TSPN":[204,222,228],"outperformed":[205],"various":[206],"most":[207],"advanced":[208],"methods.":[209],"addition,":[211],"public":[212],"literature":[213],"confirms":[214],"large":[216],"number":[217],"predictive":[219],"case":[225],"studies.":[226],"reliable":[231],"prediction.":[236]},"counts_by_year":[{"year":2026,"cited_by_count":1},{"year":2025,"cited_by_count":11},{"year":2024,"cited_by_count":5},{"year":2023,"cited_by_count":1}],"updated_date":"2026-05-21T06:26:12.895304","created_date":"2025-10-10T00:00:00"}
