{"id":"https://openalex.org/W4379598685","doi":"https://doi.org/10.1093/bib/bbad208","title":"A Bayesian approach to estimate MHC-peptide binding threshold","display_name":"A Bayesian approach to estimate MHC-peptide binding threshold","publication_year":2023,"publication_date":"2023-06-02","ids":{"openalex":"https://openalex.org/W4379598685","doi":"https://doi.org/10.1093/bib/bbad208","pmid":"https://pubmed.ncbi.nlm.nih.gov/37279464"},"language":"en","primary_location":{"id":"doi:10.1093/bib/bbad208","is_oa":true,"landing_page_url":"https://doi.org/10.1093/bib/bbad208","pdf_url":"https://academic.oup.com/bib/article-pdf/24/4/bbad208/50917076/bbad208.pdf","source":{"id":"https://openalex.org/S91767247","display_name":"Briefings in Bioinformatics","issn_l":"1467-5463","issn":["1467-5463","1477-4054"],"is_oa":false,"is_in_doaj":true,"is_core":true,"host_organization":"https://openalex.org/P4310311648","host_organization_name":"Oxford University Press","host_organization_lineage":["https://openalex.org/P4310311648","https://openalex.org/P4310311647"],"host_organization_lineage_names":["Oxford University Press","University of Oxford"],"type":"journal"},"license":null,"license_id":null,"version":"publishedVersion","is_accepted":true,"is_published":true,"raw_source_name":"Briefings in Bioinformatics","raw_type":"journal-article"},"type":"article","indexed_in":["crossref","doaj","pubmed"],"open_access":{"is_oa":true,"oa_status":"bronze","oa_url":"https://academic.oup.com/bib/article-pdf/24/4/bbad208/50917076/bbad208.pdf","any_repository_has_fulltext":true},"authorships":[{"author_position":"first","author":{"id":"https://openalex.org/A5062630559","display_name":"Ran Liu","orcid":"https://orcid.org/0000-0003-3627-3994"},"institutions":[{"id":"https://openalex.org/I177725633","display_name":"Chinese University of Hong Kong","ror":"https://ror.org/00t33hh48","country_code":"HK","type":"education","lineage":["https://openalex.org/I177725633"]}],"countries":["HK"],"is_corresponding":false,"raw_author_name":"Ran Liu","raw_affiliation_strings":["Department of Statistics, The Chinese University of Hong Kong , Hong Kong SAR , China"],"raw_orcid":null,"affiliations":[{"raw_affiliation_string":"Department of Statistics, The Chinese University of Hong Kong , Hong Kong SAR , China","institution_ids":["https://openalex.org/I177725633"]}]},{"author_position":"middle","author":{"id":"https://openalex.org/A5021719279","display_name":"Ye\u2010Fan Hu","orcid":"https://orcid.org/0000-0002-7834-1476"},"institutions":[{"id":"https://openalex.org/I2800810863","display_name":"Queen Mary Hospital","ror":"https://ror.org/02xkx3e48","country_code":"CN","type":"healthcare","lineage":["https://openalex.org/I1294586568","https://openalex.org/I2800810863"]},{"id":"https://openalex.org/I889458895","display_name":"University of Hong Kong","ror":"https://ror.org/02zhqgq86","country_code":"HK","type":"education","lineage":["https://openalex.org/I889458895"]}],"countries":["CN","HK"],"is_corresponding":false,"raw_author_name":"Ye-Fan Hu","raw_affiliation_strings":["BayVax Biotech Limited, Hong Kong Science Park , Pak Shek Kok, New Territories, Hong Kong SAR , China","Department of Medicine, Li Ka Shing Faculty of Medicine, The University of Hong Kong , 4/F Professional Block, Queen Mary Hospital, 102 Pokfulam Road, Hong Kong SAR , China","School of Biomedical Sciences, Li Ka Shing Faculty of Medicine, The University of Hong Kong , 3/F, Laboratory Block, 21 Sassoon Road, Hong Kong SAR , China"],"raw_orcid":null,"affiliations":[{"raw_affiliation_string":"BayVax Biotech Limited, Hong Kong Science Park , Pak Shek Kok, New Territories, Hong Kong SAR , China","institution_ids":[]},{"raw_affiliation_string":"Department of Medicine, Li Ka Shing Faculty of Medicine, The University of Hong Kong , 4/F Professional Block, Queen Mary Hospital, 102 Pokfulam Road, Hong Kong SAR , China","institution_ids":["https://openalex.org/I2800810863","https://openalex.org/I889458895"]},{"raw_affiliation_string":"School of Biomedical Sciences, Li Ka Shing Faculty of Medicine, The University of Hong Kong , 3/F, Laboratory Block, 21 Sassoon Road, Hong Kong SAR , China","institution_ids":["https://openalex.org/I889458895"]}]},{"author_position":"middle","author":{"id":"https://openalex.org/A5113217968","display_name":"Jian\u2010Dong Huang","orcid":"https://orcid.org/0000-0001-7531-2816"},"institutions":[{"id":"https://openalex.org/I157773358","display_name":"Sun Yat-sen University","ror":"https://ror.org/0064kty71","country_code":"CN","type":"education","lineage":["https://openalex.org/I157773358"]},{"id":"https://openalex.org/I177725633","display_name":"Chinese University of Hong Kong","ror":"https://ror.org/00t33hh48","country_code":"HK","type":"education","lineage":["https://openalex.org/I177725633"]},{"id":"https://openalex.org/I19820366","display_name":"Chinese Academy of Sciences","ror":"https://ror.org/034t30j35","country_code":"CN","type":"government","lineage":["https://openalex.org/I19820366"]},{"id":"https://openalex.org/I4210141719","display_name":"University of Hong Kong - Shenzhen Hospital","ror":"https://ror.org/047w7d678","country_code":"CN","type":"healthcare","lineage":["https://openalex.org/I4210141719"]},{"id":"https://openalex.org/I4210145761","display_name":"Shenzhen Institutes of Advanced Technology","ror":"https://ror.org/04gh4er46","country_code":"CN","type":"facility","lineage":["https://openalex.org/I19820366","https://openalex.org/I4210145761"]},{"id":"https://openalex.org/I889458895","display_name":"University of Hong Kong","ror":"https://ror.org/02zhqgq86","country_code":"HK","type":"education","lineage":["https://openalex.org/I889458895"]}],"countries":["CN","HK"],"is_corresponding":true,"raw_author_name":"Jian-Dong Huang","raw_affiliation_strings":["CAS Key Laboratory of Quantitative Engineering Biology, Shenzhen Institute of Synthetic Biology, Shenzhen Institutes of Advanced Technology, Chinese Academy of Sciences , Shenzhen 518055 , China","Clinical Oncology Center, Shenzhen Key Laboratory for Cancer Metastasis and Personalized Therapy, The University of Hong Kong-Shenzhen Hospital , Shenzhen 518053 , China","Guangdong-Hong Kong Joint Laboratory for RNA Medicine , Sun Yat-Sen University, Guangzhou 510120 , China","School of Biomedical Sciences, Li Ka Shing Faculty of Medicine, The University of Hong Kong , 3/F, Laboratory Block, 21 Sassoon Road, Hong Kong SAR , China","State Key Laboratory of Cognitive and Brain Research, The University of Hong Kong , Hong Kong SAR , China"],"raw_orcid":null,"affiliations":[{"raw_affiliation_string":"CAS Key Laboratory of Quantitative Engineering Biology, Shenzhen Institute of Synthetic Biology, Shenzhen Institutes of Advanced Technology, Chinese Academy of Sciences , Shenzhen 518055 , China","institution_ids":["https://openalex.org/I4210145761","https://openalex.org/I19820366"]},{"raw_affiliation_string":"Clinical Oncology Center, Shenzhen Key Laboratory for Cancer Metastasis and Personalized Therapy, The University of Hong Kong-Shenzhen Hospital , Shenzhen 518053 , China","institution_ids":["https://openalex.org/I889458895","https://openalex.org/I4210141719"]},{"raw_affiliation_string":"Guangdong-Hong Kong Joint Laboratory for RNA Medicine , Sun Yat-Sen University, Guangzhou 510120 , China","institution_ids":["https://openalex.org/I157773358"]},{"raw_affiliation_string":"School of Biomedical Sciences, Li Ka Shing Faculty of Medicine, The University of Hong Kong , 3/F, Laboratory Block, 21 Sassoon Road, Hong Kong SAR , China","institution_ids":["https://openalex.org/I889458895"]},{"raw_affiliation_string":"State Key Laboratory of Cognitive and Brain Research, The University of Hong Kong , Hong Kong SAR , China","institution_ids":["https://openalex.org/I177725633","https://openalex.org/I889458895"]}]},{"author_position":"last","author":{"id":"https://openalex.org/A5060018541","display_name":"Xiaodan Fan","orcid":"https://orcid.org/0000-0002-2744-9030"},"institutions":[{"id":"https://openalex.org/I177725633","display_name":"Chinese University of Hong Kong","ror":"https://ror.org/00t33hh48","country_code":"HK","type":"education","lineage":["https://openalex.org/I177725633"]}],"countries":["HK"],"is_corresponding":true,"raw_author_name":"Xiaodan Fan","raw_affiliation_strings":["Department of Statistics, The Chinese University of Hong Kong , Hong Kong SAR , China"],"raw_orcid":null,"affiliations":[{"raw_affiliation_string":"Department of Statistics, The Chinese University of Hong Kong , Hong Kong SAR , China","institution_ids":["https://openalex.org/I177725633"]}]}],"institutions":[],"countries_distinct_count":2,"institutions_distinct_count":4,"corresponding_author_ids":["https://openalex.org/A5060018541","https://openalex.org/A5113217968"],"corresponding_institution_ids":["https://openalex.org/I157773358","https://openalex.org/I177725633","https://openalex.org/I19820366","https://openalex.org/I4210141719","https://openalex.org/I4210145761","https://openalex.org/I889458895"],"apc_list":{"value":4011,"currency":"USD","value_usd":4011},"apc_paid":null,"fwci":0.7063,"has_fulltext":true,"cited_by_count":5,"citation_normalized_percentile":{"value":0.71488793,"is_in_top_1_percent":false,"is_in_top_10_percent":false},"cited_by_percentile_year":{"min":95,"max":98},"biblio":{"volume":"24","issue":"4","first_page":null,"last_page":null},"is_retracted":false,"is_paratext":false,"is_xpac":false,"primary_topic":{"id":"https://openalex.org/T12576","display_name":"vaccines and immunoinformatics approaches","score":1.0,"subfield":{"id":"https://openalex.org/subfields/1312","display_name":"Molecular Biology"},"field":{"id":"https://openalex.org/fields/13","display_name":"Biochemistry, Genetics and Molecular Biology"},"domain":{"id":"https://openalex.org/domains/1","display_name":"Life Sciences"}},"topics":[{"id":"https://openalex.org/T12576","display_name":"vaccines and immunoinformatics approaches","score":1.0,"subfield":{"id":"https://openalex.org/subfields/1312","display_name":"Molecular Biology"},"field":{"id":"https://openalex.org/fields/13","display_name":"Biochemistry, Genetics and Molecular Biology"},"domain":{"id":"https://openalex.org/domains/1","display_name":"Life Sciences"}},{"id":"https://openalex.org/T10580","display_name":"Immunotherapy and Immune Responses","score":0.9991000294685364,"subfield":{"id":"https://openalex.org/subfields/2403","display_name":"Immunology"},"field":{"id":"https://openalex.org/fields/24","display_name":"Immunology and Microbiology"},"domain":{"id":"https://openalex.org/domains/1","display_name":"Life Sciences"}},{"id":"https://openalex.org/T11016","display_name":"Monoclonal and Polyclonal Antibodies Research","score":0.9991000294685364,"subfield":{"id":"https://openalex.org/subfields/2741","display_name":"Radiology, Nuclear Medicine and Imaging"},"field":{"id":"https://openalex.org/fields/27","display_name":"Medicine"},"domain":{"id":"https://openalex.org/domains/4","display_name":"Health Sciences"}}],"keywords":[{"id":"https://openalex.org/keywords/bayesian-probability","display_name":"Bayesian probability","score":0.7259699702262878},{"id":"https://openalex.org/keywords/major-histocompatibility-complex","display_name":"Major histocompatibility complex","score":0.563052773475647},{"id":"https://openalex.org/keywords/computer-science","display_name":"Computer science","score":0.5404850244522095},{"id":"https://openalex.org/keywords/robustness","display_name":"Robustness (evolution)","score":0.5151833295822144},{"id":"https://openalex.org/keywords/threshold-model","display_name":"Threshold model","score":0.48756951093673706},{"id":"https://openalex.org/keywords/computational-biology","display_name":"Computational biology","score":0.40636980533599854},{"id":"https://openalex.org/keywords/artificial-intelligence","display_name":"Artificial intelligence","score":0.35194507241249084},{"id":"https://openalex.org/keywords/data-mining","display_name":"Data mining","score":0.3498079776763916},{"id":"https://openalex.org/keywords/machine-learning","display_name":"Machine learning","score":0.2283315360546112},{"id":"https://openalex.org/keywords/biology","display_name":"Biology","score":0.20619916915893555},{"id":"https://openalex.org/keywords/antigen","display_name":"Antigen","score":0.10846814513206482},{"id":"https://openalex.org/keywords/genetics","display_name":"Genetics","score":0.0851932168006897}],"concepts":[{"id":"https://openalex.org/C107673813","wikidata":"https://www.wikidata.org/wiki/Q812534","display_name":"Bayesian probability","level":2,"score":0.7259699702262878},{"id":"https://openalex.org/C207936829","wikidata":"https://www.wikidata.org/wiki/Q423163","display_name":"Major histocompatibility complex","level":3,"score":0.563052773475647},{"id":"https://openalex.org/C41008148","wikidata":"https://www.wikidata.org/wiki/Q21198","display_name":"Computer science","level":0,"score":0.5404850244522095},{"id":"https://openalex.org/C63479239","wikidata":"https://www.wikidata.org/wiki/Q7353546","display_name":"Robustness (evolution)","level":3,"score":0.5151833295822144},{"id":"https://openalex.org/C202632270","wikidata":"https://www.wikidata.org/wiki/Q7798106","display_name":"Threshold model","level":2,"score":0.48756951093673706},{"id":"https://openalex.org/C70721500","wikidata":"https://www.wikidata.org/wiki/Q177005","display_name":"Computational biology","level":1,"score":0.40636980533599854},{"id":"https://openalex.org/C154945302","wikidata":"https://www.wikidata.org/wiki/Q11660","display_name":"Artificial intelligence","level":1,"score":0.35194507241249084},{"id":"https://openalex.org/C124101348","wikidata":"https://www.wikidata.org/wiki/Q172491","display_name":"Data mining","level":1,"score":0.3498079776763916},{"id":"https://openalex.org/C119857082","wikidata":"https://www.wikidata.org/wiki/Q2539","display_name":"Machine learning","level":1,"score":0.2283315360546112},{"id":"https://openalex.org/C86803240","wikidata":"https://www.wikidata.org/wiki/Q420","display_name":"Biology","level":0,"score":0.20619916915893555},{"id":"https://openalex.org/C147483822","wikidata":"https://www.wikidata.org/wiki/Q103537","display_name":"Antigen","level":2,"score":0.10846814513206482},{"id":"https://openalex.org/C54355233","wikidata":"https://www.wikidata.org/wiki/Q7162","display_name":"Genetics","level":1,"score":0.0851932168006897},{"id":"https://openalex.org/C104317684","wikidata":"https://www.wikidata.org/wiki/Q7187","display_name":"Gene","level":2,"score":0.0}],"mesh":[{"descriptor_ui":"D000465","descriptor_name":"Algorithms","qualifier_ui":null,"qualifier_name":null,"is_major_topic":true},{"descriptor_ui":"D000465","descriptor_name":"Algorithms","qualifier_ui":null,"qualifier_name":null,"is_major_topic":true},{"descriptor_ui":"D000465","descriptor_name":"Algorithms","qualifier_ui":null,"qualifier_name":null,"is_major_topic":true},{"descriptor_ui":"D001499","descriptor_name":"Bayes Theorem","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D001499","descriptor_name":"Bayes Theorem","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D001499","descriptor_name":"Bayes Theorem","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D001665","descriptor_name":"Binding Sites","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D001665","descriptor_name":"Binding Sites","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D001665","descriptor_name":"Binding Sites","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D010455","descriptor_name":"Peptides","qualifier_ui":"Q000737","qualifier_name":"chemistry","is_major_topic":true},{"descriptor_ui":"D010455","descriptor_name":"Peptides","qualifier_ui":"Q000737","qualifier_name":"chemistry","is_major_topic":true},{"descriptor_ui":"D010455","descriptor_name":"Peptides","qualifier_ui":"Q000737","qualifier_name":"chemistry","is_major_topic":true},{"descriptor_ui":"D011485","descriptor_name":"Protein Binding","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D011485","descriptor_name":"Protein Binding","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D011485","descriptor_name":"Protein Binding","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D011506","descriptor_name":"Proteins","qualifier_ui":"Q000378","qualifier_name":"metabolism","is_major_topic":false},{"descriptor_ui":"D011506","descriptor_name":"Proteins","qualifier_ui":"Q000378","qualifier_name":"metabolism","is_major_topic":false},{"descriptor_ui":"D011506","descriptor_name":"Proteins","qualifier_ui":"Q000378","qualifier_name":"metabolism","is_major_topic":false}],"locations_count":3,"locations":[{"id":"doi:10.1093/bib/bbad208","is_oa":true,"landing_page_url":"https://doi.org/10.1093/bib/bbad208","pdf_url":"https://academic.oup.com/bib/article-pdf/24/4/bbad208/50917076/bbad208.pdf","source":{"id":"https://openalex.org/S91767247","display_name":"Briefings in Bioinformatics","issn_l":"1467-5463","issn":["1467-5463","1477-4054"],"is_oa":false,"is_in_doaj":true,"is_core":true,"host_organization":"https://openalex.org/P4310311648","host_organization_name":"Oxford University Press","host_organization_lineage":["https://openalex.org/P4310311648","https://openalex.org/P4310311647"],"host_organization_lineage_names":["Oxford University Press","University of Oxford"],"type":"journal"},"license":null,"license_id":null,"version":"publishedVersion","is_accepted":true,"is_published":true,"raw_source_name":"Briefings in Bioinformatics","raw_type":"journal-article"},{"id":"pmid:37279464","is_oa":false,"landing_page_url":"https://pubmed.ncbi.nlm.nih.gov/37279464","pdf_url":null,"source":{"id":"https://openalex.org/S4306525036","display_name":"PubMed","issn_l":null,"issn":null,"is_oa":false,"is_in_doaj":false,"is_core":false,"host_organization":"https://openalex.org/I1299303238","host_organization_name":"National Institutes of Health","host_organization_lineage":["https://openalex.org/I1299303238"],"host_organization_lineage_names":[],"type":"repository"},"license":null,"license_id":null,"version":"publishedVersion","is_accepted":true,"is_published":true,"raw_source_name":"Briefings in bioinformatics","raw_type":null},{"id":"pmh:oai:hub.hku.hk:10722/348712","is_oa":true,"landing_page_url":"https://hub.hku.hk/handle/10722/348712","pdf_url":null,"source":{"id":"https://openalex.org/S4377196271","display_name":"The HKU Scholars Hub (University of Hong Kong)","issn_l":null,"issn":null,"is_oa":false,"is_in_doaj":false,"is_core":false,"host_organization":"https://openalex.org/I889458895","host_organization_name":"University of Hong Kong","host_organization_lineage":["https://openalex.org/I889458895"],"host_organization_lineage_names":[],"type":"repository"},"license":"cc-by-nc-nd","license_id":"https://openalex.org/licenses/cc-by-nc-nd","version":"submittedVersion","is_accepted":false,"is_published":false,"raw_source_name":null,"raw_type":"Article"}],"best_oa_location":{"id":"doi:10.1093/bib/bbad208","is_oa":true,"landing_page_url":"https://doi.org/10.1093/bib/bbad208","pdf_url":"https://academic.oup.com/bib/article-pdf/24/4/bbad208/50917076/bbad208.pdf","source":{"id":"https://openalex.org/S91767247","display_name":"Briefings in Bioinformatics","issn_l":"1467-5463","issn":["1467-5463","1477-4054"],"is_oa":false,"is_in_doaj":true,"is_core":true,"host_organization":"https://openalex.org/P4310311648","host_organization_name":"Oxford University Press","host_organization_lineage":["https://openalex.org/P4310311648","https://openalex.org/P4310311647"],"host_organization_lineage_names":["Oxford University Press","University of Oxford"],"type":"journal"},"license":null,"license_id":null,"version":"publishedVersion","is_accepted":true,"is_published":true,"raw_source_name":"Briefings in Bioinformatics","raw_type":"journal-article"},"sustainable_development_goals":[],"awards":[{"id":"https://openalex.org/G1178480161","display_name":null,"funder_award_id":"COVID1903010","funder_id":"https://openalex.org/F4320323291","funder_display_name":"Food and Health Bureau"},{"id":"https://openalex.org/G324135610","display_name":null,"funder_award_id":"2018YFA0902701","funder_id":"https://openalex.org/F4320335777","funder_display_name":"National Key Research and Development Program of China"},{"id":"https://openalex.org/G4133620392","display_name":null,"funder_award_id":"2020B1212030004","funder_id":"https://openalex.org/F4320324202","funder_display_name":"Guangdong Science and Technology Department"},{"id":"https://openalex.org/G5075788835","display_name":"Preparing for COVID-19 upcoming challenges by clinical and virological investigations","funder_award_id":"COVID1903010","funder_id":"https://openalex.org/F4320335055","funder_display_name":"Health and Medical Research Fund"},{"id":"https://openalex.org/G5844253743","display_name":null,"funder_award_id":"T-11-709/21-N","funder_id":"https://openalex.org/F4320335055","funder_display_name":"Health and Medical Research Fund"},{"id":"https://openalex.org/G6662135534","display_name":null,"funder_award_id":"2021YFA0910700","funder_id":"https://openalex.org/F4320335777","funder_display_name":"National Key Research and Development Program of China"}],"funders":[{"id":"https://openalex.org/F4320322942","display_name":"Chinese University of Hong Kong","ror":"https://ror.org/00t33hh48"},{"id":"https://openalex.org/F4320323291","display_name":"Food and Health Bureau","ror":"https://ror.org/03qh32912"},{"id":"https://openalex.org/F4320324202","display_name":"Guangdong Science and Technology Department","ror":"https://ror.org/00tjzgn92"},{"id":"https://openalex.org/F4320335055","display_name":"Health and Medical Research Fund","ror":"https://ror.org/03qh32912"},{"id":"https://openalex.org/F4320335777","display_name":"National Key Research and Development Program of China","ror":null}],"has_content":{"pdf":true,"grobid_xml":true},"content_urls":{"pdf":"https://content.openalex.org/works/W4379598685.pdf","grobid_xml":"https://content.openalex.org/works/W4379598685.grobid-xml"},"referenced_works_count":39,"referenced_works":["https://openalex.org/W1019830208","https://openalex.org/W1520434148","https://openalex.org/W1592870802","https://openalex.org/W1709815505","https://openalex.org/W1839525253","https://openalex.org/W1982271112","https://openalex.org/W1998300401","https://openalex.org/W2033765726","https://openalex.org/W2073850887","https://openalex.org/W2077013196","https://openalex.org/W2084908610","https://openalex.org/W2103777723","https://openalex.org/W2120399005","https://openalex.org/W2123169315","https://openalex.org/W2137995988","https://openalex.org/W2271914738","https://openalex.org/W2597129987","https://openalex.org/W2737196618","https://openalex.org/W2777980778","https://openalex.org/W2898389621","https://openalex.org/W2918598256","https://openalex.org/W2943591933","https://openalex.org/W3018554363","https://openalex.org/W3024570138","https://openalex.org/W3042452836","https://openalex.org/W3042910002","https://openalex.org/W3090491025","https://openalex.org/W3121554924","https://openalex.org/W3127238141","https://openalex.org/W3130970563","https://openalex.org/W3139265997","https://openalex.org/W3166730506","https://openalex.org/W3182995521","https://openalex.org/W3183835519","https://openalex.org/W4225993814","https://openalex.org/W4226092482","https://openalex.org/W6635200387","https://openalex.org/W6669145357","https://openalex.org/W6762166224"],"related_works":["https://openalex.org/W2770593030","https://openalex.org/W4281727072","https://openalex.org/W2560201613","https://openalex.org/W3154990682","https://openalex.org/W2171975302","https://openalex.org/W2022352247","https://openalex.org/W1532073221","https://openalex.org/W2377538627","https://openalex.org/W2107220315","https://openalex.org/W1589637664"],"abstract_inverted_index":{"Major":[0],"histocompatibility":[1],"complex":[2],"(MHC)-peptide":[3],"binding":[4,25,42,57,61,83,100,118,122,132],"is":[5,88],"a":[6,11,45,48,89,107],"critical":[7],"step":[8],"in":[9,30],"enabling":[10,134],"peptide":[12,46],"to":[13,47,54,96,185],"serve":[14],"as":[15,73],"an":[16,92,98,138],"antigen":[17],"for":[18,40,91,141],"T-cell":[19],"recognition.":[20],"Accurate":[21],"prediction":[22],"of":[23,44,130,137,148,162,167,179],"this":[24,103],"can":[26],"facilitate":[27],"various":[28],"applications":[29],"immunotherapy.":[31],"While":[32],"many":[33],"existing":[34],"methods":[35],"offer":[36],"good":[37],"predictive":[38],"power":[39],"the":[41,56,117,121,127,131,146],"affinity":[43,119],"specific":[49],"MHC,":[50],"few":[51],"models":[52,64],"attempt":[53],"infer":[55],"threshold":[58,140],"that":[59,110],"distinguishes":[60],"sequences.":[62,169],"These":[63,170],"often":[65],"rely":[66],"on":[67],"experience-based":[68],"ad":[69],"hoc":[70],"criteria,":[71],"such":[72],"500":[74],"or":[75],"1000nM.":[76],"However,":[77],"different":[78,82,152],"MHCs":[79],"may":[80],"have":[81],"thresholds.":[84,193],"As":[85],"such,":[86],"there":[87],"need":[90],"automatic,":[93],"data-driven":[94],"method":[95,150],"determine":[97],"accurate":[99,135],"threshold.":[101,123],"In":[102],"study,":[104],"we":[105,154],"proposed":[106],"Bayesian":[108],"model":[109,125],"jointly":[111],"infers":[112],"core":[113],"locations":[114],"(binding":[115],"sites),":[116],"and":[120,165,177],"Our":[124],"provided":[126],"posterior":[128],"distribution":[129],"threshold,":[133],"determination":[136],"appropriate":[139],"each":[142],"MHC.":[143],"To":[144],"evaluate":[145],"performance":[147],"our":[149,180,188],"under":[151],"scenarios,":[153],"conducted":[155],"simulation":[156,171],"studies":[157,172],"with":[158],"varying":[159],"dominant":[160],"levels":[161],"motif":[163],"distributions":[164],"proportions":[166],"random":[168],"showed":[173],"desirable":[174],"estimation":[175],"accuracy":[176],"robustness":[178],"model.":[181],"Additionally,":[182],"when":[183],"applied":[184],"real":[186],"data,":[187],"results":[189],"outperformed":[190],"commonly":[191],"used":[192]},"counts_by_year":[{"year":2026,"cited_by_count":1},{"year":2025,"cited_by_count":4}],"updated_date":"2026-06-22T08:00:12.763002","created_date":"2025-10-10T00:00:00"}
