{"id":"https://openalex.org/W4367297900","doi":"https://doi.org/10.1093/bib/bbad161","title":"Multi-modality attribute learning-based method for drug\u2013protein interaction prediction based on deep neural network","display_name":"Multi-modality attribute learning-based method for drug\u2013protein interaction prediction based on deep neural network","publication_year":2023,"publication_date":"2023-04-27","ids":{"openalex":"https://openalex.org/W4367297900","doi":"https://doi.org/10.1093/bib/bbad161","pmid":"https://pubmed.ncbi.nlm.nih.gov/37114624"},"language":"en","primary_location":{"id":"doi:10.1093/bib/bbad161","is_oa":true,"landing_page_url":"https://doi.org/10.1093/bib/bbad161","pdf_url":"https://academic.oup.com/bib/article-pdf/24/3/bbad161/50411083/bbad161.pdf","source":{"id":"https://openalex.org/S91767247","display_name":"Briefings in Bioinformatics","issn_l":"1467-5463","issn":["1467-5463","1477-4054"],"is_oa":false,"is_in_doaj":true,"is_core":true,"host_organization":"https://openalex.org/P4310311648","host_organization_name":"Oxford University Press","host_organization_lineage":["https://openalex.org/P4310311648","https://openalex.org/P4310311647"],"host_organization_lineage_names":["Oxford University Press","University of Oxford"],"type":"journal"},"license":null,"license_id":null,"version":"publishedVersion","is_accepted":true,"is_published":true,"raw_source_name":"Briefings in Bioinformatics","raw_type":"journal-article"},"type":"article","indexed_in":["crossref","doaj","pubmed"],"open_access":{"is_oa":true,"oa_status":"bronze","oa_url":"https://academic.oup.com/bib/article-pdf/24/3/bbad161/50411083/bbad161.pdf","any_repository_has_fulltext":false},"authorships":[{"author_position":"first","author":{"id":"https://openalex.org/A5038137938","display_name":"Weihe Dong","orcid":"https://orcid.org/0000-0001-8022-9793"},"institutions":[{"id":"https://openalex.org/I47689461","display_name":"Northeast Forestry University","ror":"https://ror.org/02yxnh564","country_code":"CN","type":"education","lineage":["https://openalex.org/I47689461"]}],"countries":["CN"],"is_corresponding":false,"raw_author_name":"Weihe Dong","raw_affiliation_strings":["College of information and Computer Engineering, Northeast Forestry University , Hexing Road, 150040, Harbin , China"],"raw_orcid":null,"affiliations":[{"raw_affiliation_string":"College of information and Computer Engineering, Northeast Forestry University , Hexing Road, 150040, Harbin , China","institution_ids":["https://openalex.org/I47689461"]}]},{"author_position":"middle","author":{"id":"https://openalex.org/A5101648196","display_name":"Qiang Yang","orcid":"https://orcid.org/0000-0002-6524-9443"},"institutions":[{"id":"https://openalex.org/I1300757298","display_name":"Heilongjiang University of Science and Technology","ror":"https://ror.org/030xwyx96","country_code":"CN","type":"education","lineage":["https://openalex.org/I1300757298"]}],"countries":["CN"],"is_corresponding":false,"raw_author_name":"Qiang Yang","raw_affiliation_strings":["Postdoctoral Program of Heilongjiang Hengxun Technology Co., Ltd. , Xuefu Road, 150080, Harbin , China","School of Computer Science and Technology, Heilongjiang University , Xuefu Road, 150080, Harbin , China"],"raw_orcid":null,"affiliations":[{"raw_affiliation_string":"Postdoctoral Program of Heilongjiang Hengxun Technology Co., Ltd. , Xuefu Road, 150080, Harbin , China","institution_ids":[]},{"raw_affiliation_string":"School of Computer Science and Technology, Heilongjiang University , Xuefu Road, 150080, Harbin , China","institution_ids":["https://openalex.org/I1300757298"]}]},{"author_position":"middle","author":{"id":"https://openalex.org/A5100686671","display_name":"Jian Wang","orcid":"https://orcid.org/0000-0002-3106-5638"},"institutions":[{"id":"https://openalex.org/I47689461","display_name":"Northeast Forestry University","ror":"https://ror.org/02yxnh564","country_code":"CN","type":"education","lineage":["https://openalex.org/I47689461"]}],"countries":["CN"],"is_corresponding":false,"raw_author_name":"Jian Wang","raw_affiliation_strings":["College of information and Computer Engineering, Northeast Forestry University , Hexing Road, 150040, Harbin , China"],"raw_orcid":null,"affiliations":[{"raw_affiliation_string":"College of information and Computer Engineering, Northeast Forestry University , Hexing Road, 150040, Harbin , China","institution_ids":["https://openalex.org/I47689461"]}]},{"author_position":"middle","author":{"id":"https://openalex.org/A5100713766","display_name":"Long Xu","orcid":"https://orcid.org/0000-0003-4952-9178"},"institutions":[{"id":"https://openalex.org/I1300757298","display_name":"Heilongjiang University of Science and Technology","ror":"https://ror.org/030xwyx96","country_code":"CN","type":"education","lineage":["https://openalex.org/I1300757298"]}],"countries":["CN"],"is_corresponding":false,"raw_author_name":"Long Xu","raw_affiliation_strings":["Postdoctoral Program of Heilongjiang Hengxun Technology Co., Ltd. , Xuefu Road, 150080, Harbin , China","School of Computer Science and Technology, Heilongjiang University , Xuefu Road, 150080, Harbin , China"],"raw_orcid":null,"affiliations":[{"raw_affiliation_string":"Postdoctoral Program of Heilongjiang Hengxun Technology Co., Ltd. , Xuefu Road, 150080, Harbin , China","institution_ids":[]},{"raw_affiliation_string":"School of Computer Science and Technology, Heilongjiang University , Xuefu Road, 150080, Harbin , China","institution_ids":["https://openalex.org/I1300757298"]}]},{"author_position":"middle","author":{"id":"https://openalex.org/A5100628723","display_name":"Xiaokun Li","orcid":"https://orcid.org/0000-0002-6645-6890"},"institutions":[{"id":"https://openalex.org/I1300757298","display_name":"Heilongjiang University of Science and Technology","ror":"https://ror.org/030xwyx96","country_code":"CN","type":"education","lineage":["https://openalex.org/I1300757298"]}],"countries":["CN"],"is_corresponding":true,"raw_author_name":"Xiaokun Li","raw_affiliation_strings":["Postdoctoral Program of Heilongjiang Hengxun Technology Co., Ltd. , Xuefu Road, 150080, Harbin , China","School of Computer Science and Technology, Heilongjiang University , Xuefu Road, 150080, Harbin , China"],"raw_orcid":"https://orcid.org/0000-0002-6645-6890","affiliations":[{"raw_affiliation_string":"Postdoctoral Program of Heilongjiang Hengxun Technology Co., Ltd. , Xuefu Road, 150080, Harbin , China","institution_ids":[]},{"raw_affiliation_string":"School of Computer Science and Technology, Heilongjiang University , Xuefu Road, 150080, Harbin , China","institution_ids":["https://openalex.org/I1300757298"]}]},{"author_position":"middle","author":{"id":"https://openalex.org/A5091843570","display_name":"Gongning Luo","orcid":"https://orcid.org/0000-0003-3662-0335"},"institutions":[{"id":"https://openalex.org/I204983213","display_name":"Harbin Institute of Technology","ror":"https://ror.org/01yqg2h08","country_code":"CN","type":"education","lineage":["https://openalex.org/I204983213"]},{"id":"https://openalex.org/I71920554","display_name":"King Abdullah University of Science and Technology","ror":"https://ror.org/01q3tbs38","country_code":"SA","type":"education","lineage":["https://openalex.org/I71920554"]}],"countries":["CN","SA"],"is_corresponding":true,"raw_author_name":"Gongning Luo","raw_affiliation_strings":["Computer, Electrical and Mathematical Sciences & Engineering Division, King Abdullah University of Science and Technology , 4700 KAUST, Thuwal 23955 , Saudi Arabia","School of Computer Science and Technology, Harbin Institute of Technology , West Dazhi Street, 150001, Harbin , China"],"raw_orcid":null,"affiliations":[{"raw_affiliation_string":"Computer, Electrical and Mathematical Sciences & Engineering Division, King Abdullah University of Science and Technology , 4700 KAUST, Thuwal 23955 , Saudi Arabia","institution_ids":["https://openalex.org/I71920554"]},{"raw_affiliation_string":"School of Computer Science and Technology, Harbin Institute of Technology , West Dazhi Street, 150001, Harbin , China","institution_ids":["https://openalex.org/I204983213"]}]},{"author_position":"last","author":{"id":"https://openalex.org/A5109604102","display_name":"Xin Gao","orcid":null},"institutions":[{"id":"https://openalex.org/I71920554","display_name":"King Abdullah University of Science and Technology","ror":"https://ror.org/01q3tbs38","country_code":"SA","type":"education","lineage":["https://openalex.org/I71920554"]}],"countries":["SA"],"is_corresponding":false,"raw_author_name":"Xin Gao","raw_affiliation_strings":["Computer, Electrical and Mathematical Sciences & Engineering Division, King Abdullah University of Science and Technology , 4700 KAUST, Thuwal 23955 , Saudi Arabia"],"raw_orcid":"https://orcid.org/0000-0002-7108-0357","affiliations":[{"raw_affiliation_string":"Computer, Electrical and Mathematical Sciences & Engineering Division, King Abdullah University of Science and Technology , 4700 KAUST, Thuwal 23955 , Saudi Arabia","institution_ids":["https://openalex.org/I71920554"]}]}],"institutions":[],"countries_distinct_count":2,"institutions_distinct_count":4,"corresponding_author_ids":["https://openalex.org/A5091843570","https://openalex.org/A5100628723"],"corresponding_institution_ids":["https://openalex.org/I1300757298","https://openalex.org/I204983213","https://openalex.org/I71920554"],"apc_list":{"value":4011,"currency":"USD","value_usd":4011},"apc_paid":null,"fwci":5.5182,"has_fulltext":true,"cited_by_count":32,"citation_normalized_percentile":{"value":0.96658342,"is_in_top_1_percent":false,"is_in_top_10_percent":true},"cited_by_percentile_year":{"min":94,"max":99},"biblio":{"volume":"24","issue":"3","first_page":null,"last_page":null},"is_retracted":false,"is_paratext":false,"is_xpac":false,"primary_topic":{"id":"https://openalex.org/T10211","display_name":"Computational Drug Discovery Methods","score":1.0,"subfield":{"id":"https://openalex.org/subfields/1703","display_name":"Computational Theory and Mathematics"},"field":{"id":"https://openalex.org/fields/17","display_name":"Computer Science"},"domain":{"id":"https://openalex.org/domains/3","display_name":"Physical Sciences"}},"topics":[{"id":"https://openalex.org/T10211","display_name":"Computational Drug Discovery Methods","score":1.0,"subfield":{"id":"https://openalex.org/subfields/1703","display_name":"Computational Theory and Mathematics"},"field":{"id":"https://openalex.org/fields/17","display_name":"Computer Science"},"domain":{"id":"https://openalex.org/domains/3","display_name":"Physical Sciences"}},{"id":"https://openalex.org/T10252","display_name":"Microbial Natural Products and Biosynthesis","score":0.9857000112533569,"subfield":{"id":"https://openalex.org/subfields/2736","display_name":"Pharmacology"},"field":{"id":"https://openalex.org/fields/27","display_name":"Medicine"},"domain":{"id":"https://openalex.org/domains/4","display_name":"Health Sciences"}},{"id":"https://openalex.org/T10887","display_name":"Bioinformatics and Genomic Networks","score":0.9708999991416931,"subfield":{"id":"https://openalex.org/subfields/1312","display_name":"Molecular Biology"},"field":{"id":"https://openalex.org/fields/13","display_name":"Biochemistry, Genetics and Molecular Biology"},"domain":{"id":"https://openalex.org/domains/1","display_name":"Life Sciences"}}],"keywords":[{"id":"https://openalex.org/keywords/computer-science","display_name":"Computer science","score":0.7454456090927124},{"id":"https://openalex.org/keywords/artificial-intelligence","display_name":"Artificial intelligence","score":0.6062644720077515},{"id":"https://openalex.org/keywords/convolutional-neural-network","display_name":"Convolutional neural network","score":0.5693029761314392},{"id":"https://openalex.org/keywords/modality","display_name":"Modality (human\u2013computer interaction)","score":0.5635342001914978},{"id":"https://openalex.org/keywords/graph","display_name":"Graph","score":0.47408974170684814},{"id":"https://openalex.org/keywords/feature-learning","display_name":"Feature learning","score":0.4550051689147949},{"id":"https://openalex.org/keywords/representation","display_name":"Representation (politics)","score":0.45480555295944214},{"id":"https://openalex.org/keywords/deep-learning","display_name":"Deep learning","score":0.45124053955078125},{"id":"https://openalex.org/keywords/encode","display_name":"ENCODE","score":0.4497777819633484},{"id":"https://openalex.org/keywords/transformer","display_name":"Transformer","score":0.4486826956272125},{"id":"https://openalex.org/keywords/artificial-neural-network","display_name":"Artificial neural network","score":0.4477859437465668},{"id":"https://openalex.org/keywords/machine-learning","display_name":"Machine learning","score":0.43182986974716187},{"id":"https://openalex.org/keywords/pattern-recognition","display_name":"Pattern recognition (psychology)","score":0.35223376750946045},{"id":"https://openalex.org/keywords/theoretical-computer-science","display_name":"Theoretical computer science","score":0.25870439410209656},{"id":"https://openalex.org/keywords/chemistry","display_name":"Chemistry","score":0.10463729500770569}],"concepts":[{"id":"https://openalex.org/C41008148","wikidata":"https://www.wikidata.org/wiki/Q21198","display_name":"Computer science","level":0,"score":0.7454456090927124},{"id":"https://openalex.org/C154945302","wikidata":"https://www.wikidata.org/wiki/Q11660","display_name":"Artificial intelligence","level":1,"score":0.6062644720077515},{"id":"https://openalex.org/C81363708","wikidata":"https://www.wikidata.org/wiki/Q17084460","display_name":"Convolutional neural network","level":2,"score":0.5693029761314392},{"id":"https://openalex.org/C2780226545","wikidata":"https://www.wikidata.org/wiki/Q6888030","display_name":"Modality (human\u2013computer interaction)","level":2,"score":0.5635342001914978},{"id":"https://openalex.org/C132525143","wikidata":"https://www.wikidata.org/wiki/Q141488","display_name":"Graph","level":2,"score":0.47408974170684814},{"id":"https://openalex.org/C59404180","wikidata":"https://www.wikidata.org/wiki/Q17013334","display_name":"Feature learning","level":2,"score":0.4550051689147949},{"id":"https://openalex.org/C2776359362","wikidata":"https://www.wikidata.org/wiki/Q2145286","display_name":"Representation (politics)","level":3,"score":0.45480555295944214},{"id":"https://openalex.org/C108583219","wikidata":"https://www.wikidata.org/wiki/Q197536","display_name":"Deep learning","level":2,"score":0.45124053955078125},{"id":"https://openalex.org/C66746571","wikidata":"https://www.wikidata.org/wiki/Q1134833","display_name":"ENCODE","level":3,"score":0.4497777819633484},{"id":"https://openalex.org/C66322947","wikidata":"https://www.wikidata.org/wiki/Q11658","display_name":"Transformer","level":3,"score":0.4486826956272125},{"id":"https://openalex.org/C50644808","wikidata":"https://www.wikidata.org/wiki/Q192776","display_name":"Artificial neural network","level":2,"score":0.4477859437465668},{"id":"https://openalex.org/C119857082","wikidata":"https://www.wikidata.org/wiki/Q2539","display_name":"Machine learning","level":1,"score":0.43182986974716187},{"id":"https://openalex.org/C153180895","wikidata":"https://www.wikidata.org/wiki/Q7148389","display_name":"Pattern recognition (psychology)","level":2,"score":0.35223376750946045},{"id":"https://openalex.org/C80444323","wikidata":"https://www.wikidata.org/wiki/Q2878974","display_name":"Theoretical computer science","level":1,"score":0.25870439410209656},{"id":"https://openalex.org/C185592680","wikidata":"https://www.wikidata.org/wiki/Q2329","display_name":"Chemistry","level":0,"score":0.10463729500770569},{"id":"https://openalex.org/C94625758","wikidata":"https://www.wikidata.org/wiki/Q7163","display_name":"Politics","level":2,"score":0.0},{"id":"https://openalex.org/C17744445","wikidata":"https://www.wikidata.org/wiki/Q36442","display_name":"Political science","level":0,"score":0.0},{"id":"https://openalex.org/C165801399","wikidata":"https://www.wikidata.org/wiki/Q25428","display_name":"Voltage","level":2,"score":0.0},{"id":"https://openalex.org/C104317684","wikidata":"https://www.wikidata.org/wiki/Q7187","display_name":"Gene","level":2,"score":0.0},{"id":"https://openalex.org/C199539241","wikidata":"https://www.wikidata.org/wiki/Q7748","display_name":"Law","level":1,"score":0.0},{"id":"https://openalex.org/C62520636","wikidata":"https://www.wikidata.org/wiki/Q944","display_name":"Quantum mechanics","level":1,"score":0.0},{"id":"https://openalex.org/C55493867","wikidata":"https://www.wikidata.org/wiki/Q7094","display_name":"Biochemistry","level":1,"score":0.0},{"id":"https://openalex.org/C121332964","wikidata":"https://www.wikidata.org/wiki/Q413","display_name":"Physics","level":0,"score":0.0}],"mesh":[{"descriptor_ui":"D004347","descriptor_name":"Drug Interactions","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D004347","descriptor_name":"Drug Interactions","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D004347","descriptor_name":"Drug Interactions","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D006801","descriptor_name":"Humans","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D006801","descriptor_name":"Humans","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D006801","descriptor_name":"Humans","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D007858","descriptor_name":"Learning","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D007858","descriptor_name":"Learning","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D007858","descriptor_name":"Learning","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D016571","descriptor_name":"Neural Networks, Computer","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D016571","descriptor_name":"Neural Networks, Computer","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D016571","descriptor_name":"Neural Networks, Computer","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D055808","descriptor_name":"Drug Discovery","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D055808","descriptor_name":"Drug Discovery","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D055808","descriptor_name":"Drug Discovery","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D064420","descriptor_name":"Drug-Related Side Effects and Adverse Reactions","qualifier_ui":null,"qualifier_name":null,"is_major_topic":true},{"descriptor_ui":"D064420","descriptor_name":"Drug-Related Side Effects and Adverse Reactions","qualifier_ui":null,"qualifier_name":null,"is_major_topic":true},{"descriptor_ui":"D064420","descriptor_name":"Drug-Related Side Effects and Adverse Reactions","qualifier_ui":null,"qualifier_name":null,"is_major_topic":true}],"locations_count":3,"locations":[{"id":"doi:10.1093/bib/bbad161","is_oa":true,"landing_page_url":"https://doi.org/10.1093/bib/bbad161","pdf_url":"https://academic.oup.com/bib/article-pdf/24/3/bbad161/50411083/bbad161.pdf","source":{"id":"https://openalex.org/S91767247","display_name":"Briefings in Bioinformatics","issn_l":"1467-5463","issn":["1467-5463","1477-4054"],"is_oa":false,"is_in_doaj":true,"is_core":true,"host_organization":"https://openalex.org/P4310311648","host_organization_name":"Oxford University Press","host_organization_lineage":["https://openalex.org/P4310311648","https://openalex.org/P4310311647"],"host_organization_lineage_names":["Oxford University Press","University of Oxford"],"type":"journal"},"license":null,"license_id":null,"version":"publishedVersion","is_accepted":true,"is_published":true,"raw_source_name":"Briefings in Bioinformatics","raw_type":"journal-article"},{"id":"pmid:37114624","is_oa":false,"landing_page_url":"https://pubmed.ncbi.nlm.nih.gov/37114624","pdf_url":null,"source":{"id":"https://openalex.org/S4306525036","display_name":"PubMed","issn_l":null,"issn":null,"is_oa":false,"is_in_doaj":false,"is_core":false,"host_organization":"https://openalex.org/I1299303238","host_organization_name":"National Institutes of Health","host_organization_lineage":["https://openalex.org/I1299303238"],"host_organization_lineage_names":[],"type":"repository"},"license":null,"license_id":null,"version":"publishedVersion","is_accepted":true,"is_published":true,"raw_source_name":"Briefings in bioinformatics","raw_type":null},{"id":"pmh:oai:repository.kaust.edu.sa:10754/691362","is_oa":false,"landing_page_url":"http://hdl.handle.net/10754/691362","pdf_url":null,"source":{"id":"https://openalex.org/S4306401596","display_name":"King Abdullah University of Science and Technology Repository (King Abdullah University of Science and Technology)","issn_l":null,"issn":null,"is_oa":false,"is_in_doaj":false,"is_core":false,"host_organization":"https://openalex.org/I71920554","host_organization_name":"King Abdullah University of Science and Technology","host_organization_lineage":["https://openalex.org/I71920554"],"host_organization_lineage_names":[],"type":"repository"},"license":null,"license_id":null,"version":"submittedVersion","is_accepted":false,"is_published":false,"raw_source_name":"","raw_type":"Article"}],"best_oa_location":{"id":"doi:10.1093/bib/bbad161","is_oa":true,"landing_page_url":"https://doi.org/10.1093/bib/bbad161","pdf_url":"https://academic.oup.com/bib/article-pdf/24/3/bbad161/50411083/bbad161.pdf","source":{"id":"https://openalex.org/S91767247","display_name":"Briefings in Bioinformatics","issn_l":"1467-5463","issn":["1467-5463","1477-4054"],"is_oa":false,"is_in_doaj":true,"is_core":true,"host_organization":"https://openalex.org/P4310311648","host_organization_name":"Oxford University Press","host_organization_lineage":["https://openalex.org/P4310311648","https://openalex.org/P4310311647"],"host_organization_lineage_names":["Oxford University Press","University of Oxford"],"type":"journal"},"license":null,"license_id":null,"version":"publishedVersion","is_accepted":true,"is_published":true,"raw_source_name":"Briefings in Bioinformatics","raw_type":"journal-article"},"sustainable_development_goals":[],"awards":[{"id":"https://openalex.org/G1025311263","display_name":null,"funder_award_id":"61501132","funder_id":"https://openalex.org/F4320321543","funder_display_name":"China Postdoctoral Science Foundation"},{"id":"https://openalex.org/G1445374915","display_name":null,"funder_award_id":"62272135","funder_id":"https://openalex.org/F4320321001","funder_display_name":"National Natural Science Foundation of China"},{"id":"https://openalex.org/G2058729345","display_name":null,"funder_award_id":"FCC/1/1976-45-01","funder_id":"https://openalex.org/F4320322320","funder_display_name":"King Abdullah University of Science and Technology"},{"id":"https://openalex.org/G2988561098","display_name":null,"funder_award_id":"61501132","funder_id":"https://openalex.org/F4320321001","funder_display_name":"National Natural Science Foundation of China"},{"id":"https://openalex.org/G3334349523","display_name":null,"funder_award_id":"2019M650069","funder_id":"https://openalex.org/F4320321543","funder_display_name":"China Postdoctoral Science Foundation"},{"id":"https://openalex.org/G4778083117","display_name":null,"funder_award_id":"62001144","funder_id":"https://openalex.org/F4320321001","funder_display_name":"National Natural Science Foundation of China"},{"id":"https://openalex.org/G5289953175","display_name":null,"funder_award_id":"REI/1/5234-01-01","funder_id":"https://openalex.org/F4320322320","funder_display_name":"King Abdullah University of Science and Technology"},{"id":"https://openalex.org/G5839455898","display_name":"\u57fa\u4e8e\u591a\u6a21\u6001\u5173\u8054\u56fe\u6a21\u578b\u7684\u533b\u5b66\u5a92\u4f53\u6570\u636e\u6316\u6398\u5173\u952e\u6280\u672f\u7814\u7a76","funder_award_id":"61672181","funder_id":"https://openalex.org/F4320321001","funder_display_name":"National Natural Science Foundation of China"},{"id":"https://openalex.org/G5865128777","display_name":null,"funder_award_id":"LH2019A029","funder_id":"https://openalex.org/F4320323085","funder_display_name":"Natural Science Foundation of Heilongjiang Province"},{"id":"https://openalex.org/G6427316299","display_name":null,"funder_award_id":"81273649","funder_id":"https://openalex.org/F4320321001","funder_display_name":"National Natural Science Foundation of China"},{"id":"https://openalex.org/G7463416688","display_name":null,"funder_award_id":"LH2019F049","funder_id":"https://openalex.org/F4320323085","funder_display_name":"Natural Science Foundation of Heilongjiang Province"},{"id":"https://openalex.org/G8253667702","display_name":null,"funder_award_id":"FCC/1/1976-44-01","funder_id":"https://openalex.org/F4320322320","funder_display_name":"King Abdullah University of Science and Technology"}],"funders":[{"id":"https://openalex.org/F4320321001","display_name":"National Natural Science Foundation of China","ror":"https://ror.org/01h0zpd94"},{"id":"https://openalex.org/F4320321543","display_name":"China Postdoctoral Science Foundation","ror":"https://ror.org/0426zh255"},{"id":"https://openalex.org/F4320322320","display_name":"King Abdullah University of Science and Technology","ror":"https://ror.org/01q3tbs38"},{"id":"https://openalex.org/F4320322725","display_name":"China Scholarship Council","ror":"https://ror.org/04atp4p48"},{"id":"https://openalex.org/F4320323085","display_name":"Natural Science Foundation of Heilongjiang Province","ror":null}],"has_content":{"pdf":true,"grobid_xml":false},"content_urls":{"pdf":"https://content.openalex.org/works/W4367297900.pdf"},"referenced_works_count":56,"referenced_works":["https://openalex.org/W1263867514","https://openalex.org/W1968217711","https://openalex.org/W1968761064","https://openalex.org/W1991696252","https://openalex.org/W1998898494","https://openalex.org/W2014282717","https://openalex.org/W2018408116","https://openalex.org/W2062941476","https://openalex.org/W2086286404","https://openalex.org/W2094791588","https://openalex.org/W2096864392","https://openalex.org/W2122863289","https://openalex.org/W2124001239","https://openalex.org/W2127069089","https://openalex.org/W2142572836","https://openalex.org/W2153838454","https://openalex.org/W2155157373","https://openalex.org/W2162011385","https://openalex.org/W2165125496","https://openalex.org/W2177411254","https://openalex.org/W2256553158","https://openalex.org/W2336207313","https://openalex.org/W2472384656","https://openalex.org/W2605952223","https://openalex.org/W2729788619","https://openalex.org/W2753953057","https://openalex.org/W2767891136","https://openalex.org/W2776484474","https://openalex.org/W2785947426","https://openalex.org/W2793951981","https://openalex.org/W2888273069","https://openalex.org/W2966787092","https://openalex.org/W3008142620","https://openalex.org/W3018980093","https://openalex.org/W3020930839","https://openalex.org/W3021338900","https://openalex.org/W3028589594","https://openalex.org/W3096561213","https://openalex.org/W3126516421","https://openalex.org/W3155300875","https://openalex.org/W3156260318","https://openalex.org/W3161252167","https://openalex.org/W3166272013","https://openalex.org/W3184615727","https://openalex.org/W3211795435","https://openalex.org/W4200115265","https://openalex.org/W4206617747","https://openalex.org/W4226098493","https://openalex.org/W4282931170","https://openalex.org/W4284974145","https://openalex.org/W4285041843","https://openalex.org/W4301409532","https://openalex.org/W4385245566","https://openalex.org/W6736091738","https://openalex.org/W6739901393","https://openalex.org/W6767582755"],"related_works":["https://openalex.org/W2468279273","https://openalex.org/W2354198838","https://openalex.org/W1989130879","https://openalex.org/W2103419012","https://openalex.org/W2988126442","https://openalex.org/W1974414866","https://openalex.org/W2057568687","https://openalex.org/W2063982682","https://openalex.org/W2338543196","https://openalex.org/W1544691147"],"abstract_inverted_index":{"Identification":[0],"of":[1,28,48,54,78,159,175],"active":[2],"candidate":[3],"compounds":[4],"for":[5,84,97,206],"target":[6],"proteins,":[7,161],"also":[8],"called":[9],"drug-protein":[10],"interaction":[11,204],"(DPI)":[12],"prediction,":[13],"is":[14,58,80],"an":[15,81,91,121],"essential":[16],"but":[17],"time-consuming":[18],"and":[19,66,102,114,143,163,188,217],"expensive":[20],"step,":[21],"which":[22],"leads":[23],"to":[24,44,74,137,182,201],"fostering":[25],"the":[26,52,76,139,145,167,173,192,203,207,218,222],"development":[27],"drug":[29],"discovery.":[30],"In":[31,86],"recent":[32],"years,":[33],"deep":[34],"network-based":[35],"learning":[36,199],"methods":[37,57],"were":[38,118,170,195],"frequently":[39],"proposed":[40,223],"in":[41,186,213],"DPIs":[42,79,98,208],"due":[43],"their":[45],"powerful":[46],"capability":[47],"feature":[49],"representation.":[50],"However,":[51],"performance":[53,77,227],"existing":[55,229],"DPI":[56],"still":[59],"limited":[60],"by":[61,149],"insufficiently":[62],"labeled":[63],"pharmacological":[64],"data":[65],"neglected":[67],"intermolecular":[68,111],"information.":[69],"Therefore,":[70],"overcoming":[71],"these":[72],"difficulties":[73],"perfect":[75],"urgent":[82],"challenge":[83],"researchers.":[85],"this":[87],"article,":[88],"we":[89],"designed":[90],"innovative":[92],"'multi-modality":[93],"attributes'":[94],"learning-based":[95],"framework":[96],"with":[99,197],"molecular":[100,187],"transformer":[101,123],"graph":[103,130],"convolutional":[104,131],"networks,":[105],"termed,":[106],"multi-modality":[107],"attributes":[108],"(MMA)-DPI.":[109],"Specifically,":[110],"sub-structural":[112],"information":[113,142],"chemical":[115],"semantic":[116],"representations":[117,158,169,194],"extracted":[119],"through":[120],"augmented":[122],"module":[124,134,181],"from":[125],"biomedical":[126],"data.":[127],"A":[128],"tri-layer":[129],"neural":[132,179],"network":[133,153,180],"was":[135,211],"applied":[136],"associate":[138],"neighbor":[140],"topology":[141],"learn":[144],"condensed":[146],"dimensional":[147],"features":[148],"aggregating":[150],"a":[151,176],"heterogeneous":[152],"that":[154,221],"contains":[155],"multiple":[156],"biological":[157],"drugs,":[160],"diseases":[162],"side":[164],"effects.":[165],"Then,":[166],"learned":[168],"taken":[171],"as":[172],"input":[174],"fully":[177],"connected":[178],"further":[183],"integrate":[184],"them":[185],"topological":[189],"space.":[190],"Finally,":[191],"attribute":[193],"fused":[196],"adaptive":[198],"weights":[200],"calculate":[202],"score":[205],"tasks.":[209],"MMA-DPI":[210],"evaluated":[212],"different":[214],"experimental":[215],"conditions":[216],"results":[219],"demonstrate":[220],"method":[224],"achieved":[225],"higher":[226],"than":[228],"state-of-the-art":[230],"frameworks.":[231]},"counts_by_year":[{"year":2026,"cited_by_count":5},{"year":2025,"cited_by_count":12},{"year":2024,"cited_by_count":13},{"year":2023,"cited_by_count":2}],"updated_date":"2026-07-14T08:27:34.040176","created_date":"2023-04-29T00:00:00"}
