{"id":"https://openalex.org/W4360804057","doi":"https://doi.org/10.1093/bib/bbad107","title":"Analysis of super-enhancer using machine learning and its application to medical biology","display_name":"Analysis of super-enhancer using machine learning and its application to medical biology","publication_year":2023,"publication_date":"2023-03-23","ids":{"openalex":"https://openalex.org/W4360804057","doi":"https://doi.org/10.1093/bib/bbad107","pmid":"https://pubmed.ncbi.nlm.nih.gov/36960780"},"language":"en","primary_location":{"id":"doi:10.1093/bib/bbad107","is_oa":true,"landing_page_url":"https://doi.org/10.1093/bib/bbad107","pdf_url":"https://academic.oup.com/bib/article-pdf/24/3/bbad107/50410756/bbad107.pdf","source":{"id":"https://openalex.org/S91767247","display_name":"Briefings in Bioinformatics","issn_l":"1467-5463","issn":["1467-5463","1477-4054"],"is_oa":false,"is_in_doaj":true,"is_core":true,"host_organization":"https://openalex.org/P4310311648","host_organization_name":"Oxford University Press","host_organization_lineage":["https://openalex.org/P4310311648","https://openalex.org/P4310311647"],"host_organization_lineage_names":["Oxford University Press","University of Oxford"],"type":"journal"},"license":"cc-by","license_id":"https://openalex.org/licenses/cc-by","version":"publishedVersion","is_accepted":true,"is_published":true,"raw_source_name":"Briefings in Bioinformatics","raw_type":"journal-article"},"type":"review","indexed_in":["crossref","doaj","pubmed"],"open_access":{"is_oa":true,"oa_status":"hybrid","oa_url":"https://academic.oup.com/bib/article-pdf/24/3/bbad107/50410756/bbad107.pdf","any_repository_has_fulltext":true},"authorships":[{"author_position":"first","author":{"id":"https://openalex.org/A5011852177","display_name":"Ryuji Hamamoto","orcid":"https://orcid.org/0000-0002-2632-1334"},"institutions":[{"id":"https://openalex.org/I4210126580","display_name":"RIKEN Center for Advanced Intelligence Project","ror":"https://ror.org/03ckxwf91","country_code":"JP","type":"facility","lineage":["https://openalex.org/I4210110652","https://openalex.org/I4210126580"]},{"id":"https://openalex.org/I54696188","display_name":"National Cancer Research Institute","ror":"https://ror.org/02mp0vf47","country_code":"GB","type":"facility","lineage":["https://openalex.org/I54696188"]},{"id":"https://openalex.org/I125602781","display_name":"Tokyo Medical and Dental University","ror":"https://ror.org/051k3eh31","country_code":"JP","type":"education","lineage":["https://openalex.org/I125602781"]}],"countries":["GB","JP"],"is_corresponding":true,"raw_author_name":"Ryuji Hamamoto","raw_affiliation_strings":["Division Chief in the Division of Medical AI Research and Development, National Cancer Center Research Institute; a Professor in the Department of NCC Cancer Science, Graduate School of Medical and Dental Sciences, Tokyo Medical and Dental University and a Team Leader of the Cancer Translational Research Team, RIKEN Center for Advanced Intelligence Project","Division Chief in the Division of Medical AI Research and Development, National Cancer Center Research Institute"],"affiliations":[{"raw_affiliation_string":"Division Chief in the Division of Medical AI Research and Development, National Cancer Center Research Institute; a Professor in the Department of NCC Cancer Science, Graduate School of Medical and Dental Sciences, Tokyo Medical and Dental University and a Team Leader of the Cancer Translational Research Team, RIKEN Center for Advanced Intelligence Project","institution_ids":["https://openalex.org/I4210126580","https://openalex.org/I125602781"]},{"raw_affiliation_string":"Division Chief in the Division of Medical AI Research and Development, National Cancer Center Research Institute","institution_ids":["https://openalex.org/I54696188"]}]},{"author_position":"middle","author":{"id":"https://openalex.org/A5090831621","display_name":"Ken Takasawa","orcid":"https://orcid.org/0000-0001-8699-0858"},"institutions":[{"id":"https://openalex.org/I4210126580","display_name":"RIKEN Center for Advanced Intelligence Project","ror":"https://ror.org/03ckxwf91","country_code":"JP","type":"facility","lineage":["https://openalex.org/I4210110652","https://openalex.org/I4210126580"]}],"countries":["JP"],"is_corresponding":false,"raw_author_name":"Ken Takasawa","raw_affiliation_strings":["Cancer Translational Research Team, RIKEN Center for Advanced Intelligence Project and an External Research Staff in the Medical AI Research and Development, National Cancer Center Research Institute"],"affiliations":[{"raw_affiliation_string":"Cancer Translational Research Team, RIKEN Center for Advanced Intelligence Project and an External Research Staff in the Medical AI Research and Development, National Cancer Center Research Institute","institution_ids":["https://openalex.org/I4210126580"]}]},{"author_position":"middle","author":{"id":"https://openalex.org/A5020057840","display_name":"Norio Shinkai","orcid":"https://orcid.org/0000-0001-7998-8493"},"institutions":[{"id":"https://openalex.org/I125602781","display_name":"Tokyo Medical and Dental University","ror":"https://ror.org/051k3eh31","country_code":"JP","type":"education","lineage":["https://openalex.org/I125602781"]}],"countries":["JP"],"is_corresponding":false,"raw_author_name":"Norio Shinkai","raw_affiliation_strings":["Department of NCC Cancer Science, Graduate School of Medical and Dental Sciences, Tokyo Medical and Dental University"],"affiliations":[{"raw_affiliation_string":"Department of NCC Cancer Science, Graduate School of Medical and Dental Sciences, Tokyo Medical and Dental University","institution_ids":["https://openalex.org/I125602781"]}]},{"author_position":"middle","author":{"id":"https://openalex.org/A5087732261","display_name":"Hidenori Machino","orcid":"https://orcid.org/0000-0001-6843-7696"},"institutions":[{"id":"https://openalex.org/I4210126580","display_name":"RIKEN Center for Advanced Intelligence Project","ror":"https://ror.org/03ckxwf91","country_code":"JP","type":"facility","lineage":["https://openalex.org/I4210110652","https://openalex.org/I4210126580"]}],"countries":["JP"],"is_corresponding":false,"raw_author_name":"Hidenori Machino","raw_affiliation_strings":["Cancer Translational Research Team, RIKEN Center for Advanced Intelligence Project and an External Research Staff in the Medical AI Research and Development, National Cancer Center Research Institute"],"affiliations":[{"raw_affiliation_string":"Cancer Translational Research Team, RIKEN Center for Advanced Intelligence Project and an External Research Staff in the Medical AI Research and Development, National Cancer Center Research Institute","institution_ids":["https://openalex.org/I4210126580"]}]},{"author_position":"middle","author":{"id":"https://openalex.org/A5019504867","display_name":"Nobuji Kouno","orcid":null},"institutions":[{"id":"https://openalex.org/I22299242","display_name":"Kyoto University","ror":"https://ror.org/02kpeqv85","country_code":"JP","type":"education","lineage":["https://openalex.org/I22299242"]}],"countries":["JP"],"is_corresponding":false,"raw_author_name":"Nobuji Kouno","raw_affiliation_strings":["Department of Surgery, Graduate School of Medicine, Kyoto University"],"affiliations":[{"raw_affiliation_string":"Department of Surgery, Graduate School of Medicine, Kyoto University","institution_ids":["https://openalex.org/I22299242"]}]},{"author_position":"middle","author":{"id":"https://openalex.org/A5062170991","display_name":"Ken Asada","orcid":"https://orcid.org/0000-0003-0548-4449"},"institutions":[{"id":"https://openalex.org/I4210126580","display_name":"RIKEN Center for Advanced Intelligence Project","ror":"https://ror.org/03ckxwf91","country_code":"JP","type":"facility","lineage":["https://openalex.org/I4210110652","https://openalex.org/I4210126580"]}],"countries":["JP"],"is_corresponding":false,"raw_author_name":"Ken Asada","raw_affiliation_strings":["Cancer Translational Research Team, RIKEN Center for Advanced Intelligence Project and an External Research Staff of Medical AI Research and Development, National Cancer Center Research Institute"],"affiliations":[{"raw_affiliation_string":"Cancer Translational Research Team, RIKEN Center for Advanced Intelligence Project and an External Research Staff of Medical AI Research and Development, National Cancer Center Research Institute","institution_ids":["https://openalex.org/I4210126580"]}]},{"author_position":"middle","author":{"id":"https://openalex.org/A5101444168","display_name":"Masaaki Komatsu","orcid":"https://orcid.org/0000-0003-0421-8085"},"institutions":[{"id":"https://openalex.org/I4210126580","display_name":"RIKEN Center for Advanced Intelligence Project","ror":"https://ror.org/03ckxwf91","country_code":"JP","type":"facility","lineage":["https://openalex.org/I4210110652","https://openalex.org/I4210126580"]}],"countries":["JP"],"is_corresponding":false,"raw_author_name":"Masaaki Komatsu","raw_affiliation_strings":["Cancer Translational Research Team, RIKEN Center for Advanced Intelligence Project and an External Research Staff of Medical AI Research and Development, National Cancer Center Research Institute"],"affiliations":[{"raw_affiliation_string":"Cancer Translational Research Team, RIKEN Center for Advanced Intelligence Project and an External Research Staff of Medical AI Research and Development, National Cancer Center Research Institute","institution_ids":["https://openalex.org/I4210126580"]}]},{"author_position":"last","author":{"id":"https://openalex.org/A5057196702","display_name":"Syuzo Kaneko","orcid":"https://orcid.org/0000-0003-4558-9800"},"institutions":[{"id":"https://openalex.org/I4210126580","display_name":"RIKEN Center for Advanced Intelligence Project","ror":"https://ror.org/03ckxwf91","country_code":"JP","type":"facility","lineage":["https://openalex.org/I4210110652","https://openalex.org/I4210126580"]}],"countries":["JP"],"is_corresponding":false,"raw_author_name":"Syuzo Kaneko","raw_affiliation_strings":["Division of Medical AI Research and Development, National Cancer Center Research Institute and a Visiting Scientist in the Cancer Translational Research Team, RIKEN Center for Advanced Intelligence Project"],"affiliations":[{"raw_affiliation_string":"Division of Medical AI Research and Development, National Cancer Center Research Institute and a Visiting Scientist in the Cancer Translational Research Team, RIKEN Center for Advanced Intelligence Project","institution_ids":["https://openalex.org/I4210126580"]}]}],"institutions":[],"countries_distinct_count":2,"institutions_distinct_count":8,"corresponding_author_ids":["https://openalex.org/A5011852177"],"corresponding_institution_ids":["https://openalex.org/I125602781","https://openalex.org/I4210126580","https://openalex.org/I54696188"],"apc_list":{"value":4011,"currency":"USD","value_usd":4011},"apc_paid":{"value":4011,"currency":"USD","value_usd":4011},"fwci":5.9642,"has_fulltext":true,"cited_by_count":24,"citation_normalized_percentile":{"value":0.96834387,"is_in_top_1_percent":false,"is_in_top_10_percent":true},"cited_by_percentile_year":{"min":98,"max":99},"biblio":{"volume":"24","issue":"3","first_page":null,"last_page":null},"is_retracted":false,"is_paratext":false,"is_xpac":false,"primary_topic":{"id":"https://openalex.org/T10222","display_name":"Genomics and Chromatin Dynamics","score":0.9998999834060669,"subfield":{"id":"https://openalex.org/subfields/1312","display_name":"Molecular Biology"},"field":{"id":"https://openalex.org/fields/13","display_name":"Biochemistry, Genetics and Molecular Biology"},"domain":{"id":"https://openalex.org/domains/1","display_name":"Life Sciences"}},"topics":[{"id":"https://openalex.org/T10222","display_name":"Genomics and Chromatin Dynamics","score":0.9998999834060669,"subfield":{"id":"https://openalex.org/subfields/1312","display_name":"Molecular Biology"},"field":{"id":"https://openalex.org/fields/13","display_name":"Biochemistry, Genetics and Molecular Biology"},"domain":{"id":"https://openalex.org/domains/1","display_name":"Life Sciences"}},{"id":"https://openalex.org/T10885","display_name":"Gene expression and cancer classification","score":0.9987000226974487,"subfield":{"id":"https://openalex.org/subfields/1312","display_name":"Molecular Biology"},"field":{"id":"https://openalex.org/fields/13","display_name":"Biochemistry, Genetics and Molecular Biology"},"domain":{"id":"https://openalex.org/domains/1","display_name":"Life Sciences"}},{"id":"https://openalex.org/T12254","display_name":"Machine Learning in Bioinformatics","score":0.9980999827384949,"subfield":{"id":"https://openalex.org/subfields/1312","display_name":"Molecular Biology"},"field":{"id":"https://openalex.org/fields/13","display_name":"Biochemistry, Genetics and Molecular Biology"},"domain":{"id":"https://openalex.org/domains/1","display_name":"Life Sciences"}}],"keywords":[{"id":"https://openalex.org/keywords/machine-learning","display_name":"Machine learning","score":0.7022002935409546},{"id":"https://openalex.org/keywords/benchmark","display_name":"Benchmark (surveying)","score":0.6745346784591675},{"id":"https://openalex.org/keywords/computer-science","display_name":"Computer science","score":0.6593077182769775},{"id":"https://openalex.org/keywords/artificial-intelligence","display_name":"Artificial intelligence","score":0.6380297541618347},{"id":"https://openalex.org/keywords/preprocessor","display_name":"Preprocessor","score":0.622698187828064},{"id":"https://openalex.org/keywords/field","display_name":"Field (mathematics)","score":0.43086984753608704}],"concepts":[{"id":"https://openalex.org/C119857082","wikidata":"https://www.wikidata.org/wiki/Q2539","display_name":"Machine learning","level":1,"score":0.7022002935409546},{"id":"https://openalex.org/C185798385","wikidata":"https://www.wikidata.org/wiki/Q1161707","display_name":"Benchmark (surveying)","level":2,"score":0.6745346784591675},{"id":"https://openalex.org/C41008148","wikidata":"https://www.wikidata.org/wiki/Q21198","display_name":"Computer science","level":0,"score":0.6593077182769775},{"id":"https://openalex.org/C154945302","wikidata":"https://www.wikidata.org/wiki/Q11660","display_name":"Artificial intelligence","level":1,"score":0.6380297541618347},{"id":"https://openalex.org/C34736171","wikidata":"https://www.wikidata.org/wiki/Q918333","display_name":"Preprocessor","level":2,"score":0.622698187828064},{"id":"https://openalex.org/C9652623","wikidata":"https://www.wikidata.org/wiki/Q190109","display_name":"Field (mathematics)","level":2,"score":0.43086984753608704},{"id":"https://openalex.org/C33923547","wikidata":"https://www.wikidata.org/wiki/Q395","display_name":"Mathematics","level":0,"score":0.0},{"id":"https://openalex.org/C205649164","wikidata":"https://www.wikidata.org/wiki/Q1071","display_name":"Geography","level":0,"score":0.0},{"id":"https://openalex.org/C13280743","wikidata":"https://www.wikidata.org/wiki/Q131089","display_name":"Geodesy","level":1,"score":0.0},{"id":"https://openalex.org/C202444582","wikidata":"https://www.wikidata.org/wiki/Q837863","display_name":"Pure mathematics","level":1,"score":0.0}],"mesh":[{"descriptor_ui":"D000069550","descriptor_name":"Machine Learning","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D000069550","descriptor_name":"Machine Learning","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D000069550","descriptor_name":"Machine Learning","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D000465","descriptor_name":"Algorithms","qualifier_ui":null,"qualifier_name":null,"is_major_topic":true},{"descriptor_ui":"D000465","descriptor_name":"Algorithms","qualifier_ui":null,"qualifier_name":null,"is_major_topic":true},{"descriptor_ui":"D000465","descriptor_name":"Algorithms","qualifier_ui":null,"qualifier_name":null,"is_major_topic":true},{"descriptor_ui":"D001185","descriptor_name":"Artificial Intelligence","qualifier_ui":null,"qualifier_name":null,"is_major_topic":true},{"descriptor_ui":"D001185","descriptor_name":"Artificial Intelligence","qualifier_ui":null,"qualifier_name":null,"is_major_topic":true},{"descriptor_ui":"D001185","descriptor_name":"Artificial Intelligence","qualifier_ui":null,"qualifier_name":null,"is_major_topic":true},{"descriptor_ui":"D004742","descriptor_name":"Enhancer Elements, Genetic","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D004742","descriptor_name":"Enhancer Elements, Genetic","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D004742","descriptor_name":"Enhancer Elements, Genetic","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D023281","descriptor_name":"Genomics","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D023281","descriptor_name":"Genomics","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D023281","descriptor_name":"Genomics","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false}],"locations_count":3,"locations":[{"id":"doi:10.1093/bib/bbad107","is_oa":true,"landing_page_url":"https://doi.org/10.1093/bib/bbad107","pdf_url":"https://academic.oup.com/bib/article-pdf/24/3/bbad107/50410756/bbad107.pdf","source":{"id":"https://openalex.org/S91767247","display_name":"Briefings in Bioinformatics","issn_l":"1467-5463","issn":["1467-5463","1477-4054"],"is_oa":false,"is_in_doaj":true,"is_core":true,"host_organization":"https://openalex.org/P4310311648","host_organization_name":"Oxford University Press","host_organization_lineage":["https://openalex.org/P4310311648","https://openalex.org/P4310311647"],"host_organization_lineage_names":["Oxford University Press","University of Oxford"],"type":"journal"},"license":"cc-by","license_id":"https://openalex.org/licenses/cc-by","version":"publishedVersion","is_accepted":true,"is_published":true,"raw_source_name":"Briefings in Bioinformatics","raw_type":"journal-article"},{"id":"pmid:36960780","is_oa":false,"landing_page_url":"https://pubmed.ncbi.nlm.nih.gov/36960780","pdf_url":null,"source":{"id":"https://openalex.org/S4306525036","display_name":"PubMed","issn_l":null,"issn":null,"is_oa":false,"is_in_doaj":false,"is_core":false,"host_organization":"https://openalex.org/I1299303238","host_organization_name":"National Institutes of Health","host_organization_lineage":["https://openalex.org/I1299303238"],"host_organization_lineage_names":[],"type":"repository"},"license":null,"license_id":null,"version":"publishedVersion","is_accepted":true,"is_published":true,"raw_source_name":"Briefings in bioinformatics","raw_type":null},{"id":"pmh:oai:pubmedcentral.nih.gov:10199775","is_oa":true,"landing_page_url":"https://www.ncbi.nlm.nih.gov/pmc/articles/10199775","pdf_url":"https://pmc.ncbi.nlm.nih.gov/articles/PMC10199775/pdf/bbad107.pdf","source":{"id":"https://openalex.org/S2764455111","display_name":"PubMed Central","issn_l":null,"issn":null,"is_oa":false,"is_in_doaj":false,"is_core":false,"host_organization":"https://openalex.org/I1299303238","host_organization_name":"National Institutes of Health","host_organization_lineage":["https://openalex.org/I1299303238"],"host_organization_lineage_names":[],"type":"repository"},"license":"cc-by","license_id":"https://openalex.org/licenses/cc-by","version":"submittedVersion","is_accepted":false,"is_published":false,"raw_source_name":"Brief Bioinform","raw_type":"Text"}],"best_oa_location":{"id":"doi:10.1093/bib/bbad107","is_oa":true,"landing_page_url":"https://doi.org/10.1093/bib/bbad107","pdf_url":"https://academic.oup.com/bib/article-pdf/24/3/bbad107/50410756/bbad107.pdf","source":{"id":"https://openalex.org/S91767247","display_name":"Briefings in Bioinformatics","issn_l":"1467-5463","issn":["1467-5463","1477-4054"],"is_oa":false,"is_in_doaj":true,"is_core":true,"host_organization":"https://openalex.org/P4310311648","host_organization_name":"Oxford University Press","host_organization_lineage":["https://openalex.org/P4310311648","https://openalex.org/P4310311647"],"host_organization_lineage_names":["Oxford University Press","University of Oxford"],"type":"journal"},"license":"cc-by","license_id":"https://openalex.org/licenses/cc-by","version":"publishedVersion","is_accepted":true,"is_published":true,"raw_source_name":"Briefings in Bioinformatics","raw_type":"journal-article"},"sustainable_development_goals":[],"awards":[],"funders":[{"id":"https://openalex.org/F4320335125","display_name":"RIKEN","ror":"https://ror.org/01sjwvz98"}],"has_content":{"grobid_xml":false,"pdf":true},"content_urls":{"pdf":"https://content.openalex.org/works/W4360804057.pdf"},"referenced_works_count":161,"referenced_works":["https://openalex.org/W1544419537","https://openalex.org/W1781764024","https://openalex.org/W1881704573","https://openalex.org/W1969466735","https://openalex.org/W1971578941","https://openalex.org/W1973796285","https://openalex.org/W1976526581","https://openalex.org/W1977855308","https://openalex.org/W1997134098","https://openalex.org/W2004966039","https://openalex.org/W2009775937","https://openalex.org/W2014677321","https://openalex.org/W2016015848","https://openalex.org/W2016060560","https://openalex.org/W2024841357","https://openalex.org/W2026347115","https://openalex.org/W2036362847","https://openalex.org/W2043848913","https://openalex.org/W2060484997","https://openalex.org/W2066104717","https://openalex.org/W2070021921","https://openalex.org/W2072684537","https://openalex.org/W2073700708","https://openalex.org/W2080567269","https://openalex.org/W2082891611","https://openalex.org/W2086425717","https://openalex.org/W2086632167","https://openalex.org/W2095841868","https://openalex.org/W2106410630","https://openalex.org/W2107879261","https://openalex.org/W2118503070","https://openalex.org/W2121542842","https://openalex.org/W2122319990","https://openalex.org/W2123734813","https://openalex.org/W2124476261","https://openalex.org/W2128151873","https://openalex.org/W2129265683","https://openalex.org/W2132924928","https://openalex.org/W2134831355","https://openalex.org/W2138096293","https://openalex.org/W2146772089","https://openalex.org/W2147200519","https://openalex.org/W2148143831","https://openalex.org/W2149765709","https://openalex.org/W2150757282","https://openalex.org/W2161212572","https://openalex.org/W2170846478","https://openalex.org/W2171613528","https://openalex.org/W2176574121","https://openalex.org/W2178688380","https://openalex.org/W2192272998","https://openalex.org/W2224894504","https://openalex.org/W2270152626","https://openalex.org/W2344657883","https://openalex.org/W2345195116","https://openalex.org/W2383217883","https://openalex.org/W2469912802","https://openalex.org/W2472811390","https://openalex.org/W2507626327","https://openalex.org/W2514946118","https://openalex.org/W2526188806","https://openalex.org/W2547320292","https://openalex.org/W2580332642","https://openalex.org/W2593758470","https://openalex.org/W2594607611","https://openalex.org/W2594764564","https://openalex.org/W2607363971","https://openalex.org/W2612812586","https://openalex.org/W2616083932","https://openalex.org/W2757422579","https://openalex.org/W2758862582","https://openalex.org/W2793652131","https://openalex.org/W2798012365","https://openalex.org/W2800914998","https://openalex.org/W2802321540","https://openalex.org/W2806123558","https://openalex.org/W2806421539","https://openalex.org/W2807470300","https://openalex.org/W2808760515","https://openalex.org/W2883236285","https://openalex.org/W2885386724","https://openalex.org/W2888083925","https://openalex.org/W2889051002","https://openalex.org/W2895457169","https://openalex.org/W2896236534","https://openalex.org/W2898215009","https://openalex.org/W2898942820","https://openalex.org/W2899802902","https://openalex.org/W2911835695","https://openalex.org/W2913761875","https://openalex.org/W2919981059","https://openalex.org/W2921841818","https://openalex.org/W2943370629","https://openalex.org/W2947733174","https://openalex.org/W2952336494","https://openalex.org/W2952630532","https://openalex.org/W2965479255","https://openalex.org/W2979904523","https://openalex.org/W2981548686","https://openalex.org/W2983759518","https://openalex.org/W2997016650","https://openalex.org/W2997062412","https://openalex.org/W3001382656","https://openalex.org/W3005469082","https://openalex.org/W3011916641","https://openalex.org/W3013381886","https://openalex.org/W3013411594","https://openalex.org/W3018960895","https://openalex.org/W3023440167","https://openalex.org/W3037864910","https://openalex.org/W3045827876","https://openalex.org/W3049275773","https://openalex.org/W3081406991","https://openalex.org/W3082748165","https://openalex.org/W3086667591","https://openalex.org/W3091153836","https://openalex.org/W3095533610","https://openalex.org/W3104997875","https://openalex.org/W3110223342","https://openalex.org/W3110883886","https://openalex.org/W3118447692","https://openalex.org/W3119836372","https://openalex.org/W3123432883","https://openalex.org/W3124945471","https://openalex.org/W3127071755","https://openalex.org/W3135373303","https://openalex.org/W3139380709","https://openalex.org/W3152710649","https://openalex.org/W3156783185","https://openalex.org/W3157891465","https://openalex.org/W3158393751","https://openalex.org/W3162149025","https://openalex.org/W3163903715","https://openalex.org/W3175565632","https://openalex.org/W3197390426","https://openalex.org/W3197469870","https://openalex.org/W3207774560","https://openalex.org/W4200108213","https://openalex.org/W4200226212","https://openalex.org/W4205374539","https://openalex.org/W4205876996","https://openalex.org/W4214574368","https://openalex.org/W4229027554","https://openalex.org/W4231350130","https://openalex.org/W4283804602","https://openalex.org/W4283820836","https://openalex.org/W4285094511","https://openalex.org/W4292058616","https://openalex.org/W4295242280","https://openalex.org/W4298205574","https://openalex.org/W6739230558","https://openalex.org/W6752591255","https://openalex.org/W6753185613","https://openalex.org/W6760211984","https://openalex.org/W6763015868","https://openalex.org/W6770120275","https://openalex.org/W6781931679","https://openalex.org/W6795320674","https://openalex.org/W6797872122","https://openalex.org/W6809719992","https://openalex.org/W6811024555"],"related_works":["https://openalex.org/W1485630101","https://openalex.org/W2498017833","https://openalex.org/W2070338563","https://openalex.org/W2889453578","https://openalex.org/W4288754364","https://openalex.org/W4308734192","https://openalex.org/W4313524459","https://openalex.org/W4312831135","https://openalex.org/W3021152764","https://openalex.org/W4327738674"],"abstract_inverted_index":{"The":[0],"analysis":[1,41,46,106,129,136,153],"of":[2,14,37,42,55,102,122,127,147,151,157,180,205],"super-enhancers":[3],"(SEs)":[4],"has":[5,67],"recently":[6,68],"attracted":[7],"attention":[8],"in":[9,85,100,154],"elucidating":[10],"the":[11,35,40,118,125,148,155,163,171,178,189,194,200],"molecular":[12],"mechanisms":[13],"cancer":[15],"and":[16,28,44,120,124,134,174,183,202],"other":[17,48,138],"diseases.":[18],"SEs":[19,43,84],"are":[20,50,140],"genomic":[21,88],"structures":[22],"that":[23],"strongly":[24],"induce":[25],"gene":[26],"expression":[27],"have":[29],"been":[30],"reported":[31],"to":[32,34,70,80,87,96,142,176,187],"contribute":[33],"overexpression":[36],"oncogenes.":[38],"Because":[39],"integrated":[45,135],"with":[47,61,108,137],"data":[49,139,181],"performed":[51],"using":[52,130],"large":[53],"amounts":[54],"genome-wide":[56],"data,":[57],"artificial":[58],"intelligence":[59],"technology,":[60],"machine":[62,91,132,167],"learning":[63,92,133,168],"at":[64],"its":[65],"core,":[66],"begun":[69],"be":[71,97],"utilized.":[72],"In":[73,113],"promoting":[74],"precision":[75],"medicine,":[76],"it":[77],"is":[78,94],"important":[79],"consider":[81],"information":[82],"from":[83],"addition":[86],"data;":[89],"therefore,":[90],"technology":[93],"expected":[95],"introduced":[98],"appropriately":[99],"terms":[101],"building":[103],"a":[104,109,144],"robust":[105],"platform":[107],"high":[110],"generalization":[111],"performance.":[112],"this":[114],"review,":[115],"we":[116,161,198],"explain":[117],"history":[119],"principles":[121],"SE,":[123],"results":[126],"SE":[128,152,207],"state-of-the-art":[131],"presented":[141],"provide":[143],"comprehensive":[145],"understanding":[146],"current":[149,206],"status":[150],"field":[156],"medical":[158],"biology.":[159],"Additionally,":[160],"compared":[162],"accuracy":[164],"between":[165],"existing":[166,190],"methods":[169],"on":[170,193],"benchmark":[172,195],"dataset":[173],"attempted":[175],"explore":[177],"kind":[179],"preprocessing":[182],"integration":[184],"work":[185,192],"needed":[186],"make":[188],"algorithms":[191],"dataset.":[196],"Furthermore,":[197],"discuss":[199],"issues":[201],"future":[203],"directions":[204],"analysis.":[208]},"counts_by_year":[{"year":2025,"cited_by_count":10},{"year":2024,"cited_by_count":14}],"updated_date":"2026-03-14T08:43:22.919905","created_date":"2025-10-10T00:00:00"}
