{"id":"https://openalex.org/W4312114210","doi":"https://doi.org/10.1093/bib/bbac518","title":"DRONet: effectiveness-driven drug repositioning framework using network embedding and ranking learning","display_name":"DRONet: effectiveness-driven drug repositioning framework using network embedding and ranking learning","publication_year":2022,"publication_date":"2022-12-23","ids":{"openalex":"https://openalex.org/W4312114210","doi":"https://doi.org/10.1093/bib/bbac518","pmid":"https://pubmed.ncbi.nlm.nih.gov/36562715"},"language":"en","primary_location":{"id":"doi:10.1093/bib/bbac518","is_oa":true,"landing_page_url":"https://doi.org/10.1093/bib/bbac518","pdf_url":"https://academic.oup.com/bib/article-pdf/24/1/bbac518/48783033/bbac518.pdf","source":{"id":"https://openalex.org/S91767247","display_name":"Briefings in Bioinformatics","issn_l":"1467-5463","issn":["1467-5463","1477-4054"],"is_oa":false,"is_in_doaj":true,"is_core":true,"host_organization":"https://openalex.org/P4310311648","host_organization_name":"Oxford University Press","host_organization_lineage":["https://openalex.org/P4310311648","https://openalex.org/P4310311647"],"host_organization_lineage_names":["Oxford University Press","University of Oxford"],"type":"journal"},"license":null,"license_id":null,"version":"publishedVersion","is_accepted":true,"is_published":true,"raw_source_name":"Briefings in Bioinformatics","raw_type":"journal-article"},"type":"article","indexed_in":["crossref","doaj","pubmed"],"open_access":{"is_oa":true,"oa_status":"bronze","oa_url":"https://academic.oup.com/bib/article-pdf/24/1/bbac518/48783033/bbac518.pdf","any_repository_has_fulltext":false},"authorships":[{"author_position":"first","author":{"id":"https://openalex.org/A5051184139","display_name":"Kuo Yang","orcid":"https://orcid.org/0000-0003-0736-4512"},"institutions":[{"id":"https://openalex.org/I21193070","display_name":"Beijing Jiaotong University","ror":"https://ror.org/01yj56c84","country_code":"CN","type":"education","lineage":["https://openalex.org/I21193070"]}],"countries":["CN"],"is_corresponding":false,"raw_author_name":"Kuo Yang","raw_affiliation_strings":["Institute of Medical Intelligence, Beijing Key Lab of Traffic Data Analysis and Mining, School of Computer and Information Technology, Beijing Jiaotong University , China"],"raw_orcid":null,"affiliations":[{"raw_affiliation_string":"Institute of Medical Intelligence, Beijing Key Lab of Traffic Data Analysis and Mining, School of Computer and Information Technology, Beijing Jiaotong University , China","institution_ids":["https://openalex.org/I21193070"]}]},{"author_position":"middle","author":{"id":"https://openalex.org/A5102662317","display_name":"Yuxia Yang","orcid":null},"institutions":[{"id":"https://openalex.org/I21193070","display_name":"Beijing Jiaotong University","ror":"https://ror.org/01yj56c84","country_code":"CN","type":"education","lineage":["https://openalex.org/I21193070"]}],"countries":["CN"],"is_corresponding":false,"raw_author_name":"Yuxia Yang","raw_affiliation_strings":["Beijing Jiaotong University , China"],"raw_orcid":null,"affiliations":[{"raw_affiliation_string":"Beijing Jiaotong University , China","institution_ids":["https://openalex.org/I21193070"]}]},{"author_position":"middle","author":{"id":"https://openalex.org/A5101040420","display_name":"Shuyue Fan","orcid":"https://orcid.org/0000-0003-1258-4130"},"institutions":[{"id":"https://openalex.org/I21193070","display_name":"Beijing Jiaotong University","ror":"https://ror.org/01yj56c84","country_code":"CN","type":"education","lineage":["https://openalex.org/I21193070"]}],"countries":["CN"],"is_corresponding":false,"raw_author_name":"Shuyue Fan","raw_affiliation_strings":["Beijing Key Lab of Traffic Data Analysis and Mining, School of Computer and Information Technology, Beijing Jiaotong University , China"],"raw_orcid":null,"affiliations":[{"raw_affiliation_string":"Beijing Key Lab of Traffic Data Analysis and Mining, School of Computer and Information Technology, Beijing Jiaotong University , China","institution_ids":["https://openalex.org/I21193070"]}]},{"author_position":"middle","author":{"id":"https://openalex.org/A5102006460","display_name":"Jianan Xia","orcid":"https://orcid.org/0000-0002-4219-0602"},"institutions":[{"id":"https://openalex.org/I21193070","display_name":"Beijing Jiaotong University","ror":"https://ror.org/01yj56c84","country_code":"CN","type":"education","lineage":["https://openalex.org/I21193070"]}],"countries":["CN"],"is_corresponding":false,"raw_author_name":"Jianan Xia","raw_affiliation_strings":["Institute of Medical Intelligence, Beijing Key Lab of Traffic Data Analysis and Mining, School of Computer and Information Technology, Beijing Jiaotong University , China"],"raw_orcid":null,"affiliations":[{"raw_affiliation_string":"Institute of Medical Intelligence, Beijing Key Lab of Traffic Data Analysis and Mining, School of Computer and Information Technology, Beijing Jiaotong University , China","institution_ids":["https://openalex.org/I21193070"]}]},{"author_position":"middle","author":{"id":"https://openalex.org/A5006300654","display_name":"Qiguang Zheng","orcid":"https://orcid.org/0000-0002-8145-2273"},"institutions":[{"id":"https://openalex.org/I21193070","display_name":"Beijing Jiaotong University","ror":"https://ror.org/01yj56c84","country_code":"CN","type":"education","lineage":["https://openalex.org/I21193070"]}],"countries":["CN"],"is_corresponding":false,"raw_author_name":"Qiguang Zheng","raw_affiliation_strings":["Beijing Key Lab of Traffic Data Analysis and Mining, School of Computer and Information Technology, Beijing Jiaotong University , China"],"raw_orcid":null,"affiliations":[{"raw_affiliation_string":"Beijing Key Lab of Traffic Data Analysis and Mining, School of Computer and Information Technology, Beijing Jiaotong University , China","institution_ids":["https://openalex.org/I21193070"]}]},{"author_position":"middle","author":{"id":"https://openalex.org/A5001402526","display_name":"Xin Luna Dong","orcid":"https://orcid.org/0009-0000-8667-322X"},"institutions":[{"id":"https://openalex.org/I21193070","display_name":"Beijing Jiaotong University","ror":"https://ror.org/01yj56c84","country_code":"CN","type":"education","lineage":["https://openalex.org/I21193070"]}],"countries":["CN"],"is_corresponding":false,"raw_author_name":"Xin Dong","raw_affiliation_strings":["Beijing Key Lab of Traffic Data Analysis and Mining, School of Computer and Information Technology, Beijing Jiaotong University , China"],"raw_orcid":null,"affiliations":[{"raw_affiliation_string":"Beijing Key Lab of Traffic Data Analysis and Mining, School of Computer and Information Technology, Beijing Jiaotong University , China","institution_ids":["https://openalex.org/I21193070"]}]},{"author_position":"middle","author":{"id":"https://openalex.org/A5100361661","display_name":"Jun Liu","orcid":"https://orcid.org/0000-0001-7161-0533"},"institutions":[{"id":"https://openalex.org/I4210141683","display_name":"China Academy of Chinese Medical Sciences","ror":"https://ror.org/042pgcv68","country_code":"CN","type":"education","lineage":["https://openalex.org/I4210141683"]}],"countries":["CN"],"is_corresponding":false,"raw_author_name":"Jun Liu","raw_affiliation_strings":["Institute of Basic Research in Clinical Medicine, China Academy of Chinese Medical Sciences , China"],"raw_orcid":null,"affiliations":[{"raw_affiliation_string":"Institute of Basic Research in Clinical Medicine, China Academy of Chinese Medical Sciences , China","institution_ids":["https://openalex.org/I4210141683"]}]},{"author_position":"middle","author":{"id":"https://openalex.org/A5100336299","display_name":"Qiong Liu","orcid":"https://orcid.org/0000-0001-9344-4193"},"institutions":[{"id":"https://openalex.org/I4210141683","display_name":"China Academy of Chinese Medical Sciences","ror":"https://ror.org/042pgcv68","country_code":"CN","type":"education","lineage":["https://openalex.org/I4210141683"]}],"countries":["CN"],"is_corresponding":false,"raw_author_name":"Qiong Liu","raw_affiliation_strings":["Institute of Basic Research in Clinical Medicine, China Academy of Chinese Medical Sciences , China"],"raw_orcid":null,"affiliations":[{"raw_affiliation_string":"Institute of Basic Research in Clinical Medicine, China Academy of Chinese Medical Sciences , China","institution_ids":["https://openalex.org/I4210141683"]}]},{"author_position":"middle","author":{"id":"https://openalex.org/A5100381349","display_name":"Lei Lei","orcid":"https://orcid.org/0000-0002-3366-1855"},"institutions":[{"id":"https://openalex.org/I4210141683","display_name":"China Academy of Chinese Medical Sciences","ror":"https://ror.org/042pgcv68","country_code":"CN","type":"education","lineage":["https://openalex.org/I4210141683"]}],"countries":["CN"],"is_corresponding":false,"raw_author_name":"Lei Lei","raw_affiliation_strings":["Institute of Information on Traditional Chinese Medicine, China Academy of Chinese Medical Sciences , China"],"raw_orcid":null,"affiliations":[{"raw_affiliation_string":"Institute of Information on Traditional Chinese Medicine, China Academy of Chinese Medical Sciences , China","institution_ids":["https://openalex.org/I4210141683"]}]},{"author_position":"middle","author":{"id":"https://openalex.org/A5100422732","display_name":"Yingying Zhang","orcid":"https://orcid.org/0000-0003-3769-079X"},"institutions":[{"id":"https://openalex.org/I4210121586","display_name":"Dongzhimen Hospital Affiliated to Beijing University of Chinese Medicine","ror":"https://ror.org/02yacz525","country_code":"CN","type":"healthcare","lineage":["https://openalex.org/I4210121586"]}],"countries":["CN"],"is_corresponding":false,"raw_author_name":"Yingying Zhang","raw_affiliation_strings":["Dongzhimen Hospital, Beijing University of Chinese Medicine , China"],"raw_orcid":null,"affiliations":[{"raw_affiliation_string":"Dongzhimen Hospital, Beijing University of Chinese Medicine , China","institution_ids":["https://openalex.org/I4210121586"]}]},{"author_position":"middle","author":{"id":"https://openalex.org/A5100451266","display_name":"Bing Li","orcid":"https://orcid.org/0000-0002-4613-1327"},"institutions":[{"id":"https://openalex.org/I4210141683","display_name":"China Academy of Chinese Medical Sciences","ror":"https://ror.org/042pgcv68","country_code":"CN","type":"education","lineage":["https://openalex.org/I4210141683"]}],"countries":["CN"],"is_corresponding":false,"raw_author_name":"Bing Li","raw_affiliation_strings":["Institute of Chinese Materia Medica, China Academy of Chinese Medical Sciences , China"],"raw_orcid":null,"affiliations":[{"raw_affiliation_string":"Institute of Chinese Materia Medica, China Academy of Chinese Medical Sciences , China","institution_ids":["https://openalex.org/I4210141683"]}]},{"author_position":"middle","author":{"id":"https://openalex.org/A5062246119","display_name":"Z Gao","orcid":"https://orcid.org/0000-0002-6255-141X"},"institutions":[{"id":"https://openalex.org/I4210127599","display_name":"Xiyuan Hospital","ror":"https://ror.org/02y0vze35","country_code":"CN","type":"healthcare","lineage":["https://openalex.org/I4210127599"]},{"id":"https://openalex.org/I4210141683","display_name":"China Academy of Chinese Medical Sciences","ror":"https://ror.org/042pgcv68","country_code":"CN","type":"education","lineage":["https://openalex.org/I4210141683"]}],"countries":["CN"],"is_corresponding":false,"raw_author_name":"Zhuye Gao","raw_affiliation_strings":["Xiyuan Hospital, China Academy of Chinese Medical Sciences, National Clinical Research Center for Chinese Medicine Cardiology , China"],"raw_orcid":null,"affiliations":[{"raw_affiliation_string":"Xiyuan Hospital, China Academy of Chinese Medical Sciences, National Clinical Research Center for Chinese Medicine Cardiology , China","institution_ids":["https://openalex.org/I4210127599","https://openalex.org/I4210141683"]}]},{"author_position":"middle","author":{"id":"https://openalex.org/A5012982867","display_name":"Runshun Zhang","orcid":"https://orcid.org/0000-0002-7127-8865"},"institutions":[{"id":"https://openalex.org/I4210141683","display_name":"China Academy of Chinese Medical Sciences","ror":"https://ror.org/042pgcv68","country_code":"CN","type":"education","lineage":["https://openalex.org/I4210141683"]},{"id":"https://openalex.org/I4210146387","display_name":"Guang\u2019anmen Hospital","ror":"https://ror.org/04gjmb875","country_code":"CN","type":"healthcare","lineage":["https://openalex.org/I4210146387"]}],"countries":["CN"],"is_corresponding":false,"raw_author_name":"Runshun Zhang","raw_affiliation_strings":["Guanganmen Hospital, China Academy of Chinese Medical Sciences , China"],"raw_orcid":null,"affiliations":[{"raw_affiliation_string":"Guanganmen Hospital, China Academy of Chinese Medical Sciences , China","institution_ids":["https://openalex.org/I4210146387","https://openalex.org/I4210141683"]}]},{"author_position":"middle","author":{"id":"https://openalex.org/A5073555542","display_name":"Baoyan Liu","orcid":"https://orcid.org/0000-0002-9677-5366"},"institutions":[{"id":"https://openalex.org/I4210141683","display_name":"China Academy of Chinese Medical Sciences","ror":"https://ror.org/042pgcv68","country_code":"CN","type":"education","lineage":["https://openalex.org/I4210141683"]}],"countries":["CN"],"is_corresponding":false,"raw_author_name":"Baoyan Liu","raw_affiliation_strings":["Data Center of Traditional Chinese Medicine, China Academy of Chinese Medical Sciences , China"],"raw_orcid":null,"affiliations":[{"raw_affiliation_string":"Data Center of Traditional Chinese Medicine, China Academy of Chinese Medical Sciences , China","institution_ids":["https://openalex.org/I4210141683"]}]},{"author_position":"middle","author":{"id":"https://openalex.org/A5100435291","display_name":"Zhong Wang","orcid":"https://orcid.org/0000-0003-0975-9251"},"institutions":[{"id":"https://openalex.org/I4210141683","display_name":"China Academy of Chinese Medical Sciences","ror":"https://ror.org/042pgcv68","country_code":"CN","type":"education","lineage":["https://openalex.org/I4210141683"]}],"countries":["CN"],"is_corresponding":true,"raw_author_name":"Zhong Wang","raw_affiliation_strings":["Institute of Basic Research in Clinical Medicine, China Academy of Chinese Medical Sciences , China"],"raw_orcid":null,"affiliations":[{"raw_affiliation_string":"Institute of Basic Research in Clinical Medicine, China Academy of Chinese Medical Sciences , China","institution_ids":["https://openalex.org/I4210141683"]}]},{"author_position":"last","author":{"id":"https://openalex.org/A5052838340","display_name":"Xuezhong Zhou","orcid":"https://orcid.org/0000-0002-4713-3594"},"institutions":[{"id":"https://openalex.org/I21193070","display_name":"Beijing Jiaotong University","ror":"https://ror.org/01yj56c84","country_code":"CN","type":"education","lineage":["https://openalex.org/I21193070"]}],"countries":["CN"],"is_corresponding":true,"raw_author_name":"Xuezhong Zhou","raw_affiliation_strings":["Institute of Medical Intelligence, Beijing Key Lab of Traffic Data Analysis and Mining, School of Computer and Information Technology, Beijing Jiaotong University , China"],"raw_orcid":null,"affiliations":[{"raw_affiliation_string":"Institute of Medical Intelligence, Beijing Key Lab of Traffic Data Analysis and Mining, School of Computer and Information Technology, Beijing Jiaotong University , China","institution_ids":["https://openalex.org/I21193070"]}]}],"institutions":[],"countries_distinct_count":1,"institutions_distinct_count":16,"corresponding_author_ids":["https://openalex.org/A5052838340","https://openalex.org/A5100435291"],"corresponding_institution_ids":["https://openalex.org/I21193070","https://openalex.org/I4210141683"],"apc_list":{"value":4011,"currency":"USD","value_usd":4011},"apc_paid":null,"fwci":2.8922,"has_fulltext":true,"cited_by_count":19,"citation_normalized_percentile":{"value":0.92139467,"is_in_top_1_percent":false,"is_in_top_10_percent":true},"cited_by_percentile_year":{"min":94,"max":99},"biblio":{"volume":"24","issue":"1","first_page":null,"last_page":null},"is_retracted":false,"is_paratext":false,"is_xpac":false,"primary_topic":{"id":"https://openalex.org/T10211","display_name":"Computational Drug Discovery Methods","score":1.0,"subfield":{"id":"https://openalex.org/subfields/1703","display_name":"Computational Theory and Mathematics"},"field":{"id":"https://openalex.org/fields/17","display_name":"Computer Science"},"domain":{"id":"https://openalex.org/domains/3","display_name":"Physical Sciences"}},"topics":[{"id":"https://openalex.org/T10211","display_name":"Computational Drug Discovery Methods","score":1.0,"subfield":{"id":"https://openalex.org/subfields/1703","display_name":"Computational Theory and Mathematics"},"field":{"id":"https://openalex.org/fields/17","display_name":"Computer Science"},"domain":{"id":"https://openalex.org/domains/3","display_name":"Physical Sciences"}},{"id":"https://openalex.org/T10887","display_name":"Bioinformatics and Genomic Networks","score":0.9746999740600586,"subfield":{"id":"https://openalex.org/subfields/1312","display_name":"Molecular Biology"},"field":{"id":"https://openalex.org/fields/13","display_name":"Biochemistry, Genetics and Molecular Biology"},"domain":{"id":"https://openalex.org/domains/1","display_name":"Life Sciences"}},{"id":"https://openalex.org/T10836","display_name":"Metabolomics and Mass Spectrometry Studies","score":0.9652000069618225,"subfield":{"id":"https://openalex.org/subfields/1312","display_name":"Molecular Biology"},"field":{"id":"https://openalex.org/fields/13","display_name":"Biochemistry, Genetics and Molecular Biology"},"domain":{"id":"https://openalex.org/domains/1","display_name":"Life Sciences"}}],"keywords":[{"id":"https://openalex.org/keywords/drug-repositioning","display_name":"Drug repositioning","score":0.7216646671295166},{"id":"https://openalex.org/keywords/computer-science","display_name":"Computer science","score":0.7161906957626343},{"id":"https://openalex.org/keywords/ranking","display_name":"Ranking (information retrieval)","score":0.6820172071456909},{"id":"https://openalex.org/keywords/drug","display_name":"Drug","score":0.5817725658416748},{"id":"https://openalex.org/keywords/machine-learning","display_name":"Machine learning","score":0.5437684059143066},{"id":"https://openalex.org/keywords/embedding","display_name":"Embedding","score":0.5308806896209717},{"id":"https://openalex.org/keywords/artificial-intelligence","display_name":"Artificial intelligence","score":0.4960976541042328},{"id":"https://openalex.org/keywords/set","display_name":"Set (abstract data type)","score":0.4687604606151581},{"id":"https://openalex.org/keywords/data-mining","display_name":"Data mining","score":0.4658404588699341},{"id":"https://openalex.org/keywords/reliability","display_name":"Reliability (semiconductor)","score":0.44720566272735596},{"id":"https://openalex.org/keywords/learning-to-rank","display_name":"Learning to rank","score":0.4313018321990967},{"id":"https://openalex.org/keywords/rank","display_name":"Rank (graph theory)","score":0.4163548946380615},{"id":"https://openalex.org/keywords/medicine","display_name":"Medicine","score":0.2255377173423767},{"id":"https://openalex.org/keywords/pharmacology","display_name":"Pharmacology","score":0.14659512042999268},{"id":"https://openalex.org/keywords/mathematics","display_name":"Mathematics","score":0.09783771634101868}],"concepts":[{"id":"https://openalex.org/C103637391","wikidata":"https://www.wikidata.org/wiki/Q5308921","display_name":"Drug repositioning","level":3,"score":0.7216646671295166},{"id":"https://openalex.org/C41008148","wikidata":"https://www.wikidata.org/wiki/Q21198","display_name":"Computer science","level":0,"score":0.7161906957626343},{"id":"https://openalex.org/C189430467","wikidata":"https://www.wikidata.org/wiki/Q7293293","display_name":"Ranking (information retrieval)","level":2,"score":0.6820172071456909},{"id":"https://openalex.org/C2780035454","wikidata":"https://www.wikidata.org/wiki/Q8386","display_name":"Drug","level":2,"score":0.5817725658416748},{"id":"https://openalex.org/C119857082","wikidata":"https://www.wikidata.org/wiki/Q2539","display_name":"Machine learning","level":1,"score":0.5437684059143066},{"id":"https://openalex.org/C41608201","wikidata":"https://www.wikidata.org/wiki/Q980509","display_name":"Embedding","level":2,"score":0.5308806896209717},{"id":"https://openalex.org/C154945302","wikidata":"https://www.wikidata.org/wiki/Q11660","display_name":"Artificial intelligence","level":1,"score":0.4960976541042328},{"id":"https://openalex.org/C177264268","wikidata":"https://www.wikidata.org/wiki/Q1514741","display_name":"Set (abstract data type)","level":2,"score":0.4687604606151581},{"id":"https://openalex.org/C124101348","wikidata":"https://www.wikidata.org/wiki/Q172491","display_name":"Data mining","level":1,"score":0.4658404588699341},{"id":"https://openalex.org/C43214815","wikidata":"https://www.wikidata.org/wiki/Q7310987","display_name":"Reliability (semiconductor)","level":3,"score":0.44720566272735596},{"id":"https://openalex.org/C86037889","wikidata":"https://www.wikidata.org/wiki/Q4330127","display_name":"Learning to rank","level":3,"score":0.4313018321990967},{"id":"https://openalex.org/C164226766","wikidata":"https://www.wikidata.org/wiki/Q7293202","display_name":"Rank (graph theory)","level":2,"score":0.4163548946380615},{"id":"https://openalex.org/C71924100","wikidata":"https://www.wikidata.org/wiki/Q11190","display_name":"Medicine","level":0,"score":0.2255377173423767},{"id":"https://openalex.org/C98274493","wikidata":"https://www.wikidata.org/wiki/Q128406","display_name":"Pharmacology","level":1,"score":0.14659512042999268},{"id":"https://openalex.org/C33923547","wikidata":"https://www.wikidata.org/wiki/Q395","display_name":"Mathematics","level":0,"score":0.09783771634101868},{"id":"https://openalex.org/C114614502","wikidata":"https://www.wikidata.org/wiki/Q76592","display_name":"Combinatorics","level":1,"score":0.0},{"id":"https://openalex.org/C163258240","wikidata":"https://www.wikidata.org/wiki/Q25342","display_name":"Power (physics)","level":2,"score":0.0},{"id":"https://openalex.org/C199360897","wikidata":"https://www.wikidata.org/wiki/Q9143","display_name":"Programming language","level":1,"score":0.0},{"id":"https://openalex.org/C62520636","wikidata":"https://www.wikidata.org/wiki/Q944","display_name":"Quantum mechanics","level":1,"score":0.0},{"id":"https://openalex.org/C121332964","wikidata":"https://www.wikidata.org/wiki/Q413","display_name":"Physics","level":0,"score":0.0}],"mesh":[{"descriptor_ui":"D000068598","descriptor_name":"Data Accuracy","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D000068598","descriptor_name":"Data Accuracy","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D000068598","descriptor_name":"Data Accuracy","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D000465","descriptor_name":"Algorithms","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D000465","descriptor_name":"Algorithms","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D000465","descriptor_name":"Algorithms","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D015203","descriptor_name":"Reproducibility of Results","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D015203","descriptor_name":"Reproducibility of Results","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D015203","descriptor_name":"Reproducibility of Results","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D019295","descriptor_name":"Computational Biology","qualifier_ui":"Q000379","qualifier_name":"methods","is_major_topic":true},{"descriptor_ui":"D019295","descriptor_name":"Computational Biology","qualifier_ui":"Q000379","qualifier_name":"methods","is_major_topic":true},{"descriptor_ui":"D019295","descriptor_name":"Computational Biology","qualifier_ui":"Q000379","qualifier_name":"methods","is_major_topic":true},{"descriptor_ui":"D058492","descriptor_name":"Drug Repositioning","qualifier_ui":"Q000379","qualifier_name":"methods","is_major_topic":true},{"descriptor_ui":"D058492","descriptor_name":"Drug Repositioning","qualifier_ui":"Q000379","qualifier_name":"methods","is_major_topic":true},{"descriptor_ui":"D058492","descriptor_name":"Drug Repositioning","qualifier_ui":"Q000379","qualifier_name":"methods","is_major_topic":true}],"locations_count":2,"locations":[{"id":"doi:10.1093/bib/bbac518","is_oa":true,"landing_page_url":"https://doi.org/10.1093/bib/bbac518","pdf_url":"https://academic.oup.com/bib/article-pdf/24/1/bbac518/48783033/bbac518.pdf","source":{"id":"https://openalex.org/S91767247","display_name":"Briefings in Bioinformatics","issn_l":"1467-5463","issn":["1467-5463","1477-4054"],"is_oa":false,"is_in_doaj":true,"is_core":true,"host_organization":"https://openalex.org/P4310311648","host_organization_name":"Oxford University Press","host_organization_lineage":["https://openalex.org/P4310311648","https://openalex.org/P4310311647"],"host_organization_lineage_names":["Oxford University Press","University of Oxford"],"type":"journal"},"license":null,"license_id":null,"version":"publishedVersion","is_accepted":true,"is_published":true,"raw_source_name":"Briefings in Bioinformatics","raw_type":"journal-article"},{"id":"pmid:36562715","is_oa":false,"landing_page_url":"https://pubmed.ncbi.nlm.nih.gov/36562715","pdf_url":null,"source":{"id":"https://openalex.org/S4306525036","display_name":"PubMed","issn_l":null,"issn":null,"is_oa":false,"is_in_doaj":false,"is_core":false,"host_organization":"https://openalex.org/I1299303238","host_organization_name":"National Institutes of Health","host_organization_lineage":["https://openalex.org/I1299303238"],"host_organization_lineage_names":[],"type":"repository"},"license":null,"license_id":null,"version":"publishedVersion","is_accepted":true,"is_published":true,"raw_source_name":"Briefings in bioinformatics","raw_type":null}],"best_oa_location":{"id":"doi:10.1093/bib/bbac518","is_oa":true,"landing_page_url":"https://doi.org/10.1093/bib/bbac518","pdf_url":"https://academic.oup.com/bib/article-pdf/24/1/bbac518/48783033/bbac518.pdf","source":{"id":"https://openalex.org/S91767247","display_name":"Briefings in Bioinformatics","issn_l":"1467-5463","issn":["1467-5463","1477-4054"],"is_oa":false,"is_in_doaj":true,"is_core":true,"host_organization":"https://openalex.org/P4310311648","host_organization_name":"Oxford University Press","host_organization_lineage":["https://openalex.org/P4310311648","https://openalex.org/P4310311647"],"host_organization_lineage_names":["Oxford University Press","University of Oxford"],"type":"journal"},"license":null,"license_id":null,"version":"publishedVersion","is_accepted":true,"is_published":true,"raw_source_name":"Briefings in Bioinformatics","raw_type":"journal-article"},"sustainable_development_goals":[],"awards":[{"id":"https://openalex.org/G1449671467","display_name":null,"funder_award_id":"CI2021A03808","funder_id":"https://openalex.org/F4320323485","funder_display_name":"China Academy of Chinese Medical Sciences"},{"id":"https://openalex.org/G2906908192","display_name":null,"funder_award_id":"82174533","funder_id":"https://openalex.org/F4320321001","funder_display_name":"National Natural Science Foundation of China"},{"id":"https://openalex.org/G3285280749","display_name":null,"funder_award_id":"2020YFC0845000","funder_id":"https://openalex.org/F4320335777","funder_display_name":"National Key Research and Development Program of China"},{"id":"https://openalex.org/G335733250","display_name":null,"funder_award_id":"2018AAA0100302","funder_id":"https://openalex.org/F4320335777","funder_display_name":"National Key Research and Development Program of China"},{"id":"https://openalex.org/G35252839","display_name":null,"funder_award_id":"2020YFC0841600","funder_id":"https://openalex.org/F4320323485","funder_display_name":"China Academy of Chinese Medical Sciences"},{"id":"https://openalex.org/G4321457370","display_name":null,"funder_award_id":"2020YFC0845000-4","funder_id":"https://openalex.org/F4320323485","funder_display_name":"China Academy of Chinese Medical Sciences"},{"id":"https://openalex.org/G5552155314","display_name":null,"funder_award_id":"2020YFC0845000-4","funder_id":"https://openalex.org/F4320335777","funder_display_name":"National Key Research and Development Program of China"},{"id":"https://openalex.org/G5896578809","display_name":null,"funder_award_id":"82174533","funder_id":"https://openalex.org/F4320323485","funder_display_name":"China Academy of Chinese Medical Sciences"},{"id":"https://openalex.org/G6722733803","display_name":null,"funder_award_id":"M21012","funder_id":"https://openalex.org/F4320323485","funder_display_name":"China Academy of Chinese Medical Sciences"},{"id":"https://openalex.org/G7015565034","display_name":null,"funder_award_id":"82204941","funder_id":"https://openalex.org/F4320321001","funder_display_name":"National Natural Science Foundation of China"},{"id":"https://openalex.org/G7207612441","display_name":null,"funder_award_id":"2017ZX09301059","funder_id":"https://openalex.org/F4320321001","funder_display_name":"National Natural Science Foundation of China"},{"id":"https://openalex.org/G7825192739","display_name":null,"funder_award_id":"2022RC022","funder_id":"https://openalex.org/F4320335787","funder_display_name":"Fundamental Research Funds for the Central Universities"},{"id":"https://openalex.org/G8561677320","display_name":null,"funder_award_id":"M21012","funder_id":"https://openalex.org/F4320322919","funder_display_name":"Natural Science Foundation of Beijing Municipality"},{"id":"https://openalex.org/G8824205509","display_name":null,"funder_award_id":"2020YFC0841600","funder_id":"https://openalex.org/F4320335777","funder_display_name":"National Key Research and Development Program of China"}],"funders":[{"id":"https://openalex.org/F4320321001","display_name":"National Natural Science Foundation of China","ror":"https://ror.org/01h0zpd94"},{"id":"https://openalex.org/F4320322919","display_name":"Natural Science Foundation of Beijing Municipality","ror":null},{"id":"https://openalex.org/F4320323485","display_name":"China Academy of Chinese Medical Sciences","ror":"https://ror.org/042pgcv68"},{"id":"https://openalex.org/F4320335777","display_name":"National Key Research and Development Program of China","ror":null},{"id":"https://openalex.org/F4320335787","display_name":"Fundamental Research Funds for the Central Universities","ror":null}],"has_content":{"pdf":true,"grobid_xml":true},"content_urls":{"pdf":"https://content.openalex.org/works/W4312114210.pdf","grobid_xml":"https://content.openalex.org/works/W4312114210.grobid-xml"},"referenced_works_count":67,"referenced_works":["https://openalex.org/W8870360","https://openalex.org/W90362830","https://openalex.org/W1888005072","https://openalex.org/W1966443646","https://openalex.org/W1982621001","https://openalex.org/W2020274161","https://openalex.org/W2062941476","https://openalex.org/W2071598933","https://openalex.org/W2083521902","https://openalex.org/W2090891622","https://openalex.org/W2093862029","https://openalex.org/W2100929382","https://openalex.org/W2108862644","https://openalex.org/W2112946624","https://openalex.org/W2115584760","https://openalex.org/W2117446654","https://openalex.org/W2142535891","https://openalex.org/W2143331230","https://openalex.org/W2151357092","https://openalex.org/W2154851992","https://openalex.org/W2155157373","https://openalex.org/W2157225005","https://openalex.org/W2159092541","https://openalex.org/W2162965868","https://openalex.org/W2164026551","https://openalex.org/W2169585233","https://openalex.org/W2387462954","https://openalex.org/W2393319904","https://openalex.org/W2767891136","https://openalex.org/W2774514250","https://openalex.org/W2890210261","https://openalex.org/W2898593560","https://openalex.org/W2899291554","https://openalex.org/W2913843460","https://openalex.org/W2922386288","https://openalex.org/W2962756421","https://openalex.org/W3000082418","https://openalex.org/W3002685258","https://openalex.org/W3010110722","https://openalex.org/W3011072970","https://openalex.org/W3028722847","https://openalex.org/W3035524453","https://openalex.org/W3036981277","https://openalex.org/W3043011806","https://openalex.org/W3048079539","https://openalex.org/W3082490235","https://openalex.org/W3093030756","https://openalex.org/W3093150592","https://openalex.org/W3096999989","https://openalex.org/W3104097132","https://openalex.org/W3105035347","https://openalex.org/W3119857312","https://openalex.org/W3120408379","https://openalex.org/W3175902523","https://openalex.org/W3196788125","https://openalex.org/W3205588018","https://openalex.org/W4220985919","https://openalex.org/W4229038932","https://openalex.org/W4281387136","https://openalex.org/W4281673370","https://openalex.org/W4322614756","https://openalex.org/W6600367688","https://openalex.org/W6603694148","https://openalex.org/W6675007597","https://openalex.org/W6677385034","https://openalex.org/W6730084236","https://openalex.org/W6811528620"],"related_works":["https://openalex.org/W3127142483","https://openalex.org/W3160516639","https://openalex.org/W4385565564","https://openalex.org/W2898073868","https://openalex.org/W2138488530","https://openalex.org/W4390446658","https://openalex.org/W2971071571","https://openalex.org/W2798835721","https://openalex.org/W2922169395","https://openalex.org/W2387658907"],"abstract_inverted_index":{"As":[0],"one":[1],"of":[2,17,26,35,57,84,111,135,171,181],"the":[3,22,38,54,108,172],"most":[4],"vital":[5],"methods":[6,42,50,105],"in":[7],"drug":[8,10,40,75,127,190],"development,":[9],"repositioning":[11,41,76],"emphasizes":[12],"further":[13],"analysis":[14,176],"and":[15,28,48,66,98,118,133,163],"research":[16],"approved":[18],"drugs":[19,90,112,136],"based":[20],"on":[21,161,165],"existing":[23,39],"large":[24],"amount":[25],"clinical":[27,189],"experimental":[29],"data":[30,123],"to":[31,63,106,146,187],"identify":[32],"new":[33],"indications":[34],"drugs.":[36,149],"However,":[37],"didn't":[43],"achieve":[44],"enough":[45],"prediction":[46,157],"performance,":[47],"these":[49],"do":[51],"not":[52],"consider":[53],"effectiveness":[55,85],"information":[56,93],"drugs,":[58],"which":[59,80,184],"make":[60,81],"it":[61],"difficult":[62],"obtain":[64],"reliable":[65],"valuable":[67],"results.":[68],"In":[69],"this":[70],"study,":[71],"we":[72],"proposed":[73],"a":[74,114,120,141],"framework":[77],"termed":[78],"DRONet,":[79],"full":[82],"use":[83],"comparative":[86],"relationships":[87],"(ECR)":[88],"among":[89],"as":[91],"prior":[92],"by":[94],"combining":[95],"network":[96,103],"embedding":[97,104,131],"ranking":[99,143],"learning.":[100],"We":[101],"utilized":[102],"learn":[107],"deep":[109],"features":[110,132],"from":[113],"heterogeneous":[115],"drug-disease":[116],"network,":[117],"constructed":[119],"high-quality":[121],"drug-indication":[122],"set":[124],"including":[125],"effectiveness-based":[126],"contrast":[128],"relationships.":[129],"The":[130,174],"ECR":[134],"are":[137],"combined":[138],"effectively":[139],"through":[140],"designed":[142],"learning":[144],"model":[145],"prioritize":[147],"candidate":[148],"Comprehensive":[150],"experiments":[151],"show":[152],"that":[153],"DRONet":[154],"has":[155,185],"higher":[156],"accuracy":[158],"(improving":[159],"87.4%":[160],"Hit@1":[162],"37.9%":[164],"mean":[166],"reciprocal":[167],"rank)":[168],"than":[169],"state":[170],"art.":[173],"case":[175],"also":[177],"demonstrates":[178],"high":[179],"reliability":[180],"predicted":[182],"results,":[183],"potential":[186],"guide":[188],"development.":[191]},"counts_by_year":[{"year":2025,"cited_by_count":9},{"year":2024,"cited_by_count":8},{"year":2023,"cited_by_count":2}],"updated_date":"2026-05-21T06:26:12.895304","created_date":"2025-10-10T00:00:00"}
