{"id":"https://openalex.org/W4310456519","doi":"https://doi.org/10.1093/bib/bbac498","title":"SPRDA: a link prediction approach based on the structural perturbation to infer disease-associated Piwi-interacting RNAs","display_name":"SPRDA: a link prediction approach based on the structural perturbation to infer disease-associated Piwi-interacting RNAs","publication_year":2022,"publication_date":"2022-11-29","ids":{"openalex":"https://openalex.org/W4310456519","doi":"https://doi.org/10.1093/bib/bbac498","pmid":"https://pubmed.ncbi.nlm.nih.gov/36445194"},"language":"en","primary_location":{"id":"doi:10.1093/bib/bbac498","is_oa":true,"landing_page_url":"https://doi.org/10.1093/bib/bbac498","pdf_url":"https://academic.oup.com/bib/article-pdf/24/1/bbac498/48782618/bbac498.pdf","source":{"id":"https://openalex.org/S91767247","display_name":"Briefings in Bioinformatics","issn_l":"1467-5463","issn":["1467-5463","1477-4054"],"is_oa":false,"is_in_doaj":true,"is_core":true,"host_organization":"https://openalex.org/P4310311648","host_organization_name":"Oxford University Press","host_organization_lineage":["https://openalex.org/P4310311648","https://openalex.org/P4310311647"],"host_organization_lineage_names":["Oxford University Press","University of Oxford"],"type":"journal"},"license":null,"license_id":null,"version":"publishedVersion","is_accepted":true,"is_published":true,"raw_source_name":"Briefings in Bioinformatics","raw_type":"journal-article"},"type":"article","indexed_in":["crossref","doaj","pubmed"],"open_access":{"is_oa":true,"oa_status":"bronze","oa_url":"https://academic.oup.com/bib/article-pdf/24/1/bbac498/48782618/bbac498.pdf","any_repository_has_fulltext":false},"authorships":[{"author_position":"first","author":{"id":"https://openalex.org/A5032517198","display_name":"Kai Zheng","orcid":"https://orcid.org/0000-0003-1578-1818"},"institutions":[{"id":"https://openalex.org/I139660479","display_name":"Central South University","ror":"https://ror.org/00f1zfq44","country_code":"CN","type":"education","lineage":["https://openalex.org/I139660479"]},{"id":"https://openalex.org/I4210159676","display_name":"Zaozhuang University","ror":"https://ror.org/05x21tp94","country_code":"CN","type":"education","lineage":["https://openalex.org/I4210159676"]}],"countries":["CN"],"is_corresponding":false,"raw_author_name":"Kai Zheng","raw_affiliation_strings":["College of Information Science and Engineering, Zaozhuang University , Zaozhuang 277100 , China","Hunan Provincial Key Lab on Bioinformatics, School of Computer Science and Engineering, Central South University , Changsha, 410083 , China"],"raw_orcid":null,"affiliations":[{"raw_affiliation_string":"College of Information Science and Engineering, Zaozhuang University , Zaozhuang 277100 , China","institution_ids":["https://openalex.org/I4210159676"]},{"raw_affiliation_string":"Hunan Provincial Key Lab on Bioinformatics, School of Computer Science and Engineering, Central South University , Changsha, 410083 , China","institution_ids":["https://openalex.org/I139660479"]}]},{"author_position":"middle","author":{"id":"https://openalex.org/A5022297444","display_name":"Xinlu Zhang","orcid":"https://orcid.org/0000-0001-7668-091X"},"institutions":[{"id":"https://openalex.org/I2800372957","display_name":"China Electronics Technology Group Corporation","ror":"https://ror.org/0098hst83","country_code":"CN","type":"company","lineage":["https://openalex.org/I2800372957"]}],"countries":["CN"],"is_corresponding":false,"raw_author_name":"Xin-Lu Zhang","raw_affiliation_strings":["Civil Product General Research Institute, The 36th Research Institute of China Electronics Technology Group Corporation , Jiaxing, 314000 , China"],"raw_orcid":null,"affiliations":[{"raw_affiliation_string":"Civil Product General Research Institute, The 36th Research Institute of China Electronics Technology Group Corporation , Jiaxing, 314000 , China","institution_ids":["https://openalex.org/I2800372957"]}]},{"author_position":"middle","author":{"id":"https://openalex.org/A5100436059","display_name":"Lei Wang","orcid":"https://orcid.org/0000-0003-0184-307X"},"institutions":[{"id":"https://openalex.org/I4210159676","display_name":"Zaozhuang University","ror":"https://ror.org/05x21tp94","country_code":"CN","type":"education","lineage":["https://openalex.org/I4210159676"]},{"id":"https://openalex.org/I4210165264","display_name":"Guangxi Academy of Sciences","ror":"https://ror.org/054x1kd82","country_code":"CN","type":"government","lineage":["https://openalex.org/I4210165264"]}],"countries":["CN"],"is_corresponding":true,"raw_author_name":"Lei Wang","raw_affiliation_strings":["Big Data and Intelligent Computing Research Center, Guangxi Academy of Sciences , Nanning, 530007 , China","College of Information Science and Engineering, Zaozhuang University , Zaozhuang 277100 , China"],"raw_orcid":"https://orcid.org/0000-0003-0184-307X","affiliations":[{"raw_affiliation_string":"Big Data and Intelligent Computing Research Center, Guangxi Academy of Sciences , Nanning, 530007 , China","institution_ids":["https://openalex.org/I4210165264"]},{"raw_affiliation_string":"College of Information Science and Engineering, Zaozhuang University , Zaozhuang 277100 , China","institution_ids":["https://openalex.org/I4210159676"]}]},{"author_position":"middle","author":{"id":"https://openalex.org/A5019805735","display_name":"Zhu\u2010Hong You","orcid":"https://orcid.org/0000-0003-1266-2696"},"institutions":[{"id":"https://openalex.org/I4210165264","display_name":"Guangxi Academy of Sciences","ror":"https://ror.org/054x1kd82","country_code":"CN","type":"government","lineage":["https://openalex.org/I4210165264"]}],"countries":["CN"],"is_corresponding":true,"raw_author_name":"Zhu-Hong You","raw_affiliation_strings":["Big Data and Intelligent Computing Research Center, Guangxi Academy of Sciences , Nanning, 530007 , China"],"raw_orcid":null,"affiliations":[{"raw_affiliation_string":"Big Data and Intelligent Computing Research Center, Guangxi Academy of Sciences , Nanning, 530007 , China","institution_ids":["https://openalex.org/I4210165264"]}]},{"author_position":"middle","author":{"id":"https://openalex.org/A5059046043","display_name":"Boya Ji","orcid":"https://orcid.org/0000-0001-8458-1751"},"institutions":[{"id":"https://openalex.org/I16609230","display_name":"Hunan University","ror":"https://ror.org/05htk5m33","country_code":"CN","type":"education","lineage":["https://openalex.org/I16609230"]}],"countries":["CN"],"is_corresponding":false,"raw_author_name":"Bo-Ya Ji","raw_affiliation_strings":["College of Computer Science and Electronic Engineering, Hunan University , Changsha, 410006 , China"],"raw_orcid":null,"affiliations":[{"raw_affiliation_string":"College of Computer Science and Electronic Engineering, Hunan University , Changsha, 410006 , China","institution_ids":["https://openalex.org/I16609230"]}]},{"author_position":"middle","author":{"id":"https://openalex.org/A5044168323","display_name":"Xiao Liang","orcid":"https://orcid.org/0000-0002-6340-7647"},"institutions":[{"id":"https://openalex.org/I139660479","display_name":"Central South University","ror":"https://ror.org/00f1zfq44","country_code":"CN","type":"education","lineage":["https://openalex.org/I139660479"]}],"countries":["CN"],"is_corresponding":false,"raw_author_name":"Xiao Liang","raw_affiliation_strings":["Hunan Provincial Key Lab on Bioinformatics, School of Computer Science and Engineering, Central South University , Changsha, 410083 , China"],"raw_orcid":null,"affiliations":[{"raw_affiliation_string":"Hunan Provincial Key Lab on Bioinformatics, School of Computer Science and Engineering, Central South University , Changsha, 410083 , China","institution_ids":["https://openalex.org/I139660479"]}]},{"author_position":"last","author":{"id":"https://openalex.org/A5100734156","display_name":"Zhengwei Li","orcid":"https://orcid.org/0000-0003-1644-1006"},"institutions":[{"id":"https://openalex.org/I4210159676","display_name":"Zaozhuang University","ror":"https://ror.org/05x21tp94","country_code":"CN","type":"education","lineage":["https://openalex.org/I4210159676"]},{"id":"https://openalex.org/I4210165264","display_name":"Guangxi Academy of Sciences","ror":"https://ror.org/054x1kd82","country_code":"CN","type":"government","lineage":["https://openalex.org/I4210165264"]}],"countries":["CN"],"is_corresponding":true,"raw_author_name":"Zheng-Wei Li","raw_affiliation_strings":["Big Data and Intelligent Computing Research Center, Guangxi Academy of Sciences , Nanning, 530007 , China","College of Information Science and Engineering, Zaozhuang University , Zaozhuang 277100 , China"],"raw_orcid":null,"affiliations":[{"raw_affiliation_string":"Big Data and Intelligent Computing Research Center, Guangxi Academy of Sciences , Nanning, 530007 , China","institution_ids":["https://openalex.org/I4210165264"]},{"raw_affiliation_string":"College of Information Science and Engineering, Zaozhuang University , Zaozhuang 277100 , China","institution_ids":["https://openalex.org/I4210159676"]}]}],"institutions":[],"countries_distinct_count":1,"institutions_distinct_count":5,"corresponding_author_ids":["https://openalex.org/A5019805735","https://openalex.org/A5100436059","https://openalex.org/A5100734156"],"corresponding_institution_ids":["https://openalex.org/I4210159676","https://openalex.org/I4210165264"],"apc_list":{"value":4011,"currency":"USD","value_usd":4011},"apc_paid":null,"fwci":8.2338,"has_fulltext":true,"cited_by_count":44,"citation_normalized_percentile":{"value":0.97662992,"is_in_top_1_percent":false,"is_in_top_10_percent":true},"cited_by_percentile_year":{"min":89,"max":100},"biblio":{"volume":"24","issue":"1","first_page":null,"last_page":null},"is_retracted":false,"is_paratext":false,"is_xpac":false,"primary_topic":{"id":"https://openalex.org/T10434","display_name":"Chromosomal and Genetic Variations","score":0.9995999932289124,"subfield":{"id":"https://openalex.org/subfields/1110","display_name":"Plant Science"},"field":{"id":"https://openalex.org/fields/11","display_name":"Agricultural and Biological Sciences"},"domain":{"id":"https://openalex.org/domains/1","display_name":"Life Sciences"}},"topics":[{"id":"https://openalex.org/T10434","display_name":"Chromosomal and Genetic Variations","score":0.9995999932289124,"subfield":{"id":"https://openalex.org/subfields/1110","display_name":"Plant Science"},"field":{"id":"https://openalex.org/fields/11","display_name":"Agricultural and Biological Sciences"},"domain":{"id":"https://openalex.org/domains/1","display_name":"Life Sciences"}},{"id":"https://openalex.org/T10878","display_name":"CRISPR and Genetic Engineering","score":0.9915000200271606,"subfield":{"id":"https://openalex.org/subfields/1312","display_name":"Molecular Biology"},"field":{"id":"https://openalex.org/fields/13","display_name":"Biochemistry, Genetics and Molecular Biology"},"domain":{"id":"https://openalex.org/domains/1","display_name":"Life Sciences"}},{"id":"https://openalex.org/T11213","display_name":"Genomic variations and chromosomal abnormalities","score":0.9886000156402588,"subfield":{"id":"https://openalex.org/subfields/1311","display_name":"Genetics"},"field":{"id":"https://openalex.org/fields/13","display_name":"Biochemistry, Genetics and Molecular Biology"},"domain":{"id":"https://openalex.org/domains/1","display_name":"Life Sciences"}}],"keywords":[{"id":"https://openalex.org/keywords/link","display_name":"Link (geometry)","score":0.7462899684906006},{"id":"https://openalex.org/keywords/piwi-interacting-rna","display_name":"Piwi-interacting RNA","score":0.7263476848602295},{"id":"https://openalex.org/keywords/computer-science","display_name":"Computer science","score":0.49304601550102234},{"id":"https://openalex.org/keywords/computational-biology","display_name":"Computational biology","score":0.4922720491886139},{"id":"https://openalex.org/keywords/perturbation","display_name":"Perturbation (astronomy)","score":0.4663616418838501},{"id":"https://openalex.org/keywords/disease","display_name":"Disease","score":0.41736865043640137},{"id":"https://openalex.org/keywords/bioinformatics","display_name":"Bioinformatics","score":0.3293211758136749},{"id":"https://openalex.org/keywords/biology","display_name":"Biology","score":0.3004288077354431},{"id":"https://openalex.org/keywords/rna","display_name":"RNA","score":0.28855425119400024},{"id":"https://openalex.org/keywords/genetics","display_name":"Genetics","score":0.24703502655029297},{"id":"https://openalex.org/keywords/physics","display_name":"Physics","score":0.1761544942855835},{"id":"https://openalex.org/keywords/medicine","display_name":"Medicine","score":0.16021379828453064},{"id":"https://openalex.org/keywords/computer-network","display_name":"Computer network","score":0.11081105470657349},{"id":"https://openalex.org/keywords/internal-medicine","display_name":"Internal medicine","score":0.09079623222351074},{"id":"https://openalex.org/keywords/rna-interference","display_name":"RNA interference","score":0.07429176568984985}],"concepts":[{"id":"https://openalex.org/C2778753846","wikidata":"https://www.wikidata.org/wiki/Q6554239","display_name":"Link (geometry)","level":2,"score":0.7462899684906006},{"id":"https://openalex.org/C147724379","wikidata":"https://www.wikidata.org/wiki/Q2367421","display_name":"Piwi-interacting RNA","level":5,"score":0.7263476848602295},{"id":"https://openalex.org/C41008148","wikidata":"https://www.wikidata.org/wiki/Q21198","display_name":"Computer science","level":0,"score":0.49304601550102234},{"id":"https://openalex.org/C70721500","wikidata":"https://www.wikidata.org/wiki/Q177005","display_name":"Computational biology","level":1,"score":0.4922720491886139},{"id":"https://openalex.org/C177918212","wikidata":"https://www.wikidata.org/wiki/Q803623","display_name":"Perturbation (astronomy)","level":2,"score":0.4663616418838501},{"id":"https://openalex.org/C2779134260","wikidata":"https://www.wikidata.org/wiki/Q12136","display_name":"Disease","level":2,"score":0.41736865043640137},{"id":"https://openalex.org/C60644358","wikidata":"https://www.wikidata.org/wiki/Q128570","display_name":"Bioinformatics","level":1,"score":0.3293211758136749},{"id":"https://openalex.org/C86803240","wikidata":"https://www.wikidata.org/wiki/Q420","display_name":"Biology","level":0,"score":0.3004288077354431},{"id":"https://openalex.org/C67705224","wikidata":"https://www.wikidata.org/wiki/Q11053","display_name":"RNA","level":3,"score":0.28855425119400024},{"id":"https://openalex.org/C54355233","wikidata":"https://www.wikidata.org/wiki/Q7162","display_name":"Genetics","level":1,"score":0.24703502655029297},{"id":"https://openalex.org/C121332964","wikidata":"https://www.wikidata.org/wiki/Q413","display_name":"Physics","level":0,"score":0.1761544942855835},{"id":"https://openalex.org/C71924100","wikidata":"https://www.wikidata.org/wiki/Q11190","display_name":"Medicine","level":0,"score":0.16021379828453064},{"id":"https://openalex.org/C31258907","wikidata":"https://www.wikidata.org/wiki/Q1301371","display_name":"Computer network","level":1,"score":0.11081105470657349},{"id":"https://openalex.org/C126322002","wikidata":"https://www.wikidata.org/wiki/Q11180","display_name":"Internal medicine","level":1,"score":0.09079623222351074},{"id":"https://openalex.org/C166703698","wikidata":"https://www.wikidata.org/wiki/Q201993","display_name":"RNA interference","level":4,"score":0.07429176568984985},{"id":"https://openalex.org/C62520636","wikidata":"https://www.wikidata.org/wiki/Q944","display_name":"Quantum mechanics","level":1,"score":0.0},{"id":"https://openalex.org/C104317684","wikidata":"https://www.wikidata.org/wiki/Q7187","display_name":"Gene","level":2,"score":0.0}],"mesh":[{"descriptor_ui":"D000094322","descriptor_name":"Piwi-Interacting RNA","qualifier_ui":null,"qualifier_name":null,"is_major_topic":true},{"descriptor_ui":"D000094322","descriptor_name":"Piwi-Interacting RNA","qualifier_ui":null,"qualifier_name":null,"is_major_topic":true},{"descriptor_ui":"D000094322","descriptor_name":"Piwi-Interacting RNA","qualifier_ui":null,"qualifier_name":null,"is_major_topic":true},{"descriptor_ui":"D006801","descriptor_name":"Humans","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D006801","descriptor_name":"Humans","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D006801","descriptor_name":"Humans","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D009369","descriptor_name":"Neoplasms","qualifier_ui":"Q000235","qualifier_name":"genetics","is_major_topic":true},{"descriptor_ui":"D009369","descriptor_name":"Neoplasms","qualifier_ui":"Q000235","qualifier_name":"genetics","is_major_topic":true},{"descriptor_ui":"D009369","descriptor_name":"Neoplasms","qualifier_ui":"Q000235","qualifier_name":"genetics","is_major_topic":true},{"descriptor_ui":"D009369","descriptor_name":"Neoplasms","qualifier_ui":"Q000378","qualifier_name":"metabolism","is_major_topic":true},{"descriptor_ui":"D009369","descriptor_name":"Neoplasms","qualifier_ui":"Q000378","qualifier_name":"metabolism","is_major_topic":true},{"descriptor_ui":"D009369","descriptor_name":"Neoplasms","qualifier_ui":"Q000378","qualifier_name":"metabolism","is_major_topic":true},{"descriptor_ui":"D034741","descriptor_name":"RNA, Small Interfering","qualifier_ui":"Q000235","qualifier_name":"genetics","is_major_topic":false},{"descriptor_ui":"D034741","descriptor_name":"RNA, Small Interfering","qualifier_ui":"Q000235","qualifier_name":"genetics","is_major_topic":false},{"descriptor_ui":"D034741","descriptor_name":"RNA, Small Interfering","qualifier_ui":"Q000235","qualifier_name":"genetics","is_major_topic":false},{"descriptor_ui":"D034741","descriptor_name":"RNA, Small Interfering","qualifier_ui":"Q000378","qualifier_name":"metabolism","is_major_topic":false},{"descriptor_ui":"D034741","descriptor_name":"RNA, Small Interfering","qualifier_ui":"Q000378","qualifier_name":"metabolism","is_major_topic":false},{"descriptor_ui":"D034741","descriptor_name":"RNA, Small Interfering","qualifier_ui":"Q000378","qualifier_name":"metabolism","is_major_topic":false}],"locations_count":2,"locations":[{"id":"doi:10.1093/bib/bbac498","is_oa":true,"landing_page_url":"https://doi.org/10.1093/bib/bbac498","pdf_url":"https://academic.oup.com/bib/article-pdf/24/1/bbac498/48782618/bbac498.pdf","source":{"id":"https://openalex.org/S91767247","display_name":"Briefings in Bioinformatics","issn_l":"1467-5463","issn":["1467-5463","1477-4054"],"is_oa":false,"is_in_doaj":true,"is_core":true,"host_organization":"https://openalex.org/P4310311648","host_organization_name":"Oxford University Press","host_organization_lineage":["https://openalex.org/P4310311648","https://openalex.org/P4310311647"],"host_organization_lineage_names":["Oxford University Press","University of Oxford"],"type":"journal"},"license":null,"license_id":null,"version":"publishedVersion","is_accepted":true,"is_published":true,"raw_source_name":"Briefings in Bioinformatics","raw_type":"journal-article"},{"id":"pmid:36445194","is_oa":false,"landing_page_url":"https://pubmed.ncbi.nlm.nih.gov/36445194","pdf_url":null,"source":{"id":"https://openalex.org/S4306525036","display_name":"PubMed","issn_l":null,"issn":null,"is_oa":false,"is_in_doaj":false,"is_core":false,"host_organization":"https://openalex.org/I1299303238","host_organization_name":"National Institutes of Health","host_organization_lineage":["https://openalex.org/I1299303238"],"host_organization_lineage_names":[],"type":"repository"},"license":null,"license_id":null,"version":"publishedVersion","is_accepted":true,"is_published":true,"raw_source_name":"Briefings in bioinformatics","raw_type":null}],"best_oa_location":{"id":"doi:10.1093/bib/bbac498","is_oa":true,"landing_page_url":"https://doi.org/10.1093/bib/bbac498","pdf_url":"https://academic.oup.com/bib/article-pdf/24/1/bbac498/48782618/bbac498.pdf","source":{"id":"https://openalex.org/S91767247","display_name":"Briefings in Bioinformatics","issn_l":"1467-5463","issn":["1467-5463","1477-4054"],"is_oa":false,"is_in_doaj":true,"is_core":true,"host_organization":"https://openalex.org/P4310311648","host_organization_name":"Oxford University Press","host_organization_lineage":["https://openalex.org/P4310311648","https://openalex.org/P4310311647"],"host_organization_lineage_names":["Oxford University Press","University of Oxford"],"type":"journal"},"license":null,"license_id":null,"version":"publishedVersion","is_accepted":true,"is_published":true,"raw_source_name":"Briefings in Bioinformatics","raw_type":"journal-article"},"sustainable_development_goals":[{"display_name":"Good health and well-being","score":0.5899999737739563,"id":"https://metadata.un.org/sdg/3"}],"awards":[{"id":"https://openalex.org/G3588239447","display_name":null,"funder_award_id":"61702444","funder_id":"https://openalex.org/F4320321001","funder_display_name":"National Natural Science Foundation of China"},{"id":"https://openalex.org/G7911954467","display_name":null,"funder_award_id":"62172355","funder_id":"https://openalex.org/F4320321001","funder_display_name":"National Natural Science Foundation of China"}],"funders":[{"id":"https://openalex.org/F4320321001","display_name":"National Natural Science Foundation of China","ror":"https://ror.org/01h0zpd94"}],"has_content":{"grobid_xml":true,"pdf":true},"content_urls":{"pdf":"https://content.openalex.org/works/W4310456519.pdf","grobid_xml":"https://content.openalex.org/works/W4310456519.grobid-xml"},"referenced_works_count":46,"referenced_works":["https://openalex.org/W320453502","https://openalex.org/W1976342457","https://openalex.org/W1977382765","https://openalex.org/W1977733607","https://openalex.org/W1982164922","https://openalex.org/W2011832929","https://openalex.org/W2020441317","https://openalex.org/W2028444170","https://openalex.org/W2037108634","https://openalex.org/W2062688476","https://openalex.org/W2091156624","https://openalex.org/W2094545350","https://openalex.org/W2104677379","https://openalex.org/W2113377893","https://openalex.org/W2114298461","https://openalex.org/W2118420574","https://openalex.org/W2127563440","https://openalex.org/W2146339022","https://openalex.org/W2157663132","https://openalex.org/W2234938965","https://openalex.org/W2442676454","https://openalex.org/W2594348754","https://openalex.org/W2608190552","https://openalex.org/W2780584018","https://openalex.org/W2897830803","https://openalex.org/W2898200766","https://openalex.org/W2898731714","https://openalex.org/W2923922207","https://openalex.org/W2955033696","https://openalex.org/W2957180077","https://openalex.org/W2964951118","https://openalex.org/W3004052817","https://openalex.org/W3092457419","https://openalex.org/W3092486253","https://openalex.org/W3138507232","https://openalex.org/W3174376470","https://openalex.org/W3179782236","https://openalex.org/W4200351727","https://openalex.org/W4205478771","https://openalex.org/W4286373989","https://openalex.org/W4292263641","https://openalex.org/W4294990936","https://openalex.org/W4296394114","https://openalex.org/W6784425624","https://openalex.org/W6797949017","https://openalex.org/W6840655891"],"related_works":["https://openalex.org/W2158912913","https://openalex.org/W4221011377","https://openalex.org/W2027956742","https://openalex.org/W2924035798","https://openalex.org/W3192072282","https://openalex.org/W2965423738","https://openalex.org/W2796472296","https://openalex.org/W4366421230","https://openalex.org/W2013814485","https://openalex.org/W2111217101"],"abstract_inverted_index":{"piRNA":[0,37,51],"and":[1,10,40,49,151,159],"PIWI":[2],"proteins":[3],"have":[4],"been":[5],"confirmed":[6],"for":[7,53,127],"disease":[8,150],"diagnosis":[9,158],"treatment":[11],"as":[12],"novel":[13,68],"biomarkers":[14],"due":[15],"to":[16,31,46,59,79,89,100],"its":[17,41],"abnormal":[18],"expression":[19],"in":[20,38,98],"various":[21],"cancers.":[22],"However,":[23],"the":[24,34,73,104,112,122,131,134,138,146,149,154],"current":[25],"research":[26,55],"is":[27,77,93],"not":[28],"strong":[29],"enough":[30],"further":[32],"clarify":[33],"functions":[35],"of":[36,119,125,133,148,156],"cancer":[39],"underlying":[42],"mechanism.":[43],"Therefore,":[44],"how":[45],"provide":[47,142],"large-scale":[48],"serious":[50],"candidates":[52],"biological":[54],"has":[56],"grown":[57],"up":[58],"be":[60],"a":[61,67],"pressing":[62],"issue.":[63],"In":[64,103],"this":[65],"study,":[66],"computational":[69],"model":[70],"based":[71],"on":[72,111],"structural":[74],"perturbation":[75],"method":[76],"proposed":[78,135,139],"predict":[80],"potential":[81],"disease-associated":[82],"piRNAs,":[83],"called":[84],"SPRDA.":[85],"Notably,":[86],"SPRDA":[87,107,126],"belongs":[88],"positive-unlabeled":[90],"learning,":[91],"which":[92],"unaffected":[94],"by":[95],"negative":[96],"examples":[97],"contrast":[99],"previous":[101],"approaches.":[102],"5-fold":[105],"cross-validation,":[106],"shows":[108,130],"high":[109],"performance":[110,124],"benchmark":[113],"dataset":[114],"piRDisease,":[115],"with":[116],"an":[117],"AUC":[118],"0.9529.":[120],"Furthermore,":[121],"predictive":[123],"10":[128],"diseases":[129],"robustness":[132],"method.":[136],"Overall,":[137],"approach":[140],"can":[141],"unique":[143],"insights":[144],"into":[145],"pathogenesis":[147],"will":[152],"advance":[153],"field":[155],"oncology":[157],"treatment.":[160]},"counts_by_year":[{"year":2026,"cited_by_count":3},{"year":2025,"cited_by_count":3},{"year":2024,"cited_by_count":24},{"year":2023,"cited_by_count":13},{"year":2022,"cited_by_count":1}],"updated_date":"2026-05-21T06:26:12.895304","created_date":"2025-10-10T00:00:00"}
