{"id":"https://openalex.org/W4310113505","doi":"https://doi.org/10.1093/bib/bbac497","title":"Extraction of microRNA\u2013target interaction sentences from biomedical literature by deep learning approach","display_name":"Extraction of microRNA\u2013target interaction sentences from biomedical literature by deep learning approach","publication_year":2022,"publication_date":"2022-11-27","ids":{"openalex":"https://openalex.org/W4310113505","doi":"https://doi.org/10.1093/bib/bbac497","pmid":"https://pubmed.ncbi.nlm.nih.gov/36440972"},"language":"en","primary_location":{"id":"doi:10.1093/bib/bbac497","is_oa":false,"landing_page_url":"https://doi.org/10.1093/bib/bbac497","pdf_url":null,"source":{"id":"https://openalex.org/S91767247","display_name":"Briefings in Bioinformatics","issn_l":"1467-5463","issn":["1467-5463","1477-4054"],"is_oa":false,"is_in_doaj":true,"is_core":true,"host_organization":"https://openalex.org/P4310311648","host_organization_name":"Oxford University Press","host_organization_lineage":["https://openalex.org/P4310311648","https://openalex.org/P4310311647"],"host_organization_lineage_names":["Oxford University Press","University of Oxford"],"type":"journal"},"license":null,"license_id":null,"version":"publishedVersion","is_accepted":true,"is_published":true,"raw_source_name":"Briefings in Bioinformatics","raw_type":"journal-article"},"type":"article","indexed_in":["crossref","doaj","pubmed"],"open_access":{"is_oa":false,"oa_status":"closed","oa_url":null,"any_repository_has_fulltext":false},"authorships":[{"author_position":"first","author":{"id":"https://openalex.org/A5044245966","display_name":"Mengqi Luo","orcid":"https://orcid.org/0000-0002-6762-6249"},"institutions":[{"id":"https://openalex.org/I126520041","display_name":"University of Science and Technology of China","ror":"https://ror.org/04c4dkn09","country_code":"CN","type":"education","lineage":["https://openalex.org/I126520041","https://openalex.org/I19820366"]},{"id":"https://openalex.org/I4210116924","display_name":"Chinese University of Hong Kong, Shenzhen","ror":"https://ror.org/02d5ks197","country_code":"CN","type":"education","lineage":["https://openalex.org/I177725633","https://openalex.org/I180726961","https://openalex.org/I4210116924"]}],"countries":["CN"],"is_corresponding":false,"raw_author_name":"Mengqi Luo","raw_affiliation_strings":["Warshel Institute for Computational Biology, The Chinese University of Hong Kong, Shenzhen, China; School of Life Sciences, University of Science and Technology of China , Hefei, China","School of Life Sciences, University of Science and Technology of China, Hefei, China"],"raw_orcid":"https://orcid.org/0000-0002-6762-6249","affiliations":[{"raw_affiliation_string":"Warshel Institute for Computational Biology, The Chinese University of Hong Kong, Shenzhen, China; School of Life Sciences, University of Science and Technology of China , Hefei, China","institution_ids":["https://openalex.org/I126520041","https://openalex.org/I4210116924"]},{"raw_affiliation_string":"School of Life Sciences, University of Science and Technology of China, Hefei, China","institution_ids":["https://openalex.org/I126520041"]}]},{"author_position":"middle","author":{"id":"https://openalex.org/A5054157151","display_name":"Shangfu Li","orcid":"https://orcid.org/0000-0002-6211-0251"},"institutions":[{"id":"https://openalex.org/I4210116924","display_name":"Chinese University of Hong Kong, Shenzhen","ror":"https://ror.org/02d5ks197","country_code":"CN","type":"education","lineage":["https://openalex.org/I177725633","https://openalex.org/I180726961","https://openalex.org/I4210116924"]}],"countries":["CN"],"is_corresponding":false,"raw_author_name":"Shangfu Li","raw_affiliation_strings":["Warshel Institute for Computational Biology, The Chinese University of Hong Kong , Shenzhen"],"raw_orcid":null,"affiliations":[{"raw_affiliation_string":"Warshel Institute for Computational Biology, The Chinese University of Hong Kong , Shenzhen","institution_ids":["https://openalex.org/I4210116924"]}]},{"author_position":"middle","author":{"id":"https://openalex.org/A5070743854","display_name":"Yuxuan Pang","orcid":"https://orcid.org/0000-0002-6778-7034"},"institutions":[{"id":"https://openalex.org/I4210116924","display_name":"Chinese University of Hong Kong, Shenzhen","ror":"https://ror.org/02d5ks197","country_code":"CN","type":"education","lineage":["https://openalex.org/I177725633","https://openalex.org/I180726961","https://openalex.org/I4210116924"]}],"countries":["CN"],"is_corresponding":false,"raw_author_name":"Yuxuan Pang","raw_affiliation_strings":["Warshel Institute for Computational Biology, The Chinese University of Hong Kong, Shenzhen, PR China, and also in the School of Science and Engineering, The Chinese University of Hong Kong , Shenzhen, PR China"],"raw_orcid":null,"affiliations":[{"raw_affiliation_string":"Warshel Institute for Computational Biology, The Chinese University of Hong Kong, Shenzhen, PR China, and also in the School of Science and Engineering, The Chinese University of Hong Kong , Shenzhen, PR China","institution_ids":["https://openalex.org/I4210116924"]}]},{"author_position":"middle","author":{"id":"https://openalex.org/A5078222868","display_name":"Lantian Yao","orcid":"https://orcid.org/0000-0003-4554-6827"},"institutions":[{"id":"https://openalex.org/I4210116924","display_name":"Chinese University of Hong Kong, Shenzhen","ror":"https://ror.org/02d5ks197","country_code":"CN","type":"education","lineage":["https://openalex.org/I177725633","https://openalex.org/I180726961","https://openalex.org/I4210116924"]}],"countries":["CN"],"is_corresponding":false,"raw_author_name":"Lantian Yao","raw_affiliation_strings":["Warshel Institute for Computational Biology, The Chinese University of Hong Kong, Shenzhen, PR China, and also in the School of Science and Engineering, The Chinese University of Hong Kong , Shenzhen, PR China"],"raw_orcid":null,"affiliations":[{"raw_affiliation_string":"Warshel Institute for Computational Biology, The Chinese University of Hong Kong, Shenzhen, PR China, and also in the School of Science and Engineering, The Chinese University of Hong Kong , Shenzhen, PR China","institution_ids":["https://openalex.org/I4210116924"]}]},{"author_position":"middle","author":{"id":"https://openalex.org/A5069964937","display_name":"Renfei Ma","orcid":"https://orcid.org/0000-0002-2495-4787"},"institutions":[{"id":"https://openalex.org/I126520041","display_name":"University of Science and Technology of China","ror":"https://ror.org/04c4dkn09","country_code":"CN","type":"education","lineage":["https://openalex.org/I126520041","https://openalex.org/I19820366"]},{"id":"https://openalex.org/I4210116924","display_name":"Chinese University of Hong Kong, Shenzhen","ror":"https://ror.org/02d5ks197","country_code":"CN","type":"education","lineage":["https://openalex.org/I177725633","https://openalex.org/I180726961","https://openalex.org/I4210116924"]}],"countries":["CN"],"is_corresponding":false,"raw_author_name":"Renfei Ma","raw_affiliation_strings":["Warshel Institute for Computational Biology, Chinese University of Hong Kong, Shenzhen; School of Life Sciences, University of Science and Technology of China , Hefei, China","School of Life Sciences, University of Science and Technology of China, Hefei, China"],"raw_orcid":"https://orcid.org/0000-0002-2495-4787","affiliations":[{"raw_affiliation_string":"Warshel Institute for Computational Biology, Chinese University of Hong Kong, Shenzhen; School of Life Sciences, University of Science and Technology of China , Hefei, China","institution_ids":["https://openalex.org/I126520041","https://openalex.org/I4210116924"]},{"raw_affiliation_string":"School of Life Sciences, University of Science and Technology of China, Hefei, China","institution_ids":["https://openalex.org/I126520041"]}]},{"author_position":"middle","author":{"id":"https://openalex.org/A5000615612","display_name":"Hsi\u2010Yuan Huang","orcid":"https://orcid.org/0000-0001-8453-4939"},"institutions":[{"id":"https://openalex.org/I4210116924","display_name":"Chinese University of Hong Kong, Shenzhen","ror":"https://ror.org/02d5ks197","country_code":"CN","type":"education","lineage":["https://openalex.org/I177725633","https://openalex.org/I180726961","https://openalex.org/I4210116924"]}],"countries":["CN"],"is_corresponding":false,"raw_author_name":"Hsi-Yuan Huang","raw_affiliation_strings":["School of Medicine and the Warshel Institute of Computational Biology, The Chinese University of Hong Kong , Shenzhen","School of Medicine, and the executive director of Warshel Institute for Computational Biology, The Chinese University of Hong Kong , Shenzhen"],"raw_orcid":"https://orcid.org/0000-0001-8453-4939","affiliations":[{"raw_affiliation_string":"School of Medicine and the Warshel Institute of Computational Biology, The Chinese University of Hong Kong , Shenzhen","institution_ids":["https://openalex.org/I4210116924"]},{"raw_affiliation_string":"School of Medicine, and the executive director of Warshel Institute for Computational Biology, The Chinese University of Hong Kong , Shenzhen","institution_ids":["https://openalex.org/I4210116924"]}]},{"author_position":"middle","author":{"id":"https://openalex.org/A5000615612","display_name":"Hsi\u2010Yuan Huang","orcid":"https://orcid.org/0000-0001-8453-4939"},"institutions":[{"id":"https://openalex.org/I4210116924","display_name":"Chinese University of Hong Kong, Shenzhen","ror":"https://ror.org/02d5ks197","country_code":"CN","type":"education","lineage":["https://openalex.org/I177725633","https://openalex.org/I180726961","https://openalex.org/I4210116924"]}],"countries":["CN"],"is_corresponding":true,"raw_author_name":"Hsi-Yuan Huang","raw_affiliation_strings":["School of Medicine and the Warshel Institute of Computational Biology, The Chinese University of Hong Kong , Shenzhen","School of Medicine, and the executive director of Warshel Institute for Computational Biology, The Chinese University of Hong Kong , Shenzhen"],"raw_orcid":"https://orcid.org/0000-0001-8453-4939","affiliations":[{"raw_affiliation_string":"School of Medicine and the Warshel Institute of Computational Biology, The Chinese University of Hong Kong , Shenzhen","institution_ids":["https://openalex.org/I4210116924"]},{"raw_affiliation_string":"School of Medicine, and the executive director of Warshel Institute for Computational Biology, The Chinese University of Hong Kong , Shenzhen","institution_ids":["https://openalex.org/I4210116924"]}]},{"author_position":"middle","author":{"id":"https://openalex.org/A5040277769","display_name":"Hsien\u2010Da Huang","orcid":"https://orcid.org/0000-0003-2857-7023"},"institutions":[{"id":"https://openalex.org/I4210116924","display_name":"Chinese University of Hong Kong, Shenzhen","ror":"https://ror.org/02d5ks197","country_code":"CN","type":"education","lineage":["https://openalex.org/I177725633","https://openalex.org/I180726961","https://openalex.org/I4210116924"]}],"countries":["CN"],"is_corresponding":false,"raw_author_name":"Hsien-Da Huang","raw_affiliation_strings":["School of Medicine and the Warshel Institute of Computational Biology, The Chinese University of Hong Kong , Shenzhen","School of Medicine, and the executive director of Warshel Institute for Computational Biology, The Chinese University of Hong Kong , Shenzhen","Warshel Institute for Computational Biology, The Chinese University of Hong Kong , Shenzhen, China"],"raw_orcid":"https://orcid.org/0000-0003-2857-7023","affiliations":[{"raw_affiliation_string":"School of Medicine and the Warshel Institute of Computational Biology, The Chinese University of Hong Kong , Shenzhen","institution_ids":["https://openalex.org/I4210116924"]},{"raw_affiliation_string":"School of Medicine, and the executive director of Warshel Institute for Computational Biology, The Chinese University of Hong Kong , Shenzhen","institution_ids":["https://openalex.org/I4210116924"]},{"raw_affiliation_string":"Warshel Institute for Computational Biology, The Chinese University of Hong Kong , Shenzhen, China","institution_ids":["https://openalex.org/I4210116924"]}]},{"author_position":"middle","author":{"id":"https://openalex.org/A5040277769","display_name":"Hsien\u2010Da Huang","orcid":"https://orcid.org/0000-0003-2857-7023"},"institutions":[{"id":"https://openalex.org/I4210116924","display_name":"Chinese University of Hong Kong, Shenzhen","ror":"https://ror.org/02d5ks197","country_code":"CN","type":"education","lineage":["https://openalex.org/I177725633","https://openalex.org/I180726961","https://openalex.org/I4210116924"]}],"countries":["CN"],"is_corresponding":true,"raw_author_name":"Hsien-Da Huang","raw_affiliation_strings":["School of Medicine and the Warshel Institute of Computational Biology, The Chinese University of Hong Kong , Shenzhen","School of Medicine, and the executive director of Warshel Institute for Computational Biology, The Chinese University of Hong Kong , Shenzhen"],"raw_orcid":"https://orcid.org/0000-0003-2857-7023","affiliations":[{"raw_affiliation_string":"School of Medicine and the Warshel Institute of Computational Biology, The Chinese University of Hong Kong , Shenzhen","institution_ids":["https://openalex.org/I4210116924"]},{"raw_affiliation_string":"School of Medicine, and the executive director of Warshel Institute for Computational Biology, The Chinese University of Hong Kong , Shenzhen","institution_ids":["https://openalex.org/I4210116924"]}]},{"author_position":"last","author":{"id":"https://openalex.org/A5045675277","display_name":"Tzong-Yi Lee","orcid":"https://orcid.org/0000-0001-8475-7868"},"institutions":[{"id":"https://openalex.org/I4210116924","display_name":"Chinese University of Hong Kong, Shenzhen","ror":"https://ror.org/02d5ks197","country_code":"CN","type":"education","lineage":["https://openalex.org/I177725633","https://openalex.org/I180726961","https://openalex.org/I4210116924"]}],"countries":["CN"],"is_corresponding":true,"raw_author_name":"Tzong-Yi Lee","raw_affiliation_strings":["Warshel Institute for Computational Biology, The Chinese University of Hong Kong , Shenzhen, China"],"raw_orcid":"https://orcid.org/0000-0001-8475-7868","affiliations":[{"raw_affiliation_string":"Warshel Institute for Computational Biology, The Chinese University of Hong Kong , Shenzhen, China","institution_ids":["https://openalex.org/I4210116924"]}]}],"institutions":[],"countries_distinct_count":1,"institutions_distinct_count":2,"corresponding_author_ids":["https://openalex.org/A5000615612","https://openalex.org/A5040277769","https://openalex.org/A5045675277"],"corresponding_institution_ids":["https://openalex.org/I4210116924"],"apc_list":{"value":4011,"currency":"USD","value_usd":4011},"apc_paid":null,"fwci":0.5802,"has_fulltext":false,"cited_by_count":5,"citation_normalized_percentile":{"value":0.72222394,"is_in_top_1_percent":false,"is_in_top_10_percent":false},"cited_by_percentile_year":{"min":90,"max":98},"biblio":{"volume":"24","issue":"1","first_page":null,"last_page":null},"is_retracted":false,"is_paratext":false,"is_xpac":false,"primary_topic":{"id":"https://openalex.org/T10028","display_name":"Topic Modeling","score":0.9984999895095825,"subfield":{"id":"https://openalex.org/subfields/1702","display_name":"Artificial Intelligence"},"field":{"id":"https://openalex.org/fields/17","display_name":"Computer Science"},"domain":{"id":"https://openalex.org/domains/3","display_name":"Physical Sciences"}},"topics":[{"id":"https://openalex.org/T10028","display_name":"Topic Modeling","score":0.9984999895095825,"subfield":{"id":"https://openalex.org/subfields/1702","display_name":"Artificial Intelligence"},"field":{"id":"https://openalex.org/fields/17","display_name":"Computer Science"},"domain":{"id":"https://openalex.org/domains/3","display_name":"Physical Sciences"}},{"id":"https://openalex.org/T11710","display_name":"Biomedical Text Mining and Ontologies","score":0.9947999715805054,"subfield":{"id":"https://openalex.org/subfields/1312","display_name":"Molecular Biology"},"field":{"id":"https://openalex.org/fields/13","display_name":"Biochemistry, Genetics and Molecular Biology"},"domain":{"id":"https://openalex.org/domains/1","display_name":"Life Sciences"}},{"id":"https://openalex.org/T12254","display_name":"Machine Learning in Bioinformatics","score":0.9851999878883362,"subfield":{"id":"https://openalex.org/subfields/1312","display_name":"Molecular Biology"},"field":{"id":"https://openalex.org/fields/13","display_name":"Biochemistry, Genetics and Molecular Biology"},"domain":{"id":"https://openalex.org/domains/1","display_name":"Life Sciences"}}],"keywords":[{"id":"https://openalex.org/keywords/computer-science","display_name":"Computer science","score":0.6586952209472656},{"id":"https://openalex.org/keywords/artificial-intelligence","display_name":"Artificial intelligence","score":0.630096971988678},{"id":"https://openalex.org/keywords/deep-learning","display_name":"Deep learning","score":0.5754104852676392},{"id":"https://openalex.org/keywords/natural-language-processing","display_name":"Natural language processing","score":0.5419370532035828},{"id":"https://openalex.org/keywords/extraction","display_name":"Extraction (chemistry)","score":0.5342943072319031},{"id":"https://openalex.org/keywords/microrna","display_name":"microRNA","score":0.5066426396369934},{"id":"https://openalex.org/keywords/chemistry","display_name":"Chemistry","score":0.13323894143104553},{"id":"https://openalex.org/keywords/chromatography","display_name":"Chromatography","score":0.10006418824195862},{"id":"https://openalex.org/keywords/gene","display_name":"Gene","score":0.05363216996192932}],"concepts":[{"id":"https://openalex.org/C41008148","wikidata":"https://www.wikidata.org/wiki/Q21198","display_name":"Computer science","level":0,"score":0.6586952209472656},{"id":"https://openalex.org/C154945302","wikidata":"https://www.wikidata.org/wiki/Q11660","display_name":"Artificial intelligence","level":1,"score":0.630096971988678},{"id":"https://openalex.org/C108583219","wikidata":"https://www.wikidata.org/wiki/Q197536","display_name":"Deep learning","level":2,"score":0.5754104852676392},{"id":"https://openalex.org/C204321447","wikidata":"https://www.wikidata.org/wiki/Q30642","display_name":"Natural language processing","level":1,"score":0.5419370532035828},{"id":"https://openalex.org/C4725764","wikidata":"https://www.wikidata.org/wiki/Q844704","display_name":"Extraction (chemistry)","level":2,"score":0.5342943072319031},{"id":"https://openalex.org/C145059251","wikidata":"https://www.wikidata.org/wiki/Q310899","display_name":"microRNA","level":3,"score":0.5066426396369934},{"id":"https://openalex.org/C185592680","wikidata":"https://www.wikidata.org/wiki/Q2329","display_name":"Chemistry","level":0,"score":0.13323894143104553},{"id":"https://openalex.org/C43617362","wikidata":"https://www.wikidata.org/wiki/Q170050","display_name":"Chromatography","level":1,"score":0.10006418824195862},{"id":"https://openalex.org/C104317684","wikidata":"https://www.wikidata.org/wiki/Q7187","display_name":"Gene","level":2,"score":0.05363216996192932},{"id":"https://openalex.org/C55493867","wikidata":"https://www.wikidata.org/wiki/Q7094","display_name":"Biochemistry","level":1,"score":0.0}],"mesh":[{"descriptor_ui":"D000077321","descriptor_name":"Deep Learning","qualifier_ui":null,"qualifier_name":null,"is_major_topic":true},{"descriptor_ui":"D000077321","descriptor_name":"Deep Learning","qualifier_ui":null,"qualifier_name":null,"is_major_topic":true},{"descriptor_ui":"D000077321","descriptor_name":"Deep Learning","qualifier_ui":null,"qualifier_name":null,"is_major_topic":true},{"descriptor_ui":"D007802","descriptor_name":"Language","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D007802","descriptor_name":"Language","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D007802","descriptor_name":"Language","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D009323","descriptor_name":"Natural Language Processing","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D009323","descriptor_name":"Natural Language Processing","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D009323","descriptor_name":"Natural Language Processing","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D016571","descriptor_name":"Neural Networks, Computer","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D016571","descriptor_name":"Neural Networks, Computer","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D016571","descriptor_name":"Neural Networks, Computer","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D035683","descriptor_name":"MicroRNAs","qualifier_ui":"Q000235","qualifier_name":"genetics","is_major_topic":true},{"descriptor_ui":"D035683","descriptor_name":"MicroRNAs","qualifier_ui":"Q000235","qualifier_name":"genetics","is_major_topic":true},{"descriptor_ui":"D035683","descriptor_name":"MicroRNAs","qualifier_ui":"Q000235","qualifier_name":"genetics","is_major_topic":true}],"locations_count":2,"locations":[{"id":"doi:10.1093/bib/bbac497","is_oa":false,"landing_page_url":"https://doi.org/10.1093/bib/bbac497","pdf_url":null,"source":{"id":"https://openalex.org/S91767247","display_name":"Briefings in Bioinformatics","issn_l":"1467-5463","issn":["1467-5463","1477-4054"],"is_oa":false,"is_in_doaj":true,"is_core":true,"host_organization":"https://openalex.org/P4310311648","host_organization_name":"Oxford University Press","host_organization_lineage":["https://openalex.org/P4310311648","https://openalex.org/P4310311647"],"host_organization_lineage_names":["Oxford University Press","University of Oxford"],"type":"journal"},"license":null,"license_id":null,"version":"publishedVersion","is_accepted":true,"is_published":true,"raw_source_name":"Briefings in Bioinformatics","raw_type":"journal-article"},{"id":"pmid:36440972","is_oa":false,"landing_page_url":"https://pubmed.ncbi.nlm.nih.gov/36440972","pdf_url":null,"source":{"id":"https://openalex.org/S4306525036","display_name":"PubMed","issn_l":null,"issn":null,"is_oa":false,"is_in_doaj":false,"is_core":false,"host_organization":"https://openalex.org/I1299303238","host_organization_name":"National Institutes of Health","host_organization_lineage":["https://openalex.org/I1299303238"],"host_organization_lineage_names":[],"type":"repository"},"license":null,"license_id":null,"version":"publishedVersion","is_accepted":true,"is_published":true,"raw_source_name":"Briefings in bioinformatics","raw_type":null}],"best_oa_location":null,"sustainable_development_goals":[{"display_name":"Quality Education","score":0.6200000047683716,"id":"https://metadata.un.org/sdg/4"}],"awards":[{"id":"https://openalex.org/G287154221","display_name":null,"funder_award_id":"32070659","funder_id":"https://openalex.org/F4320321001","funder_display_name":"National Natural Science Foundation of China"},{"id":"https://openalex.org/G3871479355","display_name":null,"funder_award_id":"2021\u00a0M693090","funder_id":"https://openalex.org/F4320321543","funder_display_name":"China Postdoctoral Science Foundation"}],"funders":[{"id":"https://openalex.org/F4320321001","display_name":"National Natural Science Foundation of China","ror":"https://ror.org/01h0zpd94"},{"id":"https://openalex.org/F4320321543","display_name":"China Postdoctoral Science Foundation","ror":"https://ror.org/0426zh255"}],"has_content":{"pdf":false,"grobid_xml":false},"content_urls":null,"referenced_works_count":57,"referenced_works":["https://openalex.org/W1522301498","https://openalex.org/W2132083787","https://openalex.org/W2255466643","https://openalex.org/W2648802171","https://openalex.org/W2739835834","https://openalex.org/W2765531450","https://openalex.org/W2766140847","https://openalex.org/W2767546566","https://openalex.org/W2768632638","https://openalex.org/W2807927369","https://openalex.org/W2811276814","https://openalex.org/W2863750952","https://openalex.org/W2890546464","https://openalex.org/W2900014058","https://openalex.org/W2902528397","https://openalex.org/W2906230340","https://openalex.org/W2911489562","https://openalex.org/W2936461891","https://openalex.org/W2963025814","https://openalex.org/W2963826396","https://openalex.org/W2964315079","https://openalex.org/W2977683229","https://openalex.org/W2982118667","https://openalex.org/W2993148047","https://openalex.org/W3004541293","https://openalex.org/W3008883277","https://openalex.org/W3009459039","https://openalex.org/W3020931369","https://openalex.org/W3023360076","https://openalex.org/W3024761859","https://openalex.org/W3028004046","https://openalex.org/W3028438438","https://openalex.org/W3033939303","https://openalex.org/W3037979089","https://openalex.org/W3046375318","https://openalex.org/W3047620747","https://openalex.org/W3085755936","https://openalex.org/W3111412136","https://openalex.org/W3112648112","https://openalex.org/W3126360506","https://openalex.org/W3127900628","https://openalex.org/W3128209463","https://openalex.org/W3129548754","https://openalex.org/W3135245391","https://openalex.org/W3187730681","https://openalex.org/W3205095335","https://openalex.org/W3205578968","https://openalex.org/W3213998394","https://openalex.org/W4200043367","https://openalex.org/W4229078492","https://openalex.org/W4281850946","https://openalex.org/W6741777355","https://openalex.org/W6754094619","https://openalex.org/W6782648586","https://openalex.org/W6790650528","https://openalex.org/W6798985855","https://openalex.org/W6802183083"],"related_works":["https://openalex.org/W2731899572","https://openalex.org/W3215138031","https://openalex.org/W3009238340","https://openalex.org/W2939353110","https://openalex.org/W4321369474","https://openalex.org/W4360585206","https://openalex.org/W4285208911","https://openalex.org/W3082895349","https://openalex.org/W4213079790","https://openalex.org/W2248239756"],"abstract_inverted_index":{"MicroRNA":[0],"(miRNA)-target":[1],"interaction":[2],"(MTI)":[3],"plays":[4],"a":[5,51,73,82],"substantial":[6],"role":[7],"in":[8,32,199,209],"various":[9,210],"cell":[10],"activities,":[11],"molecular":[12],"regulations":[13],"and":[14,68,81,115,123,146,155,177,189,228],"physiological":[15],"processes.":[16],"Published":[17],"biomedical":[18,62],"literature":[19],"is":[20,192,213],"the":[21,57,66,87,95,105,130,159,165,216],"carrier":[22],"of":[23,89,94,107,202,218],"high-confidence":[24],"MTI":[25,90,187],"knowledge.":[26],"However,":[27],"digging":[28],"out":[29],"this":[30,44,195],"knowledge":[31],"an":[33,140],"efficient":[34],"manner":[35],"from":[36,111],"large-scale":[37,200],"published":[38],"articles":[39],"remains":[40],"challenging.":[41],"To":[42],"address":[43],"issue,":[45],"we":[46],"were":[47,98],"motivated":[48],"to":[49,61,64],"construct":[50],"deep":[52,74,135,161],"learning-based":[53],"model.":[54],"We":[55],"applied":[56],"pre-trained":[58],"language":[59],"models":[60,97],"text":[63,108],"obtain":[65],"representation,":[67],"subsequently":[69],"fed":[70],"them":[71],"into":[72],"neural":[75,136],"network":[76,137],"with":[77,129,143,222],"gate":[78],"mechanism":[79],"layers":[80],"fully":[83],"connected":[84],"layer":[85],"for":[86,125,215],"extraction":[88],"information":[91],"sentences.":[92],"Performances":[93],"proposed":[96,160],"evaluated":[99],"using":[100],"two":[101],"datasets":[102],"constructed":[103],"on":[104,152,186],"basis":[106],"data":[109,154],"obtained":[110],"miRTarBase.":[112],"The":[113],"validation":[114,153],"test":[116,156],"results":[117],"revealed":[118],"that":[119,194],"incorporating":[120],"both":[121,144],"PubMedBERT":[122],"SciBERT":[124],"sentence":[126],"level":[127],"encoding":[128],"long":[131],"short-term":[132],"memory":[133],"(LSTM)-based":[134],"can":[138,197],"yield":[139],"outstanding":[141],"performance,":[142],"F1":[145],"accuracy":[147],"being":[148],"higher":[149],"than":[150],"80%":[151],"data.":[157],"Additionally,":[158],"learning":[162,168],"method":[163],"outperformed":[164],"following":[166],"machine":[167],"methods:":[169],"random":[170],"forest,":[171],"support":[172],"vector":[173],"machine,":[174],"logistic":[175],"regression":[176],"bidirectional":[178],"LSTM.":[179],"This":[180],"work":[181,196],"would":[182],"greatly":[183],"facilitate":[184],"studies":[185],"analysis":[188],"regulations.":[190],"It":[191],"anticipated":[193],"assist":[198],"screening":[201],"miRNAs,":[203],"thereby":[204],"revealing":[205],"their":[206],"functional":[207],"roles":[208],"diseases,":[211],"which":[212],"important":[214],"development":[217],"highly":[219],"specific":[220],"drugs":[221],"fewer":[223],"side":[224],"effects.":[225],"Source":[226],"code":[227],"corpus":[229],"are":[230],"publicly":[231],"available":[232],"at":[233],"https://github.com/qi29.":[234]},"counts_by_year":[{"year":2024,"cited_by_count":4},{"year":2023,"cited_by_count":1}],"updated_date":"2026-07-25T09:21:30.201066","created_date":"2025-10-10T00:00:00"}
