{"id":"https://openalex.org/W4294376397","doi":"https://doi.org/10.1093/bib/bbac375","title":"PEcnv: accurate and efficient detection of copy number variations of various lengths","display_name":"PEcnv: accurate and efficient detection of copy number variations of various lengths","publication_year":2022,"publication_date":"2022-09-01","ids":{"openalex":"https://openalex.org/W4294376397","doi":"https://doi.org/10.1093/bib/bbac375","pmid":"https://pubmed.ncbi.nlm.nih.gov/36056740"},"language":"en","primary_location":{"id":"doi:10.1093/bib/bbac375","is_oa":true,"landing_page_url":"https://doi.org/10.1093/bib/bbac375","pdf_url":"https://academic.oup.com/bib/article-pdf/23/5/bbac375/45936840/bbac375.pdf","source":{"id":"https://openalex.org/S91767247","display_name":"Briefings in Bioinformatics","issn_l":"1467-5463","issn":["1467-5463","1477-4054"],"is_oa":false,"is_in_doaj":true,"is_core":true,"host_organization":"https://openalex.org/P4310311648","host_organization_name":"Oxford University Press","host_organization_lineage":["https://openalex.org/P4310311648","https://openalex.org/P4310311647"],"host_organization_lineage_names":["Oxford University Press","University of Oxford"],"type":"journal"},"license":"cc-by-nc","license_id":"https://openalex.org/licenses/cc-by-nc","version":"publishedVersion","is_accepted":true,"is_published":true,"raw_source_name":"Briefings in Bioinformatics","raw_type":"journal-article"},"type":"article","indexed_in":["crossref","doaj","pubmed"],"open_access":{"is_oa":true,"oa_status":"hybrid","oa_url":"https://academic.oup.com/bib/article-pdf/23/5/bbac375/45936840/bbac375.pdf","any_repository_has_fulltext":true},"authorships":[{"author_position":"first","author":{"id":"https://openalex.org/A5054657033","display_name":"Xuwen Wang","orcid":"https://orcid.org/0000-0003-3022-6513"},"institutions":[{"id":"https://openalex.org/I87445476","display_name":"Xi'an Jiaotong University","ror":"https://ror.org/017zhmm22","country_code":"CN","type":"education","lineage":["https://openalex.org/I87445476"]}],"countries":["CN"],"is_corresponding":false,"raw_author_name":"Xuwen Wang","raw_affiliation_strings":["Department of Computer Science and Technology, School of Electronics and Information Engineering, Xi\u2019an Jiaotong University , Xi\u2019an 710049, China","Institute of Data Science and Information Quality, Shaanxi Engineering Research Center of Medical and Health Big Data, Xi\u2019an Jiaotong University , Xi\u2019an 710049, China"],"affiliations":[{"raw_affiliation_string":"Department of Computer Science and Technology, School of Electronics and Information Engineering, Xi\u2019an Jiaotong University , Xi\u2019an 710049, China","institution_ids":["https://openalex.org/I87445476"]},{"raw_affiliation_string":"Institute of Data Science and Information Quality, Shaanxi Engineering Research Center of Medical and Health Big Data, Xi\u2019an Jiaotong University , Xi\u2019an 710049, China","institution_ids":["https://openalex.org/I87445476"]}]},{"author_position":"middle","author":{"id":"https://openalex.org/A5102815586","display_name":"Ying Xu","orcid":"https://orcid.org/0000-0003-4211-4156"},"institutions":[{"id":"https://openalex.org/I87445476","display_name":"Xi'an Jiaotong University","ror":"https://ror.org/017zhmm22","country_code":"CN","type":"education","lineage":["https://openalex.org/I87445476"]}],"countries":["CN"],"is_corresponding":false,"raw_author_name":"Ying Xu","raw_affiliation_strings":["Department of Computer Science and Technology, School of Electronics and Information Engineering, Xi\u2019an Jiaotong University , Xi\u2019an 710049, China","Institute of Data Science and Information Quality, Shaanxi Engineering Research Center of Medical and Health Big Data, Xi\u2019an Jiaotong University , Xi\u2019an 710049, China"],"affiliations":[{"raw_affiliation_string":"Department of Computer Science and Technology, School of Electronics and Information Engineering, Xi\u2019an Jiaotong University , Xi\u2019an 710049, China","institution_ids":["https://openalex.org/I87445476"]},{"raw_affiliation_string":"Institute of Data Science and Information Quality, Shaanxi Engineering Research Center of Medical and Health Big Data, Xi\u2019an Jiaotong University , Xi\u2019an 710049, China","institution_ids":["https://openalex.org/I87445476"]}]},{"author_position":"middle","author":{"id":"https://openalex.org/A5021908470","display_name":"R. Liu","orcid":"https://orcid.org/0000-0003-0853-9863"},"institutions":[{"id":"https://openalex.org/I87445476","display_name":"Xi'an Jiaotong University","ror":"https://ror.org/017zhmm22","country_code":"CN","type":"education","lineage":["https://openalex.org/I87445476"]}],"countries":["CN"],"is_corresponding":false,"raw_author_name":"Ruoyu Liu","raw_affiliation_strings":["Department of Computer Science and Technology, School of Electronics and Information Engineering, Xi\u2019an Jiaotong University , Xi\u2019an 710049, China","Institute of Data Science and Information Quality, Shaanxi Engineering Research Center of Medical and Health Big Data, Xi\u2019an Jiaotong University , Xi\u2019an 710049, China"],"affiliations":[{"raw_affiliation_string":"Department of Computer Science and Technology, School of Electronics and Information Engineering, Xi\u2019an Jiaotong University , Xi\u2019an 710049, China","institution_ids":["https://openalex.org/I87445476"]},{"raw_affiliation_string":"Institute of Data Science and Information Quality, Shaanxi Engineering Research Center of Medical and Health Big Data, Xi\u2019an Jiaotong University , Xi\u2019an 710049, China","institution_ids":["https://openalex.org/I87445476"]}]},{"author_position":"middle","author":{"id":"https://openalex.org/A5047344339","display_name":"Xin Lai","orcid":"https://orcid.org/0000-0003-3850-5680"},"institutions":[{"id":"https://openalex.org/I87445476","display_name":"Xi'an Jiaotong University","ror":"https://ror.org/017zhmm22","country_code":"CN","type":"education","lineage":["https://openalex.org/I87445476"]}],"countries":["CN"],"is_corresponding":false,"raw_author_name":"Xin Lai","raw_affiliation_strings":["Department of Computer Science and Technology, School of Electronics and Information Engineering, Xi\u2019an Jiaotong University , Xi\u2019an 710049, China","Institute of Data Science and Information Quality, Shaanxi Engineering Research Center of Medical and Health Big Data, Xi\u2019an Jiaotong University , Xi\u2019an 710049, China"],"affiliations":[{"raw_affiliation_string":"Department of Computer Science and Technology, School of Electronics and Information Engineering, Xi\u2019an Jiaotong University , Xi\u2019an 710049, China","institution_ids":["https://openalex.org/I87445476"]},{"raw_affiliation_string":"Institute of Data Science and Information Quality, Shaanxi Engineering Research Center of Medical and Health Big Data, Xi\u2019an Jiaotong University , Xi\u2019an 710049, China","institution_ids":["https://openalex.org/I87445476"]}]},{"author_position":"middle","author":{"id":"https://openalex.org/A5088818118","display_name":"Yuqian Liu","orcid":"https://orcid.org/0000-0001-8536-0854"},"institutions":[{"id":"https://openalex.org/I87445476","display_name":"Xi'an Jiaotong University","ror":"https://ror.org/017zhmm22","country_code":"CN","type":"education","lineage":["https://openalex.org/I87445476"]}],"countries":["CN"],"is_corresponding":false,"raw_author_name":"Yuqian Liu","raw_affiliation_strings":["Department of Computer Science and Technology, School of Electronics and Information Engineering, Xi\u2019an Jiaotong University , Xi\u2019an 710049, China","Institute of Data Science and Information Quality, Shaanxi Engineering Research Center of Medical and Health Big Data, Xi\u2019an Jiaotong University , Xi\u2019an 710049, China"],"affiliations":[{"raw_affiliation_string":"Department of Computer Science and Technology, School of Electronics and Information Engineering, Xi\u2019an Jiaotong University , Xi\u2019an 710049, China","institution_ids":["https://openalex.org/I87445476"]},{"raw_affiliation_string":"Institute of Data Science and Information Quality, Shaanxi Engineering Research Center of Medical and Health Big Data, Xi\u2019an Jiaotong University , Xi\u2019an 710049, China","institution_ids":["https://openalex.org/I87445476"]}]},{"author_position":"middle","author":{"id":"https://openalex.org/A5115694725","display_name":"Shenjie Wang","orcid":null},"institutions":[{"id":"https://openalex.org/I87445476","display_name":"Xi'an Jiaotong University","ror":"https://ror.org/017zhmm22","country_code":"CN","type":"education","lineage":["https://openalex.org/I87445476"]}],"countries":["CN"],"is_corresponding":false,"raw_author_name":"Shenjie Wang","raw_affiliation_strings":["Department of Computer Science and Technology, School of Electronics and Information Engineering, Xi\u2019an Jiaotong University , Xi\u2019an 710049, China","Institute of Data Science and Information Quality, Shaanxi Engineering Research Center of Medical and Health Big Data, Xi\u2019an Jiaotong University , Xi\u2019an 710049, China"],"affiliations":[{"raw_affiliation_string":"Department of Computer Science and Technology, School of Electronics and Information Engineering, Xi\u2019an Jiaotong University , Xi\u2019an 710049, China","institution_ids":["https://openalex.org/I87445476"]},{"raw_affiliation_string":"Institute of Data Science and Information Quality, Shaanxi Engineering Research Center of Medical and Health Big Data, Xi\u2019an Jiaotong University , Xi\u2019an 710049, China","institution_ids":["https://openalex.org/I87445476"]}]},{"author_position":"middle","author":{"id":"https://openalex.org/A5115594780","display_name":"Xuanping Zhang","orcid":null},"institutions":[{"id":"https://openalex.org/I87445476","display_name":"Xi'an Jiaotong University","ror":"https://ror.org/017zhmm22","country_code":"CN","type":"education","lineage":["https://openalex.org/I87445476"]}],"countries":["CN"],"is_corresponding":false,"raw_author_name":"Xuanping Zhang","raw_affiliation_strings":["Department of Computer Science and Technology, School of Electronics and Information Engineering, Xi\u2019an Jiaotong University , Xi\u2019an 710049, China","Institute of Data Science and Information Quality, Shaanxi Engineering Research Center of Medical and Health Big Data, Xi\u2019an Jiaotong University , Xi\u2019an 710049, China"],"affiliations":[{"raw_affiliation_string":"Department of Computer Science and Technology, School of Electronics and Information Engineering, Xi\u2019an Jiaotong University , Xi\u2019an 710049, China","institution_ids":["https://openalex.org/I87445476"]},{"raw_affiliation_string":"Institute of Data Science and Information Quality, Shaanxi Engineering Research Center of Medical and Health Big Data, Xi\u2019an Jiaotong University , Xi\u2019an 710049, China","institution_ids":["https://openalex.org/I87445476"]}]},{"author_position":"last","author":{"id":"https://openalex.org/A5027360778","display_name":"Jiayin Wang","orcid":"https://orcid.org/0000-0002-3862-6557"},"institutions":[{"id":"https://openalex.org/I87445476","display_name":"Xi'an Jiaotong University","ror":"https://ror.org/017zhmm22","country_code":"CN","type":"education","lineage":["https://openalex.org/I87445476"]}],"countries":["CN"],"is_corresponding":true,"raw_author_name":"Jiayin Wang","raw_affiliation_strings":["Department of Computer Science and Technology, School of Electronics and Information Engineering, Xi\u2019an Jiaotong University , Xi\u2019an 710049, China","Institute of Data Science and Information Quality, Shaanxi Engineering Research Center of Medical and Health Big Data, Xi\u2019an Jiaotong University , Xi\u2019an 710049, China"],"affiliations":[{"raw_affiliation_string":"Department of Computer Science and Technology, School of Electronics and Information Engineering, Xi\u2019an Jiaotong University , Xi\u2019an 710049, China","institution_ids":["https://openalex.org/I87445476"]},{"raw_affiliation_string":"Institute of Data Science and Information Quality, Shaanxi Engineering Research Center of Medical and Health Big Data, Xi\u2019an Jiaotong University , Xi\u2019an 710049, China","institution_ids":["https://openalex.org/I87445476"]}]}],"institutions":[],"countries_distinct_count":1,"institutions_distinct_count":8,"corresponding_author_ids":["https://openalex.org/A5027360778"],"corresponding_institution_ids":["https://openalex.org/I87445476"],"apc_list":{"value":4011,"currency":"USD","value_usd":4011},"apc_paid":{"value":4011,"currency":"USD","value_usd":4011},"fwci":2.8034,"has_fulltext":true,"cited_by_count":16,"citation_normalized_percentile":{"value":0.91094681,"is_in_top_1_percent":false,"is_in_top_10_percent":true},"cited_by_percentile_year":{"min":96,"max":99},"biblio":{"volume":"23","issue":"5","first_page":null,"last_page":null},"is_retracted":false,"is_paratext":false,"is_xpac":false,"primary_topic":{"id":"https://openalex.org/T11213","display_name":"Genomic variations and chromosomal abnormalities","score":0.9994999766349792,"subfield":{"id":"https://openalex.org/subfields/1311","display_name":"Genetics"},"field":{"id":"https://openalex.org/fields/13","display_name":"Biochemistry, Genetics and Molecular Biology"},"domain":{"id":"https://openalex.org/domains/1","display_name":"Life Sciences"}},"topics":[{"id":"https://openalex.org/T11213","display_name":"Genomic variations and chromosomal abnormalities","score":0.9994999766349792,"subfield":{"id":"https://openalex.org/subfields/1311","display_name":"Genetics"},"field":{"id":"https://openalex.org/fields/13","display_name":"Biochemistry, Genetics and Molecular Biology"},"domain":{"id":"https://openalex.org/domains/1","display_name":"Life Sciences"}},{"id":"https://openalex.org/T11287","display_name":"Cancer Genomics and Diagnostics","score":0.9843999743461609,"subfield":{"id":"https://openalex.org/subfields/1306","display_name":"Cancer Research"},"field":{"id":"https://openalex.org/fields/13","display_name":"Biochemistry, Genetics and Molecular Biology"},"domain":{"id":"https://openalex.org/domains/1","display_name":"Life Sciences"}},{"id":"https://openalex.org/T10015","display_name":"Genomics and Phylogenetic Studies","score":0.9805999994277954,"subfield":{"id":"https://openalex.org/subfields/1312","display_name":"Molecular Biology"},"field":{"id":"https://openalex.org/fields/13","display_name":"Biochemistry, Genetics and Molecular Biology"},"domain":{"id":"https://openalex.org/domains/1","display_name":"Life Sciences"}}],"keywords":[{"id":"https://openalex.org/keywords/computer-science","display_name":"Computer science","score":0.5312252640724182},{"id":"https://openalex.org/keywords/algorithm","display_name":"Algorithm","score":0.33369871973991394}],"concepts":[{"id":"https://openalex.org/C41008148","wikidata":"https://www.wikidata.org/wiki/Q21198","display_name":"Computer science","level":0,"score":0.5312252640724182},{"id":"https://openalex.org/C11413529","wikidata":"https://www.wikidata.org/wiki/Q8366","display_name":"Algorithm","level":1,"score":0.33369871973991394}],"mesh":[{"descriptor_ui":"D000465","descriptor_name":"Algorithms","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D000465","descriptor_name":"Algorithms","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D000465","descriptor_name":"Algorithms","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D012984","descriptor_name":"Software","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D012984","descriptor_name":"Software","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D012984","descriptor_name":"Software","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D019295","descriptor_name":"Computational Biology","qualifier_ui":"Q000379","qualifier_name":"methods","is_major_topic":false},{"descriptor_ui":"D019295","descriptor_name":"Computational Biology","qualifier_ui":"Q000379","qualifier_name":"methods","is_major_topic":false},{"descriptor_ui":"D019295","descriptor_name":"Computational Biology","qualifier_ui":"Q000379","qualifier_name":"methods","is_major_topic":false},{"descriptor_ui":"D056915","descriptor_name":"DNA Copy Number Variations","qualifier_ui":null,"qualifier_name":null,"is_major_topic":true},{"descriptor_ui":"D056915","descriptor_name":"DNA Copy Number Variations","qualifier_ui":null,"qualifier_name":null,"is_major_topic":true},{"descriptor_ui":"D056915","descriptor_name":"DNA Copy Number Variations","qualifier_ui":null,"qualifier_name":null,"is_major_topic":true},{"descriptor_ui":"D059014","descriptor_name":"High-Throughput Nucleotide Sequencing","qualifier_ui":"Q000379","qualifier_name":"methods","is_major_topic":true},{"descriptor_ui":"D059014","descriptor_name":"High-Throughput Nucleotide Sequencing","qualifier_ui":"Q000379","qualifier_name":"methods","is_major_topic":true},{"descriptor_ui":"D059014","descriptor_name":"High-Throughput Nucleotide Sequencing","qualifier_ui":"Q000379","qualifier_name":"methods","is_major_topic":true}],"locations_count":3,"locations":[{"id":"doi:10.1093/bib/bbac375","is_oa":true,"landing_page_url":"https://doi.org/10.1093/bib/bbac375","pdf_url":"https://academic.oup.com/bib/article-pdf/23/5/bbac375/45936840/bbac375.pdf","source":{"id":"https://openalex.org/S91767247","display_name":"Briefings in Bioinformatics","issn_l":"1467-5463","issn":["1467-5463","1477-4054"],"is_oa":false,"is_in_doaj":true,"is_core":true,"host_organization":"https://openalex.org/P4310311648","host_organization_name":"Oxford University Press","host_organization_lineage":["https://openalex.org/P4310311648","https://openalex.org/P4310311647"],"host_organization_lineage_names":["Oxford University Press","University of Oxford"],"type":"journal"},"license":"cc-by-nc","license_id":"https://openalex.org/licenses/cc-by-nc","version":"publishedVersion","is_accepted":true,"is_published":true,"raw_source_name":"Briefings in Bioinformatics","raw_type":"journal-article"},{"id":"pmid:36056740","is_oa":false,"landing_page_url":"https://pubmed.ncbi.nlm.nih.gov/36056740","pdf_url":null,"source":{"id":"https://openalex.org/S4306525036","display_name":"PubMed","issn_l":null,"issn":null,"is_oa":false,"is_in_doaj":false,"is_core":false,"host_organization":"https://openalex.org/I1299303238","host_organization_name":"National Institutes of Health","host_organization_lineage":["https://openalex.org/I1299303238"],"host_organization_lineage_names":[],"type":"repository"},"license":null,"license_id":null,"version":"publishedVersion","is_accepted":true,"is_published":true,"raw_source_name":"Briefings in bioinformatics","raw_type":null},{"id":"pmh:oai:pubmedcentral.nih.gov:9487654","is_oa":true,"landing_page_url":"https://www.ncbi.nlm.nih.gov/pmc/articles/9487654","pdf_url":null,"source":{"id":"https://openalex.org/S2764455111","display_name":"PubMed Central","issn_l":null,"issn":null,"is_oa":false,"is_in_doaj":false,"is_core":false,"host_organization":"https://openalex.org/I1299303238","host_organization_name":"National Institutes of Health","host_organization_lineage":["https://openalex.org/I1299303238"],"host_organization_lineage_names":[],"type":"repository"},"license":"other-oa","license_id":"https://openalex.org/licenses/other-oa","version":"submittedVersion","is_accepted":false,"is_published":false,"raw_source_name":"Brief Bioinform","raw_type":"Text"}],"best_oa_location":{"id":"doi:10.1093/bib/bbac375","is_oa":true,"landing_page_url":"https://doi.org/10.1093/bib/bbac375","pdf_url":"https://academic.oup.com/bib/article-pdf/23/5/bbac375/45936840/bbac375.pdf","source":{"id":"https://openalex.org/S91767247","display_name":"Briefings in Bioinformatics","issn_l":"1467-5463","issn":["1467-5463","1477-4054"],"is_oa":false,"is_in_doaj":true,"is_core":true,"host_organization":"https://openalex.org/P4310311648","host_organization_name":"Oxford University Press","host_organization_lineage":["https://openalex.org/P4310311648","https://openalex.org/P4310311647"],"host_organization_lineage_names":["Oxford University Press","University of Oxford"],"type":"journal"},"license":"cc-by-nc","license_id":"https://openalex.org/licenses/cc-by-nc","version":"publishedVersion","is_accepted":true,"is_published":true,"raw_source_name":"Briefings in Bioinformatics","raw_type":"journal-article"},"sustainable_development_goals":[],"awards":[],"funders":[],"has_content":{"pdf":true,"grobid_xml":true},"content_urls":{"pdf":"https://content.openalex.org/works/W4294376397.pdf","grobid_xml":"https://content.openalex.org/works/W4294376397.grobid-xml"},"referenced_works_count":40,"referenced_works":["https://openalex.org/W1905244645","https://openalex.org/W1965856472","https://openalex.org/W1968206926","https://openalex.org/W2006085234","https://openalex.org/W2012151892","https://openalex.org/W2021714239","https://openalex.org/W2022385074","https://openalex.org/W2025034087","https://openalex.org/W2030043856","https://openalex.org/W2038840669","https://openalex.org/W2060084956","https://openalex.org/W2065641910","https://openalex.org/W2086302634","https://openalex.org/W2102941013","https://openalex.org/W2106862106","https://openalex.org/W2107126369","https://openalex.org/W2108234281","https://openalex.org/W2115783720","https://openalex.org/W2124896761","https://openalex.org/W2131088968","https://openalex.org/W2155707112","https://openalex.org/W2168713159","https://openalex.org/W2169744057","https://openalex.org/W2169964199","https://openalex.org/W2337209831","https://openalex.org/W2338102768","https://openalex.org/W2405513305","https://openalex.org/W2617530335","https://openalex.org/W2765185461","https://openalex.org/W2915553291","https://openalex.org/W3011792666","https://openalex.org/W3012203069","https://openalex.org/W3089768241","https://openalex.org/W3194965953","https://openalex.org/W4213201562","https://openalex.org/W4229980202","https://openalex.org/W4285721697","https://openalex.org/W6639809218","https://openalex.org/W6661500995","https://openalex.org/W6665808111"],"related_works":["https://openalex.org/W2748952813","https://openalex.org/W2051487156","https://openalex.org/W2073681303","https://openalex.org/W2390279801","https://openalex.org/W2358668433","https://openalex.org/W2376932109","https://openalex.org/W2001405890","https://openalex.org/W2382290278","https://openalex.org/W2478288626","https://openalex.org/W2350741829"],"abstract_inverted_index":{"Copy":[0],"number":[1],"variation":[2],"(CNV)":[3],"is":[4,21,47,100,110,212,221],"a":[5,22,27,72,104,120],"class":[6],"of":[7,95,97],"key":[8],"biomarkers":[9],"in":[10,30,177,184,206],"many":[11,34],"complex":[12],"traits":[13],"and":[14,26,63,68,135,160,217],"diseases.":[15],"Detecting":[16],"CNV":[17,36],"from":[18,147],"sequencing":[19,186,211],"data":[20],"substantial":[23],"bioinformatics":[24],"problem":[25],"standard":[28],"requirement":[29],"clinical":[31,207],"practice.":[32],"Although":[33],"proposed":[35],"detection":[37,94],"approaches":[38],"exist,":[39],"the":[40,56,60,114,127,191,213],"core":[41],"statistical":[42,73],"model":[43,75,153],"at":[44,224],"their":[45],"foundation":[46],"weakened":[48],"by":[49,80,103,126,194],"two":[50],"critical":[51],"computational":[52],"issues:":[53],"(i)":[54],"identifying":[55],"optimal":[57],"setting":[58],"on":[59,198],"sliding":[61,106],"window":[62],"(ii)":[64],"correcting":[65],"for":[66],"bias":[67],"noise.":[69],"We":[70,117],"designed":[71,119],"process":[74],"to":[76,113,149],"overcome":[77],"these":[78],"limitations":[79],"calculating":[81],"regional":[82],"read":[83],"depths":[84],"via":[85],"an":[86],"exponentially":[87],"weighted":[88,115],"moving":[89,128],"average":[90],"strategy.":[91,215],"A":[92],"one-run":[93],"CNVs":[96,145,180],"various":[98],"lengths":[99],"then":[101],"achieved":[102],"dynamic":[105],"window,":[107],"whose":[108],"size":[109],"self-adopted":[111],"according":[112],"averages.":[116],"also":[118],"novel":[121],"bias/noise":[122],"reduction":[123],"model,":[124,140],"accompanied":[125],"average,":[129],"which":[130],"can":[131],"handle":[132],"complicated":[133],"patterns":[134],"extend":[136],"training":[137],"data.":[138,187],"This":[139],"called":[141],"PEcnv,":[142],"accurately":[143],"detects":[144],"ranging":[146],"kb-scale":[148],"chromosome-arm":[150],"level.":[151],"The":[152],"performance":[154],"was":[155],"validated":[156],"with":[157],"simulation":[158],"samples":[159],"real":[161],"samples.":[162],"Comparative":[163],"analysis":[164],"showed":[165],"that":[166],"PEcnv":[167,173,189,201],"outperforms":[168],"current":[169],"popular":[170],"approaches.":[171],"Notably,":[172],"provided":[174],"considerable":[175],"advantages":[176],"detecting":[178],"small":[179],"(1":[181],"kb-1":[182],"Mb)":[183],"panel":[185,210],"Thus,":[188],"fills":[190],"gap":[192],"left":[193],"existing":[195],"methods":[196],"focusing":[197],"large":[199],"CNVs.":[200],"may":[202],"have":[203],"broad":[204],"applications":[205],"testing":[208],"where":[209],"dominant":[214],"Availability":[216],"implementation:":[218],"Source":[219],"code":[220],"freely":[222],"available":[223],"https://github.com/Sherwin-xjtu/PEcnv.":[225]},"counts_by_year":[{"year":2026,"cited_by_count":1},{"year":2025,"cited_by_count":8},{"year":2024,"cited_by_count":4},{"year":2023,"cited_by_count":3}],"updated_date":"2026-03-23T07:41:27.035349","created_date":"2025-10-10T00:00:00"}
