{"id":"https://openalex.org/W4284885310","doi":"https://doi.org/10.1093/bib/bbac274","title":"Evaluation of different computational methods for DNA methylation-based biological age","display_name":"Evaluation of different computational methods for DNA methylation-based biological age","publication_year":2022,"publication_date":"2022-07-06","ids":{"openalex":"https://openalex.org/W4284885310","doi":"https://doi.org/10.1093/bib/bbac274","pmid":"https://pubmed.ncbi.nlm.nih.gov/35794713"},"language":"en","primary_location":{"id":"doi:10.1093/bib/bbac274","is_oa":false,"landing_page_url":"https://doi.org/10.1093/bib/bbac274","pdf_url":null,"source":{"id":"https://openalex.org/S91767247","display_name":"Briefings in Bioinformatics","issn_l":"1467-5463","issn":["1467-5463","1477-4054"],"is_oa":false,"is_in_doaj":true,"is_core":true,"host_organization":"https://openalex.org/P4310311648","host_organization_name":"Oxford University Press","host_organization_lineage":["https://openalex.org/P4310311648","https://openalex.org/P4310311647"],"host_organization_lineage_names":["Oxford University Press","University of Oxford"],"type":"journal"},"license":null,"license_id":null,"version":"publishedVersion","is_accepted":true,"is_published":true,"raw_source_name":"Briefings in Bioinformatics","raw_type":"journal-article"},"type":"review","indexed_in":["crossref","doaj","pubmed"],"open_access":{"is_oa":true,"oa_status":"green","oa_url":"https://academic.oup.com/bib/article/23/4/bbac274/6632619","any_repository_has_fulltext":true},"authorships":[{"author_position":"first","author":{"id":"https://openalex.org/A5055593623","display_name":"Pietro Di Lena","orcid":"https://orcid.org/0000-0002-1838-8918"},"institutions":[{"id":"https://openalex.org/I4210146975","display_name":"Zambon (Italy)","ror":"https://ror.org/04zzq8d03","country_code":"IT","type":"company","lineage":["https://openalex.org/I4210146975"]},{"id":"https://openalex.org/I9360294","display_name":"University of Bologna","ror":"https://ror.org/01111rn36","country_code":"IT","type":"education","lineage":["https://openalex.org/I9360294"]}],"countries":["IT"],"is_corresponding":true,"raw_author_name":"Pietro Di Lena","raw_affiliation_strings":["Department of Computer Science and Engineering , University of Bologna, Mura Anteo Zamboni 7, 40126 Bologna , Italy"],"affiliations":[{"raw_affiliation_string":"Department of Computer Science and Engineering , University of Bologna, Mura Anteo Zamboni 7, 40126 Bologna , Italy","institution_ids":["https://openalex.org/I9360294","https://openalex.org/I4210146975"]}]},{"author_position":"middle","author":{"id":"https://openalex.org/A5039371771","display_name":"Claudia Sala","orcid":"https://orcid.org/0000-0002-4889-1047"},"institutions":[{"id":"https://openalex.org/I9360294","display_name":"University of Bologna","ror":"https://ror.org/01111rn36","country_code":"IT","type":"education","lineage":["https://openalex.org/I9360294"]}],"countries":["IT"],"is_corresponding":false,"raw_author_name":"Claudia Sala","raw_affiliation_strings":["Department of Experimental , Diagnostic and Specialty Medicine, University of Bologna, Via Massarenti 9, 40138, Bologna , Italy"],"affiliations":[{"raw_affiliation_string":"Department of Experimental , Diagnostic and Specialty Medicine, University of Bologna, Via Massarenti 9, 40138, Bologna , Italy","institution_ids":["https://openalex.org/I9360294"]}]},{"author_position":"last","author":{"id":"https://openalex.org/A5081542076","display_name":"Christine Nardini","orcid":"https://orcid.org/0000-0001-7601-321X"},"institutions":[{"id":"https://openalex.org/I4210106125","display_name":"Istituto per le Applicazioni del Calcolo Mauro Picone","ror":"https://ror.org/00ygy3d85","country_code":"IT","type":"facility","lineage":["https://openalex.org/I4210106125","https://openalex.org/I4210155236"]}],"countries":["IT"],"is_corresponding":false,"raw_author_name":"Christine Nardini","raw_affiliation_strings":["CNR IAC \u201dMauro Picone\u201d , CNR, Via dei Taurini 19, 00185, Rome , Italy"],"affiliations":[{"raw_affiliation_string":"CNR IAC \u201dMauro Picone\u201d , CNR, Via dei Taurini 19, 00185, Rome , Italy","institution_ids":["https://openalex.org/I4210106125"]}]}],"institutions":[],"countries_distinct_count":1,"institutions_distinct_count":3,"corresponding_author_ids":["https://openalex.org/A5055593623"],"corresponding_institution_ids":["https://openalex.org/I4210146975","https://openalex.org/I9360294"],"apc_list":{"value":4011,"currency":"USD","value_usd":4011},"apc_paid":null,"fwci":0.9436,"has_fulltext":false,"cited_by_count":9,"citation_normalized_percentile":{"value":0.72799496,"is_in_top_1_percent":false,"is_in_top_10_percent":false},"cited_by_percentile_year":{"min":95,"max":97},"biblio":{"volume":"23","issue":"4","first_page":null,"last_page":null},"is_retracted":false,"is_paratext":false,"is_xpac":false,"primary_topic":{"id":"https://openalex.org/T10269","display_name":"Epigenetics and DNA Methylation","score":0.9994000196456909,"subfield":{"id":"https://openalex.org/subfields/1312","display_name":"Molecular Biology"},"field":{"id":"https://openalex.org/fields/13","display_name":"Biochemistry, Genetics and Molecular Biology"},"domain":{"id":"https://openalex.org/domains/1","display_name":"Life Sciences"}},"topics":[{"id":"https://openalex.org/T10269","display_name":"Epigenetics and DNA Methylation","score":0.9994000196456909,"subfield":{"id":"https://openalex.org/subfields/1312","display_name":"Molecular Biology"},"field":{"id":"https://openalex.org/fields/13","display_name":"Biochemistry, Genetics and Molecular Biology"},"domain":{"id":"https://openalex.org/domains/1","display_name":"Life Sciences"}},{"id":"https://openalex.org/T10444","display_name":"Context-Aware Activity Recognition Systems","score":0.9036999940872192,"subfield":{"id":"https://openalex.org/subfields/1707","display_name":"Computer Vision and Pattern Recognition"},"field":{"id":"https://openalex.org/fields/17","display_name":"Computer Science"},"domain":{"id":"https://openalex.org/domains/3","display_name":"Physical Sciences"}}],"keywords":[{"id":"https://openalex.org/keywords/biological-age","display_name":"Biological age","score":0.7784348726272583},{"id":"https://openalex.org/keywords/dna-methylation","display_name":"DNA methylation","score":0.6640303134918213},{"id":"https://openalex.org/keywords/epigenetics","display_name":"Epigenetics","score":0.6550662517547607},{"id":"https://openalex.org/keywords/computer-science","display_name":"Computer science","score":0.5267887711524963},{"id":"https://openalex.org/keywords/computational-biology","display_name":"Computational biology","score":0.3934510350227356},{"id":"https://openalex.org/keywords/bioinformatics","display_name":"Bioinformatics","score":0.3450591564178467},{"id":"https://openalex.org/keywords/biology","display_name":"Biology","score":0.3056125044822693},{"id":"https://openalex.org/keywords/evolutionary-biology","display_name":"Evolutionary biology","score":0.18177127838134766},{"id":"https://openalex.org/keywords/genetics","display_name":"Genetics","score":0.13231778144836426}],"concepts":[{"id":"https://openalex.org/C2991747559","wikidata":"https://www.wikidata.org/wiki/Q4915075","display_name":"Biological age","level":2,"score":0.7784348726272583},{"id":"https://openalex.org/C190727270","wikidata":"https://www.wikidata.org/wiki/Q874745","display_name":"DNA methylation","level":4,"score":0.6640303134918213},{"id":"https://openalex.org/C41091548","wikidata":"https://www.wikidata.org/wiki/Q26939","display_name":"Epigenetics","level":3,"score":0.6550662517547607},{"id":"https://openalex.org/C41008148","wikidata":"https://www.wikidata.org/wiki/Q21198","display_name":"Computer science","level":0,"score":0.5267887711524963},{"id":"https://openalex.org/C70721500","wikidata":"https://www.wikidata.org/wiki/Q177005","display_name":"Computational biology","level":1,"score":0.3934510350227356},{"id":"https://openalex.org/C60644358","wikidata":"https://www.wikidata.org/wiki/Q128570","display_name":"Bioinformatics","level":1,"score":0.3450591564178467},{"id":"https://openalex.org/C86803240","wikidata":"https://www.wikidata.org/wiki/Q420","display_name":"Biology","level":0,"score":0.3056125044822693},{"id":"https://openalex.org/C78458016","wikidata":"https://www.wikidata.org/wiki/Q840400","display_name":"Evolutionary biology","level":1,"score":0.18177127838134766},{"id":"https://openalex.org/C54355233","wikidata":"https://www.wikidata.org/wiki/Q7162","display_name":"Genetics","level":1,"score":0.13231778144836426},{"id":"https://openalex.org/C150194340","wikidata":"https://www.wikidata.org/wiki/Q26972","display_name":"Gene expression","level":3,"score":0.0},{"id":"https://openalex.org/C104317684","wikidata":"https://www.wikidata.org/wiki/Q7187","display_name":"Gene","level":2,"score":0.0}],"mesh":[{"descriptor_ui":"D015415","descriptor_name":"Biomarkers","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D015415","descriptor_name":"Biomarkers","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D015415","descriptor_name":"Biomarkers","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D019175","descriptor_name":"DNA Methylation","qualifier_ui":null,"qualifier_name":null,"is_major_topic":true},{"descriptor_ui":"D019175","descriptor_name":"DNA Methylation","qualifier_ui":null,"qualifier_name":null,"is_major_topic":true},{"descriptor_ui":"D019175","descriptor_name":"DNA Methylation","qualifier_ui":null,"qualifier_name":null,"is_major_topic":true},{"descriptor_ui":"D044127","descriptor_name":"Epigenesis, Genetic","qualifier_ui":null,"qualifier_name":null,"is_major_topic":true},{"descriptor_ui":"D044127","descriptor_name":"Epigenesis, Genetic","qualifier_ui":null,"qualifier_name":null,"is_major_topic":true},{"descriptor_ui":"D044127","descriptor_name":"Epigenesis, Genetic","qualifier_ui":null,"qualifier_name":null,"is_major_topic":true},{"descriptor_ui":"D057890","descriptor_name":"Epigenomics","qualifier_ui":"Q000379","qualifier_name":"methods","is_major_topic":false},{"descriptor_ui":"D057890","descriptor_name":"Epigenomics","qualifier_ui":"Q000379","qualifier_name":"methods","is_major_topic":false},{"descriptor_ui":"D057890","descriptor_name":"Epigenomics","qualifier_ui":"Q000379","qualifier_name":"methods","is_major_topic":false}],"locations_count":3,"locations":[{"id":"doi:10.1093/bib/bbac274","is_oa":false,"landing_page_url":"https://doi.org/10.1093/bib/bbac274","pdf_url":null,"source":{"id":"https://openalex.org/S91767247","display_name":"Briefings in Bioinformatics","issn_l":"1467-5463","issn":["1467-5463","1477-4054"],"is_oa":false,"is_in_doaj":true,"is_core":true,"host_organization":"https://openalex.org/P4310311648","host_organization_name":"Oxford University Press","host_organization_lineage":["https://openalex.org/P4310311648","https://openalex.org/P4310311647"],"host_organization_lineage_names":["Oxford University Press","University of Oxford"],"type":"journal"},"license":null,"license_id":null,"version":"publishedVersion","is_accepted":true,"is_published":true,"raw_source_name":"Briefings in Bioinformatics","raw_type":"journal-article"},{"id":"pmid:35794713","is_oa":false,"landing_page_url":"https://pubmed.ncbi.nlm.nih.gov/35794713","pdf_url":null,"source":{"id":"https://openalex.org/S4306525036","display_name":"PubMed","issn_l":null,"issn":null,"is_oa":false,"is_in_doaj":false,"is_core":false,"host_organization":"https://openalex.org/I1299303238","host_organization_name":"National Institutes of Health","host_organization_lineage":["https://openalex.org/I1299303238"],"host_organization_lineage_names":[],"type":"repository"},"license":null,"license_id":null,"version":"publishedVersion","is_accepted":true,"is_published":true,"raw_source_name":"Briefings in bioinformatics","raw_type":null},{"id":"pmh:oai:cris.unibo.it:11585/890186","is_oa":true,"landing_page_url":"https://academic.oup.com/bib/article/23/4/bbac274/6632619","pdf_url":null,"source":{"id":"https://openalex.org/S4306402579","display_name":"Archivio istituzionale della ricerca (Alma Mater Studiorum Universit\u00e0 di Bologna)","issn_l":null,"issn":null,"is_oa":false,"is_in_doaj":false,"is_core":false,"host_organization":"https://openalex.org/I4210117483","host_organization_name":"Istituto di Ematologia di Bologna","host_organization_lineage":["https://openalex.org/I4210117483"],"host_organization_lineage_names":[],"type":"repository"},"license":"other-oa","license_id":"https://openalex.org/licenses/other-oa","version":"submittedVersion","is_accepted":false,"is_published":false,"raw_source_name":null,"raw_type":"info:eu-repo/semantics/article"}],"best_oa_location":{"id":"pmh:oai:cris.unibo.it:11585/890186","is_oa":true,"landing_page_url":"https://academic.oup.com/bib/article/23/4/bbac274/6632619","pdf_url":null,"source":{"id":"https://openalex.org/S4306402579","display_name":"Archivio istituzionale della ricerca (Alma Mater Studiorum Universit\u00e0 di Bologna)","issn_l":null,"issn":null,"is_oa":false,"is_in_doaj":false,"is_core":false,"host_organization":"https://openalex.org/I4210117483","host_organization_name":"Istituto di Ematologia di Bologna","host_organization_lineage":["https://openalex.org/I4210117483"],"host_organization_lineage_names":[],"type":"repository"},"license":"other-oa","license_id":"https://openalex.org/licenses/other-oa","version":"submittedVersion","is_accepted":false,"is_published":false,"raw_source_name":null,"raw_type":"info:eu-repo/semantics/article"},"sustainable_development_goals":[],"awards":[],"funders":[],"has_content":{"pdf":false,"grobid_xml":false},"content_urls":null,"referenced_works_count":101,"referenced_works":["https://openalex.org/W1612719023","https://openalex.org/W1662394573","https://openalex.org/W1678356000","https://openalex.org/W1876466633","https://openalex.org/W1974047233","https://openalex.org/W1975528145","https://openalex.org/W1980326316","https://openalex.org/W2020541351","https://openalex.org/W2027272551","https://openalex.org/W2036284273","https://openalex.org/W2052629634","https://openalex.org/W2061076014","https://openalex.org/W2064013109","https://openalex.org/W2074572936","https://openalex.org/W2076750860","https://openalex.org/W2080644309","https://openalex.org/W2085245717","https://openalex.org/W2101870168","https://openalex.org/W2107665951","https://openalex.org/W2108947463","https://openalex.org/W2111041757","https://openalex.org/W2119883345","https://openalex.org/W2121091193","https://openalex.org/W2122825543","https://openalex.org/W2124317383","https://openalex.org/W2127431419","https://openalex.org/W2141105144","https://openalex.org/W2143426320","https://openalex.org/W2145975061","https://openalex.org/W2146794662","https://openalex.org/W2151520443","https://openalex.org/W2163887613","https://openalex.org/W2165700458","https://openalex.org/W2218040246","https://openalex.org/W2421283105","https://openalex.org/W2460742292","https://openalex.org/W2463513647","https://openalex.org/W2469748284","https://openalex.org/W2528967511","https://openalex.org/W2529024004","https://openalex.org/W2529664418","https://openalex.org/W2557295976","https://openalex.org/W2573412700","https://openalex.org/W2590469096","https://openalex.org/W2596440417","https://openalex.org/W2604242089","https://openalex.org/W2615329977","https://openalex.org/W2623637581","https://openalex.org/W2773327522","https://openalex.org/W2788036298","https://openalex.org/W2793232416","https://openalex.org/W2796559433","https://openalex.org/W2797317586","https://openalex.org/W2801044207","https://openalex.org/W2808480928","https://openalex.org/W2883262856","https://openalex.org/W2888088750","https://openalex.org/W2902176542","https://openalex.org/W2907769417","https://openalex.org/W2912654909","https://openalex.org/W2915194834","https://openalex.org/W2917830189","https://openalex.org/W2949100461","https://openalex.org/W2952093052","https://openalex.org/W2956136191","https://openalex.org/W2969410982","https://openalex.org/W2979806115","https://openalex.org/W2980520436","https://openalex.org/W2989886717","https://openalex.org/W2990385305","https://openalex.org/W2990428470","https://openalex.org/W2995813047","https://openalex.org/W3007728540","https://openalex.org/W3010808949","https://openalex.org/W3010930131","https://openalex.org/W3020254640","https://openalex.org/W3022131036","https://openalex.org/W3037029383","https://openalex.org/W3037895933","https://openalex.org/W3040912464","https://openalex.org/W3044392860","https://openalex.org/W3097290795","https://openalex.org/W3107708563","https://openalex.org/W3110667791","https://openalex.org/W3111314674","https://openalex.org/W3111348072","https://openalex.org/W3124758554","https://openalex.org/W3148476387","https://openalex.org/W3158806857","https://openalex.org/W3164893709","https://openalex.org/W3164927336","https://openalex.org/W3165451852","https://openalex.org/W3193754681","https://openalex.org/W3199647353","https://openalex.org/W4236388726","https://openalex.org/W4237142329","https://openalex.org/W4294541781","https://openalex.org/W6643904261","https://openalex.org/W6669703549","https://openalex.org/W6734632788","https://openalex.org/W6786888246"],"related_works":["https://openalex.org/W4310701073","https://openalex.org/W2803144677","https://openalex.org/W4283466013","https://openalex.org/W3159109601","https://openalex.org/W2146794662","https://openalex.org/W2892140761","https://openalex.org/W2986850781","https://openalex.org/W2990385305","https://openalex.org/W3045052814","https://openalex.org/W2952198659"],"abstract_inverted_index":{"In":[0],"recent":[1],"years":[2],"there":[3],"has":[4],"been":[5],"a":[6,35,76,85,103,113,124],"widespread":[7],"interest":[8],"in":[9,24,94,133],"researching":[10],"biomarkers":[11,57],"of":[12,28,38,43,55,68,79,96,105,116,127],"aging":[13],"that":[14],"could":[15,46],"predict":[16],"physiological":[17],"vulnerability":[18],"better":[19,48],"than":[20],"chronological":[21],"age.":[22,62],"Aging,":[23],"fact,":[25],"is":[26,58],"one":[27],"the":[29,52,64,117],"most":[30,53],"relevant":[31],"risk":[32],"factors":[33],"for":[34],"wide":[36],"range":[37],"maladies,":[39],"and":[40,66,92,100,123],"molecular":[41],"surrogates":[42],"this":[44],"phenotype":[45],"enable":[47],"patients":[49],"stratification.":[50],"Among":[51],"promising":[54],"such":[56,80],"DNA":[59],"methylation-based":[60],"biological":[61],"Given":[63],"potential":[65],"variety":[67],"computational":[69,118],"implementations":[70],"(epigenetic":[71],"clocks),":[72],"we":[73,83],"here":[74],"present":[75],"systematic":[77],"review":[78],"clocks.":[81],"Furthermore,":[82],"provide":[84],"large-scale":[86],"performance":[87],"comparison":[88],"across":[89],"different":[90],"tissues":[91],"diseases":[93],"terms":[95],"age":[97,101],"prediction":[98],"accuracy":[99],"acceleration,":[102],"measure":[104],"deviance":[106],"from":[107],"physiology.":[108],"Our":[109],"analysis":[110],"offers":[111],"both":[112],"state-of-the-art":[114],"overview":[115],"techniques":[119],"developed":[120],"so":[121],"far":[122],"heterogeneous":[125],"picture":[126],"performances,":[128],"which":[129],"can":[130],"be":[131],"helpful":[132],"orienting":[134],"future":[135],"research.":[136]},"counts_by_year":[{"year":2025,"cited_by_count":2},{"year":2024,"cited_by_count":3},{"year":2023,"cited_by_count":4}],"updated_date":"2025-11-06T03:46:38.306776","created_date":"2025-10-10T00:00:00"}
