{"id":"https://openalex.org/W4282945893","doi":"https://doi.org/10.1093/bib/bbac224","title":"idenMD-NRF: a ranking framework for miRNA-disease association identification","display_name":"idenMD-NRF: a ranking framework for miRNA-disease association identification","publication_year":2022,"publication_date":"2022-06-09","ids":{"openalex":"https://openalex.org/W4282945893","doi":"https://doi.org/10.1093/bib/bbac224"},"language":"en","primary_location":{"id":"doi:10.1093/bib/bbac224","is_oa":false,"landing_page_url":"https://doi.org/10.1093/bib/bbac224","pdf_url":null,"source":{"id":"https://openalex.org/S91767247","display_name":"Briefings in Bioinformatics","issn_l":"1467-5463","issn":["1467-5463","1477-4054"],"is_oa":false,"is_in_doaj":true,"is_core":true,"host_organization":"https://openalex.org/P4310311648","host_organization_name":"Oxford University Press","host_organization_lineage":["https://openalex.org/P4310311648","https://openalex.org/P4310311647"],"host_organization_lineage_names":["Oxford University Press","University of Oxford"],"type":"journal"},"license":null,"license_id":null,"version":"publishedVersion","is_accepted":true,"is_published":true,"raw_source_name":"Briefings in Bioinformatics","raw_type":"journal-article"},"type":"article","indexed_in":["crossref","doaj"],"open_access":{"is_oa":false,"oa_status":"closed","oa_url":null,"any_repository_has_fulltext":false},"authorships":[{"author_position":"first","author":{"id":"https://openalex.org/A5107678765","display_name":"Wenxiang Zhang","orcid":"https://orcid.org/0000-0002-8926-1615"},"institutions":[{"id":"https://openalex.org/I125839683","display_name":"Beijing Institute of Technology","ror":"https://ror.org/01skt4w74","country_code":"CN","type":"education","lineage":["https://openalex.org/I125839683","https://openalex.org/I890469752"]}],"countries":["CN"],"is_corresponding":false,"raw_author_name":"Wenxiang Zhang","raw_affiliation_strings":["School of Computer Science and Technology, Beijing Institute of Technology , Beijing, 100081, China"],"affiliations":[{"raw_affiliation_string":"School of Computer Science and Technology, Beijing Institute of Technology , Beijing, 100081, China","institution_ids":["https://openalex.org/I125839683"]}]},{"author_position":"middle","author":{"id":"https://openalex.org/A5081941068","display_name":"Hang Wei","orcid":"https://orcid.org/0000-0002-0579-1716"},"institutions":[{"id":"https://openalex.org/I149594827","display_name":"Xidian University","ror":"https://ror.org/05s92vm98","country_code":"CN","type":"education","lineage":["https://openalex.org/I149594827"]}],"countries":["CN"],"is_corresponding":false,"raw_author_name":"Hang Wei","raw_affiliation_strings":["School of Computer Science and Technology, Xidian University , Xi\u2019an, Shaanxi 710071, China"],"affiliations":[{"raw_affiliation_string":"School of Computer Science and Technology, Xidian University , Xi\u2019an, Shaanxi 710071, China","institution_ids":["https://openalex.org/I149594827"]}]},{"author_position":"last","author":{"id":"https://openalex.org/A5040486509","display_name":"Bin Liu","orcid":null},"institutions":[{"id":"https://openalex.org/I125839683","display_name":"Beijing Institute of Technology","ror":"https://ror.org/01skt4w74","country_code":"CN","type":"education","lineage":["https://openalex.org/I125839683","https://openalex.org/I890469752"]}],"countries":["CN"],"is_corresponding":true,"raw_author_name":"Bin Liu","raw_affiliation_strings":["Advanced Research Institute of Multidisciplinary Science, Beijing Institute of Technology , Beijing, 100081, China","School of Computer Science and Technology, Beijing Institute of Technology , Beijing, 100081, China"],"affiliations":[{"raw_affiliation_string":"Advanced Research Institute of Multidisciplinary Science, Beijing Institute of Technology , Beijing, 100081, China","institution_ids":["https://openalex.org/I125839683"]},{"raw_affiliation_string":"School of Computer Science and Technology, Beijing Institute of Technology , Beijing, 100081, China","institution_ids":["https://openalex.org/I125839683"]}]}],"institutions":[],"countries_distinct_count":1,"institutions_distinct_count":3,"corresponding_author_ids":["https://openalex.org/A5040486509"],"corresponding_institution_ids":["https://openalex.org/I125839683"],"apc_list":{"value":4011,"currency":"USD","value_usd":4011},"apc_paid":null,"fwci":1.1262,"has_fulltext":false,"cited_by_count":10,"citation_normalized_percentile":{"value":0.76445568,"is_in_top_1_percent":false,"is_in_top_10_percent":false},"cited_by_percentile_year":{"min":94,"max":98},"biblio":{"volume":"23","issue":"4","first_page":null,"last_page":null},"is_retracted":false,"is_paratext":false,"is_xpac":false,"primary_topic":{"id":"https://openalex.org/T10062","display_name":"MicroRNA in disease regulation","score":0.9997000098228455,"subfield":{"id":"https://openalex.org/subfields/1306","display_name":"Cancer Research"},"field":{"id":"https://openalex.org/fields/13","display_name":"Biochemistry, Genetics and Molecular Biology"},"domain":{"id":"https://openalex.org/domains/1","display_name":"Life Sciences"}},"topics":[{"id":"https://openalex.org/T10062","display_name":"MicroRNA in disease regulation","score":0.9997000098228455,"subfield":{"id":"https://openalex.org/subfields/1306","display_name":"Cancer Research"},"field":{"id":"https://openalex.org/fields/13","display_name":"Biochemistry, Genetics and Molecular Biology"},"domain":{"id":"https://openalex.org/domains/1","display_name":"Life Sciences"}},{"id":"https://openalex.org/T10515","display_name":"Cancer-related molecular mechanisms research","score":0.9993000030517578,"subfield":{"id":"https://openalex.org/subfields/1306","display_name":"Cancer Research"},"field":{"id":"https://openalex.org/fields/13","display_name":"Biochemistry, Genetics and Molecular Biology"},"domain":{"id":"https://openalex.org/domains/1","display_name":"Life Sciences"}},{"id":"https://openalex.org/T11482","display_name":"RNA modifications and cancer","score":0.9972000122070312,"subfield":{"id":"https://openalex.org/subfields/1312","display_name":"Molecular Biology"},"field":{"id":"https://openalex.org/fields/13","display_name":"Biochemistry, Genetics and Molecular Biology"},"domain":{"id":"https://openalex.org/domains/1","display_name":"Life Sciences"}}],"keywords":[{"id":"https://openalex.org/keywords/ranking","display_name":"Ranking (information retrieval)","score":0.7303910851478577},{"id":"https://openalex.org/keywords/identification","display_name":"Identification (biology)","score":0.7159506678581238},{"id":"https://openalex.org/keywords/computer-science","display_name":"Computer science","score":0.577571451663971},{"id":"https://openalex.org/keywords/computational-biology","display_name":"Computational biology","score":0.5104090571403503},{"id":"https://openalex.org/keywords/task","display_name":"Task (project management)","score":0.5099314451217651},{"id":"https://openalex.org/keywords/microrna","display_name":"microRNA","score":0.4973657429218292},{"id":"https://openalex.org/keywords/disease","display_name":"Disease","score":0.4765534996986389},{"id":"https://openalex.org/keywords/association","display_name":"Association (psychology)","score":0.45637214183807373},{"id":"https://openalex.org/keywords/rank","display_name":"Rank (graph theory)","score":0.4442763328552246},{"id":"https://openalex.org/keywords/data-mining","display_name":"Data mining","score":0.37707799673080444},{"id":"https://openalex.org/keywords/machine-learning","display_name":"Machine learning","score":0.2986114025115967},{"id":"https://openalex.org/keywords/biology","display_name":"Biology","score":0.20923131704330444},{"id":"https://openalex.org/keywords/medicine","display_name":"Medicine","score":0.19534450769424438},{"id":"https://openalex.org/keywords/gene","display_name":"Gene","score":0.13769781589508057},{"id":"https://openalex.org/keywords/mathematics","display_name":"Mathematics","score":0.09719923138618469},{"id":"https://openalex.org/keywords/genetics","display_name":"Genetics","score":0.09686055779457092}],"concepts":[{"id":"https://openalex.org/C189430467","wikidata":"https://www.wikidata.org/wiki/Q7293293","display_name":"Ranking (information retrieval)","level":2,"score":0.7303910851478577},{"id":"https://openalex.org/C116834253","wikidata":"https://www.wikidata.org/wiki/Q2039217","display_name":"Identification (biology)","level":2,"score":0.7159506678581238},{"id":"https://openalex.org/C41008148","wikidata":"https://www.wikidata.org/wiki/Q21198","display_name":"Computer science","level":0,"score":0.577571451663971},{"id":"https://openalex.org/C70721500","wikidata":"https://www.wikidata.org/wiki/Q177005","display_name":"Computational biology","level":1,"score":0.5104090571403503},{"id":"https://openalex.org/C2780451532","wikidata":"https://www.wikidata.org/wiki/Q759676","display_name":"Task (project management)","level":2,"score":0.5099314451217651},{"id":"https://openalex.org/C145059251","wikidata":"https://www.wikidata.org/wiki/Q310899","display_name":"microRNA","level":3,"score":0.4973657429218292},{"id":"https://openalex.org/C2779134260","wikidata":"https://www.wikidata.org/wiki/Q12136","display_name":"Disease","level":2,"score":0.4765534996986389},{"id":"https://openalex.org/C142853389","wikidata":"https://www.wikidata.org/wiki/Q744778","display_name":"Association (psychology)","level":2,"score":0.45637214183807373},{"id":"https://openalex.org/C164226766","wikidata":"https://www.wikidata.org/wiki/Q7293202","display_name":"Rank (graph theory)","level":2,"score":0.4442763328552246},{"id":"https://openalex.org/C124101348","wikidata":"https://www.wikidata.org/wiki/Q172491","display_name":"Data mining","level":1,"score":0.37707799673080444},{"id":"https://openalex.org/C119857082","wikidata":"https://www.wikidata.org/wiki/Q2539","display_name":"Machine learning","level":1,"score":0.2986114025115967},{"id":"https://openalex.org/C86803240","wikidata":"https://www.wikidata.org/wiki/Q420","display_name":"Biology","level":0,"score":0.20923131704330444},{"id":"https://openalex.org/C71924100","wikidata":"https://www.wikidata.org/wiki/Q11190","display_name":"Medicine","level":0,"score":0.19534450769424438},{"id":"https://openalex.org/C104317684","wikidata":"https://www.wikidata.org/wiki/Q7187","display_name":"Gene","level":2,"score":0.13769781589508057},{"id":"https://openalex.org/C33923547","wikidata":"https://www.wikidata.org/wiki/Q395","display_name":"Mathematics","level":0,"score":0.09719923138618469},{"id":"https://openalex.org/C54355233","wikidata":"https://www.wikidata.org/wiki/Q7162","display_name":"Genetics","level":1,"score":0.09686055779457092},{"id":"https://openalex.org/C187736073","wikidata":"https://www.wikidata.org/wiki/Q2920921","display_name":"Management","level":1,"score":0.0},{"id":"https://openalex.org/C114614502","wikidata":"https://www.wikidata.org/wiki/Q76592","display_name":"Combinatorics","level":1,"score":0.0},{"id":"https://openalex.org/C59822182","wikidata":"https://www.wikidata.org/wiki/Q441","display_name":"Botany","level":1,"score":0.0},{"id":"https://openalex.org/C111472728","wikidata":"https://www.wikidata.org/wiki/Q9471","display_name":"Epistemology","level":1,"score":0.0},{"id":"https://openalex.org/C162324750","wikidata":"https://www.wikidata.org/wiki/Q8134","display_name":"Economics","level":0,"score":0.0},{"id":"https://openalex.org/C142724271","wikidata":"https://www.wikidata.org/wiki/Q7208","display_name":"Pathology","level":1,"score":0.0},{"id":"https://openalex.org/C138885662","wikidata":"https://www.wikidata.org/wiki/Q5891","display_name":"Philosophy","level":0,"score":0.0}],"mesh":[],"locations_count":1,"locations":[{"id":"doi:10.1093/bib/bbac224","is_oa":false,"landing_page_url":"https://doi.org/10.1093/bib/bbac224","pdf_url":null,"source":{"id":"https://openalex.org/S91767247","display_name":"Briefings in Bioinformatics","issn_l":"1467-5463","issn":["1467-5463","1477-4054"],"is_oa":false,"is_in_doaj":true,"is_core":true,"host_organization":"https://openalex.org/P4310311648","host_organization_name":"Oxford University Press","host_organization_lineage":["https://openalex.org/P4310311648","https://openalex.org/P4310311647"],"host_organization_lineage_names":["Oxford University Press","University of Oxford"],"type":"journal"},"license":null,"license_id":null,"version":"publishedVersion","is_accepted":true,"is_published":true,"raw_source_name":"Briefings in Bioinformatics","raw_type":"journal-article"}],"best_oa_location":null,"sustainable_development_goals":[],"awards":[{"id":"https://openalex.org/G3425444037","display_name":null,"funder_award_id":"2018AAA0100100","funder_id":"https://openalex.org/F4320335777","funder_display_name":"National Key Research and Development Program of China"},{"id":"https://openalex.org/G6876496325","display_name":null,"funder_award_id":"JQ19019","funder_id":"https://openalex.org/F4320322919","funder_display_name":"Natural Science Foundation of Beijing Municipality"}],"funders":[{"id":"https://openalex.org/F4320322919","display_name":"Natural Science Foundation of Beijing Municipality","ror":null},{"id":"https://openalex.org/F4320335777","display_name":"National Key Research and Development Program of China","ror":null}],"has_content":{"grobid_xml":false,"pdf":false},"content_urls":null,"referenced_works_count":59,"referenced_works":["https://openalex.org/W2022732522","https://openalex.org/W2062533676","https://openalex.org/W2084787613","https://openalex.org/W2087064593","https://openalex.org/W2101626488","https://openalex.org/W2103151642","https://openalex.org/W2106029302","https://openalex.org/W2115584760","https://openalex.org/W2124045889","https://openalex.org/W2128049108","https://openalex.org/W2131835644","https://openalex.org/W2138664009","https://openalex.org/W2140099276","https://openalex.org/W2146292498","https://openalex.org/W2155653793","https://openalex.org/W2158135353","https://openalex.org/W2419892062","https://openalex.org/W2537429907","https://openalex.org/W2574217686","https://openalex.org/W2765950793","https://openalex.org/W2771019114","https://openalex.org/W2809363952","https://openalex.org/W2894848101","https://openalex.org/W2898440040","https://openalex.org/W2903672323","https://openalex.org/W2911964244","https://openalex.org/W2912022990","https://openalex.org/W2930902918","https://openalex.org/W2942820662","https://openalex.org/W2944230847","https://openalex.org/W2947192438","https://openalex.org/W2962756421","https://openalex.org/W2971621191","https://openalex.org/W2981242070","https://openalex.org/W2981316968","https://openalex.org/W2983688743","https://openalex.org/W2986956954","https://openalex.org/W2991321419","https://openalex.org/W3001440478","https://openalex.org/W3008212528","https://openalex.org/W3014506286","https://openalex.org/W3015492777","https://openalex.org/W3022179362","https://openalex.org/W3025373576","https://openalex.org/W3027920886","https://openalex.org/W3037907537","https://openalex.org/W3048139880","https://openalex.org/W3084310327","https://openalex.org/W3093863546","https://openalex.org/W3146565636","https://openalex.org/W3159197832","https://openalex.org/W3170286690","https://openalex.org/W4205736070","https://openalex.org/W4210607727","https://openalex.org/W4220859562","https://openalex.org/W4246271082","https://openalex.org/W4255156463","https://openalex.org/W6677385034","https://openalex.org/W6836575638"],"related_works":["https://openalex.org/W3160516639","https://openalex.org/W2081647779","https://openalex.org/W3149451069","https://openalex.org/W4307465619","https://openalex.org/W3120117209","https://openalex.org/W4376166834","https://openalex.org/W2753828065","https://openalex.org/W2034972911","https://openalex.org/W4289488615","https://openalex.org/W2886748451"],"abstract_inverted_index":{"Abstract":[0],"Identifying":[1],"miRNA-disease":[2,61,67],"associations":[3,30],"is":[4,45,58,109,122],"an":[5,71],"important":[6],"task":[7],"for":[8,27,42,60],"revealing":[9],"pathogenic":[10],"mechanism":[11],"of":[12,119],"complicated":[13],"diseases.":[14],"Different":[15],"computational":[16],"methods":[17,23],"have":[18],"been":[19],"proposed.":[20],"Although":[21],"these":[22],"obtained":[24],"encouraging":[25],"performance":[26],"detecting":[28],"missing":[29],"between":[31],"known":[32],"miRNAs":[33,44],"and":[34,95],"diseases,":[35],"how":[36],"to":[37,83,86,111],"accurately":[38],"predict":[39],"associated":[40,88],"diseases":[41,89],"new":[43],"still":[46],"a":[47,53,76],"difficult":[48],"task.":[49,74],"In":[50],"this":[51],"regard,":[52],"ranking":[54],"framework":[55],"named":[56],"idenMD-NRF":[57,64,80,108,120],"proposed":[59],"association":[62,68,93],"identification.":[63],"treats":[65],"the":[66],"identification":[69],"as":[70],"information":[72],"retrieval":[73],"Given":[75],"novel":[77],"query":[78],"miRNA,":[79],"employs":[81],"Learning":[82],"Rank":[84],"algorithm":[85],"rank":[87],"based":[90],"on":[91,101],"high-level":[92],"features":[94],"various":[96],"predictors.":[97,114],"The":[98],"experimental":[99],"results":[100],"two":[102],"independent":[103],"test":[104],"datasets":[105],"indicate":[106],"that":[107],"superior":[110],"other":[112],"compared":[113],"A":[115],"user-friendly":[116],"web":[117],"server":[118],"predictor":[121],"freely":[123],"available":[124],"at":[125],"http://bliulab.net/idenMD-NRF/.":[126]},"counts_by_year":[{"year":2024,"cited_by_count":5},{"year":2023,"cited_by_count":3},{"year":2022,"cited_by_count":2}],"updated_date":"2025-11-06T03:46:38.306776","created_date":"2022-06-16T00:00:00"}
