{"id":"https://openalex.org/W4282913188","doi":"https://doi.org/10.1093/bib/bbac207","title":"Heterogeneous data integration methods for patient similarity networks","display_name":"Heterogeneous data integration methods for patient similarity networks","publication_year":2022,"publication_date":"2022-05-10","ids":{"openalex":"https://openalex.org/W4282913188","doi":"https://doi.org/10.1093/bib/bbac207","pmid":"https://pubmed.ncbi.nlm.nih.gov/35679533"},"language":"en","primary_location":{"id":"doi:10.1093/bib/bbac207","is_oa":true,"landing_page_url":"https://doi.org/10.1093/bib/bbac207","pdf_url":"https://academic.oup.com/bib/article-pdf/23/4/bbac207/45016588/bbac207.pdf","source":{"id":"https://openalex.org/S91767247","display_name":"Briefings in Bioinformatics","issn_l":"1467-5463","issn":["1467-5463","1477-4054"],"is_oa":false,"is_in_doaj":true,"is_core":true,"host_organization":"https://openalex.org/P4310311648","host_organization_name":"Oxford University Press","host_organization_lineage":["https://openalex.org/P4310311648","https://openalex.org/P4310311647"],"host_organization_lineage_names":["Oxford University Press","University of Oxford"],"type":"journal"},"license":"cc-by","license_id":"https://openalex.org/licenses/cc-by","version":"publishedVersion","is_accepted":true,"is_published":true,"raw_source_name":"Briefings in Bioinformatics","raw_type":"journal-article"},"type":"review","indexed_in":["crossref","doaj","pubmed"],"open_access":{"is_oa":true,"oa_status":"hybrid","oa_url":"https://academic.oup.com/bib/article-pdf/23/4/bbac207/45016588/bbac207.pdf","any_repository_has_fulltext":true},"authorships":[{"author_position":"first","author":{"id":"https://openalex.org/A5056406146","display_name":"Jessica Gliozzo","orcid":"https://orcid.org/0000-0001-7629-8112"},"institutions":[{"id":"https://openalex.org/I4210118689","display_name":"Joint Research Centre","ror":"https://ror.org/02qezmz13","country_code":"IT","type":"government","lineage":["https://openalex.org/I1320481043","https://openalex.org/I2800387288","https://openalex.org/I4210118689","https://openalex.org/I4210161702"]},{"id":"https://openalex.org/I4210152452","display_name":"Consorzio Interuniversitario Nazionale per l'Informatica","ror":"https://ror.org/03v8v5y65","country_code":"IT","type":"facility","lineage":["https://openalex.org/I4210152452"]},{"id":"https://openalex.org/I189158943","display_name":"University of Milan","ror":"https://ror.org/00wjc7c48","country_code":"IT","type":"education","lineage":["https://openalex.org/I189158943"]}],"countries":["IT"],"is_corresponding":false,"raw_author_name":"Jessica Gliozzo","raw_affiliation_strings":["AnacletoLab - Computer Science Department, Universit\u00e1 degli Studi di Milano , Via Celoria 18, 20135, Milan , Italy","CINI, Infolife National Laboratory , Roma , Italy","European Commission, Joint Research Centre (JRC) , Ispra (VA) , Italy"],"affiliations":[{"raw_affiliation_string":"AnacletoLab - Computer Science Department, Universit\u00e1 degli Studi di Milano , Via Celoria 18, 20135, Milan , Italy","institution_ids":["https://openalex.org/I189158943"]},{"raw_affiliation_string":"CINI, Infolife National Laboratory , Roma , Italy","institution_ids":["https://openalex.org/I4210152452"]},{"raw_affiliation_string":"European Commission, Joint Research Centre (JRC) , Ispra (VA) , Italy","institution_ids":["https://openalex.org/I4210118689"]}]},{"author_position":"middle","author":{"id":"https://openalex.org/A5089929382","display_name":"Marco Mesiti","orcid":"https://orcid.org/0000-0001-5701-0080"},"institutions":[{"id":"https://openalex.org/I189158943","display_name":"University of Milan","ror":"https://ror.org/00wjc7c48","country_code":"IT","type":"education","lineage":["https://openalex.org/I189158943"]},{"id":"https://openalex.org/I4210152452","display_name":"Consorzio Interuniversitario Nazionale per l'Informatica","ror":"https://ror.org/03v8v5y65","country_code":"IT","type":"facility","lineage":["https://openalex.org/I4210152452"]}],"countries":["IT"],"is_corresponding":false,"raw_author_name":"Marco Mesiti","raw_affiliation_strings":["AnacletoLab - Computer Science Department, Universit\u00e1 degli Studi di Milano , Via Celoria 18, 20135, Milan , Italy","CINI, Infolife National Laboratory , Roma , Italy"],"affiliations":[{"raw_affiliation_string":"AnacletoLab - Computer Science Department, Universit\u00e1 degli Studi di Milano , Via Celoria 18, 20135, Milan , Italy","institution_ids":["https://openalex.org/I189158943"]},{"raw_affiliation_string":"CINI, Infolife National Laboratory , Roma , Italy","institution_ids":["https://openalex.org/I4210152452"]}]},{"author_position":"middle","author":{"id":"https://openalex.org/A5075065915","display_name":"Marco Notaro","orcid":"https://orcid.org/0000-0003-4309-2200"},"institutions":[{"id":"https://openalex.org/I189158943","display_name":"University of Milan","ror":"https://ror.org/00wjc7c48","country_code":"IT","type":"education","lineage":["https://openalex.org/I189158943"]},{"id":"https://openalex.org/I4210152452","display_name":"Consorzio Interuniversitario Nazionale per l'Informatica","ror":"https://ror.org/03v8v5y65","country_code":"IT","type":"facility","lineage":["https://openalex.org/I4210152452"]}],"countries":["IT"],"is_corresponding":false,"raw_author_name":"Marco Notaro","raw_affiliation_strings":["AnacletoLab - Computer Science Department, Universit\u00e1 degli Studi di Milano , Via Celoria 18, 20135, Milan , Italy","CINI, Infolife National Laboratory , Roma , Italy"],"affiliations":[{"raw_affiliation_string":"AnacletoLab - Computer Science Department, Universit\u00e1 degli Studi di Milano , Via Celoria 18, 20135, Milan , Italy","institution_ids":["https://openalex.org/I189158943"]},{"raw_affiliation_string":"CINI, Infolife National Laboratory , Roma , Italy","institution_ids":["https://openalex.org/I4210152452"]}]},{"author_position":"middle","author":{"id":"https://openalex.org/A5042201502","display_name":"Alessandro Petrini","orcid":"https://orcid.org/0000-0002-0587-1484"},"institutions":[{"id":"https://openalex.org/I4210152452","display_name":"Consorzio Interuniversitario Nazionale per l'Informatica","ror":"https://ror.org/03v8v5y65","country_code":"IT","type":"facility","lineage":["https://openalex.org/I4210152452"]},{"id":"https://openalex.org/I189158943","display_name":"University of Milan","ror":"https://ror.org/00wjc7c48","country_code":"IT","type":"education","lineage":["https://openalex.org/I189158943"]}],"countries":["IT"],"is_corresponding":false,"raw_author_name":"Alessandro Petrini","raw_affiliation_strings":["AnacletoLab - Computer Science Department, Universit\u00e1 degli Studi di Milano , Via Celoria 18, 20135, Milan , Italy","CINI, Infolife National Laboratory , Roma , Italy"],"affiliations":[{"raw_affiliation_string":"AnacletoLab - Computer Science Department, Universit\u00e1 degli Studi di Milano , Via Celoria 18, 20135, Milan , Italy","institution_ids":["https://openalex.org/I189158943"]},{"raw_affiliation_string":"CINI, Infolife National Laboratory , Roma , Italy","institution_ids":["https://openalex.org/I4210152452"]}]},{"author_position":"middle","author":{"id":"https://openalex.org/A5077231880","display_name":"Alex Patak","orcid":"https://orcid.org/0000-0002-9282-188X"},"institutions":[{"id":"https://openalex.org/I4210118689","display_name":"Joint Research Centre","ror":"https://ror.org/02qezmz13","country_code":"IT","type":"government","lineage":["https://openalex.org/I1320481043","https://openalex.org/I2800387288","https://openalex.org/I4210118689","https://openalex.org/I4210161702"]}],"countries":["IT"],"is_corresponding":false,"raw_author_name":"Alex Patak","raw_affiliation_strings":["European Commission, Joint Research Centre (JRC) , Ispra (VA) , Italy"],"affiliations":[{"raw_affiliation_string":"European Commission, Joint Research Centre (JRC) , Ispra (VA) , Italy","institution_ids":["https://openalex.org/I4210118689"]}]},{"author_position":"middle","author":{"id":"https://openalex.org/A5039386154","display_name":"Antonio Puertas Gallardo","orcid":"https://orcid.org/0000-0003-3457-4777"},"institutions":[{"id":"https://openalex.org/I4210118689","display_name":"Joint Research Centre","ror":"https://ror.org/02qezmz13","country_code":"IT","type":"government","lineage":["https://openalex.org/I1320481043","https://openalex.org/I2800387288","https://openalex.org/I4210118689","https://openalex.org/I4210161702"]}],"countries":["IT"],"is_corresponding":false,"raw_author_name":"Antonio Puertas-Gallardo","raw_affiliation_strings":["European Commission, Joint Research Centre (JRC) , Ispra (VA) , Italy"],"affiliations":[{"raw_affiliation_string":"European Commission, Joint Research Centre (JRC) , Ispra (VA) , Italy","institution_ids":["https://openalex.org/I4210118689"]}]},{"author_position":"middle","author":{"id":"https://openalex.org/A5030607460","display_name":"Alberto Paccanaro","orcid":"https://orcid.org/0000-0001-8059-1346"},"institutions":[{"id":"https://openalex.org/I44202434","display_name":"Funda\u00e7\u00e3o Getulio Vargas","ror":"https://ror.org/01evzkn27","country_code":"BR","type":"education","lineage":["https://openalex.org/I44202434"]},{"id":"https://openalex.org/I184558857","display_name":"Royal Holloway University of London","ror":"https://ror.org/04g2vpn86","country_code":"GB","type":"education","lineage":["https://openalex.org/I124357947","https://openalex.org/I184558857"]}],"countries":["BR","GB"],"is_corresponding":false,"raw_author_name":"Alberto Paccanaro","raw_affiliation_strings":["Department of Computer Science, Royal Holloway, University of London , Egham, TW20 0EX UK","School of Applied Mathematics (EMAp), Funda\u00e7\u00e3o Get\u00falio Vargas , Rio de Janeiro Brazil"],"affiliations":[{"raw_affiliation_string":"Department of Computer Science, Royal Holloway, University of London , Egham, TW20 0EX UK","institution_ids":["https://openalex.org/I184558857"]},{"raw_affiliation_string":"School of Applied Mathematics (EMAp), Funda\u00e7\u00e3o Get\u00falio Vargas , Rio de Janeiro Brazil","institution_ids":["https://openalex.org/I44202434"]}]},{"author_position":"middle","author":{"id":"https://openalex.org/A5071444502","display_name":"Giorgio Valentini","orcid":"https://orcid.org/0000-0002-5694-3919"},"institutions":[{"id":"https://openalex.org/I189158943","display_name":"University of Milan","ror":"https://ror.org/00wjc7c48","country_code":"IT","type":"education","lineage":["https://openalex.org/I189158943"]},{"id":"https://openalex.org/I4210152452","display_name":"Consorzio Interuniversitario Nazionale per l'Informatica","ror":"https://ror.org/03v8v5y65","country_code":"IT","type":"facility","lineage":["https://openalex.org/I4210152452"]}],"countries":["IT"],"is_corresponding":false,"raw_author_name":"Giorgio Valentini","raw_affiliation_strings":["AnacletoLab - Computer Science Department, Universit\u00e1 degli Studi di Milano , Via Celoria 18, 20135, Milan , Italy","CINI, Infolife National Laboratory , Roma , Italy","DSRC UNIMI, Data Science Research Center , Milano, 20135 , Italy","ELLIS, European Laboratory for Learning and Intelligent Systems , Berlin , Germany"],"affiliations":[{"raw_affiliation_string":"AnacletoLab - Computer Science Department, Universit\u00e1 degli Studi di Milano , Via Celoria 18, 20135, Milan , Italy","institution_ids":["https://openalex.org/I189158943"]},{"raw_affiliation_string":"CINI, Infolife National Laboratory , Roma , Italy","institution_ids":["https://openalex.org/I4210152452"]},{"raw_affiliation_string":"DSRC UNIMI, Data Science Research Center , Milano, 20135 , Italy","institution_ids":["https://openalex.org/I189158943"]},{"raw_affiliation_string":"ELLIS, European Laboratory for Learning and Intelligent Systems , Berlin , Germany","institution_ids":[]}]},{"author_position":"last","author":{"id":"https://openalex.org/A5079939753","display_name":"Elena Casiraghi","orcid":"https://orcid.org/0000-0003-2024-7572"},"institutions":[{"id":"https://openalex.org/I4210152452","display_name":"Consorzio Interuniversitario Nazionale per l'Informatica","ror":"https://ror.org/03v8v5y65","country_code":"IT","type":"facility","lineage":["https://openalex.org/I4210152452"]},{"id":"https://openalex.org/I189158943","display_name":"University of Milan","ror":"https://ror.org/00wjc7c48","country_code":"IT","type":"education","lineage":["https://openalex.org/I189158943"]}],"countries":["IT"],"is_corresponding":true,"raw_author_name":"Elena Casiraghi","raw_affiliation_strings":["AnacletoLab - Computer Science Department, Universit\u00e1 degli Studi di Milano , Via Celoria 18, 20135, Milan , Italy","CINI, Infolife National Laboratory , Roma , Italy"],"affiliations":[{"raw_affiliation_string":"AnacletoLab - Computer Science Department, Universit\u00e1 degli Studi di Milano , Via Celoria 18, 20135, Milan , Italy","institution_ids":["https://openalex.org/I189158943"]},{"raw_affiliation_string":"CINI, Infolife National Laboratory , Roma , Italy","institution_ids":["https://openalex.org/I4210152452"]}]}],"institutions":[],"countries_distinct_count":3,"institutions_distinct_count":9,"corresponding_author_ids":["https://openalex.org/A5079939753"],"corresponding_institution_ids":["https://openalex.org/I189158943","https://openalex.org/I4210152452"],"apc_list":{"value":4011,"currency":"USD","value_usd":4011},"apc_paid":{"value":4011,"currency":"USD","value_usd":4011},"fwci":2.9512,"has_fulltext":true,"cited_by_count":34,"citation_normalized_percentile":{"value":0.92268018,"is_in_top_1_percent":false,"is_in_top_10_percent":true},"cited_by_percentile_year":{"min":94,"max":99},"biblio":{"volume":"23","issue":"4","first_page":null,"last_page":null},"is_retracted":false,"is_paratext":false,"is_xpac":false,"primary_topic":{"id":"https://openalex.org/T10887","display_name":"Bioinformatics and Genomic Networks","score":0.9994999766349792,"subfield":{"id":"https://openalex.org/subfields/1312","display_name":"Molecular Biology"},"field":{"id":"https://openalex.org/fields/13","display_name":"Biochemistry, Genetics and Molecular Biology"},"domain":{"id":"https://openalex.org/domains/1","display_name":"Life Sciences"}},"topics":[{"id":"https://openalex.org/T10887","display_name":"Bioinformatics and Genomic Networks","score":0.9994999766349792,"subfield":{"id":"https://openalex.org/subfields/1312","display_name":"Molecular Biology"},"field":{"id":"https://openalex.org/fields/13","display_name":"Biochemistry, Genetics and Molecular Biology"},"domain":{"id":"https://openalex.org/domains/1","display_name":"Life Sciences"}},{"id":"https://openalex.org/T13702","display_name":"Machine Learning in Healthcare","score":0.9980999827384949,"subfield":{"id":"https://openalex.org/subfields/1702","display_name":"Artificial Intelligence"},"field":{"id":"https://openalex.org/fields/17","display_name":"Computer Science"},"domain":{"id":"https://openalex.org/domains/3","display_name":"Physical Sciences"}},{"id":"https://openalex.org/T10885","display_name":"Gene expression and cancer classification","score":0.9972000122070312,"subfield":{"id":"https://openalex.org/subfields/1312","display_name":"Molecular Biology"},"field":{"id":"https://openalex.org/fields/13","display_name":"Biochemistry, Genetics and Molecular Biology"},"domain":{"id":"https://openalex.org/domains/1","display_name":"Life Sciences"}}],"keywords":[{"id":"https://openalex.org/keywords/computer-science","display_name":"Computer science","score":0.7643131613731384},{"id":"https://openalex.org/keywords/leverage","display_name":"Leverage (statistics)","score":0.6908530592918396},{"id":"https://openalex.org/keywords/machine-learning","display_name":"Machine learning","score":0.5937495827674866},{"id":"https://openalex.org/keywords/artificial-intelligence","display_name":"Artificial intelligence","score":0.5527523756027222},{"id":"https://openalex.org/keywords/data-integration","display_name":"Data integration","score":0.5495957732200623},{"id":"https://openalex.org/keywords/construct","display_name":"Construct (python library)","score":0.44961801171302795},{"id":"https://openalex.org/keywords/data-type","display_name":"Data type","score":0.44569799304008484},{"id":"https://openalex.org/keywords/similarity","display_name":"Similarity (geometry)","score":0.4361182153224945},{"id":"https://openalex.org/keywords/precision-medicine","display_name":"Precision medicine","score":0.41522809863090515},{"id":"https://openalex.org/keywords/data-science","display_name":"Data science","score":0.3273954689502716},{"id":"https://openalex.org/keywords/data-mining","display_name":"Data mining","score":0.32185453176498413},{"id":"https://openalex.org/keywords/medicine","display_name":"Medicine","score":0.14569216966629028},{"id":"https://openalex.org/keywords/image","display_name":"Image (mathematics)","score":0.10184097290039062}],"concepts":[{"id":"https://openalex.org/C41008148","wikidata":"https://www.wikidata.org/wiki/Q21198","display_name":"Computer science","level":0,"score":0.7643131613731384},{"id":"https://openalex.org/C153083717","wikidata":"https://www.wikidata.org/wiki/Q6535263","display_name":"Leverage (statistics)","level":2,"score":0.6908530592918396},{"id":"https://openalex.org/C119857082","wikidata":"https://www.wikidata.org/wiki/Q2539","display_name":"Machine learning","level":1,"score":0.5937495827674866},{"id":"https://openalex.org/C154945302","wikidata":"https://www.wikidata.org/wiki/Q11660","display_name":"Artificial intelligence","level":1,"score":0.5527523756027222},{"id":"https://openalex.org/C72634772","wikidata":"https://www.wikidata.org/wiki/Q386824","display_name":"Data integration","level":2,"score":0.5495957732200623},{"id":"https://openalex.org/C2780801425","wikidata":"https://www.wikidata.org/wiki/Q5164392","display_name":"Construct (python library)","level":2,"score":0.44961801171302795},{"id":"https://openalex.org/C138958017","wikidata":"https://www.wikidata.org/wiki/Q190087","display_name":"Data type","level":2,"score":0.44569799304008484},{"id":"https://openalex.org/C103278499","wikidata":"https://www.wikidata.org/wiki/Q254465","display_name":"Similarity (geometry)","level":3,"score":0.4361182153224945},{"id":"https://openalex.org/C163763905","wikidata":"https://www.wikidata.org/wiki/Q17075943","display_name":"Precision medicine","level":2,"score":0.41522809863090515},{"id":"https://openalex.org/C2522767166","wikidata":"https://www.wikidata.org/wiki/Q2374463","display_name":"Data science","level":1,"score":0.3273954689502716},{"id":"https://openalex.org/C124101348","wikidata":"https://www.wikidata.org/wiki/Q172491","display_name":"Data mining","level":1,"score":0.32185453176498413},{"id":"https://openalex.org/C71924100","wikidata":"https://www.wikidata.org/wiki/Q11190","display_name":"Medicine","level":0,"score":0.14569216966629028},{"id":"https://openalex.org/C115961682","wikidata":"https://www.wikidata.org/wiki/Q860623","display_name":"Image (mathematics)","level":2,"score":0.10184097290039062},{"id":"https://openalex.org/C142724271","wikidata":"https://www.wikidata.org/wiki/Q7208","display_name":"Pathology","level":1,"score":0.0},{"id":"https://openalex.org/C199360897","wikidata":"https://www.wikidata.org/wiki/Q9143","display_name":"Programming language","level":1,"score":0.0}],"mesh":[{"descriptor_ui":"D000069550","descriptor_name":"Machine Learning","qualifier_ui":null,"qualifier_name":null,"is_major_topic":true},{"descriptor_ui":"D000069550","descriptor_name":"Machine Learning","qualifier_ui":null,"qualifier_name":null,"is_major_topic":true},{"descriptor_ui":"D000069550","descriptor_name":"Machine Learning","qualifier_ui":null,"qualifier_name":null,"is_major_topic":true},{"descriptor_ui":"D000069550","descriptor_name":"Machine Learning","qualifier_ui":null,"qualifier_name":null,"is_major_topic":true},{"descriptor_ui":"D000465","descriptor_name":"Algorithms","qualifier_ui":null,"qualifier_name":null,"is_major_topic":true},{"descriptor_ui":"D000465","descriptor_name":"Algorithms","qualifier_ui":null,"qualifier_name":null,"is_major_topic":true},{"descriptor_ui":"D000465","descriptor_name":"Algorithms","qualifier_ui":null,"qualifier_name":null,"is_major_topic":true},{"descriptor_ui":"D000465","descriptor_name":"Algorithms","qualifier_ui":null,"qualifier_name":null,"is_major_topic":true}],"locations_count":4,"locations":[{"id":"doi:10.1093/bib/bbac207","is_oa":true,"landing_page_url":"https://doi.org/10.1093/bib/bbac207","pdf_url":"https://academic.oup.com/bib/article-pdf/23/4/bbac207/45016588/bbac207.pdf","source":{"id":"https://openalex.org/S91767247","display_name":"Briefings in Bioinformatics","issn_l":"1467-5463","issn":["1467-5463","1477-4054"],"is_oa":false,"is_in_doaj":true,"is_core":true,"host_organization":"https://openalex.org/P4310311648","host_organization_name":"Oxford University Press","host_organization_lineage":["https://openalex.org/P4310311648","https://openalex.org/P4310311647"],"host_organization_lineage_names":["Oxford University Press","University of Oxford"],"type":"journal"},"license":"cc-by","license_id":"https://openalex.org/licenses/cc-by","version":"publishedVersion","is_accepted":true,"is_published":true,"raw_source_name":"Briefings in Bioinformatics","raw_type":"journal-article"},{"id":"pmid:35679533","is_oa":false,"landing_page_url":"https://pubmed.ncbi.nlm.nih.gov/35679533","pdf_url":null,"source":{"id":"https://openalex.org/S4306525036","display_name":"PubMed","issn_l":null,"issn":null,"is_oa":false,"is_in_doaj":false,"is_core":false,"host_organization":"https://openalex.org/I1299303238","host_organization_name":"National Institutes of Health","host_organization_lineage":["https://openalex.org/I1299303238"],"host_organization_lineage_names":[],"type":"repository"},"license":null,"license_id":null,"version":"publishedVersion","is_accepted":true,"is_published":true,"raw_source_name":"Briefings in bioinformatics","raw_type":null},{"id":"pmh:oai:air.unimi.it:2434/930904","is_oa":true,"landing_page_url":"http://hdl.handle.net/2434/930904","pdf_url":null,"source":{"id":"https://openalex.org/S4306400516","display_name":"Archivio Istituzionale della Ricerca (Universita Degli Studi Di Milano)","issn_l":null,"issn":null,"is_oa":false,"is_in_doaj":false,"is_core":false,"host_organization":"https://openalex.org/I189158943","host_organization_name":"University of Milan","host_organization_lineage":["https://openalex.org/I189158943"],"host_organization_lineage_names":[],"type":"repository"},"license":"other-oa","license_id":"https://openalex.org/licenses/other-oa","version":"submittedVersion","is_accepted":false,"is_published":false,"raw_source_name":null,"raw_type":"info:eu-repo/semantics/article"},{"id":"pmh:oai:pubmedcentral.nih.gov:9294435","is_oa":true,"landing_page_url":"https://www.ncbi.nlm.nih.gov/pmc/articles/9294435","pdf_url":null,"source":{"id":"https://openalex.org/S2764455111","display_name":"PubMed Central","issn_l":null,"issn":null,"is_oa":false,"is_in_doaj":false,"is_core":false,"host_organization":"https://openalex.org/I1299303238","host_organization_name":"National Institutes of Health","host_organization_lineage":["https://openalex.org/I1299303238"],"host_organization_lineage_names":[],"type":"repository"},"license":"cc-by","license_id":"https://openalex.org/licenses/cc-by","version":"submittedVersion","is_accepted":false,"is_published":false,"raw_source_name":"Brief Bioinform","raw_type":"Text"}],"best_oa_location":{"id":"doi:10.1093/bib/bbac207","is_oa":true,"landing_page_url":"https://doi.org/10.1093/bib/bbac207","pdf_url":"https://academic.oup.com/bib/article-pdf/23/4/bbac207/45016588/bbac207.pdf","source":{"id":"https://openalex.org/S91767247","display_name":"Briefings in Bioinformatics","issn_l":"1467-5463","issn":["1467-5463","1477-4054"],"is_oa":false,"is_in_doaj":true,"is_core":true,"host_organization":"https://openalex.org/P4310311648","host_organization_name":"Oxford University Press","host_organization_lineage":["https://openalex.org/P4310311648","https://openalex.org/P4310311647"],"host_organization_lineage_names":["Oxford University Press","University of Oxford"],"type":"journal"},"license":"cc-by","license_id":"https://openalex.org/licenses/cc-by","version":"publishedVersion","is_accepted":true,"is_published":true,"raw_source_name":"Briefings in Bioinformatics","raw_type":"journal-article"},"sustainable_development_goals":[{"score":0.4300000071525574,"id":"https://metadata.un.org/sdg/4","display_name":"Quality Education"}],"awards":[{"id":"https://openalex.org/G1683500639","display_name":null,"funder_award_id":"BB/K004131/1","funder_id":"https://openalex.org/F4320334629","funder_display_name":"Biotechnology and Biological Sciences Research Council"},{"id":"https://openalex.org/G1779027865","display_name":null,"funder_award_id":"1660648","funder_id":"https://openalex.org/F4320306076","funder_display_name":"National Science Foundation"},{"id":"https://openalex.org/G1840770272","display_name":null,"funder_award_id":"E-26/","funder_id":"https://openalex.org/F4320322749","funder_display_name":"Funda\u00e7\u00e3o Carlos Chagas Filho de Amparo \u00e0 Pesquisa do Estado do Rio de Janeiro"},{"id":"https://openalex.org/G2739531393","display_name":null,"funder_award_id":"BB/M025047/1","funder_id":"https://openalex.org/F4320306076","funder_display_name":"National Science Foundation"},{"id":"https://openalex.org/G3081380025","display_name":null,"funder_award_id":"project","funder_id":"https://openalex.org/F4320321739","funder_display_name":"Consejo Nacional de Ciencia y Tecnolog\u00eda"},{"id":"https://openalex.org/G3091914005","display_name":null,"funder_award_id":"E-26/201.079/2021","funder_id":"https://openalex.org/F4320322749","funder_display_name":"Funda\u00e7\u00e3o Carlos Chagas Filho de Amparo \u00e0 Pesquisa do Estado do Rio de Janeiro"},{"id":"https://openalex.org/G3325778992","display_name":null,"funder_award_id":"E-26/201","funder_id":"https://openalex.org/F4320322749","funder_display_name":"Funda\u00e7\u00e3o Carlos Chagas Filho de Amparo \u00e0 Pesquisa do Estado do Rio de Janeiro"},{"id":"https://openalex.org/G3514550006","display_name":null,"funder_award_id":"Centre","funder_id":"https://openalex.org/F4320320300","funder_display_name":"European Commission"},{"id":"https://openalex.org/G3571901485","display_name":null,"funder_award_id":"BB/F00964X/1","funder_id":"https://openalex.org/F4320334629","funder_display_name":"Biotechnology and Biological Sciences Research Council"},{"id":"https://openalex.org/G4113670770","display_name":null,"funder_award_id":"MR/T001070/1","funder_id":"https://openalex.org/F4320324195","funder_display_name":"Medical Research Council Canada"},{"id":"https://openalex.org/G4696613433","display_name":"Development of a graph-theoretic approach to predict protein function by integrating large scale heterogeneous data","funder_award_id":"BB/F00964X/1","funder_id":"https://openalex.org/F4320334629","funder_display_name":"Biotechnology and Biological Sciences Research Council"},{"id":"https://openalex.org/G4937468798","display_name":null,"funder_award_id":"H2020","funder_id":"https://openalex.org/F4320320300","funder_display_name":"European Commission"},{"id":"https://openalex.org/G5515150595","display_name":"A GPU-based high performance system for discovering consensus domain architecture and functional annotation of protein families","funder_award_id":"BB/K004131/1","funder_id":"https://openalex.org/F4320334629","funder_display_name":"Biotechnology and Biological Sciences Research Council"},{"id":"https://openalex.org/G5667251700","display_name":"New advances in insecticide resistance genomics: using Machine Learning to predict resistance phenotype from large-scale genomic data.","funder_award_id":"MR/T001070/1","funder_id":"https://openalex.org/F4320334626","funder_display_name":"Medical Research Council"},{"id":"https://openalex.org/G5901534639","display_name":"Fibre-Optic Multi-parametric BIochemical Sensing Technology","funder_award_id":"660648","funder_id":"https://openalex.org/F4320320300","funder_display_name":"European Commission"},{"id":"https://openalex.org/G5921281487","display_name":null,"funder_award_id":"number","funder_id":"https://openalex.org/F4320306076","funder_display_name":"National Science Foundation"},{"id":"https://openalex.org/G6294885542","display_name":null,"funder_award_id":"BB/M025047/1","funder_id":"https://openalex.org/F4320334629","funder_display_name":"Biotechnology and Biological Sciences Research Council"},{"id":"https://openalex.org/G6353975132","display_name":"Bilateral NSF/BIO-BBSRC - Translational landscape to link cell growth with proliferation in the root meristem","funder_award_id":"BB/M025047/1","funder_id":"https://openalex.org/F4320334629","funder_display_name":"Biotechnology and Biological Sciences Research Council"},{"id":"https://openalex.org/G6468606693","display_name":null,"funder_award_id":"several","funder_id":"https://openalex.org/F4320322749","funder_display_name":"Funda\u00e7\u00e3o Carlos Chagas Filho de Amparo \u00e0 Pesquisa do Estado do Rio de Janeiro"},{"id":"https://openalex.org/G6507447573","display_name":null,"funder_award_id":"several","funder_id":"https://openalex.org/F4320306076","funder_display_name":"National Science Foundation"},{"id":"https://openalex.org/G6631104955","display_name":null,"funder_award_id":"MR/T001070/1","funder_id":"https://openalex.org/F4320334626","funder_display_name":"Medical Research Council"},{"id":"https://openalex.org/G7225185463","display_name":null,"funder_award_id":"260380","funder_id":"https://openalex.org/F4320322749","funder_display_name":"Funda\u00e7\u00e3o Carlos Chagas Filho de Amparo \u00e0 Pesquisa do Estado do Rio de Janeiro"},{"id":"https://openalex.org/G7339997994","display_name":null,"funder_award_id":"PSR2015-17","funder_id":"https://openalex.org/F4320313475","funder_display_name":"Universit\u00e0 degli Studi di Milano"},{"id":"https://openalex.org/G7848116841","display_name":null,"funder_award_id":"PSR2015-1720GVALE_01","funder_id":"https://openalex.org/F4320313475","funder_display_name":"Universit\u00e0 degli Studi di Milano"},{"id":"https://openalex.org/G7908228807","display_name":null,"funder_award_id":"Molecular","funder_id":"https://openalex.org/F4320306076","funder_display_name":"National Science Foundation"},{"id":"https://openalex.org/G8051717526","display_name":null,"funder_award_id":"Grant","funder_id":"https://openalex.org/F4320320300","funder_display_name":"European Commission"},{"id":"https://openalex.org/G8311313351","display_name":null,"funder_award_id":"H2020","funder_id":"https://openalex.org/F4320313475","funder_display_name":"Universit\u00e0 degli Studi di Milano"},{"id":"https://openalex.org/G848032724","display_name":null,"funder_award_id":"Science","funder_id":"https://openalex.org/F4320306076","funder_display_name":"National Science Foundation"},{"id":"https://openalex.org/G8858395165","display_name":null,"funder_award_id":"H2020","funder_id":"https://openalex.org/F4320332161","funder_display_name":"National Institutes of Health"}],"funders":[{"id":"https://openalex.org/F4320306076","display_name":"National Science Foundation","ror":"https://ror.org/021nxhr62"},{"id":"https://openalex.org/F4320310400","display_name":"Dartmouth College","ror":"https://ror.org/049s0rh22"},{"id":"https://openalex.org/F4320313475","display_name":"Universit\u00e0 degli Studi di Milano","ror":"https://ror.org/00wjc7c48"},{"id":"https://openalex.org/F4320316954","display_name":"Funda\u00e7\u00e3o Getulio Vargas","ror":"https://ror.org/01evzkn27"},{"id":"https://openalex.org/F4320320300","display_name":"European Commission","ror":"https://ror.org/00k4n6c32"},{"id":"https://openalex.org/F4320321739","display_name":"Consejo Nacional de Ciencia y Tecnolog\u00eda","ror":"https://ror.org/059ex5q34"},{"id":"https://openalex.org/F4320322015","display_name":"University of Toronto","ror":"https://ror.org/03dbr7087"},{"id":"https://openalex.org/F4320322749","display_name":"Funda\u00e7\u00e3o Carlos Chagas Filho de Amparo \u00e0 Pesquisa do Estado do Rio de Janeiro","ror":"https://ror.org/03kk0s825"},{"id":"https://openalex.org/F4320324195","display_name":"Medical Research Council Canada","ror":"https://ror.org/01gavpb45"},{"id":"https://openalex.org/F4320332161","display_name":"National Institutes of Health","ror":"https://ror.org/01cwqze88"},{"id":"https://openalex.org/F4320332167","display_name":"Directorate for Biological Sciences","ror":"https://ror.org/001xhss06"},{"id":"https://openalex.org/F4320332999","display_name":"Horizon 2020 Framework Programme","ror":"https://ror.org/00k4n6c32"},{"id":"https://openalex.org/F4320334626","display_name":"Medical Research Council","ror":"https://ror.org/03x94j517"},{"id":"https://openalex.org/F4320334629","display_name":"Biotechnology and Biological Sciences Research Council","ror":"https://ror.org/00cwqg982"},{"id":"https://openalex.org/F4320334701","display_name":"Joint Research Centre","ror":"https://ror.org/04j5wtv36"},{"id":"https://openalex.org/F4320335935","display_name":"Royal Holloway, University of London","ror":"https://ror.org/04g2vpn86"}],"has_content":{"pdf":true,"grobid_xml":true},"content_urls":{"pdf":"https://content.openalex.org/works/W4282913188.pdf","grobid_xml":"https://content.openalex.org/works/W4282913188.grobid-xml"},"referenced_works_count":193,"referenced_works":["https://openalex.org/W28412257","https://openalex.org/W87092222","https://openalex.org/W116606925","https://openalex.org/W236448318","https://openalex.org/W1527559133","https://openalex.org/W1539811621","https://openalex.org/W1548779692","https://openalex.org/W1755563775","https://openalex.org/W1839682376","https://openalex.org/W1845880232","https://openalex.org/W1902027874","https://openalex.org/W1908864745","https://openalex.org/W1958673254","https://openalex.org/W1967220865","https://openalex.org/W1968206427","https://openalex.org/W1975619936","https://openalex.org/W1980649683","https://openalex.org/W1984838032","https://openalex.org/W1987219048","https://openalex.org/W1991840148","https://openalex.org/W2002036160","https://openalex.org/W2008929650","https://openalex.org/W2019024625","https://openalex.org/W2023461603","https://openalex.org/W2029701245","https://openalex.org/W2030105242","https://openalex.org/W2038706020","https://openalex.org/W2041657594","https://openalex.org/W2043842833","https://openalex.org/W2044702943","https://openalex.org/W2045156863","https://openalex.org/W2060166505","https://openalex.org/W2062533676","https://openalex.org/W2062649377","https://openalex.org/W2065760681","https://openalex.org/W2066531004","https://openalex.org/W2071813447","https://openalex.org/W2073503722","https://openalex.org/W2074973972","https://openalex.org/W2077525424","https://openalex.org/W2078524519","https://openalex.org/W2081043824","https://openalex.org/W2087922064","https://openalex.org/W2088338744","https://openalex.org/W2090890710","https://openalex.org/W2095763169","https://openalex.org/W2095780288","https://openalex.org/W2096283457","https://openalex.org/W2098352728","https://openalex.org/W2101057528","https://openalex.org/W2105295920","https://openalex.org/W2105717378","https://openalex.org/W2108119513","https://openalex.org/W2109743529","https://openalex.org/W2110464963","https://openalex.org/W2113573459","https://openalex.org/W2115462905","https://openalex.org/W2116662982","https://openalex.org/W2117968640","https://openalex.org/W2118501516","https://openalex.org/W2118718620","https://openalex.org/W2122197732","https://openalex.org/W2123403527","https://openalex.org/W2123649031","https://openalex.org/W2131123443","https://openalex.org/W2131987814","https://openalex.org/W2134179844","https://openalex.org/W2134469465","https://openalex.org/W2135670417","https://openalex.org/W2136787567","https://openalex.org/W2139967559","https://openalex.org/W2140095548","https://openalex.org/W2141599838","https://openalex.org/W2154872931","https://openalex.org/W2156247618","https://openalex.org/W2156505030","https://openalex.org/W2158703410","https://openalex.org/W2158821123","https://openalex.org/W2161444669","https://openalex.org/W2163811370","https://openalex.org/W2167769381","https://openalex.org/W2169278871","https://openalex.org/W2170567676","https://openalex.org/W2171304795","https://openalex.org/W2180374961","https://openalex.org/W2185729964","https://openalex.org/W2264481086","https://openalex.org/W2277837261","https://openalex.org/W2297410961","https://openalex.org/W2297689156","https://openalex.org/W2307267906","https://openalex.org/W2308071406","https://openalex.org/W2320656788","https://openalex.org/W2335460486","https://openalex.org/W2342662445","https://openalex.org/W2415103133","https://openalex.org/W2418684121","https://openalex.org/W2477988750","https://openalex.org/W2512558912","https://openalex.org/W2556086109","https://openalex.org/W2556691545","https://openalex.org/W2560367415","https://openalex.org/W2560674852","https://openalex.org/W2567080747","https://openalex.org/W2592665192","https://openalex.org/W2605944716","https://openalex.org/W2617515964","https://openalex.org/W2619383789","https://openalex.org/W2624701078","https://openalex.org/W2728397260","https://openalex.org/W2765654979","https://openalex.org/W2765886152","https://openalex.org/W2766525247","https://openalex.org/W2767092306","https://openalex.org/W2768109521","https://openalex.org/W2776619248","https://openalex.org/W2798149936","https://openalex.org/W2801455852","https://openalex.org/W2803035327","https://openalex.org/W2804488518","https://openalex.org/W2807280338","https://openalex.org/W2823192646","https://openalex.org/W2838664376","https://openalex.org/W2884724578","https://openalex.org/W2888562574","https://openalex.org/W2892587974","https://openalex.org/W2903112826","https://openalex.org/W2906107882","https://openalex.org/W2909364225","https://openalex.org/W2909472027","https://openalex.org/W2911964244","https://openalex.org/W2913710075","https://openalex.org/W2914287897","https://openalex.org/W2914746407","https://openalex.org/W2917548494","https://openalex.org/W2920197611","https://openalex.org/W2924357470","https://openalex.org/W2925177113","https://openalex.org/W2949124855","https://openalex.org/W2950878899","https://openalex.org/W2950942463","https://openalex.org/W2950985821","https://openalex.org/W2951531839","https://openalex.org/W2951813019","https://openalex.org/W2952939467","https://openalex.org/W2955502047","https://openalex.org/W2963144883","https://openalex.org/W2963550944","https://openalex.org/W2964053582","https://openalex.org/W2968437918","https://openalex.org/W2973636381","https://openalex.org/W2990488424","https://openalex.org/W2999905431","https://openalex.org/W3003192283","https://openalex.org/W3010511947","https://openalex.org/W3027051073","https://openalex.org/W3031003892","https://openalex.org/W3034111501","https://openalex.org/W3037826211","https://openalex.org/W3046566989","https://openalex.org/W3049013229","https://openalex.org/W3080274572","https://openalex.org/W3085331870","https://openalex.org/W3092565706","https://openalex.org/W3096413426","https://openalex.org/W3100779497","https://openalex.org/W3103523530","https://openalex.org/W3107862034","https://openalex.org/W3115616719","https://openalex.org/W3135499953","https://openalex.org/W3139939952","https://openalex.org/W3188650259","https://openalex.org/W3198822979","https://openalex.org/W4206174637","https://openalex.org/W4210728747","https://openalex.org/W4252676770","https://openalex.org/W4292053589","https://openalex.org/W6604791420","https://openalex.org/W6639408265","https://openalex.org/W6655307161","https://openalex.org/W6675576870","https://openalex.org/W6677759377","https://openalex.org/W6679958419","https://openalex.org/W6682644385","https://openalex.org/W6682921674","https://openalex.org/W6693376572","https://openalex.org/W6698240980","https://openalex.org/W6731476941","https://openalex.org/W6782279008","https://openalex.org/W6782967877","https://openalex.org/W6786624587","https://openalex.org/W6787856409","https://openalex.org/W6801137549"],"related_works":["https://openalex.org/W4200407670","https://openalex.org/W3037909725","https://openalex.org/W2787993192","https://openalex.org/W2375480909","https://openalex.org/W2158269427","https://openalex.org/W4381280689","https://openalex.org/W2353314428","https://openalex.org/W3014749029","https://openalex.org/W4252478283","https://openalex.org/W4285502407"],"abstract_inverted_index":{"Patient":[0],"similarity":[1,146],"networks":[2,24],"(PSNs),":[3],"where":[4],"patients":[5,33,99],"are":[6,16],"represented":[7],"as":[8,13,205,207],"nodes":[9],"and":[10,34,51,71,213],"their":[11],"similarities":[12],"weighted":[14],"edges,":[15],"being":[17],"increasingly":[18],"used":[19,196],"in":[20,117,159],"clinical":[21,211],"research.":[22],"These":[23],"provide":[25],"an":[26],"insightful":[27],"summary":[28],"of":[29,47,75,77,87,96,111],"the":[30,45,78,97,109,143,160,178],"relationships":[31],"among":[32],"can":[35,55],"be":[36,57,195],"exploited":[37],"by":[38,81],"inductive":[39],"or":[40],"transductive":[41],"learning":[42,83,162,181],"algorithms":[43],"for":[44,108,115,132],"prediction":[46],"patient":[48,69,145],"outcome,":[49],"phenotype":[50],"disease":[52],"risk.":[53],"PSNs":[54,116],"also":[56,153],"easily":[58],"visualized,":[59],"thus":[60,172],"offering":[61],"a":[62,174],"natural":[63],"way":[64],"to":[65,92,119,138,170,176,197],"inspect":[66],"complex":[67],"heterogeneous":[68,123,200],"data":[70,112,136,204,208],"providing":[72,173],"some":[73],"level":[74],"explainability":[76],"predictions":[79],"obtained":[80],"machine":[82,161,180],"algorithms.":[84],"The":[85],"advent":[86],"high-throughput":[88],"technologies,":[89],"enabling":[90],"us":[91],"acquire":[93],"high-dimensional":[94],"views":[95,137],"same":[98],"(e.g.":[100],"omics":[101],"data,":[102,104],"laboratory":[103],"imaging":[105],"data),":[106],"calls":[107],"development":[110],"fusion":[113],"techniques":[114],"order":[118],"leverage":[120],"this":[121,126,185],"rich":[122],"information.":[124],"In":[125,187],"article,":[127],"we":[128,189],"review":[129,154],"existing":[130,183],"methods":[131,155,192],"integrating":[133],"multiple":[134],"biomedical":[135],"construct":[139],"PSNs,":[140,171],"together":[141],"with":[142],"different":[144],"measures":[147],"that":[148,156,193],"have":[149,157,165],"been":[150,168],"proposed.":[151],"We":[152],"appeared":[158],"literature":[163,182],"but":[164],"not":[166],"yet":[167],"applied":[169],"resource":[175],"navigate":[177],"vast":[179],"on":[184,191],"topic.":[186],"particular,":[188],"focus":[190],"could":[194],"integrate":[198],"very":[199],"datasets,":[201],"including":[202],"multi-omics":[203],"well":[206],"derived":[209],"from":[210],"information":[212],"medical":[214],"imaging.":[215]},"counts_by_year":[{"year":2025,"cited_by_count":12},{"year":2024,"cited_by_count":11},{"year":2023,"cited_by_count":9},{"year":2022,"cited_by_count":2}],"updated_date":"2026-04-10T15:06:20.359241","created_date":"2025-10-10T00:00:00"}
