{"id":"https://openalex.org/W4226344063","doi":"https://doi.org/10.1093/bib/bbac124","title":"Signaling repurposable drug combinations against COVID-19 by developing the heterogeneous deep herb-graph method","display_name":"Signaling repurposable drug combinations against COVID-19 by developing the heterogeneous deep herb-graph method","publication_year":2022,"publication_date":"2022-03-21","ids":{"openalex":"https://openalex.org/W4226344063","doi":"https://doi.org/10.1093/bib/bbac124","pmid":"https://pubmed.ncbi.nlm.nih.gov/35514205"},"language":"en","primary_location":{"id":"doi:10.1093/bib/bbac124","is_oa":false,"landing_page_url":"https://doi.org/10.1093/bib/bbac124","pdf_url":null,"source":{"id":"https://openalex.org/S91767247","display_name":"Briefings in Bioinformatics","issn_l":"1467-5463","issn":["1467-5463","1477-4054"],"is_oa":false,"is_in_doaj":true,"is_core":true,"host_organization":"https://openalex.org/P4310311648","host_organization_name":"Oxford University Press","host_organization_lineage":["https://openalex.org/P4310311648","https://openalex.org/P4310311647"],"host_organization_lineage_names":["Oxford University Press","University of Oxford"],"type":"journal"},"license":null,"license_id":null,"version":"publishedVersion","is_accepted":true,"is_published":true,"raw_source_name":"Briefings in Bioinformatics","raw_type":"journal-article"},"type":"article","indexed_in":["crossref","doaj","pubmed"],"open_access":{"is_oa":false,"oa_status":"closed","oa_url":null,"any_repository_has_fulltext":false},"authorships":[{"author_position":"first","author":{"id":"https://openalex.org/A5100637346","display_name":"Fan Yang","orcid":"https://orcid.org/0000-0003-0717-5420"},"institutions":[{"id":"https://openalex.org/I154099455","display_name":"Shandong University","ror":"https://ror.org/0207yh398","country_code":"CN","type":"education","lineage":["https://openalex.org/I154099455"]}],"countries":["CN"],"is_corresponding":true,"raw_author_name":"Fan Yang","raw_affiliation_strings":["The Department of Epidemiology and Biostatistics , School of Public Health, Cheeloo College of Medicine, Shandong University, China"],"raw_orcid":null,"affiliations":[{"raw_affiliation_string":"The Department of Epidemiology and Biostatistics , School of Public Health, Cheeloo College of Medicine, Shandong University, China","institution_ids":["https://openalex.org/I154099455"]}]},{"author_position":"middle","author":{"id":"https://openalex.org/A5021989545","display_name":"Shuaijie Zhang","orcid":"https://orcid.org/0009-0002-4992-8398"},"institutions":[{"id":"https://openalex.org/I154099455","display_name":"Shandong University","ror":"https://ror.org/0207yh398","country_code":"CN","type":"education","lineage":["https://openalex.org/I154099455"]}],"countries":["CN"],"is_corresponding":false,"raw_author_name":"Shuaijie Zhang","raw_affiliation_strings":["The Department of Epidemiology and Biostatistics , School of Public Health, Cheeloo College of Medicine, Shandong University, China"],"raw_orcid":null,"affiliations":[{"raw_affiliation_string":"The Department of Epidemiology and Biostatistics , School of Public Health, Cheeloo College of Medicine, Shandong University, China","institution_ids":["https://openalex.org/I154099455"]}]},{"author_position":"middle","author":{"id":"https://openalex.org/A5064604717","display_name":"Wei Pan","orcid":"https://orcid.org/0000-0002-2281-8749"},"institutions":[{"id":"https://openalex.org/I154099455","display_name":"Shandong University","ror":"https://ror.org/0207yh398","country_code":"CN","type":"education","lineage":["https://openalex.org/I154099455"]}],"countries":["CN"],"is_corresponding":false,"raw_author_name":"Wei Pan","raw_affiliation_strings":["The Department of Epidemiology and Biostatistics , School of Public Health, Cheeloo College of Medicine, Shandong University, China"],"raw_orcid":null,"affiliations":[{"raw_affiliation_string":"The Department of Epidemiology and Biostatistics , School of Public Health, Cheeloo College of Medicine, Shandong University, China","institution_ids":["https://openalex.org/I154099455"]}]},{"author_position":"middle","author":{"id":"https://openalex.org/A5084726822","display_name":"Ruiyuan Yao","orcid":"https://orcid.org/0000-0002-5422-2843"},"institutions":[{"id":"https://openalex.org/I134738993","display_name":"Shandong University of Traditional Chinese Medicine","ror":"https://ror.org/0523y5c19","country_code":"CN","type":"education","lineage":["https://openalex.org/I134738993"]}],"countries":["CN"],"is_corresponding":false,"raw_author_name":"Ruiyuan Yao","raw_affiliation_strings":["Shandong University of Traditional Chinese Medicine , Jinan, China"],"raw_orcid":null,"affiliations":[{"raw_affiliation_string":"Shandong University of Traditional Chinese Medicine , Jinan, China","institution_ids":["https://openalex.org/I134738993"]}]},{"author_position":"middle","author":{"id":"https://openalex.org/A5100381060","display_name":"Weiguo Zhang","orcid":"https://orcid.org/0000-0003-3899-6475"},"institutions":[{"id":"https://openalex.org/I134738993","display_name":"Shandong University of Traditional Chinese Medicine","ror":"https://ror.org/0523y5c19","country_code":"CN","type":"education","lineage":["https://openalex.org/I134738993"]}],"countries":["CN"],"is_corresponding":false,"raw_author_name":"Weiguo Zhang","raw_affiliation_strings":["Shandong University of Traditional Chinese Medicine , Jinan, China"],"raw_orcid":null,"affiliations":[{"raw_affiliation_string":"Shandong University of Traditional Chinese Medicine , Jinan, China","institution_ids":["https://openalex.org/I134738993"]}]},{"author_position":"middle","author":{"id":"https://openalex.org/A5049750015","display_name":"Yanchun Zhang","orcid":"https://orcid.org/0000-0002-5094-5980"},"institutions":[{"id":"https://openalex.org/I4210136793","display_name":"Peng Cheng Laboratory","ror":"https://ror.org/03qdqbt06","country_code":"CN","type":"facility","lineage":["https://openalex.org/I4210136793"]},{"id":"https://openalex.org/I71270174","display_name":"Victoria University","ror":"https://ror.org/04j757h98","country_code":"AU","type":"education","lineage":["https://openalex.org/I71270174"]}],"countries":["AU","CN"],"is_corresponding":false,"raw_author_name":"Yanchun Zhang","raw_affiliation_strings":["Institute for Sustainable Industries & Liveable Cities , Victoria University, Australia; The Department of New Networks, Peng Cheng Laboratory, Shenzhen, China","Institute for Sustainable Industries & Liveable Cities, Victoria University, Australia"],"raw_orcid":null,"affiliations":[{"raw_affiliation_string":"Institute for Sustainable Industries & Liveable Cities , Victoria University, Australia; The Department of New Networks, Peng Cheng Laboratory, Shenzhen, China","institution_ids":["https://openalex.org/I4210136793","https://openalex.org/I71270174"]},{"raw_affiliation_string":"Institute for Sustainable Industries & Liveable Cities, Victoria University, Australia","institution_ids":["https://openalex.org/I71270174"]}]},{"author_position":"middle","author":{"id":"https://openalex.org/A5031220156","display_name":"Guoyin Wang","orcid":"https://orcid.org/0000-0002-8521-5232"},"institutions":[{"id":"https://openalex.org/I10535382","display_name":"Chongqing University of Posts and Telecommunications","ror":"https://ror.org/03dgaqz26","country_code":"CN","type":"education","lineage":["https://openalex.org/I10535382"]}],"countries":["CN"],"is_corresponding":false,"raw_author_name":"Guoyin Wang","raw_affiliation_strings":["Chongqing Key Laboratory of Computational Intelligence , Chongqing University of Posts and Telecommunications, Chongqing, China"],"raw_orcid":null,"affiliations":[{"raw_affiliation_string":"Chongqing Key Laboratory of Computational Intelligence , Chongqing University of Posts and Telecommunications, Chongqing, China","institution_ids":["https://openalex.org/I10535382"]}]},{"author_position":"middle","author":{"id":"https://openalex.org/A5064829196","display_name":"Qianghua Zhang","orcid":null},"institutions":[{"id":"https://openalex.org/I10535382","display_name":"Chongqing University of Posts and Telecommunications","ror":"https://ror.org/03dgaqz26","country_code":"CN","type":"education","lineage":["https://openalex.org/I10535382"]}],"countries":["CN"],"is_corresponding":false,"raw_author_name":"Qianghua Zhang","raw_affiliation_strings":["Chongqing Key Laboratory of Computational Intelligence , Chongqing University of Posts and Telecommunications, Chongqing, China"],"raw_orcid":null,"affiliations":[{"raw_affiliation_string":"Chongqing Key Laboratory of Computational Intelligence , Chongqing University of Posts and Telecommunications, Chongqing, China","institution_ids":["https://openalex.org/I10535382"]}]},{"author_position":"middle","author":{"id":"https://openalex.org/A5101963123","display_name":"Yunlong Cheng","orcid":"https://orcid.org/0000-0002-9940-5109"},"institutions":[{"id":"https://openalex.org/I10535382","display_name":"Chongqing University of Posts and Telecommunications","ror":"https://ror.org/03dgaqz26","country_code":"CN","type":"education","lineage":["https://openalex.org/I10535382"]}],"countries":["CN"],"is_corresponding":false,"raw_author_name":"Yunlong Cheng","raw_affiliation_strings":["Chongqing Key Laboratory of Computational Intelligence , Chongqing University of Posts and Telecommunications, Chongqing, China"],"raw_orcid":null,"affiliations":[{"raw_affiliation_string":"Chongqing Key Laboratory of Computational Intelligence , Chongqing University of Posts and Telecommunications, Chongqing, China","institution_ids":["https://openalex.org/I10535382"]}]},{"author_position":"middle","author":{"id":"https://openalex.org/A5073394107","display_name":"Jihua Dong","orcid":"https://orcid.org/0000-0001-7864-2319"},"institutions":[{"id":"https://openalex.org/I154099455","display_name":"Shandong University","ror":"https://ror.org/0207yh398","country_code":"CN","type":"education","lineage":["https://openalex.org/I154099455"]}],"countries":["CN"],"is_corresponding":false,"raw_author_name":"Jihua Dong","raw_affiliation_strings":["The School of Foreign Languages and Literature , Shandong University"],"raw_orcid":null,"affiliations":[{"raw_affiliation_string":"The School of Foreign Languages and Literature , Shandong University","institution_ids":["https://openalex.org/I154099455"]}]},{"author_position":"middle","author":{"id":"https://openalex.org/A5039364205","display_name":"Chunyang Ruan","orcid":"https://orcid.org/0000-0002-6280-0148"},"institutions":[{"id":"https://openalex.org/I11406153","display_name":"Shanghai International Studies University","ror":"https://ror.org/01bn89z48","country_code":"CN","type":"education","lineage":["https://openalex.org/I11406153"]}],"countries":["CN"],"is_corresponding":false,"raw_author_name":"Chunyang Ruan","raw_affiliation_strings":["Department of Data Science and Big Data Technology , Shanghai International Studies University, Shanghai, 200083, China"],"raw_orcid":null,"affiliations":[{"raw_affiliation_string":"Department of Data Science and Big Data Technology , Shanghai International Studies University, Shanghai, 200083, China","institution_ids":["https://openalex.org/I11406153"]}]},{"author_position":"middle","author":{"id":"https://openalex.org/A5101414718","display_name":"Lizhen Cui","orcid":"https://orcid.org/0000-0002-8262-8883"},"institutions":[{"id":"https://openalex.org/I154099455","display_name":"Shandong University","ror":"https://ror.org/0207yh398","country_code":"CN","type":"education","lineage":["https://openalex.org/I154099455"]}],"countries":["CN"],"is_corresponding":false,"raw_author_name":"Lizhen Cui","raw_affiliation_strings":["School of Software , Shandong University, Jinan, China"],"raw_orcid":null,"affiliations":[{"raw_affiliation_string":"School of Software , Shandong University, Jinan, China","institution_ids":["https://openalex.org/I154099455"]}]},{"author_position":"middle","author":{"id":"https://openalex.org/A5036176693","display_name":"Hao Wu","orcid":"https://orcid.org/0000-0003-2340-9258"},"institutions":[{"id":"https://openalex.org/I154099455","display_name":"Shandong University","ror":"https://ror.org/0207yh398","country_code":"CN","type":"education","lineage":["https://openalex.org/I154099455"]}],"countries":["CN"],"is_corresponding":true,"raw_author_name":"Hao Wu","raw_affiliation_strings":["School of Software , Shandong University, Jinan, China"],"raw_orcid":null,"affiliations":[{"raw_affiliation_string":"School of Software , Shandong University, Jinan, China","institution_ids":["https://openalex.org/I154099455"]}]},{"author_position":"last","author":{"id":"https://openalex.org/A5052596350","display_name":"Fuzhong Xue","orcid":"https://orcid.org/0000-0003-0378-7956"},"institutions":[{"id":"https://openalex.org/I154099455","display_name":"Shandong University","ror":"https://ror.org/0207yh398","country_code":"CN","type":"education","lineage":["https://openalex.org/I154099455"]}],"countries":["CN"],"is_corresponding":true,"raw_author_name":"Fuzhong Xue","raw_affiliation_strings":["The Department of Epidemiology and Biostatistics , School of Public Health, Cheeloo College of Medicine, Shandong University, China"],"raw_orcid":null,"affiliations":[{"raw_affiliation_string":"The Department of Epidemiology and Biostatistics , School of Public Health, Cheeloo College of Medicine, Shandong University, China","institution_ids":["https://openalex.org/I154099455"]}]}],"institutions":[],"countries_distinct_count":2,"institutions_distinct_count":14,"corresponding_author_ids":["https://openalex.org/A5036176693","https://openalex.org/A5052596350","https://openalex.org/A5100637346"],"corresponding_institution_ids":["https://openalex.org/I154099455"],"apc_list":{"value":4011,"currency":"USD","value_usd":4011},"apc_paid":null,"fwci":1.2177,"has_fulltext":false,"cited_by_count":8,"citation_normalized_percentile":{"value":0.81190215,"is_in_top_1_percent":false,"is_in_top_10_percent":false},"cited_by_percentile_year":{"min":90,"max":98},"biblio":{"volume":"23","issue":"5","first_page":null,"last_page":null},"is_retracted":false,"is_paratext":false,"is_xpac":false,"primary_topic":{"id":"https://openalex.org/T10211","display_name":"Computational Drug Discovery Methods","score":0.9412000179290771,"subfield":{"id":"https://openalex.org/subfields/1703","display_name":"Computational Theory and Mathematics"},"field":{"id":"https://openalex.org/fields/17","display_name":"Computer Science"},"domain":{"id":"https://openalex.org/domains/3","display_name":"Physical Sciences"}},"topics":[{"id":"https://openalex.org/T10211","display_name":"Computational Drug Discovery Methods","score":0.9412000179290771,"subfield":{"id":"https://openalex.org/subfields/1703","display_name":"Computational Theory and Mathematics"},"field":{"id":"https://openalex.org/fields/17","display_name":"Computer Science"},"domain":{"id":"https://openalex.org/domains/3","display_name":"Physical Sciences"}},{"id":"https://openalex.org/T10887","display_name":"Bioinformatics and Genomic Networks","score":0.009399999864399433,"subfield":{"id":"https://openalex.org/subfields/1312","display_name":"Molecular Biology"},"field":{"id":"https://openalex.org/fields/13","display_name":"Biochemistry, Genetics and Molecular Biology"},"domain":{"id":"https://openalex.org/domains/1","display_name":"Life Sciences"}},{"id":"https://openalex.org/T12023","display_name":"Cholinesterase and Neurodegenerative Diseases","score":0.003800000064074993,"subfield":{"id":"https://openalex.org/subfields/2736","display_name":"Pharmacology"},"field":{"id":"https://openalex.org/fields/27","display_name":"Medicine"},"domain":{"id":"https://openalex.org/domains/4","display_name":"Health Sciences"}}],"keywords":[{"id":"https://openalex.org/keywords/drug-repositioning","display_name":"Drug repositioning","score":0.809938907623291},{"id":"https://openalex.org/keywords/repurposing","display_name":"Repurposing","score":0.6390104293823242},{"id":"https://openalex.org/keywords/graph","display_name":"Graph","score":0.5132924914360046},{"id":"https://openalex.org/keywords/drug-discovery","display_name":"Drug discovery","score":0.49907755851745605},{"id":"https://openalex.org/keywords/computer-science","display_name":"Computer science","score":0.485897958278656},{"id":"https://openalex.org/keywords/virtual-screening","display_name":"Virtual screening","score":0.4722708463668823},{"id":"https://openalex.org/keywords/coronavirus-disease-2019","display_name":"Coronavirus disease 2019 (COVID-19)","score":0.4285829961299896},{"id":"https://openalex.org/keywords/drug","display_name":"Drug","score":0.40793031454086304},{"id":"https://openalex.org/keywords/computational-biology","display_name":"Computational biology","score":0.3851393163204193},{"id":"https://openalex.org/keywords/medicine","display_name":"Medicine","score":0.30478399991989136},{"id":"https://openalex.org/keywords/pharmacology","display_name":"Pharmacology","score":0.24559444189071655},{"id":"https://openalex.org/keywords/bioinformatics","display_name":"Bioinformatics","score":0.20904222130775452},{"id":"https://openalex.org/keywords/disease","display_name":"Disease","score":0.18829014897346497},{"id":"https://openalex.org/keywords/infectious-disease","display_name":"Infectious disease (medical specialty)","score":0.15404635667800903},{"id":"https://openalex.org/keywords/theoretical-computer-science","display_name":"Theoretical computer science","score":0.1421787440776825},{"id":"https://openalex.org/keywords/biology","display_name":"Biology","score":0.14041221141815186}],"concepts":[{"id":"https://openalex.org/C103637391","wikidata":"https://www.wikidata.org/wiki/Q5308921","display_name":"Drug repositioning","level":3,"score":0.809938907623291},{"id":"https://openalex.org/C519536355","wikidata":"https://www.wikidata.org/wiki/Q21021151","display_name":"Repurposing","level":2,"score":0.6390104293823242},{"id":"https://openalex.org/C132525143","wikidata":"https://www.wikidata.org/wiki/Q141488","display_name":"Graph","level":2,"score":0.5132924914360046},{"id":"https://openalex.org/C74187038","wikidata":"https://www.wikidata.org/wiki/Q1418791","display_name":"Drug discovery","level":2,"score":0.49907755851745605},{"id":"https://openalex.org/C41008148","wikidata":"https://www.wikidata.org/wiki/Q21198","display_name":"Computer science","level":0,"score":0.485897958278656},{"id":"https://openalex.org/C103697762","wikidata":"https://www.wikidata.org/wiki/Q4112105","display_name":"Virtual screening","level":3,"score":0.4722708463668823},{"id":"https://openalex.org/C3008058167","wikidata":"https://www.wikidata.org/wiki/Q84263196","display_name":"Coronavirus disease 2019 (COVID-19)","level":4,"score":0.4285829961299896},{"id":"https://openalex.org/C2780035454","wikidata":"https://www.wikidata.org/wiki/Q8386","display_name":"Drug","level":2,"score":0.40793031454086304},{"id":"https://openalex.org/C70721500","wikidata":"https://www.wikidata.org/wiki/Q177005","display_name":"Computational biology","level":1,"score":0.3851393163204193},{"id":"https://openalex.org/C71924100","wikidata":"https://www.wikidata.org/wiki/Q11190","display_name":"Medicine","level":0,"score":0.30478399991989136},{"id":"https://openalex.org/C98274493","wikidata":"https://www.wikidata.org/wiki/Q128406","display_name":"Pharmacology","level":1,"score":0.24559444189071655},{"id":"https://openalex.org/C60644358","wikidata":"https://www.wikidata.org/wiki/Q128570","display_name":"Bioinformatics","level":1,"score":0.20904222130775452},{"id":"https://openalex.org/C2779134260","wikidata":"https://www.wikidata.org/wiki/Q12136","display_name":"Disease","level":2,"score":0.18829014897346497},{"id":"https://openalex.org/C524204448","wikidata":"https://www.wikidata.org/wiki/Q788926","display_name":"Infectious disease (medical specialty)","level":3,"score":0.15404635667800903},{"id":"https://openalex.org/C80444323","wikidata":"https://www.wikidata.org/wiki/Q2878974","display_name":"Theoretical computer science","level":1,"score":0.1421787440776825},{"id":"https://openalex.org/C86803240","wikidata":"https://www.wikidata.org/wiki/Q420","display_name":"Biology","level":0,"score":0.14041221141815186},{"id":"https://openalex.org/C18903297","wikidata":"https://www.wikidata.org/wiki/Q7150","display_name":"Ecology","level":1,"score":0.0},{"id":"https://openalex.org/C142724271","wikidata":"https://www.wikidata.org/wiki/Q7208","display_name":"Pathology","level":1,"score":0.0}],"mesh":[{"descriptor_ui":"D000086402","descriptor_name":"SARS-CoV-2","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D000086402","descriptor_name":"SARS-CoV-2","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D000086402","descriptor_name":"SARS-CoV-2","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D000093485","descriptor_name":"COVID-19 Drug Treatment","qualifier_ui":null,"qualifier_name":null,"is_major_topic":true},{"descriptor_ui":"D000093485","descriptor_name":"COVID-19 Drug Treatment","qualifier_ui":null,"qualifier_name":null,"is_major_topic":true},{"descriptor_ui":"D000093485","descriptor_name":"COVID-19 Drug Treatment","qualifier_ui":null,"qualifier_name":null,"is_major_topic":true},{"descriptor_ui":"D004338","descriptor_name":"Drug Combinations","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D004338","descriptor_name":"Drug Combinations","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D004338","descriptor_name":"Drug Combinations","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D006801","descriptor_name":"Humans","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D006801","descriptor_name":"Humans","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D006801","descriptor_name":"Humans","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D015507","descriptor_name":"Drugs, Investigational","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D015507","descriptor_name":"Drugs, Investigational","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D015507","descriptor_name":"Drugs, Investigational","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D058492","descriptor_name":"Drug Repositioning","qualifier_ui":"Q000379","qualifier_name":"methods","is_major_topic":false},{"descriptor_ui":"D058492","descriptor_name":"Drug Repositioning","qualifier_ui":"Q000379","qualifier_name":"methods","is_major_topic":false},{"descriptor_ui":"D058492","descriptor_name":"Drug Repositioning","qualifier_ui":"Q000379","qualifier_name":"methods","is_major_topic":false}],"locations_count":2,"locations":[{"id":"doi:10.1093/bib/bbac124","is_oa":false,"landing_page_url":"https://doi.org/10.1093/bib/bbac124","pdf_url":null,"source":{"id":"https://openalex.org/S91767247","display_name":"Briefings in Bioinformatics","issn_l":"1467-5463","issn":["1467-5463","1477-4054"],"is_oa":false,"is_in_doaj":true,"is_core":true,"host_organization":"https://openalex.org/P4310311648","host_organization_name":"Oxford University Press","host_organization_lineage":["https://openalex.org/P4310311648","https://openalex.org/P4310311647"],"host_organization_lineage_names":["Oxford University Press","University of Oxford"],"type":"journal"},"license":null,"license_id":null,"version":"publishedVersion","is_accepted":true,"is_published":true,"raw_source_name":"Briefings in Bioinformatics","raw_type":"journal-article"},{"id":"pmid:35514205","is_oa":false,"landing_page_url":"https://pubmed.ncbi.nlm.nih.gov/35514205","pdf_url":null,"source":{"id":"https://openalex.org/S4306525036","display_name":"PubMed","issn_l":null,"issn":null,"is_oa":false,"is_in_doaj":false,"is_core":false,"host_organization":"https://openalex.org/I1299303238","host_organization_name":"National Institutes of Health","host_organization_lineage":["https://openalex.org/I1299303238"],"host_organization_lineage_names":[],"type":"repository"},"license":null,"license_id":null,"version":"publishedVersion","is_accepted":true,"is_published":true,"raw_source_name":"Briefings in bioinformatics","raw_type":null}],"best_oa_location":null,"sustainable_development_goals":[{"id":"https://metadata.un.org/sdg/3","score":0.8100000023841858,"display_name":"Good health and well-being"}],"awards":[],"funders":[],"has_content":{"grobid_xml":false,"pdf":false},"content_urls":null,"referenced_works_count":90,"referenced_works":["https://openalex.org/W342285082","https://openalex.org/W1544009106","https://openalex.org/W1987710883","https://openalex.org/W2006446655","https://openalex.org/W2053186076","https://openalex.org/W2055835086","https://openalex.org/W2064099652","https://openalex.org/W2071810654","https://openalex.org/W2075574309","https://openalex.org/W2086263330","https://openalex.org/W2115800520","https://openalex.org/W2136065207","https://openalex.org/W2143382895","https://openalex.org/W2143794875","https://openalex.org/W2154851992","https://openalex.org/W2156718197","https://openalex.org/W2157005627","https://openalex.org/W2163922914","https://openalex.org/W2171284800","https://openalex.org/W2335855206","https://openalex.org/W2372756678","https://openalex.org/W2393319904","https://openalex.org/W2501527963","https://openalex.org/W2513408092","https://openalex.org/W2592742128","https://openalex.org/W2607500032","https://openalex.org/W2617704558","https://openalex.org/W2629230771","https://openalex.org/W2743104969","https://openalex.org/W2768092025","https://openalex.org/W2778685442","https://openalex.org/W2803560454","https://openalex.org/W2892341857","https://openalex.org/W2918458905","https://openalex.org/W2962756421","https://openalex.org/W2963918466","https://openalex.org/W2998930655","https://openalex.org/W2999364275","https://openalex.org/W3012588029","https://openalex.org/W3014279943","https://openalex.org/W3016137385","https://openalex.org/W3021247069","https://openalex.org/W3024536180","https://openalex.org/W3028768091","https://openalex.org/W3030327893","https://openalex.org/W3033000020","https://openalex.org/W3033853991","https://openalex.org/W3035403290","https://openalex.org/W3036947167","https://openalex.org/W3037568261","https://openalex.org/W3037945517","https://openalex.org/W3038421050","https://openalex.org/W3044927477","https://openalex.org/W3046218096","https://openalex.org/W3071810363","https://openalex.org/W3081039875","https://openalex.org/W3082891494","https://openalex.org/W3085002149","https://openalex.org/W3093667855","https://openalex.org/W3099837227","https://openalex.org/W3102094077","https://openalex.org/W3102820613","https://openalex.org/W3104097132","https://openalex.org/W3115325719","https://openalex.org/W3119952098","https://openalex.org/W3124804477","https://openalex.org/W3125890999","https://openalex.org/W3127086553","https://openalex.org/W3127559895","https://openalex.org/W3139456311","https://openalex.org/W3145471414","https://openalex.org/W3154640918","https://openalex.org/W3165511231","https://openalex.org/W3176790904","https://openalex.org/W3182596647","https://openalex.org/W3186872001","https://openalex.org/W3193511962","https://openalex.org/W3199618438","https://openalex.org/W3215209054","https://openalex.org/W4200253063","https://openalex.org/W4200342870","https://openalex.org/W4206245015","https://openalex.org/W4226283135","https://openalex.org/W4230693010","https://openalex.org/W4254853397","https://openalex.org/W6681432842","https://openalex.org/W6682755970","https://openalex.org/W6703305946","https://openalex.org/W6775538163","https://openalex.org/W6798885770"],"related_works":["https://openalex.org/W2899096130","https://openalex.org/W3190782215","https://openalex.org/W2902729297","https://openalex.org/W3110500039","https://openalex.org/W4255531208","https://openalex.org/W4320009247","https://openalex.org/W4206422705","https://openalex.org/W3186872001","https://openalex.org/W3174741986","https://openalex.org/W4389861022"],"abstract_inverted_index":{"BACKGROUND:":[0],"Coronavirus":[1],"disease":[2],"2019":[3],"(COVID-19)":[4],"has":[5],"spurred":[6],"a":[7,17,99],"boom":[8],"in":[9],"uncovering":[10],"repurposable":[11],"existing":[12],"drugs.":[13],"Drug":[14],"repurposing":[15,43,107],"is":[16],"strategy":[18,70],"for":[19,23,44,77,109],"identifying":[20],"new":[21],"uses":[22],"approved":[24],"or":[25],"investigational":[26],"drugs":[27],"that":[28,196],"are":[29,52,269],"outside":[30],"the":[31,34,72,90,115,123,128,133,141,147,167,176,183,190,217,229,255,260],"scope":[32],"of":[33,41,62,81,175,194],"original":[35],"medical":[36],"indication.":[37],"MOTIVATION:":[38],"Current":[39],"works":[40],"drug":[42,64],"severe":[45],"acute":[46],"respiratory":[47],"syndrome":[48],"coronavirus":[49],"2":[50],"(SARS-CoV-2)":[51],"mostly":[53],"limited":[54],"to":[55,104,121,145,188,223,258],"only":[56],"focusing":[57,92],"on":[58,93,154],"chemical":[59,160],"medicines,":[60,157],"analysis":[61],"single":[63,66],"targeting":[65,243],"SARS-CoV-2":[67,111,164,202,245],"protein,":[68,112],"one-size-fits-all":[69],"using":[71],"same":[73],"treatment":[74,257],"(same":[75],"drug)":[76],"different":[78],"infected":[79,135,213,262],"stages":[80],"SARS-CoV-2.":[82],"To":[83,205],"dilute":[84],"these":[85],"issues,":[86],"we":[87,215],"initially":[88,139],"set":[89],"research":[91],"herbal":[94,156],"medicines.":[95],"We":[96,138,180],"then":[97,181],"proposed":[98,182],"heterogeneous":[100,169],"graph":[101,117,152,185,219],"embedding":[102,178,186],"method":[103,144,187,222],"signaled":[105],"candidate":[106,130,191,225],"herbs":[108,195],"each":[110,239],"and":[113,149,162,200,248,266],"employed":[114,140,216],"variational":[116,218],"convolutional":[118,220],"network":[119,170,221],"approach":[120],"recommend":[122],"precision":[124,207],"herb":[125,226,250],"combinations":[126,227,251],"as":[127,228,254],"potential":[129],"treatments":[131,210],"against":[132],"specific":[134],"stage.":[136],"METHOD:":[137],"virtual":[142],"screening":[143],"construct":[146],"'Herb-Compound'":[148],"'Compound-Protein'":[150],"docking":[151],"based":[153],"480":[155],"12,735":[158],"associated":[159],"compounds":[161],"24":[163,236,244],"proteins.":[165],"Sequentially,":[166],"'Herb-Compound-Protein'":[168],"was":[171],"constructed":[172],"by":[173],"means":[174],"metapath-based":[177],"approach.":[179],"heterogeneous-information-network-based":[184],"generate":[189,224],"ranking":[192,237],"lists":[193],"target":[197,259],"structural,":[198],"nonstructural":[199],"accessory":[201],"proteins,":[203],"individually.":[204],"obtain":[206],"synthetic":[208],"effective":[209],"forvarious":[211],"COVID-19":[212],"stages,":[214],"recommended":[230],"therapeutic":[231],"therapies.":[232],"RESULTS:":[233],"There":[234],"were":[235,252],"lists,":[238],"containing":[240],"top-10":[241],"herbs,":[242],"proteins":[246],"correspondingly,":[247],"20":[249],"generated":[253],"candidate-specific":[256],"four":[261],"stages.":[263],"The":[264],"code":[265],"supplementary":[267],"materials":[268],"freely":[270],"available":[271],"at":[272],"https://github.com/fanyang-AI/TCM-COVID19.":[273]},"counts_by_year":[{"year":2025,"cited_by_count":5},{"year":2024,"cited_by_count":2},{"year":2023,"cited_by_count":1}],"updated_date":"2026-05-21T06:26:12.895304","created_date":"2025-10-10T00:00:00"}
