{"id":"https://openalex.org/W4213076590","doi":"https://doi.org/10.1093/bib/bbac072","title":"HyMM: hybrid method for disease-gene prediction by integrating multiscale module structure","display_name":"HyMM: hybrid method for disease-gene prediction by integrating multiscale module structure","publication_year":2022,"publication_date":"2022-02-15","ids":{"openalex":"https://openalex.org/W4213076590","doi":"https://doi.org/10.1093/bib/bbac072","pmid":"https://pubmed.ncbi.nlm.nih.gov/35275996"},"language":"en","primary_location":{"id":"doi:10.1093/bib/bbac072","is_oa":false,"landing_page_url":"https://doi.org/10.1093/bib/bbac072","pdf_url":null,"source":{"id":"https://openalex.org/S91767247","display_name":"Briefings in Bioinformatics","issn_l":"1467-5463","issn":["1467-5463","1477-4054"],"is_oa":false,"is_in_doaj":true,"is_core":true,"host_organization":"https://openalex.org/P4310311648","host_organization_name":"Oxford University Press","host_organization_lineage":["https://openalex.org/P4310311648","https://openalex.org/P4310311647"],"host_organization_lineage_names":["Oxford University Press","University of Oxford"],"type":"journal"},"license":null,"license_id":null,"version":"publishedVersion","is_accepted":true,"is_published":true,"raw_source_name":"Briefings in Bioinformatics","raw_type":"journal-article"},"type":"article","indexed_in":["crossref","doaj","pubmed"],"open_access":{"is_oa":false,"oa_status":"closed","oa_url":null,"any_repository_has_fulltext":false},"authorships":[{"author_position":"first","author":{"id":"https://openalex.org/A5046328933","display_name":"Ju Xiang","orcid":"https://orcid.org/0000-0002-3045-5706"},"institutions":[{"id":"https://openalex.org/I139660479","display_name":"Central South University","ror":"https://ror.org/00f1zfq44","country_code":"CN","type":"education","lineage":["https://openalex.org/I139660479"]},{"id":"https://openalex.org/I165911609","display_name":"Changsha Medical University","ror":"https://ror.org/05dt7z971","country_code":"CN","type":"education","lineage":["https://openalex.org/I165911609"]}],"countries":["CN"],"is_corresponding":false,"raw_author_name":"Ju Xiang","raw_affiliation_strings":["Hunan Provincial Key Lab on Bioinformatics, School of Computer Science and Engineering, Central South University, Changsha 410083, China; Department of Basic Medical Sciences & Academician Workstation, Changsha Medical University, Changsha, Hunan 410219, China","Department of Basic Medical Sciences & Academician Workstation, Changsha Medical University, Changsha, Hunan 410219, China"],"affiliations":[{"raw_affiliation_string":"Hunan Provincial Key Lab on Bioinformatics, School of Computer Science and Engineering, Central South University, Changsha 410083, China; Department of Basic Medical Sciences & Academician Workstation, Changsha Medical University, Changsha, Hunan 410219, China","institution_ids":["https://openalex.org/I165911609","https://openalex.org/I139660479"]},{"raw_affiliation_string":"Department of Basic Medical Sciences & Academician Workstation, Changsha Medical University, Changsha, Hunan 410219, China","institution_ids":["https://openalex.org/I165911609"]}]},{"author_position":"middle","author":{"id":"https://openalex.org/A5077069371","display_name":"Xiangmao Meng","orcid":"https://orcid.org/0000-0002-7966-551X"},"institutions":[{"id":"https://openalex.org/I139660479","display_name":"Central South University","ror":"https://ror.org/00f1zfq44","country_code":"CN","type":"education","lineage":["https://openalex.org/I139660479"]}],"countries":["CN"],"is_corresponding":false,"raw_author_name":"Xiangmao Meng","raw_affiliation_strings":["School of Computer Science and Engineering, Central South University, Changsha 410083, China"],"affiliations":[{"raw_affiliation_string":"School of Computer Science and Engineering, Central South University, Changsha 410083, China","institution_ids":["https://openalex.org/I139660479"]}]},{"author_position":"middle","author":{"id":"https://openalex.org/A5074611035","display_name":"Yichao Zhao","orcid":"https://orcid.org/0000-0001-8784-5361"},"institutions":[{"id":"https://openalex.org/I139660479","display_name":"Central South University","ror":"https://ror.org/00f1zfq44","country_code":"CN","type":"education","lineage":["https://openalex.org/I139660479"]}],"countries":["CN"],"is_corresponding":false,"raw_author_name":"Yichao Zhao","raw_affiliation_strings":["School of Computer Science and Engineering, Central South University, Changsha, Hunan 410083, China"],"affiliations":[{"raw_affiliation_string":"School of Computer Science and Engineering, Central South University, Changsha, Hunan 410083, China","institution_ids":["https://openalex.org/I139660479"]}]},{"author_position":"middle","author":{"id":"https://openalex.org/A5091157395","display_name":"Fang\u2010Xiang Wu","orcid":"https://orcid.org/0000-0002-4593-9332"},"institutions":[{"id":"https://openalex.org/I32625721","display_name":"University of Saskatchewan","ror":"https://ror.org/010x8gc63","country_code":"CA","type":"education","lineage":["https://openalex.org/I32625721"]}],"countries":["CA"],"is_corresponding":false,"raw_author_name":"Fang-Xiang Wu","raw_affiliation_strings":["Division of Biomedical Engineering and Department of Mechanical Engineering, University of Saskatchewan, Saskatoon, SK, S7N 5A9, Canada"],"affiliations":[{"raw_affiliation_string":"Division of Biomedical Engineering and Department of Mechanical Engineering, University of Saskatchewan, Saskatoon, SK, S7N 5A9, Canada","institution_ids":["https://openalex.org/I32625721"]}]},{"author_position":"last","author":{"id":"https://openalex.org/A5100719013","display_name":"Min Li","orcid":"https://orcid.org/0000-0002-0188-1394"},"institutions":[{"id":"https://openalex.org/I139660479","display_name":"Central South University","ror":"https://ror.org/00f1zfq44","country_code":"CN","type":"education","lineage":["https://openalex.org/I139660479"]}],"countries":["CN"],"is_corresponding":true,"raw_author_name":"Min Li","raw_affiliation_strings":["Hunan Provincial Key Lab on Bioinformatics, School of Computer Science and Engineering, Central South University, Changsha 410083, China"],"affiliations":[{"raw_affiliation_string":"Hunan Provincial Key Lab on Bioinformatics, School of Computer Science and Engineering, Central South University, Changsha 410083, China","institution_ids":["https://openalex.org/I139660479"]}]}],"institutions":[],"countries_distinct_count":2,"institutions_distinct_count":5,"corresponding_author_ids":["https://openalex.org/A5100719013"],"corresponding_institution_ids":["https://openalex.org/I139660479"],"apc_list":{"value":4011,"currency":"USD","value_usd":4011},"apc_paid":null,"fwci":1.3724,"has_fulltext":false,"cited_by_count":21,"citation_normalized_percentile":{"value":0.79939879,"is_in_top_1_percent":false,"is_in_top_10_percent":false},"cited_by_percentile_year":{"min":94,"max":100},"biblio":{"volume":"23","issue":"3","first_page":null,"last_page":null},"is_retracted":false,"is_paratext":false,"is_xpac":false,"primary_topic":{"id":"https://openalex.org/T10887","display_name":"Bioinformatics and Genomic Networks","score":1.0,"subfield":{"id":"https://openalex.org/subfields/1312","display_name":"Molecular Biology"},"field":{"id":"https://openalex.org/fields/13","display_name":"Biochemistry, Genetics and Molecular Biology"},"domain":{"id":"https://openalex.org/domains/1","display_name":"Life Sciences"}},"topics":[{"id":"https://openalex.org/T10887","display_name":"Bioinformatics and Genomic Networks","score":1.0,"subfield":{"id":"https://openalex.org/subfields/1312","display_name":"Molecular Biology"},"field":{"id":"https://openalex.org/fields/13","display_name":"Biochemistry, Genetics and Molecular Biology"},"domain":{"id":"https://openalex.org/domains/1","display_name":"Life Sciences"}},{"id":"https://openalex.org/T10885","display_name":"Gene expression and cancer classification","score":0.9986000061035156,"subfield":{"id":"https://openalex.org/subfields/1312","display_name":"Molecular Biology"},"field":{"id":"https://openalex.org/fields/13","display_name":"Biochemistry, Genetics and Molecular Biology"},"domain":{"id":"https://openalex.org/domains/1","display_name":"Life Sciences"}},{"id":"https://openalex.org/T12254","display_name":"Machine Learning in Bioinformatics","score":0.9973999857902527,"subfield":{"id":"https://openalex.org/subfields/1312","display_name":"Molecular Biology"},"field":{"id":"https://openalex.org/fields/13","display_name":"Biochemistry, Genetics and Molecular Biology"},"domain":{"id":"https://openalex.org/domains/1","display_name":"Life Sciences"}}],"keywords":[{"id":"https://openalex.org/keywords/computer-science","display_name":"Computer science","score":0.6947044730186462},{"id":"https://openalex.org/keywords/modularity","display_name":"Modularity (biology)","score":0.6330232620239258},{"id":"https://openalex.org/keywords/probabilistic-logic","display_name":"Probabilistic logic","score":0.5333229303359985},{"id":"https://openalex.org/keywords/data-mining","display_name":"Data mining","score":0.4776119887828827},{"id":"https://openalex.org/keywords/machine-learning","display_name":"Machine learning","score":0.44374871253967285},{"id":"https://openalex.org/keywords/systems-biology","display_name":"Systems biology","score":0.4435444176197052},{"id":"https://openalex.org/keywords/gene-regulatory-network","display_name":"Gene regulatory network","score":0.43994802236557007},{"id":"https://openalex.org/keywords/artificial-intelligence","display_name":"Artificial intelligence","score":0.3873172998428345},{"id":"https://openalex.org/keywords/computational-biology","display_name":"Computational biology","score":0.3028947114944458},{"id":"https://openalex.org/keywords/gene","display_name":"Gene","score":0.24615147709846497},{"id":"https://openalex.org/keywords/biology","display_name":"Biology","score":0.14497333765029907},{"id":"https://openalex.org/keywords/genetics","display_name":"Genetics","score":0.09928980469703674}],"concepts":[{"id":"https://openalex.org/C41008148","wikidata":"https://www.wikidata.org/wiki/Q21198","display_name":"Computer science","level":0,"score":0.6947044730186462},{"id":"https://openalex.org/C2779478453","wikidata":"https://www.wikidata.org/wiki/Q6889748","display_name":"Modularity (biology)","level":2,"score":0.6330232620239258},{"id":"https://openalex.org/C49937458","wikidata":"https://www.wikidata.org/wiki/Q2599292","display_name":"Probabilistic logic","level":2,"score":0.5333229303359985},{"id":"https://openalex.org/C124101348","wikidata":"https://www.wikidata.org/wiki/Q172491","display_name":"Data mining","level":1,"score":0.4776119887828827},{"id":"https://openalex.org/C119857082","wikidata":"https://www.wikidata.org/wiki/Q2539","display_name":"Machine learning","level":1,"score":0.44374871253967285},{"id":"https://openalex.org/C152662350","wikidata":"https://www.wikidata.org/wiki/Q815297","display_name":"Systems biology","level":2,"score":0.4435444176197052},{"id":"https://openalex.org/C67339327","wikidata":"https://www.wikidata.org/wiki/Q1502576","display_name":"Gene regulatory network","level":4,"score":0.43994802236557007},{"id":"https://openalex.org/C154945302","wikidata":"https://www.wikidata.org/wiki/Q11660","display_name":"Artificial intelligence","level":1,"score":0.3873172998428345},{"id":"https://openalex.org/C70721500","wikidata":"https://www.wikidata.org/wiki/Q177005","display_name":"Computational biology","level":1,"score":0.3028947114944458},{"id":"https://openalex.org/C104317684","wikidata":"https://www.wikidata.org/wiki/Q7187","display_name":"Gene","level":2,"score":0.24615147709846497},{"id":"https://openalex.org/C86803240","wikidata":"https://www.wikidata.org/wiki/Q420","display_name":"Biology","level":0,"score":0.14497333765029907},{"id":"https://openalex.org/C54355233","wikidata":"https://www.wikidata.org/wiki/Q7162","display_name":"Genetics","level":1,"score":0.09928980469703674},{"id":"https://openalex.org/C150194340","wikidata":"https://www.wikidata.org/wiki/Q26972","display_name":"Gene expression","level":3,"score":0.0}],"mesh":[{"descriptor_ui":"D000465","descriptor_name":"Algorithms","qualifier_ui":null,"qualifier_name":null,"is_major_topic":true},{"descriptor_ui":"D000465","descriptor_name":"Algorithms","qualifier_ui":null,"qualifier_name":null,"is_major_topic":true},{"descriptor_ui":"D000465","descriptor_name":"Algorithms","qualifier_ui":null,"qualifier_name":null,"is_major_topic":true},{"descriptor_ui":"D011506","descriptor_name":"Proteins","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D011506","descriptor_name":"Proteins","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D011506","descriptor_name":"Proteins","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D015233","descriptor_name":"Models, Statistical","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D015233","descriptor_name":"Models, Statistical","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D015233","descriptor_name":"Models, Statistical","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D019295","descriptor_name":"Computational Biology","qualifier_ui":"Q000379","qualifier_name":"methods","is_major_topic":true},{"descriptor_ui":"D019295","descriptor_name":"Computational Biology","qualifier_ui":"Q000379","qualifier_name":"methods","is_major_topic":true},{"descriptor_ui":"D019295","descriptor_name":"Computational Biology","qualifier_ui":"Q000379","qualifier_name":"methods","is_major_topic":true}],"locations_count":2,"locations":[{"id":"doi:10.1093/bib/bbac072","is_oa":false,"landing_page_url":"https://doi.org/10.1093/bib/bbac072","pdf_url":null,"source":{"id":"https://openalex.org/S91767247","display_name":"Briefings in Bioinformatics","issn_l":"1467-5463","issn":["1467-5463","1477-4054"],"is_oa":false,"is_in_doaj":true,"is_core":true,"host_organization":"https://openalex.org/P4310311648","host_organization_name":"Oxford University Press","host_organization_lineage":["https://openalex.org/P4310311648","https://openalex.org/P4310311647"],"host_organization_lineage_names":["Oxford University Press","University of Oxford"],"type":"journal"},"license":null,"license_id":null,"version":"publishedVersion","is_accepted":true,"is_published":true,"raw_source_name":"Briefings in Bioinformatics","raw_type":"journal-article"},{"id":"pmid:35275996","is_oa":false,"landing_page_url":"https://pubmed.ncbi.nlm.nih.gov/35275996","pdf_url":null,"source":{"id":"https://openalex.org/S4306525036","display_name":"PubMed","issn_l":null,"issn":null,"is_oa":false,"is_in_doaj":false,"is_core":false,"host_organization":"https://openalex.org/I1299303238","host_organization_name":"National Institutes of Health","host_organization_lineage":["https://openalex.org/I1299303238"],"host_organization_lineage_names":[],"type":"repository"},"license":null,"license_id":null,"version":"publishedVersion","is_accepted":true,"is_published":true,"raw_source_name":"Briefings in bioinformatics","raw_type":null}],"best_oa_location":null,"sustainable_development_goals":[],"awards":[{"id":"https://openalex.org/G2448280140","display_name":null,"funder_award_id":"61702054","funder_id":"https://openalex.org/F4320321001","funder_display_name":"National Natural Science Foundation of China"},{"id":"https://openalex.org/G6497092343","display_name":null,"funder_award_id":"2019YFA0706202","funder_id":"https://openalex.org/F4320335777","funder_display_name":"National Key Research and Development Program of China"}],"funders":[{"id":"https://openalex.org/F4320321001","display_name":"National Natural Science Foundation of China","ror":"https://ror.org/01h0zpd94"},{"id":"https://openalex.org/F4320335777","display_name":"National Key Research and Development Program of China","ror":null}],"has_content":{"pdf":false,"grobid_xml":false},"content_urls":null,"referenced_works_count":177,"referenced_works":["https://openalex.org/W954754213","https://openalex.org/W1498746154","https://openalex.org/W1709660540","https://openalex.org/W1894267660","https://openalex.org/W1897859562","https://openalex.org/W1928856156","https://openalex.org/W1973247012","https://openalex.org/W1976702945","https://openalex.org/W1982151034","https://openalex.org/W1984994038","https://openalex.org/W1985849948","https://openalex.org/W1992107140","https://openalex.org/W1992935533","https://openalex.org/W1999895438","https://openalex.org/W2005980089","https://openalex.org/W2007448777","https://openalex.org/W2025471227","https://openalex.org/W2036178129","https://openalex.org/W2038274440","https://openalex.org/W2041073071","https://openalex.org/W2050031241","https://openalex.org/W2051427941","https://openalex.org/W2053039860","https://openalex.org/W2056480257","https://openalex.org/W2056782561","https://openalex.org/W2062533676","https://openalex.org/W2074617510","https://openalex.org/W2087154532","https://openalex.org/W2090247362","https://openalex.org/W2094869059","https://openalex.org/W2095293504","https://openalex.org/W2097498614","https://openalex.org/W2100097984","https://openalex.org/W2100463963","https://openalex.org/W2100582962","https://openalex.org/W2101725042","https://openalex.org/W2103478816","https://openalex.org/W2104261859","https://openalex.org/W2107502964","https://openalex.org/W2110256992","https://openalex.org/W2110553827","https://openalex.org/W2110588674","https://openalex.org/W2110620844","https://openalex.org/W2114268578","https://openalex.org/W2117024463","https://openalex.org/W2117412805","https://openalex.org/W2119220491","https://openalex.org/W2119412782","https://openalex.org/W2119943416","https://openalex.org/W2124649657","https://openalex.org/W2126249571","https://openalex.org/W2128366083","https://openalex.org/W2129133658","https://openalex.org/W2130410032","https://openalex.org/W2131161884","https://openalex.org/W2131681506","https://openalex.org/W2132958441","https://openalex.org/W2136176074","https://openalex.org/W2140099276","https://openalex.org/W2140462113","https://openalex.org/W2146511318","https://openalex.org/W2151295809","https://openalex.org/W2153624566","https://openalex.org/W2155588896","https://openalex.org/W2156695919","https://openalex.org/W2162032011","https://openalex.org/W2163480486","https://openalex.org/W2168775836","https://openalex.org/W2169950095","https://openalex.org/W2170461266","https://openalex.org/W2170892256","https://openalex.org/W2274610632","https://openalex.org/W2283435117","https://openalex.org/W2299433408","https://openalex.org/W2307267906","https://openalex.org/W2493614923","https://openalex.org/W2506377511","https://openalex.org/W2525423931","https://openalex.org/W2536862554","https://openalex.org/W2536901227","https://openalex.org/W2537679995","https://openalex.org/W2564710687","https://openalex.org/W2567080747","https://openalex.org/W2577490495","https://openalex.org/W2581098287","https://openalex.org/W2582585762","https://openalex.org/W2599750594","https://openalex.org/W2603228471","https://openalex.org/W2608690367","https://openalex.org/W2624021832","https://openalex.org/W2733047156","https://openalex.org/W2737559704","https://openalex.org/W2737931000","https://openalex.org/W2749561448","https://openalex.org/W2754334814","https://openalex.org/W2757055972","https://openalex.org/W2770548163","https://openalex.org/W2772590222","https://openalex.org/W2885207274","https://openalex.org/W2892196137","https://openalex.org/W2897252949","https://openalex.org/W2898461244","https://openalex.org/W2903672323","https://openalex.org/W2934871562","https://openalex.org/W2939387356","https://openalex.org/W2939616717","https://openalex.org/W2950359634","https://openalex.org/W2950595506","https://openalex.org/W2950742983","https://openalex.org/W2951019346","https://openalex.org/W2951271819","https://openalex.org/W2951276412","https://openalex.org/W2951531839","https://openalex.org/W2955056739","https://openalex.org/W2962476296","https://openalex.org/W2970771711","https://openalex.org/W2972577058","https://openalex.org/W2977325883","https://openalex.org/W2981958531","https://openalex.org/W2987928072","https://openalex.org/W2994879846","https://openalex.org/W3002293416","https://openalex.org/W3003753408","https://openalex.org/W3005747671","https://openalex.org/W3006265958","https://openalex.org/W3012990378","https://openalex.org/W3014595730","https://openalex.org/W3022072135","https://openalex.org/W3028912875","https://openalex.org/W3032724472","https://openalex.org/W3034282805","https://openalex.org/W3036113864","https://openalex.org/W3037771764","https://openalex.org/W3037835453","https://openalex.org/W3038007061","https://openalex.org/W3043532150","https://openalex.org/W3045143113","https://openalex.org/W3045868447","https://openalex.org/W3087559531","https://openalex.org/W3093449011","https://openalex.org/W3094181912","https://openalex.org/W3098716471","https://openalex.org/W3099768174","https://openalex.org/W3100398599","https://openalex.org/W3103443653","https://openalex.org/W3105684253","https://openalex.org/W3108155943","https://openalex.org/W3116524082","https://openalex.org/W3118594101","https://openalex.org/W3119034152","https://openalex.org/W3119857312","https://openalex.org/W3121027314","https://openalex.org/W3125564425","https://openalex.org/W3125657411","https://openalex.org/W3126033509","https://openalex.org/W3141934318","https://openalex.org/W3149361930","https://openalex.org/W3154646048","https://openalex.org/W3165207183","https://openalex.org/W3165550821","https://openalex.org/W3194841521","https://openalex.org/W3195226391","https://openalex.org/W3202166525","https://openalex.org/W3211333882","https://openalex.org/W6637672443","https://openalex.org/W6674068858","https://openalex.org/W6677735700","https://openalex.org/W6685074798","https://openalex.org/W6724458390","https://openalex.org/W6731476941","https://openalex.org/W6741091983","https://openalex.org/W6770414484","https://openalex.org/W6776941233","https://openalex.org/W6783452904","https://openalex.org/W6792673697","https://openalex.org/W6803939570","https://openalex.org/W6887803762"],"related_works":["https://openalex.org/W2989101133","https://openalex.org/W2024722675","https://openalex.org/W2949927938","https://openalex.org/W2029387041","https://openalex.org/W2135896045","https://openalex.org/W2032799661","https://openalex.org/W2884256268","https://openalex.org/W2131025197","https://openalex.org/W2799842390","https://openalex.org/W2154615478"],"abstract_inverted_index":{"The":[0],"results":[1],"confirm":[2],"that":[3],"HyMM":[4],"is":[5],"an":[6],"effective":[7],"framework":[8],"for":[9,27],"integrating":[10],"multiscale":[11,32],"module":[12,33],"structure":[13,34],"to":[14,18],"enhance":[15],"the":[16,28,31],"ability":[17],"predict":[19],"disease-related":[20],"genes,":[21],"which":[22],"may":[23],"provide":[24],"useful":[25],"insights":[26],"study":[29],"of":[30],"and":[35],"its":[36],"application":[37],"in":[38],"such":[39],"issues":[40],"as":[41],"a":[42],"disease-gene":[43],"prediction.":[44]},"counts_by_year":[{"year":2026,"cited_by_count":5},{"year":2025,"cited_by_count":8},{"year":2024,"cited_by_count":3},{"year":2023,"cited_by_count":2},{"year":2022,"cited_by_count":3}],"updated_date":"2026-02-27T16:54:17.756197","created_date":"2025-10-10T00:00:00"}
