{"id":"https://openalex.org/W4200179152","doi":"https://doi.org/10.1093/bib/bbab544","title":"Comprehensive assessment of deep generative architectures for <i>de novo</i> drug design","display_name":"Comprehensive assessment of deep generative architectures for <i>de novo</i> drug design","publication_year":2021,"publication_date":"2021-11-26","ids":{"openalex":"https://openalex.org/W4200179152","doi":"https://doi.org/10.1093/bib/bbab544","pmid":"https://pubmed.ncbi.nlm.nih.gov/34929743"},"language":"en","primary_location":{"id":"doi:10.1093/bib/bbab544","is_oa":false,"landing_page_url":"https://doi.org/10.1093/bib/bbab544","pdf_url":null,"source":{"id":"https://openalex.org/S91767247","display_name":"Briefings in Bioinformatics","issn_l":"1467-5463","issn":["1467-5463","1477-4054"],"is_oa":false,"is_in_doaj":true,"is_core":true,"host_organization":"https://openalex.org/P4310311648","host_organization_name":"Oxford University Press","host_organization_lineage":["https://openalex.org/P4310311648","https://openalex.org/P4310311647"],"host_organization_lineage_names":["Oxford University Press","University of Oxford"],"type":"journal"},"license":null,"license_id":null,"version":"publishedVersion","is_accepted":true,"is_published":true,"raw_source_name":"Briefings in Bioinformatics","raw_type":"journal-article"},"type":"article","indexed_in":["crossref","doaj","pubmed"],"open_access":{"is_oa":false,"oa_status":"closed","oa_url":null,"any_repository_has_fulltext":false},"authorships":[{"author_position":"first","author":{"id":"https://openalex.org/A5101919658","display_name":"Mingyang Wang","orcid":"https://orcid.org/0000-0003-0525-6120"},"institutions":[{"id":"https://openalex.org/I76130692","display_name":"Zhejiang University","ror":"https://ror.org/00a2xv884","country_code":"CN","type":"education","lineage":["https://openalex.org/I76130692"]}],"countries":["CN"],"is_corresponding":false,"raw_author_name":"Mingyang Wang","raw_affiliation_strings":["Innovation Institute for Artificial Intelligence in Medicine of Zhejiang University, College of Pharmaceutical Sciences, Zhejiang University, Hangzhou 310058, Zhejiang, P. R. China"],"raw_orcid":null,"affiliations":[{"raw_affiliation_string":"Innovation Institute for Artificial Intelligence in Medicine of Zhejiang University, College of Pharmaceutical Sciences, Zhejiang University, Hangzhou 310058, Zhejiang, P. R. China","institution_ids":["https://openalex.org/I76130692"]}]},{"author_position":"middle","author":{"id":"https://openalex.org/A5011434518","display_name":"Huiyong Sun","orcid":"https://orcid.org/0000-0002-7107-7481"},"institutions":[{"id":"https://openalex.org/I161716053","display_name":"China Pharmaceutical University","ror":"https://ror.org/01sfm2718","country_code":"CN","type":"education","lineage":["https://openalex.org/I161716053"]}],"countries":["CN"],"is_corresponding":false,"raw_author_name":"Huiyong Sun","raw_affiliation_strings":["Department of Medicinal Chemistry, China Pharmaceutical University, Nanjing 210009, Jiangsu, P. R. China"],"raw_orcid":null,"affiliations":[{"raw_affiliation_string":"Department of Medicinal Chemistry, China Pharmaceutical University, Nanjing 210009, Jiangsu, P. R. China","institution_ids":["https://openalex.org/I161716053"]}]},{"author_position":"middle","author":{"id":"https://openalex.org/A5101848725","display_name":"Jike Wang","orcid":"https://orcid.org/0000-0002-8118-8572"},"institutions":[{"id":"https://openalex.org/I76130692","display_name":"Zhejiang University","ror":"https://ror.org/00a2xv884","country_code":"CN","type":"education","lineage":["https://openalex.org/I76130692"]}],"countries":["CN"],"is_corresponding":false,"raw_author_name":"Jike Wang","raw_affiliation_strings":["Innovation Institute for Artificial Intelligence in Medicine of Zhejiang University, College of Pharmaceutical Sciences, Zhejiang University, Hangzhou 310058, Zhejiang, P. R. China"],"raw_orcid":null,"affiliations":[{"raw_affiliation_string":"Innovation Institute for Artificial Intelligence in Medicine of Zhejiang University, College of Pharmaceutical Sciences, Zhejiang University, Hangzhou 310058, Zhejiang, P. R. China","institution_ids":["https://openalex.org/I76130692"]}]},{"author_position":"middle","author":{"id":"https://openalex.org/A5089675765","display_name":"Jinping Pang","orcid":"https://orcid.org/0000-0003-0907-9336"},"institutions":[{"id":"https://openalex.org/I76130692","display_name":"Zhejiang University","ror":"https://ror.org/00a2xv884","country_code":"CN","type":"education","lineage":["https://openalex.org/I76130692"]}],"countries":["CN"],"is_corresponding":false,"raw_author_name":"Jinping Pang","raw_affiliation_strings":["Innovation Institute for Artificial Intelligence in Medicine of Zhejiang University, College of Pharmaceutical Sciences, Zhejiang University, Hangzhou 310058, Zhejiang, P. R. China"],"raw_orcid":null,"affiliations":[{"raw_affiliation_string":"Innovation Institute for Artificial Intelligence in Medicine of Zhejiang University, College of Pharmaceutical Sciences, Zhejiang University, Hangzhou 310058, Zhejiang, P. R. China","institution_ids":["https://openalex.org/I76130692"]}]},{"author_position":"middle","author":{"id":"https://openalex.org/A5070107205","display_name":"Xin Chai","orcid":"https://orcid.org/0000-0003-2212-7777"},"institutions":[{"id":"https://openalex.org/I76130692","display_name":"Zhejiang University","ror":"https://ror.org/00a2xv884","country_code":"CN","type":"education","lineage":["https://openalex.org/I76130692"]}],"countries":["CN"],"is_corresponding":false,"raw_author_name":"Xin Chai","raw_affiliation_strings":["Innovation Institute for Artificial Intelligence in Medicine of Zhejiang University, College of Pharmaceutical Sciences, Zhejiang University, Hangzhou 310058, Zhejiang, P. R. China"],"raw_orcid":null,"affiliations":[{"raw_affiliation_string":"Innovation Institute for Artificial Intelligence in Medicine of Zhejiang University, College of Pharmaceutical Sciences, Zhejiang University, Hangzhou 310058, Zhejiang, P. R. China","institution_ids":["https://openalex.org/I76130692"]}]},{"author_position":"middle","author":{"id":"https://openalex.org/A5061654403","display_name":"Lei Xu","orcid":"https://orcid.org/0000-0002-4095-6539"},"institutions":[{"id":"https://openalex.org/I4210144214","display_name":"Jiangsu University of Technology","ror":"https://ror.org/04jabhf80","country_code":"CN","type":"education","lineage":["https://openalex.org/I4210144214"]}],"countries":["CN"],"is_corresponding":false,"raw_author_name":"Lei Xu","raw_affiliation_strings":["Institute of Bioinformatics and Medical Engineering, School of Electrical and Information Engineering, Jiangsu University of Technology, Changzhou 213001, Jiangsu, China"],"raw_orcid":null,"affiliations":[{"raw_affiliation_string":"Institute of Bioinformatics and Medical Engineering, School of Electrical and Information Engineering, Jiangsu University of Technology, Changzhou 213001, Jiangsu, China","institution_ids":["https://openalex.org/I4210144214"]}]},{"author_position":"middle","author":{"id":"https://openalex.org/A5100688144","display_name":"Honglin Li","orcid":"https://orcid.org/0000-0003-2270-1900"},"institutions":[{"id":"https://openalex.org/I143593769","display_name":"East China University of Science and Technology","ror":"https://ror.org/01vyrm377","country_code":"CN","type":"education","lineage":["https://openalex.org/I143593769"]}],"countries":["CN"],"is_corresponding":true,"raw_author_name":"Honglin Li","raw_affiliation_strings":["Shanghai Key Laboratory of New Drug Design, School of Pharmacy, East China University of Science & Technology, Shanghai 200237, P. R. China"],"raw_orcid":null,"affiliations":[{"raw_affiliation_string":"Shanghai Key Laboratory of New Drug Design, School of Pharmacy, East China University of Science & Technology, Shanghai 200237, P. R. China","institution_ids":["https://openalex.org/I143593769"]}]},{"author_position":"middle","author":{"id":"https://openalex.org/A5083809384","display_name":"Dongsheng Cao","orcid":"https://orcid.org/0000-0003-3604-3785"},"institutions":[{"id":"https://openalex.org/I139660479","display_name":"Central South University","ror":"https://ror.org/00f1zfq44","country_code":"CN","type":"education","lineage":["https://openalex.org/I139660479"]}],"countries":["CN"],"is_corresponding":true,"raw_author_name":"Dongsheng Cao","raw_affiliation_strings":["Xiangya School of Pharmaceutical Sciences, Central South University, Changsha 410013, Hunan, P. R. China"],"raw_orcid":"https://orcid.org/0000-0003-3604-3785","affiliations":[{"raw_affiliation_string":"Xiangya School of Pharmaceutical Sciences, Central South University, Changsha 410013, Hunan, P. R. China","institution_ids":["https://openalex.org/I139660479"]}]},{"author_position":"last","author":{"id":"https://openalex.org/A5028525523","display_name":"Tingjun Hou","orcid":"https://orcid.org/0000-0001-7227-2580"},"institutions":[{"id":"https://openalex.org/I76130692","display_name":"Zhejiang University","ror":"https://ror.org/00a2xv884","country_code":"CN","type":"education","lineage":["https://openalex.org/I76130692"]}],"countries":["CN"],"is_corresponding":true,"raw_author_name":"Tingjun Hou","raw_affiliation_strings":["Innovation Institute for Artificial Intelligence in Medicine of Zhejiang University, College of Pharmaceutical Sciences, Zhejiang University, Hangzhou 310058, Zhejiang, P. R. China"],"raw_orcid":"https://orcid.org/0000-0001-7227-2580","affiliations":[{"raw_affiliation_string":"Innovation Institute for Artificial Intelligence in Medicine of Zhejiang University, College of Pharmaceutical Sciences, Zhejiang University, Hangzhou 310058, Zhejiang, P. R. China","institution_ids":["https://openalex.org/I76130692"]}]}],"institutions":[],"countries_distinct_count":1,"institutions_distinct_count":5,"corresponding_author_ids":["https://openalex.org/A5028525523","https://openalex.org/A5083809384","https://openalex.org/A5100688144"],"corresponding_institution_ids":["https://openalex.org/I139660479","https://openalex.org/I143593769","https://openalex.org/I76130692"],"apc_list":{"value":4011,"currency":"USD","value_usd":4011},"apc_paid":null,"fwci":1.5824,"has_fulltext":false,"cited_by_count":19,"citation_normalized_percentile":{"value":0.85511604,"is_in_top_1_percent":false,"is_in_top_10_percent":false},"cited_by_percentile_year":{"min":89,"max":99},"biblio":{"volume":"23","issue":"1","first_page":null,"last_page":null},"is_retracted":false,"is_paratext":false,"is_xpac":false,"primary_topic":{"id":"https://openalex.org/T10211","display_name":"Computational Drug Discovery Methods","score":1.0,"subfield":{"id":"https://openalex.org/subfields/1703","display_name":"Computational Theory and Mathematics"},"field":{"id":"https://openalex.org/fields/17","display_name":"Computer Science"},"domain":{"id":"https://openalex.org/domains/3","display_name":"Physical Sciences"}},"topics":[{"id":"https://openalex.org/T10211","display_name":"Computational Drug Discovery Methods","score":1.0,"subfield":{"id":"https://openalex.org/subfields/1703","display_name":"Computational Theory and Mathematics"},"field":{"id":"https://openalex.org/fields/17","display_name":"Computer Science"},"domain":{"id":"https://openalex.org/domains/3","display_name":"Physical Sciences"}},{"id":"https://openalex.org/T11948","display_name":"Machine Learning in Materials Science","score":0.9854999780654907,"subfield":{"id":"https://openalex.org/subfields/2505","display_name":"Materials Chemistry"},"field":{"id":"https://openalex.org/fields/25","display_name":"Materials Science"},"domain":{"id":"https://openalex.org/domains/3","display_name":"Physical Sciences"}},{"id":"https://openalex.org/T10044","display_name":"Protein Structure and Dynamics","score":0.9556000232696533,"subfield":{"id":"https://openalex.org/subfields/1312","display_name":"Molecular Biology"},"field":{"id":"https://openalex.org/fields/13","display_name":"Biochemistry, Genetics and Molecular Biology"},"domain":{"id":"https://openalex.org/domains/1","display_name":"Life Sciences"}}],"keywords":[{"id":"https://openalex.org/keywords/computer-science","display_name":"Computer science","score":0.7743996381759644},{"id":"https://openalex.org/keywords/generative-grammar","display_name":"Generative grammar","score":0.7498067617416382},{"id":"https://openalex.org/keywords/artificial-intelligence","display_name":"Artificial intelligence","score":0.5721529722213745},{"id":"https://openalex.org/keywords/exploit","display_name":"Exploit","score":0.5317954421043396},{"id":"https://openalex.org/keywords/machine-learning","display_name":"Machine learning","score":0.5285840034484863},{"id":"https://openalex.org/keywords/generative-design","display_name":"Generative Design","score":0.5158990621566772},{"id":"https://openalex.org/keywords/generative-model","display_name":"Generative model","score":0.49307987093925476},{"id":"https://openalex.org/keywords/drug-discovery","display_name":"Drug discovery","score":0.4821281433105469},{"id":"https://openalex.org/keywords/deep-learning","display_name":"Deep learning","score":0.43392640352249146},{"id":"https://openalex.org/keywords/bioinformatics","display_name":"Bioinformatics","score":0.1563531756401062},{"id":"https://openalex.org/keywords/engineering","display_name":"Engineering","score":0.08579635620117188},{"id":"https://openalex.org/keywords/biology","display_name":"Biology","score":0.0754346251487732}],"concepts":[{"id":"https://openalex.org/C41008148","wikidata":"https://www.wikidata.org/wiki/Q21198","display_name":"Computer science","level":0,"score":0.7743996381759644},{"id":"https://openalex.org/C39890363","wikidata":"https://www.wikidata.org/wiki/Q36108","display_name":"Generative grammar","level":2,"score":0.7498067617416382},{"id":"https://openalex.org/C154945302","wikidata":"https://www.wikidata.org/wiki/Q11660","display_name":"Artificial intelligence","level":1,"score":0.5721529722213745},{"id":"https://openalex.org/C165696696","wikidata":"https://www.wikidata.org/wiki/Q11287","display_name":"Exploit","level":2,"score":0.5317954421043396},{"id":"https://openalex.org/C119857082","wikidata":"https://www.wikidata.org/wiki/Q2539","display_name":"Machine learning","level":1,"score":0.5285840034484863},{"id":"https://openalex.org/C184408114","wikidata":"https://www.wikidata.org/wiki/Q1502022","display_name":"Generative Design","level":3,"score":0.5158990621566772},{"id":"https://openalex.org/C167966045","wikidata":"https://www.wikidata.org/wiki/Q5532625","display_name":"Generative model","level":3,"score":0.49307987093925476},{"id":"https://openalex.org/C74187038","wikidata":"https://www.wikidata.org/wiki/Q1418791","display_name":"Drug discovery","level":2,"score":0.4821281433105469},{"id":"https://openalex.org/C108583219","wikidata":"https://www.wikidata.org/wiki/Q197536","display_name":"Deep learning","level":2,"score":0.43392640352249146},{"id":"https://openalex.org/C60644358","wikidata":"https://www.wikidata.org/wiki/Q128570","display_name":"Bioinformatics","level":1,"score":0.1563531756401062},{"id":"https://openalex.org/C127413603","wikidata":"https://www.wikidata.org/wiki/Q11023","display_name":"Engineering","level":0,"score":0.08579635620117188},{"id":"https://openalex.org/C86803240","wikidata":"https://www.wikidata.org/wiki/Q420","display_name":"Biology","level":0,"score":0.0754346251487732},{"id":"https://openalex.org/C38652104","wikidata":"https://www.wikidata.org/wiki/Q3510521","display_name":"Computer security","level":1,"score":0.0},{"id":"https://openalex.org/C176217482","wikidata":"https://www.wikidata.org/wiki/Q860554","display_name":"Metric (unit)","level":2,"score":0.0},{"id":"https://openalex.org/C21547014","wikidata":"https://www.wikidata.org/wiki/Q1423657","display_name":"Operations management","level":1,"score":0.0}],"mesh":[{"descriptor_ui":"D000077321","descriptor_name":"Deep Learning","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D000077321","descriptor_name":"Deep Learning","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D000077321","descriptor_name":"Deep Learning","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D000465","descriptor_name":"Algorithms","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D000465","descriptor_name":"Algorithms","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D000465","descriptor_name":"Algorithms","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D015195","descriptor_name":"Drug Design","qualifier_ui":null,"qualifier_name":null,"is_major_topic":true},{"descriptor_ui":"D015195","descriptor_name":"Drug Design","qualifier_ui":null,"qualifier_name":null,"is_major_topic":true},{"descriptor_ui":"D015195","descriptor_name":"Drug Design","qualifier_ui":null,"qualifier_name":null,"is_major_topic":true},{"descriptor_ui":"D055808","descriptor_name":"Drug Discovery","qualifier_ui":"Q000379","qualifier_name":"methods","is_major_topic":false},{"descriptor_ui":"D055808","descriptor_name":"Drug Discovery","qualifier_ui":"Q000379","qualifier_name":"methods","is_major_topic":false},{"descriptor_ui":"D055808","descriptor_name":"Drug Discovery","qualifier_ui":"Q000379","qualifier_name":"methods","is_major_topic":false}],"locations_count":2,"locations":[{"id":"doi:10.1093/bib/bbab544","is_oa":false,"landing_page_url":"https://doi.org/10.1093/bib/bbab544","pdf_url":null,"source":{"id":"https://openalex.org/S91767247","display_name":"Briefings in Bioinformatics","issn_l":"1467-5463","issn":["1467-5463","1477-4054"],"is_oa":false,"is_in_doaj":true,"is_core":true,"host_organization":"https://openalex.org/P4310311648","host_organization_name":"Oxford University Press","host_organization_lineage":["https://openalex.org/P4310311648","https://openalex.org/P4310311647"],"host_organization_lineage_names":["Oxford University Press","University of Oxford"],"type":"journal"},"license":null,"license_id":null,"version":"publishedVersion","is_accepted":true,"is_published":true,"raw_source_name":"Briefings in Bioinformatics","raw_type":"journal-article"},{"id":"pmid:34929743","is_oa":false,"landing_page_url":"https://pubmed.ncbi.nlm.nih.gov/34929743","pdf_url":null,"source":{"id":"https://openalex.org/S4306525036","display_name":"PubMed","issn_l":null,"issn":null,"is_oa":false,"is_in_doaj":false,"is_core":false,"host_organization":"https://openalex.org/I1299303238","host_organization_name":"National Institutes of Health","host_organization_lineage":["https://openalex.org/I1299303238"],"host_organization_lineage_names":[],"type":"repository"},"license":null,"license_id":null,"version":"publishedVersion","is_accepted":true,"is_published":true,"raw_source_name":"Briefings in bioinformatics","raw_type":null}],"best_oa_location":null,"sustainable_development_goals":[],"awards":[{"id":"https://openalex.org/G1171080475","display_name":null,"funder_award_id":"2020C03010","funder_id":"https://openalex.org/F8142712028","funder_display_name":"Key Research and Development Program of Zhejiang Province"},{"id":"https://openalex.org/G2260806423","display_name":"\u57fa\u4e8e\u86cb\u767d\u7ed3\u6784\u7684\u6210\u836f\u6027\u9884\u6d4b\u65b0\u65b9\u6cd5\u7814\u7a76","funder_award_id":"21575128","funder_id":"https://openalex.org/F4320321001","funder_display_name":"National Natural Science Foundation of China"},{"id":"https://openalex.org/G3518838102","display_name":null,"funder_award_id":"2020QNA7003","funder_id":"https://openalex.org/F4320335787","funder_display_name":"Fundamental Research Funds for the Central Universities"},{"id":"https://openalex.org/G5851892296","display_name":"\u57fa\u4e8e\u4eba\u5de5\u667a\u80fd\u6280\u672f\u7684\u836f\u7269\u6bd2\u6027\u9884\u6d4b\u7814\u7a76\u53ca\u6bd2\u6027\u9884\u6d4b\u7cfb\u7edf\u7684\u5f00\u53d1","funder_award_id":"LZ19H300001","funder_id":"https://openalex.org/F4320338464","funder_display_name":"Natural Science Foundation of Zhejiang Province"},{"id":"https://openalex.org/G7991011545","display_name":null,"funder_award_id":"81773632","funder_id":"https://openalex.org/F4320321001","funder_display_name":"National Natural Science Foundation of China"}],"funders":[{"id":"https://openalex.org/F4320321001","display_name":"National Natural Science Foundation of China","ror":"https://ror.org/01h0zpd94"},{"id":"https://openalex.org/F4320335787","display_name":"Fundamental Research Funds for the Central Universities","ror":null},{"id":"https://openalex.org/F4320338464","display_name":"Natural Science Foundation of Zhejiang Province","ror":"https://ror.org/01h0zpd94"},{"id":"https://openalex.org/F8142712028","display_name":"Key Research and Development Program of Zhejiang Province","ror":null}],"has_content":{"grobid_xml":false,"pdf":false},"content_urls":null,"referenced_works_count":92,"referenced_works":["https://openalex.org/W1582109070","https://openalex.org/W1592238003","https://openalex.org/W1757990252","https://openalex.org/W1964421276","https://openalex.org/W1973974137","https://openalex.org/W1986176168","https://openalex.org/W1991286793","https://openalex.org/W1998344725","https://openalex.org/W2009299989","https://openalex.org/W2011230643","https://openalex.org/W2011647105","https://openalex.org/W2023818227","https://openalex.org/W2027482274","https://openalex.org/W2035231834","https://openalex.org/W2043509228","https://openalex.org/W2050458179","https://openalex.org/W2052933929","https://openalex.org/W2060217906","https://openalex.org/W2062849346","https://openalex.org/W2077597215","https://openalex.org/W2078521274","https://openalex.org/W2113671407","https://openalex.org/W2113863960","https://openalex.org/W2117819606","https://openalex.org/W2143419487","https://openalex.org/W2146984355","https://openalex.org/W2155478691","https://openalex.org/W2159887157","https://openalex.org/W2177317049","https://openalex.org/W2180898434","https://openalex.org/W2204695023","https://openalex.org/W2406529603","https://openalex.org/W2529996553","https://openalex.org/W2558999090","https://openalex.org/W2578240541","https://openalex.org/W2610148085","https://openalex.org/W2615705357","https://openalex.org/W2618625858","https://openalex.org/W2736137960","https://openalex.org/W2763220183","https://openalex.org/W2765186640","https://openalex.org/W2765224015","https://openalex.org/W2773987374","https://openalex.org/W2786565076","https://openalex.org/W2786722833","https://openalex.org/W2796306022","https://openalex.org/W2883583109","https://openalex.org/W2887447356","https://openalex.org/W2899070097","https://openalex.org/W2900694120","https://openalex.org/W2904656109","https://openalex.org/W2911495555","https://openalex.org/W2914542247","https://openalex.org/W2914635984","https://openalex.org/W2937307539","https://openalex.org/W2945551948","https://openalex.org/W2947161483","https://openalex.org/W2949986955","https://openalex.org/W2950354128","https://openalex.org/W2962764565","https://openalex.org/W2963676163","https://openalex.org/W2965344674","https://openalex.org/W2971690404","https://openalex.org/W2991736596","https://openalex.org/W2992586577","https://openalex.org/W3011286504","https://openalex.org/W3030068589","https://openalex.org/W3048079539","https://openalex.org/W3094686696","https://openalex.org/W3100751385","https://openalex.org/W3100839802","https://openalex.org/W3104956673","https://openalex.org/W3116865743","https://openalex.org/W3126326305","https://openalex.org/W3127347132","https://openalex.org/W3165171933","https://openalex.org/W3194172256","https://openalex.org/W3195161349","https://openalex.org/W3207373390","https://openalex.org/W3207969687","https://openalex.org/W4230007416","https://openalex.org/W4236603592","https://openalex.org/W4252520800","https://openalex.org/W6713834629","https://openalex.org/W6738599175","https://openalex.org/W6742579382","https://openalex.org/W6748188831","https://openalex.org/W6757025876","https://openalex.org/W6777198122","https://openalex.org/W6785151682","https://openalex.org/W6785926261","https://openalex.org/W6802692787"],"related_works":["https://openalex.org/W4312200629","https://openalex.org/W4223943233","https://openalex.org/W4309045103","https://openalex.org/W4225161397","https://openalex.org/W3014300295","https://openalex.org/W4296626309","https://openalex.org/W4200240318","https://openalex.org/W2294985537","https://openalex.org/W4287179775","https://openalex.org/W3186744718"],"abstract_inverted_index":{"Recently,":[0],"deep":[1],"learning":[2,108],"(DL)-based":[3],"de":[4,199],"novo":[5,200],"drug":[6,201],"design":[7],"represents":[8],"a":[9,32,86],"new":[10],"trend":[11],"in":[12,65,107,180,198],"pharmaceutical":[13],"research,":[14],"and":[15,38,73,79,117,129,142],"numerous":[16],"DL-based":[17,93,130,148,168],"methods":[18,42,106,149,169],"have":[19,95,151],"been":[20],"developed":[21],"for":[22,85,122,191],"the":[23,36,49,59,62,92,99,104,109,114,127,136,139,143,147,159,167,176,192],"generation":[24],"of":[25,35,40,51,61,76,82,113,138,195],"novel":[26,83],"compounds":[27,84],"with":[28],"desired":[29],"properties.":[30],"However,":[31,125],"comprehensive":[33],"understanding":[34],"advantages":[37,97,174],"disadvantages":[39],"these":[41],"is":[43],"still":[44],"lacking.":[45],"In":[46,90],"this":[47],"study,":[48],"performances":[50],"different":[52,66],"generative":[53,131,196],"models":[54,94,101,132,197],"were":[55],"evaluated":[56],"by":[57,103,146,158],"analyzing":[58],"properties":[60],"generated":[63,145,157],"molecules":[64,144],"scenarios,":[67],"such":[68],"as":[69],"goal-directed":[70,181],"(rediscovery,":[71],"optimization":[72],"scaffold":[74,153],"hopping":[75],"active":[77],"compounds)":[78],"target-specific":[80,123],"(generation":[81],"given":[87],"target)":[88],"tasks.":[89,124,182],"overall,":[91],"significant":[96],"over":[98,175],"baseline":[100],"built":[102],"traditional":[105,160],"physicochemical":[110],"property":[111],"distributions":[112],"training":[115,140],"sets":[116],"may":[118],"be":[119],"more":[120],"suitable":[121],"both":[126],"baselines":[128,179],"cannot":[133],"fully":[134],"exploit":[135],"scaffolds":[137],"sets,":[141],"even":[150],"lower":[152],"diversity":[154],"than":[155],"those":[156],"models.":[161],"Moreover,":[162],"our":[163,186],"assessment":[164],"illustrates":[165],"that":[166,185],"do":[170],"not":[171],"exhibit":[172],"obvious":[173],"genetic":[177],"algorithm-based":[178],"We":[183],"believe":[184],"study":[187],"provides":[188],"valuable":[189],"guidance":[190],"effective":[193],"use":[194],"design.":[202]},"counts_by_year":[{"year":2026,"cited_by_count":4},{"year":2025,"cited_by_count":3},{"year":2024,"cited_by_count":5},{"year":2023,"cited_by_count":1},{"year":2022,"cited_by_count":6}],"updated_date":"2026-07-16T13:24:37.021932","created_date":"2021-12-31T00:00:00"}
