{"id":"https://openalex.org/W4200432021","doi":"https://doi.org/10.1093/bib/bbab516","title":"Heavy chain sequence-based classifier for the specificity of human antibodies","display_name":"Heavy chain sequence-based classifier for the specificity of human antibodies","publication_year":2021,"publication_date":"2021-11-12","ids":{"openalex":"https://openalex.org/W4200432021","doi":"https://doi.org/10.1093/bib/bbab516","pmid":"https://pubmed.ncbi.nlm.nih.gov/34953464"},"language":"en","primary_location":{"id":"doi:10.1093/bib/bbab516","is_oa":false,"landing_page_url":"https://doi.org/10.1093/bib/bbab516","pdf_url":null,"source":{"id":"https://openalex.org/S91767247","display_name":"Briefings in Bioinformatics","issn_l":"1467-5463","issn":["1467-5463","1477-4054"],"is_oa":false,"is_in_doaj":true,"is_core":true,"host_organization":"https://openalex.org/P4310311648","host_organization_name":"Oxford University Press","host_organization_lineage":["https://openalex.org/P4310311648","https://openalex.org/P4310311647"],"host_organization_lineage_names":["Oxford University Press","University of Oxford"],"type":"journal"},"license":null,"license_id":null,"version":"publishedVersion","is_accepted":true,"is_published":true,"raw_source_name":"Briefings in Bioinformatics","raw_type":"journal-article"},"type":"article","indexed_in":["crossref","doaj","pubmed"],"open_access":{"is_oa":false,"oa_status":"closed","oa_url":null,"any_repository_has_fulltext":false},"authorships":[{"author_position":"first","author":{"id":"https://openalex.org/A5100352467","display_name":"Yaqi Wang","orcid":"https://orcid.org/0000-0002-4627-3392"},"institutions":[{"id":"https://openalex.org/I157773358","display_name":"Sun Yat-sen University","ror":"https://ror.org/0064kty71","country_code":"CN","type":"education","lineage":["https://openalex.org/I157773358"]}],"countries":["CN"],"is_corresponding":false,"raw_author_name":"Yaqi Wang","raw_affiliation_strings":["School of Public Health (Shenzhen), Shenzhen Campus of Sun Yat-sen University, Shenzhen 518107, P.R. China","School of Public Health (Shenzhen), Sun Yat-sen University, Guangzhou 510275, P.R. China"],"raw_orcid":null,"affiliations":[{"raw_affiliation_string":"School of Public Health (Shenzhen), Shenzhen Campus of Sun Yat-sen University, Shenzhen 518107, P.R. China","institution_ids":["https://openalex.org/I157773358"]},{"raw_affiliation_string":"School of Public Health (Shenzhen), Sun Yat-sen University, Guangzhou 510275, P.R. China","institution_ids":["https://openalex.org/I157773358"]}]},{"author_position":"middle","author":{"id":"https://openalex.org/A5068708518","display_name":"Guoqin Mai","orcid":"https://orcid.org/0000-0003-1463-7152"},"institutions":[{"id":"https://openalex.org/I157773358","display_name":"Sun Yat-sen University","ror":"https://ror.org/0064kty71","country_code":"CN","type":"education","lineage":["https://openalex.org/I157773358"]}],"countries":["CN"],"is_corresponding":false,"raw_author_name":"Guoqin Mai","raw_affiliation_strings":["School of Public Health (Shenzhen), Shenzhen Campus of Sun Yat-sen University, Shenzhen 518107, P.R. China","School of Public Health (Shenzhen), Sun Yat-sen University, Guangzhou 510275, P.R. China"],"raw_orcid":null,"affiliations":[{"raw_affiliation_string":"School of Public Health (Shenzhen), Shenzhen Campus of Sun Yat-sen University, Shenzhen 518107, P.R. China","institution_ids":["https://openalex.org/I157773358"]},{"raw_affiliation_string":"School of Public Health (Shenzhen), Sun Yat-sen University, Guangzhou 510275, P.R. China","institution_ids":["https://openalex.org/I157773358"]}]},{"author_position":"middle","author":{"id":"https://openalex.org/A5083031257","display_name":"Min Zou","orcid":"https://orcid.org/0000-0003-0726-1003"},"institutions":[{"id":"https://openalex.org/I157773358","display_name":"Sun Yat-sen University","ror":"https://ror.org/0064kty71","country_code":"CN","type":"education","lineage":["https://openalex.org/I157773358"]}],"countries":["CN"],"is_corresponding":false,"raw_author_name":"Min Zou","raw_affiliation_strings":["School of Public Health (Shenzhen), Shenzhen Campus of Sun Yat-sen University, Shenzhen 518107, P.R. China","School of Public Health (Shenzhen), Sun Yat-sen University, Guangzhou 510275, P.R. China"],"raw_orcid":null,"affiliations":[{"raw_affiliation_string":"School of Public Health (Shenzhen), Shenzhen Campus of Sun Yat-sen University, Shenzhen 518107, P.R. China","institution_ids":["https://openalex.org/I157773358"]},{"raw_affiliation_string":"School of Public Health (Shenzhen), Sun Yat-sen University, Guangzhou 510275, P.R. China","institution_ids":["https://openalex.org/I157773358"]}]},{"author_position":"middle","author":{"id":"https://openalex.org/A5111207166","display_name":"Haoyu Long","orcid":null},"institutions":[{"id":"https://openalex.org/I157773358","display_name":"Sun Yat-sen University","ror":"https://ror.org/0064kty71","country_code":"CN","type":"education","lineage":["https://openalex.org/I157773358"]}],"countries":["CN"],"is_corresponding":false,"raw_author_name":"Haoyu Long","raw_affiliation_strings":["School of Public Health (Shenzhen), Shenzhen Campus of Sun Yat-sen University, Shenzhen 518107, P.R. China","School of Public Health (Shenzhen), Sun Yat-sen University, Guangzhou 510275, P.R. China"],"raw_orcid":null,"affiliations":[{"raw_affiliation_string":"School of Public Health (Shenzhen), Shenzhen Campus of Sun Yat-sen University, Shenzhen 518107, P.R. China","institution_ids":["https://openalex.org/I157773358"]},{"raw_affiliation_string":"School of Public Health (Shenzhen), Sun Yat-sen University, Guangzhou 510275, P.R. China","institution_ids":["https://openalex.org/I157773358"]}]},{"author_position":"middle","author":{"id":"https://openalex.org/A5039345848","display_name":"Yao-Qing Chen","orcid":"https://orcid.org/0000-0002-4659-1550"},"institutions":[{"id":"https://openalex.org/I157773358","display_name":"Sun Yat-sen University","ror":"https://ror.org/0064kty71","country_code":"CN","type":"education","lineage":["https://openalex.org/I157773358"]}],"countries":["CN"],"is_corresponding":false,"raw_author_name":"Yao-Qing Chen","raw_affiliation_strings":["School of Public Health (Shenzhen), Shenzhen Campus of Sun Yat-sen University, Shenzhen 518107, P.R. China","School of Public Health (Shenzhen), Sun Yat-sen University, Guangzhou 510275, P.R. China"],"raw_orcid":null,"affiliations":[{"raw_affiliation_string":"School of Public Health (Shenzhen), Shenzhen Campus of Sun Yat-sen University, Shenzhen 518107, P.R. China","institution_ids":["https://openalex.org/I157773358"]},{"raw_affiliation_string":"School of Public Health (Shenzhen), Sun Yat-sen University, Guangzhou 510275, P.R. China","institution_ids":["https://openalex.org/I157773358"]}]},{"author_position":"middle","author":{"id":"https://openalex.org/A5035678484","display_name":"Litao Sun","orcid":"https://orcid.org/0000-0002-8415-989X"},"institutions":[{"id":"https://openalex.org/I157773358","display_name":"Sun Yat-sen University","ror":"https://ror.org/0064kty71","country_code":"CN","type":"education","lineage":["https://openalex.org/I157773358"]}],"countries":["CN"],"is_corresponding":false,"raw_author_name":"Litao Sun","raw_affiliation_strings":["School of Public Health (Shenzhen), Shenzhen Campus of Sun Yat-sen University, Shenzhen 518107, P.R. China","School of Public Health (Shenzhen), Sun Yat-sen University, Guangzhou 510275, P.R. China"],"raw_orcid":"https://orcid.org/0000-0002-8415-989X","affiliations":[{"raw_affiliation_string":"School of Public Health (Shenzhen), Shenzhen Campus of Sun Yat-sen University, Shenzhen 518107, P.R. China","institution_ids":["https://openalex.org/I157773358"]},{"raw_affiliation_string":"School of Public Health (Shenzhen), Sun Yat-sen University, Guangzhou 510275, P.R. China","institution_ids":["https://openalex.org/I157773358"]}]},{"author_position":"middle","author":{"id":"https://openalex.org/A5015927927","display_name":"Dechao Tian","orcid":"https://orcid.org/0000-0001-9281-1633"},"institutions":[{"id":"https://openalex.org/I157773358","display_name":"Sun Yat-sen University","ror":"https://ror.org/0064kty71","country_code":"CN","type":"education","lineage":["https://openalex.org/I157773358"]}],"countries":["CN"],"is_corresponding":false,"raw_author_name":"Dechao Tian","raw_affiliation_strings":["School of Public Health (Shenzhen), Shenzhen Campus of Sun Yat-sen University, Shenzhen 518107, P.R. China","School of Public Health (Shenzhen), Sun Yat-sen University, Guangzhou 510275, P.R. China"],"raw_orcid":null,"affiliations":[{"raw_affiliation_string":"School of Public Health (Shenzhen), Shenzhen Campus of Sun Yat-sen University, Shenzhen 518107, P.R. China","institution_ids":["https://openalex.org/I157773358"]},{"raw_affiliation_string":"School of Public Health (Shenzhen), Sun Yat-sen University, Guangzhou 510275, P.R. China","institution_ids":["https://openalex.org/I157773358"]}]},{"author_position":"middle","author":{"id":"https://openalex.org/A5115565883","display_name":"Yang Zhao","orcid":"https://orcid.org/0000-0003-1571-5394"},"institutions":[{"id":"https://openalex.org/I157773358","display_name":"Sun Yat-sen University","ror":"https://ror.org/0064kty71","country_code":"CN","type":"education","lineage":["https://openalex.org/I157773358"]}],"countries":["CN"],"is_corresponding":false,"raw_author_name":"Yang Zhao","raw_affiliation_strings":["School of Public Health (Shenzhen), Shenzhen Campus of Sun Yat-sen University, Shenzhen 518107, P.R. China","School of Public Health (Shenzhen), Sun Yat-sen University, Guangzhou 510275, P.R. China"],"raw_orcid":null,"affiliations":[{"raw_affiliation_string":"School of Public Health (Shenzhen), Shenzhen Campus of Sun Yat-sen University, Shenzhen 518107, P.R. China","institution_ids":["https://openalex.org/I157773358"]},{"raw_affiliation_string":"School of Public Health (Shenzhen), Sun Yat-sen University, Guangzhou 510275, P.R. China","institution_ids":["https://openalex.org/I157773358"]}]},{"author_position":"middle","author":{"id":"https://openalex.org/A5073188505","display_name":"Guozhi Jiang","orcid":"https://orcid.org/0000-0002-2795-714X"},"institutions":[{"id":"https://openalex.org/I157773358","display_name":"Sun Yat-sen University","ror":"https://ror.org/0064kty71","country_code":"CN","type":"education","lineage":["https://openalex.org/I157773358"]}],"countries":["CN"],"is_corresponding":false,"raw_author_name":"Guozhi Jiang","raw_affiliation_strings":["School of Public Health (Shenzhen), Shenzhen Campus of Sun Yat-sen University, Shenzhen 518107, P.R. China","School of Public Health (Shenzhen), Sun Yat-sen University, Guangzhou 510275, P.R. China"],"raw_orcid":null,"affiliations":[{"raw_affiliation_string":"School of Public Health (Shenzhen), Shenzhen Campus of Sun Yat-sen University, Shenzhen 518107, P.R. China","institution_ids":["https://openalex.org/I157773358"]},{"raw_affiliation_string":"School of Public Health (Shenzhen), Sun Yat-sen University, Guangzhou 510275, P.R. China","institution_ids":["https://openalex.org/I157773358"]}]},{"author_position":"middle","author":{"id":"https://openalex.org/A5009775329","display_name":"Zicheng Cao","orcid":"https://orcid.org/0000-0001-6215-6850"},"institutions":[{"id":"https://openalex.org/I157773358","display_name":"Sun Yat-sen University","ror":"https://ror.org/0064kty71","country_code":"CN","type":"education","lineage":["https://openalex.org/I157773358"]}],"countries":["CN"],"is_corresponding":true,"raw_author_name":"Zicheng Cao","raw_affiliation_strings":["School of Public Health (Shenzhen), Shenzhen Campus of Sun Yat-sen University, Shenzhen 518107, P.R. China","School of Public Health (Shenzhen), Sun Yat-sen University, Guangzhou 510275, P.R. China"],"raw_orcid":null,"affiliations":[{"raw_affiliation_string":"School of Public Health (Shenzhen), Shenzhen Campus of Sun Yat-sen University, Shenzhen 518107, P.R. China","institution_ids":["https://openalex.org/I157773358"]},{"raw_affiliation_string":"School of Public Health (Shenzhen), Sun Yat-sen University, Guangzhou 510275, P.R. China","institution_ids":["https://openalex.org/I157773358"]}]},{"author_position":"last","author":{"id":"https://openalex.org/A5051657705","display_name":"Xiangjun Du","orcid":"https://orcid.org/0000-0001-8184-8430"},"institutions":[{"id":"https://openalex.org/I157773358","display_name":"Sun Yat-sen University","ror":"https://ror.org/0064kty71","country_code":"CN","type":"education","lineage":["https://openalex.org/I157773358"]}],"countries":["CN"],"is_corresponding":true,"raw_author_name":"Xiangjun Du","raw_affiliation_strings":["Key Laboratory of Tropical Disease Control, Ministry of Education, Sun Yat-sen University, Guangzhou, 510030, P.R. China","School of Public Health (Shenzhen), Shenzhen Campus of Sun Yat-sen University, Shenzhen 518107, P.R. China","School of Public Health (Shenzhen), Sun Yat-sen University, Guangzhou 510275, P.R. China"],"raw_orcid":"https://orcid.org/0000-0001-8184-8430","affiliations":[{"raw_affiliation_string":"Key Laboratory of Tropical Disease Control, Ministry of Education, Sun Yat-sen University, Guangzhou, 510030, P.R. China","institution_ids":["https://openalex.org/I157773358"]},{"raw_affiliation_string":"School of Public Health (Shenzhen), Shenzhen Campus of Sun Yat-sen University, Shenzhen 518107, P.R. China","institution_ids":["https://openalex.org/I157773358"]},{"raw_affiliation_string":"School of Public Health (Shenzhen), Sun Yat-sen University, Guangzhou 510275, P.R. China","institution_ids":["https://openalex.org/I157773358"]}]}],"institutions":[],"countries_distinct_count":1,"institutions_distinct_count":11,"corresponding_author_ids":["https://openalex.org/A5009775329","https://openalex.org/A5051657705"],"corresponding_institution_ids":["https://openalex.org/I157773358"],"apc_list":{"value":4011,"currency":"USD","value_usd":4011},"apc_paid":null,"fwci":0.4301,"has_fulltext":false,"cited_by_count":8,"citation_normalized_percentile":{"value":0.64982616,"is_in_top_1_percent":false,"is_in_top_10_percent":false},"cited_by_percentile_year":{"min":90,"max":99},"biblio":{"volume":"23","issue":"1","first_page":null,"last_page":null},"is_retracted":false,"is_paratext":false,"is_xpac":false,"primary_topic":{"id":"https://openalex.org/T11016","display_name":"Monoclonal and Polyclonal Antibodies Research","score":0.9998999834060669,"subfield":{"id":"https://openalex.org/subfields/2741","display_name":"Radiology, Nuclear Medicine and Imaging"},"field":{"id":"https://openalex.org/fields/27","display_name":"Medicine"},"domain":{"id":"https://openalex.org/domains/4","display_name":"Health Sciences"}},"topics":[{"id":"https://openalex.org/T11016","display_name":"Monoclonal and Polyclonal Antibodies Research","score":0.9998999834060669,"subfield":{"id":"https://openalex.org/subfields/2741","display_name":"Radiology, Nuclear Medicine and Imaging"},"field":{"id":"https://openalex.org/fields/27","display_name":"Medicine"},"domain":{"id":"https://openalex.org/domains/4","display_name":"Health Sciences"}},{"id":"https://openalex.org/T10602","display_name":"Glycosylation and Glycoproteins Research","score":0.9991000294685364,"subfield":{"id":"https://openalex.org/subfields/1312","display_name":"Molecular Biology"},"field":{"id":"https://openalex.org/fields/13","display_name":"Biochemistry, Genetics and Molecular Biology"},"domain":{"id":"https://openalex.org/domains/1","display_name":"Life Sciences"}},{"id":"https://openalex.org/T12576","display_name":"vaccines and immunoinformatics approaches","score":0.9987000226974487,"subfield":{"id":"https://openalex.org/subfields/1312","display_name":"Molecular Biology"},"field":{"id":"https://openalex.org/fields/13","display_name":"Biochemistry, Genetics and Molecular Biology"},"domain":{"id":"https://openalex.org/domains/1","display_name":"Life Sciences"}}],"keywords":[{"id":"https://openalex.org/keywords/classifier","display_name":"Classifier (UML)","score":0.6576092839241028},{"id":"https://openalex.org/keywords/antibody","display_name":"Antibody","score":0.6113998889923096},{"id":"https://openalex.org/keywords/computational-biology","display_name":"Computational biology","score":0.5540324449539185},{"id":"https://openalex.org/keywords/computer-science","display_name":"Computer science","score":0.5422902703285217},{"id":"https://openalex.org/keywords/complementarity-determining-region","display_name":"Complementarity determining region","score":0.5176358819007874},{"id":"https://openalex.org/keywords/toxoid","display_name":"Toxoid","score":0.46122652292251587},{"id":"https://openalex.org/keywords/receiver-operating-characteristic","display_name":"Receiver operating characteristic","score":0.4416007995605469},{"id":"https://openalex.org/keywords/artificial-intelligence","display_name":"Artificial intelligence","score":0.41238850355148315},{"id":"https://openalex.org/keywords/biology","display_name":"Biology","score":0.33952176570892334},{"id":"https://openalex.org/keywords/immunology","display_name":"Immunology","score":0.3132999539375305},{"id":"https://openalex.org/keywords/immunoglobulin-light-chain","display_name":"Immunoglobulin light chain","score":0.26974034309387207},{"id":"https://openalex.org/keywords/machine-learning","display_name":"Machine learning","score":0.23929432034492493}],"concepts":[{"id":"https://openalex.org/C95623464","wikidata":"https://www.wikidata.org/wiki/Q1096149","display_name":"Classifier (UML)","level":2,"score":0.6576092839241028},{"id":"https://openalex.org/C159654299","wikidata":"https://www.wikidata.org/wiki/Q79460","display_name":"Antibody","level":2,"score":0.6113998889923096},{"id":"https://openalex.org/C70721500","wikidata":"https://www.wikidata.org/wiki/Q177005","display_name":"Computational biology","level":1,"score":0.5540324449539185},{"id":"https://openalex.org/C41008148","wikidata":"https://www.wikidata.org/wiki/Q21198","display_name":"Computer science","level":0,"score":0.5422902703285217},{"id":"https://openalex.org/C85630698","wikidata":"https://www.wikidata.org/wiki/Q3826179","display_name":"Complementarity determining region","level":4,"score":0.5176358819007874},{"id":"https://openalex.org/C2777351567","wikidata":"https://www.wikidata.org/wiki/Q908822","display_name":"Toxoid","level":4,"score":0.46122652292251587},{"id":"https://openalex.org/C58471807","wikidata":"https://www.wikidata.org/wiki/Q327120","display_name":"Receiver operating characteristic","level":2,"score":0.4416007995605469},{"id":"https://openalex.org/C154945302","wikidata":"https://www.wikidata.org/wiki/Q11660","display_name":"Artificial intelligence","level":1,"score":0.41238850355148315},{"id":"https://openalex.org/C86803240","wikidata":"https://www.wikidata.org/wiki/Q420","display_name":"Biology","level":0,"score":0.33952176570892334},{"id":"https://openalex.org/C203014093","wikidata":"https://www.wikidata.org/wiki/Q101929","display_name":"Immunology","level":1,"score":0.3132999539375305},{"id":"https://openalex.org/C36394416","wikidata":"https://www.wikidata.org/wiki/Q949267","display_name":"Immunoglobulin light chain","level":3,"score":0.26974034309387207},{"id":"https://openalex.org/C119857082","wikidata":"https://www.wikidata.org/wiki/Q2539","display_name":"Machine learning","level":1,"score":0.23929432034492493},{"id":"https://openalex.org/C2780801004","wikidata":"https://www.wikidata.org/wiki/Q1415366","display_name":"Immunization","level":3,"score":0.0}],"mesh":[{"descriptor_ui":"D000069550","descriptor_name":"Machine Learning","qualifier_ui":null,"qualifier_name":null,"is_major_topic":true},{"descriptor_ui":"D000069550","descriptor_name":"Machine Learning","qualifier_ui":null,"qualifier_name":null,"is_major_topic":true},{"descriptor_ui":"D000069550","descriptor_name":"Machine Learning","qualifier_ui":null,"qualifier_name":null,"is_major_topic":true},{"descriptor_ui":"D000595","descriptor_name":"Amino Acid Sequence","qualifier_ui":null,"qualifier_name":null,"is_major_topic":true},{"descriptor_ui":"D000595","descriptor_name":"Amino Acid Sequence","qualifier_ui":null,"qualifier_name":null,"is_major_topic":true},{"descriptor_ui":"D000595","descriptor_name":"Amino Acid Sequence","qualifier_ui":null,"qualifier_name":null,"is_major_topic":true},{"descriptor_ui":"D000906","descriptor_name":"Antibodies","qualifier_ui":"Q000737","qualifier_name":"chemistry","is_major_topic":false},{"descriptor_ui":"D000906","descriptor_name":"Antibodies","qualifier_ui":"Q000737","qualifier_name":"chemistry","is_major_topic":false},{"descriptor_ui":"D000906","descriptor_name":"Antibodies","qualifier_ui":"Q000737","qualifier_name":"chemistry","is_major_topic":false},{"descriptor_ui":"D000918","descriptor_name":"Antibody Specificity","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D000918","descriptor_name":"Antibody Specificity","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D000918","descriptor_name":"Antibody Specificity","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D006801","descriptor_name":"Humans","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D006801","descriptor_name":"Humans","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D006801","descriptor_name":"Humans","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D012372","descriptor_name":"ROC Curve","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D012372","descriptor_name":"ROC Curve","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D012372","descriptor_name":"ROC Curve","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D022801","descriptor_name":"Complementarity Determining Regions","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D022801","descriptor_name":"Complementarity Determining Regions","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D022801","descriptor_name":"Complementarity Determining Regions","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D059014","descriptor_name":"High-Throughput Nucleotide Sequencing","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D059014","descriptor_name":"High-Throughput Nucleotide Sequencing","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D059014","descriptor_name":"High-Throughput Nucleotide Sequencing","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false}],"locations_count":2,"locations":[{"id":"doi:10.1093/bib/bbab516","is_oa":false,"landing_page_url":"https://doi.org/10.1093/bib/bbab516","pdf_url":null,"source":{"id":"https://openalex.org/S91767247","display_name":"Briefings in Bioinformatics","issn_l":"1467-5463","issn":["1467-5463","1477-4054"],"is_oa":false,"is_in_doaj":true,"is_core":true,"host_organization":"https://openalex.org/P4310311648","host_organization_name":"Oxford University Press","host_organization_lineage":["https://openalex.org/P4310311648","https://openalex.org/P4310311647"],"host_organization_lineage_names":["Oxford University Press","University of Oxford"],"type":"journal"},"license":null,"license_id":null,"version":"publishedVersion","is_accepted":true,"is_published":true,"raw_source_name":"Briefings in Bioinformatics","raw_type":"journal-article"},{"id":"pmid:34953464","is_oa":false,"landing_page_url":"https://pubmed.ncbi.nlm.nih.gov/34953464","pdf_url":null,"source":{"id":"https://openalex.org/S4306525036","display_name":"PubMed","issn_l":null,"issn":null,"is_oa":false,"is_in_doaj":false,"is_core":false,"host_organization":"https://openalex.org/I1299303238","host_organization_name":"National Institutes of Health","host_organization_lineage":["https://openalex.org/I1299303238"],"host_organization_lineage_names":[],"type":"repository"},"license":null,"license_id":null,"version":"publishedVersion","is_accepted":true,"is_published":true,"raw_source_name":"Briefings in bioinformatics","raw_type":null}],"best_oa_location":null,"sustainable_development_goals":[{"score":0.8100000023841858,"display_name":"Good health and well-being","id":"https://metadata.un.org/sdg/3"}],"awards":[],"funders":[],"has_content":{"pdf":false,"grobid_xml":false},"content_urls":null,"referenced_works_count":52,"referenced_works":["https://openalex.org/W135571511","https://openalex.org/W1883768105","https://openalex.org/W1963778872","https://openalex.org/W1974596630","https://openalex.org/W2009125186","https://openalex.org/W2030793934","https://openalex.org/W2052984131","https://openalex.org/W2062537390","https://openalex.org/W2074560222","https://openalex.org/W2091477384","https://openalex.org/W2097594050","https://openalex.org/W2110036226","https://openalex.org/W2113392525","https://openalex.org/W2114850508","https://openalex.org/W2125748493","https://openalex.org/W2131271579","https://openalex.org/W2147209844","https://openalex.org/W2157107905","https://openalex.org/W2163449716","https://openalex.org/W2175702062","https://openalex.org/W2188526495","https://openalex.org/W2508744904","https://openalex.org/W2541125372","https://openalex.org/W2612935389","https://openalex.org/W2613686816","https://openalex.org/W2625052417","https://openalex.org/W2755978499","https://openalex.org/W2793773213","https://openalex.org/W2801965704","https://openalex.org/W2805310212","https://openalex.org/W2808835989","https://openalex.org/W2884557428","https://openalex.org/W2884680775","https://openalex.org/W2911917386","https://openalex.org/W2912083425","https://openalex.org/W2912640294","https://openalex.org/W2919734007","https://openalex.org/W2950612260","https://openalex.org/W2958475422","https://openalex.org/W2981941208","https://openalex.org/W2990052415","https://openalex.org/W2999615587","https://openalex.org/W2999958881","https://openalex.org/W3009228924","https://openalex.org/W3047382996","https://openalex.org/W3048782167","https://openalex.org/W3135351475","https://openalex.org/W3153787221","https://openalex.org/W4229892776","https://openalex.org/W4234649573","https://openalex.org/W4240294902","https://openalex.org/W4401946486"],"related_works":["https://openalex.org/W41506990","https://openalex.org/W168309117","https://openalex.org/W2001148980","https://openalex.org/W29877242","https://openalex.org/W2404587144","https://openalex.org/W2474469336","https://openalex.org/W1545596062","https://openalex.org/W1895882813","https://openalex.org/W2397974850","https://openalex.org/W1628283138"],"abstract_inverted_index":{"Antibodies":[0],"specifically":[1],"bind":[2],"to":[3,45,81],"antigens":[4],"and":[5,21,57,73,101,111,135,153,160,169,180,192],"are":[6,16],"an":[7,76],"essential":[8],"part":[9],"of":[10,30,40,86,89,129,147,155,194],"the":[11,31,83,123,132,138,142,145,148,161,167,173,188],"immune":[12,32],"system.":[13],"Hence,":[14],"antibodies":[15,52],"powerful":[17],"tools":[18],"in":[19,37,183],"research":[20],"diagnostics.":[22],"High-throughput":[23],"sequencing":[24],"technologies":[25],"have":[26],"promoted":[27],"comprehensive":[28],"profiling":[29],"repertoire,":[33],"which":[34],"has":[35],"resulted":[36],"large":[38],"amounts":[39],"antibody":[41,65],"sequences":[42],"that":[43,154],"remain":[44],"be":[46],"further":[47],"analyzed.":[48],"In":[49],"this":[50,184],"study,":[51,190],"were":[53,68],"downloaded":[54],"from":[55,64,131],"IMGT/LIGM-DB":[56],"Sequence":[58],"Read":[59],"Archive":[60],"databases.":[61],"Contributing":[62],"features":[63],"heavy":[66],"chains":[67],"formulated":[69],"as":[70],"numerical":[71],"inputs":[72],"fed":[74],"into":[75],"ensemble":[77,116],"machine":[78],"learning":[79],"classifier":[80,106,117,179],"classify":[82],"antigen":[84],"specificity":[85],"six":[87],"classes":[88],"antibodies,":[90],"namely":[91],"anti-HIV-1,":[92],"anti-influenza":[93],"virus,":[94],"anti-pneumococcal":[95],"polysaccharide,":[96],"anti-citrullinated":[97],"protein,":[98],"anti-tetanus":[99],"toxoid":[100],"anti-hepatitis":[102],"B":[103],"virus.":[104],"The":[105,115,178],"was":[107,151,158],"validated":[108],"using":[109],"cross-validation":[110],"a":[112,119],"testing":[113,139],"dataset.":[114,140],"achieved":[118],"macro-average":[120],"area":[121],"under":[122],"receiver":[124],"operating":[125],"characteristic":[126],"curve":[127],"(AUC)":[128],"0.9246":[130],"10-fold":[133],"cross-validation,":[134],"0.9264":[136],"for":[137],"Among":[141],"contributing":[143,176],"features,":[144],"contribution":[146],"complementarity-determining":[149],"regions":[150,157],"53.1%":[152],"framework":[156],"46.9%,":[159],"amino":[162],"acid":[163],"mutation":[164],"rates":[165],"occupied":[166],"first":[168],"second":[170],"ranks":[171],"among":[172],"top":[174],"five":[175],"features.":[177],"insights":[181],"provided":[182],"study":[185],"could":[186],"promote":[187],"mechanistic":[189],"isolation":[191],"utilization":[193],"potential":[195],"therapeutic":[196],"antibodies.":[197]},"counts_by_year":[{"year":2026,"cited_by_count":2},{"year":2025,"cited_by_count":3},{"year":2024,"cited_by_count":1},{"year":2023,"cited_by_count":2}],"updated_date":"2026-05-21T06:26:12.895304","created_date":"2025-10-10T00:00:00"}
