{"id":"https://openalex.org/W3209094369","doi":"https://doi.org/10.1093/bib/bbab461","title":"Positive-unlabeled learning in bioinformatics and computational biology: a brief review","display_name":"Positive-unlabeled learning in bioinformatics and computational biology: a brief review","publication_year":2021,"publication_date":"2021-10-08","ids":{"openalex":"https://openalex.org/W3209094369","doi":"https://doi.org/10.1093/bib/bbab461","mag":"3209094369","pmid":"https://pubmed.ncbi.nlm.nih.gov/34729589"},"language":"en","primary_location":{"id":"doi:10.1093/bib/bbab461","is_oa":false,"landing_page_url":"https://doi.org/10.1093/bib/bbab461","pdf_url":null,"source":{"id":"https://openalex.org/S91767247","display_name":"Briefings in Bioinformatics","issn_l":"1467-5463","issn":["1467-5463","1477-4054"],"is_oa":false,"is_in_doaj":true,"is_core":true,"host_organization":"https://openalex.org/P4310311648","host_organization_name":"Oxford University Press","host_organization_lineage":["https://openalex.org/P4310311648","https://openalex.org/P4310311647"],"host_organization_lineage_names":["Oxford University Press","University of Oxford"],"type":"journal"},"license":null,"license_id":null,"version":"publishedVersion","is_accepted":true,"is_published":true,"raw_source_name":"Briefings in Bioinformatics","raw_type":"journal-article"},"type":"article","indexed_in":["crossref","doaj","pubmed"],"open_access":{"is_oa":true,"oa_status":"green","oa_url":"http://hdl.handle.net/10072/418969","any_repository_has_fulltext":true},"authorships":[{"author_position":"first","author":{"id":"https://openalex.org/A5063409460","display_name":"Fuyi Li","orcid":"https://orcid.org/0000-0001-5216-3213"},"institutions":[{"id":"https://openalex.org/I56590836","display_name":"Monash University","ror":"https://ror.org/02bfwt286","country_code":"AU","type":"education","lineage":["https://openalex.org/I56590836"]}],"countries":["AU"],"is_corresponding":false,"raw_author_name":"Fuyi Li","raw_affiliation_strings":["Monash University, Australia"],"raw_orcid":null,"affiliations":[{"raw_affiliation_string":"Monash University, Australia","institution_ids":["https://openalex.org/I56590836"]}]},{"author_position":"middle","author":{"id":"https://openalex.org/A5074978003","display_name":"Shuangyu Dong","orcid":"https://orcid.org/0000-0001-8064-2422"},"institutions":[{"id":"https://openalex.org/I56590836","display_name":"Monash University","ror":"https://ror.org/02bfwt286","country_code":"AU","type":"education","lineage":["https://openalex.org/I56590836"]}],"countries":["AU"],"is_corresponding":false,"raw_author_name":"Shuangyu Dong","raw_affiliation_strings":["Monash University, Australia"],"raw_orcid":null,"affiliations":[{"raw_affiliation_string":"Monash University, Australia","institution_ids":["https://openalex.org/I56590836"]}]},{"author_position":"middle","author":{"id":"https://openalex.org/A5042438246","display_name":"Andr\u00e9 Leier","orcid":"https://orcid.org/0000-0002-2647-2693"},"institutions":[],"countries":[],"is_corresponding":false,"raw_author_name":"Andr\u00e9 Leier","raw_affiliation_strings":["Department of Genetics, UAB School of Medicine, USA"],"raw_orcid":null,"affiliations":[{"raw_affiliation_string":"Department of Genetics, UAB School of Medicine, USA","institution_ids":[]}]},{"author_position":"middle","author":{"id":"https://openalex.org/A5008598836","display_name":"Meiya Han","orcid":null},"institutions":[{"id":"https://openalex.org/I56590836","display_name":"Monash University","ror":"https://ror.org/02bfwt286","country_code":"AU","type":"education","lineage":["https://openalex.org/I56590836"]}],"countries":["AU"],"is_corresponding":false,"raw_author_name":"Meiya Han","raw_affiliation_strings":["Department of Biochemistry and Molecular Biology, Monash University, Australia"],"raw_orcid":null,"affiliations":[{"raw_affiliation_string":"Department of Biochemistry and Molecular Biology, Monash University, Australia","institution_ids":["https://openalex.org/I56590836"]}]},{"author_position":"middle","author":{"id":"https://openalex.org/A5053676942","display_name":"Xudong Guo","orcid":"https://orcid.org/0000-0002-9607-2679"},"institutions":[{"id":"https://openalex.org/I21642278","display_name":"Ningxia University","ror":"https://ror.org/04j7b2v61","country_code":"CN","type":"education","lineage":["https://openalex.org/I21642278"]}],"countries":["CN"],"is_corresponding":false,"raw_author_name":"Xudong Guo","raw_affiliation_strings":["Ningxia University, China"],"raw_orcid":null,"affiliations":[{"raw_affiliation_string":"Ningxia University, China","institution_ids":["https://openalex.org/I21642278"]}]},{"author_position":"middle","author":{"id":"https://openalex.org/A5042066408","display_name":"Jing Xu","orcid":"https://orcid.org/0000-0001-8532-2241"},"institutions":[{"id":"https://openalex.org/I205237279","display_name":"Nankai University","ror":"https://ror.org/01y1kjr75","country_code":"CN","type":"education","lineage":["https://openalex.org/I205237279"]}],"countries":["CN"],"is_corresponding":false,"raw_author_name":"Jing Xu","raw_affiliation_strings":["Computer Science and Technology from Nankai University, China"],"raw_orcid":null,"affiliations":[{"raw_affiliation_string":"Computer Science and Technology from Nankai University, China","institution_ids":["https://openalex.org/I205237279"]}]},{"author_position":"middle","author":{"id":"https://openalex.org/A5100357665","display_name":"Xiaoyu Wang","orcid":"https://orcid.org/0009-0003-1706-7615"},"institutions":[{"id":"https://openalex.org/I2801239119","display_name":"Australian Regenerative Medicine Institute","ror":"https://ror.org/02qa5kg76","country_code":"AU","type":"facility","lineage":["https://openalex.org/I2801037857","https://openalex.org/I2801239119","https://openalex.org/I56590836"]},{"id":"https://openalex.org/I56590836","display_name":"Monash University","ror":"https://ror.org/02bfwt286","country_code":"AU","type":"education","lineage":["https://openalex.org/I56590836"]}],"countries":["AU"],"is_corresponding":false,"raw_author_name":"Xiaoyu Wang","raw_affiliation_strings":["Department of Biochemistry and Molecular Biology and Biomedicine Discovery Institute, Monash University, Australia"],"raw_orcid":null,"affiliations":[{"raw_affiliation_string":"Department of Biochemistry and Molecular Biology and Biomedicine Discovery Institute, Monash University, Australia","institution_ids":["https://openalex.org/I2801239119","https://openalex.org/I56590836"]}]},{"author_position":"middle","author":{"id":"https://openalex.org/A5008056593","display_name":"Shirui Pan","orcid":"https://orcid.org/0000-0003-0794-527X"},"institutions":[{"id":"https://openalex.org/I114017466","display_name":"University of Technology Sydney","ror":"https://ror.org/03f0f6041","country_code":"AU","type":"education","lineage":["https://openalex.org/I114017466"]}],"countries":["AU"],"is_corresponding":false,"raw_author_name":"Shirui Pan","raw_affiliation_strings":["University of Technology Sydney (UTS), Ultimo, NSW, Australia"],"raw_orcid":null,"affiliations":[{"raw_affiliation_string":"University of Technology Sydney (UTS), Ultimo, NSW, Australia","institution_ids":["https://openalex.org/I114017466"]}]},{"author_position":"middle","author":{"id":"https://openalex.org/A5066126756","display_name":"Cangzhi Jia","orcid":"https://orcid.org/0000-0002-4682-2881"},"institutions":[{"id":"https://openalex.org/I150609352","display_name":"Australian Maritime College","ror":"https://ror.org/05fv9c840","country_code":"AU","type":"education","lineage":["https://openalex.org/I129801699","https://openalex.org/I150609352"]}],"countries":["AU"],"is_corresponding":false,"raw_author_name":"Cangzhi Jia","raw_affiliation_strings":["College of Science, Dalian Maritime University, Australia"],"raw_orcid":null,"affiliations":[{"raw_affiliation_string":"College of Science, Dalian Maritime University, Australia","institution_ids":["https://openalex.org/I150609352"]}]},{"author_position":"middle","author":{"id":"https://openalex.org/A5101857691","display_name":"Yang Zhang","orcid":"https://orcid.org/0000-0001-9841-1710"},"institutions":[{"id":"https://openalex.org/I17145004","display_name":"Northwestern Polytechnical University","ror":"https://ror.org/01y0j0j86","country_code":"CN","type":"education","lineage":["https://openalex.org/I17145004"]}],"countries":["CN"],"is_corresponding":false,"raw_author_name":"Yang Zhang","raw_affiliation_strings":["Northwestern Polytechnical University, China"],"raw_orcid":null,"affiliations":[{"raw_affiliation_string":"Northwestern Polytechnical University, China","institution_ids":["https://openalex.org/I17145004"]}]},{"author_position":"middle","author":{"id":"https://openalex.org/A5058054791","display_name":"Geoffrey I. Webb","orcid":"https://orcid.org/0000-0001-9963-5169"},"institutions":[{"id":"https://openalex.org/I56590836","display_name":"Monash University","ror":"https://ror.org/02bfwt286","country_code":"AU","type":"education","lineage":["https://openalex.org/I56590836"]}],"countries":["AU"],"is_corresponding":false,"raw_author_name":"Geoffrey I Webb","raw_affiliation_strings":["Faculty of Information Technology at Monash University, Australia"],"raw_orcid":null,"affiliations":[{"raw_affiliation_string":"Faculty of Information Technology at Monash University, Australia","institution_ids":["https://openalex.org/I56590836"]}]},{"author_position":"middle","author":{"id":"https://openalex.org/A5056039026","display_name":"Lachlan Coin","orcid":"https://orcid.org/0000-0002-4300-455X"},"institutions":[{"id":"https://openalex.org/I165779595","display_name":"The University of Melbourne","ror":"https://ror.org/01ej9dk98","country_code":"AU","type":"education","lineage":["https://openalex.org/I165779595"]}],"countries":["AU"],"is_corresponding":false,"raw_author_name":"Lachlan J M Coin","raw_affiliation_strings":["Department of Clinical Pathology, University of Melbourne, Australia"],"raw_orcid":null,"affiliations":[{"raw_affiliation_string":"Department of Clinical Pathology, University of Melbourne, Australia","institution_ids":["https://openalex.org/I165779595"]}]},{"author_position":"middle","author":{"id":"https://openalex.org/A5100369818","display_name":"Chen Li","orcid":"https://orcid.org/0000-0002-1847-754X"},"institutions":[{"id":"https://openalex.org/I2801239119","display_name":"Australian Regenerative Medicine Institute","ror":"https://ror.org/02qa5kg76","country_code":"AU","type":"facility","lineage":["https://openalex.org/I2801037857","https://openalex.org/I2801239119","https://openalex.org/I56590836"]},{"id":"https://openalex.org/I56590836","display_name":"Monash University","ror":"https://ror.org/02bfwt286","country_code":"AU","type":"education","lineage":["https://openalex.org/I56590836"]}],"countries":["AU"],"is_corresponding":false,"raw_author_name":"Chen Li","raw_affiliation_strings":["Biomedicine Discovery Institute and Department of Biochemistry of Molecular Biology, Monash University, Australia"],"raw_orcid":null,"affiliations":[{"raw_affiliation_string":"Biomedicine Discovery Institute and Department of Biochemistry of Molecular Biology, Monash University, Australia","institution_ids":["https://openalex.org/I2801239119","https://openalex.org/I56590836"]}]},{"author_position":"last","author":{"id":"https://openalex.org/A5012709797","display_name":"Jiangning Song","orcid":"https://orcid.org/0000-0001-8031-9086"},"institutions":[{"id":"https://openalex.org/I2801239119","display_name":"Australian Regenerative Medicine Institute","ror":"https://ror.org/02qa5kg76","country_code":"AU","type":"facility","lineage":["https://openalex.org/I2801037857","https://openalex.org/I2801239119","https://openalex.org/I56590836"]},{"id":"https://openalex.org/I56590836","display_name":"Monash University","ror":"https://ror.org/02bfwt286","country_code":"AU","type":"education","lineage":["https://openalex.org/I56590836"]}],"countries":["AU"],"is_corresponding":false,"raw_author_name":"Jiangning Song","raw_affiliation_strings":["Monash Biomedicine Discovery Institute, Monash University, Melbourne, Australia"],"raw_orcid":"https://orcid.org/0000-0001-8031-9086","affiliations":[{"raw_affiliation_string":"Monash Biomedicine Discovery Institute, Monash University, Melbourne, Australia","institution_ids":["https://openalex.org/I2801239119","https://openalex.org/I56590836"]}]}],"institutions":[],"countries_distinct_count":2,"institutions_distinct_count":8,"corresponding_author_ids":[],"corresponding_institution_ids":[],"apc_list":{"value":4011,"currency":"USD","value_usd":4011},"apc_paid":null,"fwci":4.0754,"has_fulltext":false,"cited_by_count":85,"citation_normalized_percentile":{"value":0.95596621,"is_in_top_1_percent":false,"is_in_top_10_percent":true},"cited_by_percentile_year":{"min":99,"max":100},"biblio":{"volume":"23","issue":"1","first_page":null,"last_page":null},"is_retracted":false,"is_paratext":false,"is_xpac":false,"primary_topic":{"id":"https://openalex.org/T12576","display_name":"vaccines and immunoinformatics approaches","score":0.9976000189781189,"subfield":{"id":"https://openalex.org/subfields/1312","display_name":"Molecular Biology"},"field":{"id":"https://openalex.org/fields/13","display_name":"Biochemistry, Genetics and Molecular Biology"},"domain":{"id":"https://openalex.org/domains/1","display_name":"Life Sciences"}},"topics":[{"id":"https://openalex.org/T12576","display_name":"vaccines and immunoinformatics approaches","score":0.9976000189781189,"subfield":{"id":"https://openalex.org/subfields/1312","display_name":"Molecular Biology"},"field":{"id":"https://openalex.org/fields/13","display_name":"Biochemistry, Genetics and Molecular Biology"},"domain":{"id":"https://openalex.org/domains/1","display_name":"Life Sciences"}},{"id":"https://openalex.org/T12254","display_name":"Machine Learning in Bioinformatics","score":0.9921000003814697,"subfield":{"id":"https://openalex.org/subfields/1312","display_name":"Molecular Biology"},"field":{"id":"https://openalex.org/fields/13","display_name":"Biochemistry, Genetics and Molecular Biology"},"domain":{"id":"https://openalex.org/domains/1","display_name":"Life Sciences"}},{"id":"https://openalex.org/T12535","display_name":"Machine Learning and Data Classification","score":0.9907000064849854,"subfield":{"id":"https://openalex.org/subfields/1702","display_name":"Artificial Intelligence"},"field":{"id":"https://openalex.org/fields/17","display_name":"Computer Science"},"domain":{"id":"https://openalex.org/domains/3","display_name":"Physical Sciences"}}],"keywords":[{"id":"https://openalex.org/keywords/machine-learning","display_name":"Machine learning","score":0.7420694231987},{"id":"https://openalex.org/keywords/artificial-intelligence","display_name":"Artificial intelligence","score":0.7250906229019165},{"id":"https://openalex.org/keywords/computer-science","display_name":"Computer science","score":0.7149591445922852},{"id":"https://openalex.org/keywords/classifier","display_name":"Classifier (UML)","score":0.6570948362350464},{"id":"https://openalex.org/keywords/binary-classification","display_name":"Binary classification","score":0.5808432102203369},{"id":"https://openalex.org/keywords/biological-data","display_name":"Biological data","score":0.49551379680633545},{"id":"https://openalex.org/keywords/identification","display_name":"Identification (biology)","score":0.426460862159729},{"id":"https://openalex.org/keywords/bioinformatics","display_name":"Bioinformatics","score":0.21622639894485474},{"id":"https://openalex.org/keywords/biology","display_name":"Biology","score":0.10710901021957397},{"id":"https://openalex.org/keywords/support-vector-machine","display_name":"Support vector machine","score":0.09624788165092468}],"concepts":[{"id":"https://openalex.org/C119857082","wikidata":"https://www.wikidata.org/wiki/Q2539","display_name":"Machine learning","level":1,"score":0.7420694231987},{"id":"https://openalex.org/C154945302","wikidata":"https://www.wikidata.org/wiki/Q11660","display_name":"Artificial intelligence","level":1,"score":0.7250906229019165},{"id":"https://openalex.org/C41008148","wikidata":"https://www.wikidata.org/wiki/Q21198","display_name":"Computer science","level":0,"score":0.7149591445922852},{"id":"https://openalex.org/C95623464","wikidata":"https://www.wikidata.org/wiki/Q1096149","display_name":"Classifier (UML)","level":2,"score":0.6570948362350464},{"id":"https://openalex.org/C66905080","wikidata":"https://www.wikidata.org/wiki/Q17005494","display_name":"Binary classification","level":3,"score":0.5808432102203369},{"id":"https://openalex.org/C201797286","wikidata":"https://www.wikidata.org/wiki/Q4914986","display_name":"Biological data","level":2,"score":0.49551379680633545},{"id":"https://openalex.org/C116834253","wikidata":"https://www.wikidata.org/wiki/Q2039217","display_name":"Identification (biology)","level":2,"score":0.426460862159729},{"id":"https://openalex.org/C60644358","wikidata":"https://www.wikidata.org/wiki/Q128570","display_name":"Bioinformatics","level":1,"score":0.21622639894485474},{"id":"https://openalex.org/C86803240","wikidata":"https://www.wikidata.org/wiki/Q420","display_name":"Biology","level":0,"score":0.10710901021957397},{"id":"https://openalex.org/C12267149","wikidata":"https://www.wikidata.org/wiki/Q282453","display_name":"Support vector machine","level":2,"score":0.09624788165092468},{"id":"https://openalex.org/C59822182","wikidata":"https://www.wikidata.org/wiki/Q441","display_name":"Botany","level":1,"score":0.0}],"mesh":[{"descriptor_ui":"D000069553","descriptor_name":"Supervised Machine Learning","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D000069553","descriptor_name":"Supervised Machine Learning","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D000069553","descriptor_name":"Supervised Machine Learning","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D000465","descriptor_name":"Algorithms","qualifier_ui":null,"qualifier_name":null,"is_major_topic":true},{"descriptor_ui":"D000465","descriptor_name":"Algorithms","qualifier_ui":null,"qualifier_name":null,"is_major_topic":true},{"descriptor_ui":"D000465","descriptor_name":"Algorithms","qualifier_ui":null,"qualifier_name":null,"is_major_topic":true},{"descriptor_ui":"D019295","descriptor_name":"Computational Biology","qualifier_ui":"Q000379","qualifier_name":"methods","is_major_topic":true},{"descriptor_ui":"D019295","descriptor_name":"Computational Biology","qualifier_ui":"Q000379","qualifier_name":"methods","is_major_topic":true},{"descriptor_ui":"D019295","descriptor_name":"Computational Biology","qualifier_ui":"Q000379","qualifier_name":"methods","is_major_topic":true}],"locations_count":5,"locations":[{"id":"doi:10.1093/bib/bbab461","is_oa":false,"landing_page_url":"https://doi.org/10.1093/bib/bbab461","pdf_url":null,"source":{"id":"https://openalex.org/S91767247","display_name":"Briefings in Bioinformatics","issn_l":"1467-5463","issn":["1467-5463","1477-4054"],"is_oa":false,"is_in_doaj":true,"is_core":true,"host_organization":"https://openalex.org/P4310311648","host_organization_name":"Oxford University Press","host_organization_lineage":["https://openalex.org/P4310311648","https://openalex.org/P4310311647"],"host_organization_lineage_names":["Oxford University Press","University of Oxford"],"type":"journal"},"license":null,"license_id":null,"version":"publishedVersion","is_accepted":true,"is_published":true,"raw_source_name":"Briefings in Bioinformatics","raw_type":"journal-article"},{"id":"pmid:34729589","is_oa":false,"landing_page_url":"https://pubmed.ncbi.nlm.nih.gov/34729589","pdf_url":null,"source":{"id":"https://openalex.org/S4306525036","display_name":"PubMed","issn_l":null,"issn":null,"is_oa":false,"is_in_doaj":false,"is_core":false,"host_organization":"https://openalex.org/I1299303238","host_organization_name":"National Institutes of Health","host_organization_lineage":["https://openalex.org/I1299303238"],"host_organization_lineage_names":[],"type":"repository"},"license":null,"license_id":null,"version":"publishedVersion","is_accepted":true,"is_published":true,"raw_source_name":"Briefings in bioinformatics","raw_type":null},{"id":"pmh:oai:digital.library.adelaide.edu.au:2440/139737","is_oa":false,"landing_page_url":"https://hdl.handle.net/2440/139737","pdf_url":null,"source":{"id":"https://openalex.org/S4306401835","display_name":"Adelaide Research & Scholarship (AR&S) (University of Adelaide)","issn_l":null,"issn":null,"is_oa":false,"is_in_doaj":false,"is_core":false,"host_organization":"https://openalex.org/I5681781","host_organization_name":"The University of Adelaide","host_organization_lineage":["https://openalex.org/I5681781"],"host_organization_lineage_names":[],"type":"repository"},"license":null,"license_id":null,"version":"submittedVersion","is_accepted":false,"is_published":false,"raw_source_name":"http://dx.doi.org/10.1093/bib/bbab461","raw_type":"Journal article"},{"id":"pmh:oai:jupiter.its.unimelb.edu.au:11343/333172","is_oa":false,"landing_page_url":"https://doi.org/10.1093/bib/bbab461.","pdf_url":null,"source":{"id":"https://openalex.org/S4377196259","display_name":"Minerva Access (University of Melbourne)","issn_l":null,"issn":null,"is_oa":false,"is_in_doaj":false,"is_core":false,"host_organization":"https://openalex.org/I165779595","host_organization_name":"The University of Melbourne","host_organization_lineage":["https://openalex.org/I165779595"],"host_organization_lineage_names":[],"type":"repository"},"license":null,"license_id":null,"version":"submittedVersion","is_accepted":false,"is_published":false,"raw_source_name":null,"raw_type":"Journal Article"},{"id":"pmh:oai:research-repository.griffith.edu.au:10072/418969","is_oa":true,"landing_page_url":"http://hdl.handle.net/10072/418969","pdf_url":null,"source":{"id":"https://openalex.org/S4306402548","display_name":"Griffith Research Online (Griffith University, Queensland, Australia)","issn_l":null,"issn":null,"is_oa":false,"is_in_doaj":false,"is_core":false,"host_organization":"https://openalex.org/I11701301","host_organization_name":"Griffith University","host_organization_lineage":["https://openalex.org/I11701301"],"host_organization_lineage_names":[],"type":"repository"},"license":"other-oa","license_id":"https://openalex.org/licenses/other-oa","version":"submittedVersion","is_accepted":false,"is_published":false,"raw_source_name":"","raw_type":"Journal article"}],"best_oa_location":{"id":"pmh:oai:research-repository.griffith.edu.au:10072/418969","is_oa":true,"landing_page_url":"http://hdl.handle.net/10072/418969","pdf_url":null,"source":{"id":"https://openalex.org/S4306402548","display_name":"Griffith Research Online (Griffith University, Queensland, Australia)","issn_l":null,"issn":null,"is_oa":false,"is_in_doaj":false,"is_core":false,"host_organization":"https://openalex.org/I11701301","host_organization_name":"Griffith University","host_organization_lineage":["https://openalex.org/I11701301"],"host_organization_lineage_names":[],"type":"repository"},"license":"other-oa","license_id":"https://openalex.org/licenses/other-oa","version":"submittedVersion","is_accepted":false,"is_published":false,"raw_source_name":"","raw_type":"Journal article"},"sustainable_development_goals":[],"awards":[{"id":"https://openalex.org/G5887758824","display_name":null,"funder_award_id":"APP1103384","funder_id":"https://openalex.org/F4320334705","funder_display_name":"National Health and Medical Research Council"},{"id":"https://openalex.org/G7686493431","display_name":"Harnessing systems biology by integrating proteomics and immunopeptidomics to understand prostate cancer carcinogenesis, diagnosis and treatment","funder_award_id":"1143366","funder_id":"https://openalex.org/F4320334705","funder_display_name":"National Health and Medical Research Council"},{"id":"https://openalex.org/G8247526401","display_name":"DIAMONDS - Diagnosis and Management of Febrile Illness using RNA Personalised Molecular Signature Diagnosis","funder_award_id":"1195743","funder_id":"https://openalex.org/F4320334705","funder_display_name":"National Health and Medical Research Council"}],"funders":[{"id":"https://openalex.org/F4320334705","display_name":"National Health and Medical Research Council","ror":"https://ror.org/011kf5r70"}],"has_content":{"pdf":false,"grobid_xml":false},"content_urls":null,"referenced_works_count":129,"referenced_works":["https://openalex.org/W28412257","https://openalex.org/W40955826","https://openalex.org/W1503405070","https://openalex.org/W1749236003","https://openalex.org/W1764627421","https://openalex.org/W1965887320","https://openalex.org/W1966716922","https://openalex.org/W1968969471","https://openalex.org/W1969730822","https://openalex.org/W1978033244","https://openalex.org/W1985372952","https://openalex.org/W1988790447","https://openalex.org/W2003875143","https://openalex.org/W2017169927","https://openalex.org/W2039473152","https://openalex.org/W2041971917","https://openalex.org/W2046673993","https://openalex.org/W2048947602","https://openalex.org/W2061351061","https://openalex.org/W2082903539","https://openalex.org/W2083654996","https://openalex.org/W2086338626","https://openalex.org/W2097532544","https://openalex.org/W2098740506","https://openalex.org/W2101029276","https://openalex.org/W2102471157","https://openalex.org/W2103525038","https://openalex.org/W2108740562","https://openalex.org/W2112397593","https://openalex.org/W2122189635","https://openalex.org/W2123958887","https://openalex.org/W2124266758","https://openalex.org/W2130652100","https://openalex.org/W2132870739","https://openalex.org/W2137096596","https://openalex.org/W2142047467","https://openalex.org/W2149941588","https://openalex.org/W2150028022","https://openalex.org/W2152885278","https://openalex.org/W2155440340","https://openalex.org/W2155592813","https://openalex.org/W2170283814","https://openalex.org/W2191189641","https://openalex.org/W2248525918","https://openalex.org/W2416585422","https://openalex.org/W2417990257","https://openalex.org/W2466501638","https://openalex.org/W2490135372","https://openalex.org/W2519744449","https://openalex.org/W2528774686","https://openalex.org/W2531500048","https://openalex.org/W2556519015","https://openalex.org/W2592839484","https://openalex.org/W2726870159","https://openalex.org/W2747623831","https://openalex.org/W2750857942","https://openalex.org/W2766389776","https://openalex.org/W2780936345","https://openalex.org/W2793168264","https://openalex.org/W2793402357","https://openalex.org/W2810225085","https://openalex.org/W2888955024","https://openalex.org/W2890951984","https://openalex.org/W2899867782","https://openalex.org/W2908351833","https://openalex.org/W2922210059","https://openalex.org/W2935703330","https://openalex.org/W2947763854","https://openalex.org/W2955502047","https://openalex.org/W2956228567","https://openalex.org/W2966590054","https://openalex.org/W2967960129","https://openalex.org/W2970416468","https://openalex.org/W2970602317","https://openalex.org/W2972955359","https://openalex.org/W2977291005","https://openalex.org/W2981242070","https://openalex.org/W2984353870","https://openalex.org/W2984580262","https://openalex.org/W2988273873","https://openalex.org/W2989917577","https://openalex.org/W3007033512","https://openalex.org/W3009820544","https://openalex.org/W3012990378","https://openalex.org/W3014208063","https://openalex.org/W3015964336","https://openalex.org/W3021092377","https://openalex.org/W3024086681","https://openalex.org/W3025373576","https://openalex.org/W3026425509","https://openalex.org/W3028912875","https://openalex.org/W3034527519","https://openalex.org/W3037299379","https://openalex.org/W3046305306","https://openalex.org/W3099731021","https://openalex.org/W3101215053","https://openalex.org/W3103292928","https://openalex.org/W3104285666","https://openalex.org/W3104422614","https://openalex.org/W3109860017","https://openalex.org/W3122375914","https://openalex.org/W3134163647","https://openalex.org/W3134761005","https://openalex.org/W3135060681","https://openalex.org/W3135644204","https://openalex.org/W3149861441","https://openalex.org/W3156011032","https://openalex.org/W3156930754","https://openalex.org/W3160859670","https://openalex.org/W3161702043","https://openalex.org/W3164046276","https://openalex.org/W3167897985","https://openalex.org/W3173360330","https://openalex.org/W3174724403","https://openalex.org/W3174855653","https://openalex.org/W3179652920","https://openalex.org/W3183469109","https://openalex.org/W4232714830","https://openalex.org/W4236358448","https://openalex.org/W4294149524","https://openalex.org/W6629898328","https://openalex.org/W6644672003","https://openalex.org/W6646838413","https://openalex.org/W6662013283","https://openalex.org/W6687510768","https://openalex.org/W6723068831","https://openalex.org/W6778247287","https://openalex.org/W6780062285","https://openalex.org/W6793595179"],"related_works":["https://openalex.org/W2898732673","https://openalex.org/W2410053581","https://openalex.org/W2383658677","https://openalex.org/W3123203398","https://openalex.org/W2961085424","https://openalex.org/W1972473893","https://openalex.org/W4401552848","https://openalex.org/W4382934300","https://openalex.org/W2121061354","https://openalex.org/W4285388059"],"abstract_inverted_index":{"Conventional":[0],"supervised":[1],"binary":[2],"classification":[3,20,37],"algorithms":[4,105],"have":[5,106],"been":[6,107],"widely":[7],"applied":[8],"to":[9,34,57,74,78,109,138],"address":[10,110,139],"significant":[11],"research":[12],"questions":[13],"using":[14],"biological":[15,112,141,153,212],"and":[16,31,48,85,121,157,170,203],"biomedical":[17],"data.":[18],"This":[19],"scheme":[21,70],"requires":[22],"two":[23],"fully":[24],"labeled":[25],"classes":[26],"of":[27,61,89,95,131,167,178,196],"data":[28,45],"(e.g.":[29],"positive":[30,66,83,96],"negative":[32,50,98],"samples)":[33],"train":[35],"a":[36,86,93,129,193],"model.":[38],"However,":[39],"in":[40,201],"many":[41],"bioinformatics":[42,202],"applications,":[43],"labeling":[44],"is":[46],"laborious,":[47],"the":[49,58,62,76,164,175,197],"samples":[51,84,91],"might":[52],"be":[53],"potentially":[54],"mislabeled":[55],"due":[56],"limited":[59,82],"sensitivity":[60],"experimental":[63],"equipment.":[64],"The":[65],"unlabeled":[67,90],"(PU)":[68],"learning":[69,104,135,151,169,180,199,208],"was":[71],"therefore":[72],"proposed":[73],"enable":[75],"classifier":[77,155],"learn":[79],"directly":[80],"from":[81],"large":[87],"number":[88],"(i.e.":[92],"mixture":[94],"or":[97],"samples).":[99],"To":[100],"date,":[101],"several":[102],"PU":[103,134,150,168,179,198,207],"developed":[108],"various":[111,140],"questions,":[113],"such":[114],"as":[115,188],"sequence":[116],"identification,":[117],"functional":[118],"site":[119],"characterization":[120],"interaction":[122],"prediction.":[123],"In":[124],"this":[125],"paper,":[126],"we":[127],"revisit":[128],"collection":[130],"29":[132],"state-of-the-art":[133],"bioinformatic":[136],"applications":[137],"questions.":[142],"Various":[143],"important":[144],"aspects":[145],"are":[146],"extensively":[147],"discussed,":[148],"including":[149],"methodology,":[152],"application,":[154],"design":[156],"evaluation":[158],"strategy.":[159],"We":[160,182],"also":[161],"comment":[162],"on":[163],"existing":[165],"issues":[166],"offer":[171],"our":[172,185],"perspectives":[173],"for":[174,192,210],"future":[176],"development":[177],"applications.":[181,213],"anticipate":[183],"that":[184],"work":[186],"serves":[187],"an":[189],"instrumental":[190],"guideline":[191],"better":[194],"understanding":[195],"framework":[200],"further":[204],"developing":[205],"next-generation":[206],"frameworks":[209],"critical":[211]},"counts_by_year":[{"year":2026,"cited_by_count":8},{"year":2025,"cited_by_count":22},{"year":2024,"cited_by_count":27},{"year":2023,"cited_by_count":16},{"year":2022,"cited_by_count":12}],"updated_date":"2026-08-08T01:25:22.217667","created_date":"2025-10-10T00:00:00"}
