{"id":"https://openalex.org/W3201750263","doi":"https://doi.org/10.1093/bib/bbab408","title":"An overview of machine learning methods for monotherapy drug response prediction","display_name":"An overview of machine learning methods for monotherapy drug response prediction","publication_year":2021,"publication_date":"2021-09-08","ids":{"openalex":"https://openalex.org/W3201750263","doi":"https://doi.org/10.1093/bib/bbab408","mag":"3201750263","pmid":"https://pubmed.ncbi.nlm.nih.gov/34619752"},"language":"en","primary_location":{"id":"doi:10.1093/bib/bbab408","is_oa":true,"landing_page_url":"https://doi.org/10.1093/bib/bbab408","pdf_url":"https://academic.oup.com/bib/article-pdf/23/1/bbab408/42229550/bbab408.pdf","source":{"id":"https://openalex.org/S91767247","display_name":"Briefings in Bioinformatics","issn_l":"1467-5463","issn":["1467-5463","1477-4054"],"is_oa":false,"is_in_doaj":true,"is_core":true,"host_organization":"https://openalex.org/P4310311648","host_organization_name":"Oxford University Press","host_organization_lineage":["https://openalex.org/P4310311648","https://openalex.org/P4310311647"],"host_organization_lineage_names":["Oxford University Press","University of Oxford"],"type":"journal"},"license":"cc-by","license_id":"https://openalex.org/licenses/cc-by","version":"publishedVersion","is_accepted":true,"is_published":true,"raw_source_name":"Briefings in Bioinformatics","raw_type":"journal-article"},"type":"article","indexed_in":["crossref","doaj","pubmed"],"open_access":{"is_oa":true,"oa_status":"hybrid","oa_url":"https://academic.oup.com/bib/article-pdf/23/1/bbab408/42229550/bbab408.pdf","any_repository_has_fulltext":true},"authorships":[{"author_position":"first","author":{"id":"https://openalex.org/A5024363153","display_name":"Farzaneh Firoozbakht","orcid":"https://orcid.org/0000-0002-4737-3133"},"institutions":[{"id":"https://openalex.org/I157536573","display_name":"Institut Pasteur","ror":"https://ror.org/0495fxg12","country_code":"FR","type":"nonprofit","lineage":["https://openalex.org/I157536573"]}],"countries":["FR"],"is_corresponding":true,"raw_author_name":"Farzaneh Firoozbakht","raw_affiliation_strings":["Systems Biology Group, Department of Computational Biology, Institut Pasteur, Paris, France"],"raw_orcid":"https://orcid.org/0000-0002-4737-3133","affiliations":[{"raw_affiliation_string":"Systems Biology Group, Department of Computational Biology, Institut Pasteur, Paris, France","institution_ids":["https://openalex.org/I157536573"]}]},{"author_position":"middle","author":{"id":"https://openalex.org/A5026099791","display_name":"Behnam Yousefi","orcid":"https://orcid.org/0000-0003-0995-2000"},"institutions":[{"id":"https://openalex.org/I157536573","display_name":"Institut Pasteur","ror":"https://ror.org/0495fxg12","country_code":"FR","type":"nonprofit","lineage":["https://openalex.org/I157536573"]},{"id":"https://openalex.org/I39804081","display_name":"Sorbonne Universit\u00e9","ror":"https://ror.org/02en5vm52","country_code":"FR","type":"education","lineage":["https://openalex.org/I39804081"]}],"countries":["FR"],"is_corresponding":false,"raw_author_name":"Behnam Yousefi","raw_affiliation_strings":["Sorbonne Universit\u00e9, \u00c9cole Doctorale Complexite du Vivant, Paris, France","Systems Biology Group, Department of Computational Biology, Institut Pasteur, Paris, France"],"raw_orcid":"https://orcid.org/0000-0003-0995-2000","affiliations":[{"raw_affiliation_string":"Sorbonne Universit\u00e9, \u00c9cole Doctorale Complexite du Vivant, Paris, France","institution_ids":["https://openalex.org/I39804081"]},{"raw_affiliation_string":"Systems Biology Group, Department of Computational Biology, Institut Pasteur, Paris, France","institution_ids":["https://openalex.org/I157536573"]}]},{"author_position":"last","author":{"id":"https://openalex.org/A5059640936","display_name":"Benno Schwikowski","orcid":"https://orcid.org/0000-0001-5127-5619"},"institutions":[{"id":"https://openalex.org/I157536573","display_name":"Institut Pasteur","ror":"https://ror.org/0495fxg12","country_code":"FR","type":"nonprofit","lineage":["https://openalex.org/I157536573"]}],"countries":["FR"],"is_corresponding":false,"raw_author_name":"Benno Schwikowski","raw_affiliation_strings":["Systems Biology Group, Department of Computational Biology, Institut Pasteur, Paris, France"],"raw_orcid":"https://orcid.org/0000-0001-5127-5619","affiliations":[{"raw_affiliation_string":"Systems Biology Group, Department of Computational Biology, Institut Pasteur, Paris, France","institution_ids":["https://openalex.org/I157536573"]}]}],"institutions":[],"countries_distinct_count":1,"institutions_distinct_count":3,"corresponding_author_ids":["https://openalex.org/A5024363153"],"corresponding_institution_ids":["https://openalex.org/I157536573"],"apc_list":{"value":4011,"currency":"USD","value_usd":4011},"apc_paid":{"value":3180,"currency":"EUR","value_usd":3429},"fwci":6.697,"has_fulltext":true,"cited_by_count":70,"citation_normalized_percentile":{"value":0.97269135,"is_in_top_1_percent":false,"is_in_top_10_percent":true},"cited_by_percentile_year":{"min":98,"max":100},"biblio":{"volume":"23","issue":"1","first_page":null,"last_page":null},"is_retracted":false,"is_paratext":false,"is_xpac":false,"primary_topic":{"id":"https://openalex.org/T10211","display_name":"Computational Drug Discovery Methods","score":0.9998999834060669,"subfield":{"id":"https://openalex.org/subfields/1703","display_name":"Computational Theory and Mathematics"},"field":{"id":"https://openalex.org/fields/17","display_name":"Computer Science"},"domain":{"id":"https://openalex.org/domains/3","display_name":"Physical Sciences"}},"topics":[{"id":"https://openalex.org/T10211","display_name":"Computational Drug Discovery Methods","score":0.9998999834060669,"subfield":{"id":"https://openalex.org/subfields/1703","display_name":"Computational Theory and Mathematics"},"field":{"id":"https://openalex.org/fields/17","display_name":"Computer Science"},"domain":{"id":"https://openalex.org/domains/3","display_name":"Physical Sciences"}},{"id":"https://openalex.org/T11948","display_name":"Machine Learning in Materials Science","score":0.9787999987602234,"subfield":{"id":"https://openalex.org/subfields/2505","display_name":"Materials Chemistry"},"field":{"id":"https://openalex.org/fields/25","display_name":"Materials Science"},"domain":{"id":"https://openalex.org/domains/3","display_name":"Physical Sciences"}},{"id":"https://openalex.org/T12255","display_name":"Biosimilars and Bioanalytical Methods","score":0.9761000275611877,"subfield":{"id":"https://openalex.org/subfields/2403","display_name":"Immunology"},"field":{"id":"https://openalex.org/fields/24","display_name":"Immunology and Microbiology"},"domain":{"id":"https://openalex.org/domains/1","display_name":"Life Sciences"}}],"keywords":[{"id":"https://openalex.org/keywords/computer-science","display_name":"Computer science","score":0.771583080291748},{"id":"https://openalex.org/keywords/machine-learning","display_name":"Machine learning","score":0.6665517091751099},{"id":"https://openalex.org/keywords/artificial-intelligence","display_name":"Artificial intelligence","score":0.5440387725830078},{"id":"https://openalex.org/keywords/drug-response","display_name":"Drug response","score":0.5269166827201843},{"id":"https://openalex.org/keywords/drug","display_name":"Drug","score":0.45868396759033203},{"id":"https://openalex.org/keywords/code","display_name":"Code (set theory)","score":0.4290620684623718},{"id":"https://openalex.org/keywords/software","display_name":"Software","score":0.4187946319580078},{"id":"https://openalex.org/keywords/medicine","display_name":"Medicine","score":0.13680815696716309},{"id":"https://openalex.org/keywords/pharmacology","display_name":"Pharmacology","score":0.10493910312652588}],"concepts":[{"id":"https://openalex.org/C41008148","wikidata":"https://www.wikidata.org/wiki/Q21198","display_name":"Computer science","level":0,"score":0.771583080291748},{"id":"https://openalex.org/C119857082","wikidata":"https://www.wikidata.org/wiki/Q2539","display_name":"Machine learning","level":1,"score":0.6665517091751099},{"id":"https://openalex.org/C154945302","wikidata":"https://www.wikidata.org/wiki/Q11660","display_name":"Artificial intelligence","level":1,"score":0.5440387725830078},{"id":"https://openalex.org/C2994119904","wikidata":"https://www.wikidata.org/wiki/Q1251001","display_name":"Drug response","level":3,"score":0.5269166827201843},{"id":"https://openalex.org/C2780035454","wikidata":"https://www.wikidata.org/wiki/Q8386","display_name":"Drug","level":2,"score":0.45868396759033203},{"id":"https://openalex.org/C2776760102","wikidata":"https://www.wikidata.org/wiki/Q5139990","display_name":"Code (set theory)","level":3,"score":0.4290620684623718},{"id":"https://openalex.org/C2777904410","wikidata":"https://www.wikidata.org/wiki/Q7397","display_name":"Software","level":2,"score":0.4187946319580078},{"id":"https://openalex.org/C71924100","wikidata":"https://www.wikidata.org/wiki/Q11190","display_name":"Medicine","level":0,"score":0.13680815696716309},{"id":"https://openalex.org/C98274493","wikidata":"https://www.wikidata.org/wiki/Q128406","display_name":"Pharmacology","level":1,"score":0.10493910312652588},{"id":"https://openalex.org/C199360897","wikidata":"https://www.wikidata.org/wiki/Q9143","display_name":"Programming language","level":1,"score":0.0},{"id":"https://openalex.org/C177264268","wikidata":"https://www.wikidata.org/wiki/Q1514741","display_name":"Set (abstract data type)","level":2,"score":0.0}],"mesh":[{"descriptor_ui":"D000069550","descriptor_name":"Machine Learning","qualifier_ui":null,"qualifier_name":null,"is_major_topic":true},{"descriptor_ui":"D000069550","descriptor_name":"Machine Learning","qualifier_ui":null,"qualifier_name":null,"is_major_topic":true},{"descriptor_ui":"D000069550","descriptor_name":"Machine Learning","qualifier_ui":null,"qualifier_name":null,"is_major_topic":true},{"descriptor_ui":"D000069550","descriptor_name":"Machine Learning","qualifier_ui":null,"qualifier_name":null,"is_major_topic":true},{"descriptor_ui":"D012984","descriptor_name":"Software","qualifier_ui":null,"qualifier_name":null,"is_major_topic":true},{"descriptor_ui":"D012984","descriptor_name":"Software","qualifier_ui":null,"qualifier_name":null,"is_major_topic":true},{"descriptor_ui":"D012984","descriptor_name":"Software","qualifier_ui":null,"qualifier_name":null,"is_major_topic":true},{"descriptor_ui":"D012984","descriptor_name":"Software","qualifier_ui":null,"qualifier_name":null,"is_major_topic":true}],"locations_count":5,"locations":[{"id":"doi:10.1093/bib/bbab408","is_oa":true,"landing_page_url":"https://doi.org/10.1093/bib/bbab408","pdf_url":"https://academic.oup.com/bib/article-pdf/23/1/bbab408/42229550/bbab408.pdf","source":{"id":"https://openalex.org/S91767247","display_name":"Briefings in Bioinformatics","issn_l":"1467-5463","issn":["1467-5463","1477-4054"],"is_oa":false,"is_in_doaj":true,"is_core":true,"host_organization":"https://openalex.org/P4310311648","host_organization_name":"Oxford University Press","host_organization_lineage":["https://openalex.org/P4310311648","https://openalex.org/P4310311647"],"host_organization_lineage_names":["Oxford University Press","University of Oxford"],"type":"journal"},"license":"cc-by","license_id":"https://openalex.org/licenses/cc-by","version":"publishedVersion","is_accepted":true,"is_published":true,"raw_source_name":"Briefings in Bioinformatics","raw_type":"journal-article"},{"id":"pmid:34619752","is_oa":false,"landing_page_url":"https://pubmed.ncbi.nlm.nih.gov/34619752","pdf_url":null,"source":{"id":"https://openalex.org/S4306525036","display_name":"PubMed","issn_l":null,"issn":null,"is_oa":false,"is_in_doaj":false,"is_core":false,"host_organization":"https://openalex.org/I1299303238","host_organization_name":"National Institutes of Health","host_organization_lineage":["https://openalex.org/I1299303238"],"host_organization_lineage_names":[],"type":"repository"},"license":null,"license_id":null,"version":"publishedVersion","is_accepted":true,"is_published":true,"raw_source_name":"Briefings in bioinformatics","raw_type":null},{"id":"pmh:oai:zenodo.org:5614849","is_oa":true,"landing_page_url":"https://zenodo.org/record/5614849","pdf_url":"https://zenodo.org/record/5614849","source":{"id":"https://openalex.org/S4306400562","display_name":"Zenodo (CERN European Organization for Nuclear Research)","issn_l":null,"issn":null,"is_oa":true,"is_in_doaj":false,"is_core":false,"host_organization":"https://openalex.org/I67311998","host_organization_name":"European Organization for Nuclear Research","host_organization_lineage":["https://openalex.org/I67311998"],"host_organization_lineage_names":[],"type":"repository"},"license":"other-oa","license_id":"https://openalex.org/licenses/other-oa","version":"submittedVersion","is_accepted":false,"is_published":false,"raw_source_name":"","raw_type":"info:eu-repo/semantics/article"},{"id":"pmh:oai:HAL:hal-03376028v1","is_oa":true,"landing_page_url":"https://hal.sorbonne-universite.fr/hal-03376028","pdf_url":null,"source":{"id":"https://openalex.org/S4306402512","display_name":"HAL (Le Centre pour la Communication Scientifique Directe)","issn_l":null,"issn":null,"is_oa":false,"is_in_doaj":false,"is_core":false,"host_organization":"https://openalex.org/I1294671590","host_organization_name":"Centre National de la Recherche Scientifique","host_organization_lineage":["https://openalex.org/I1294671590"],"host_organization_lineage_names":[],"type":"repository"},"license":"cc-by","license_id":"https://openalex.org/licenses/cc-by","version":"submittedVersion","is_accepted":false,"is_published":false,"raw_source_name":"Briefings in Bioinformatics, 2021, pp.bbab408. &#x27E8;10.1093/bib/bbab408&#x27E9;","raw_type":"Journal articles"},{"id":"pmh:oai:pubmedcentral.nih.gov:8769705","is_oa":true,"landing_page_url":"https://www.ncbi.nlm.nih.gov/pmc/articles/8769705","pdf_url":null,"source":{"id":"https://openalex.org/S2764455111","display_name":"PubMed Central","issn_l":null,"issn":null,"is_oa":true,"is_in_doaj":false,"is_core":false,"host_organization":"https://openalex.org/I1299303238","host_organization_name":"National Institutes of Health","host_organization_lineage":["https://openalex.org/I1299303238"],"host_organization_lineage_names":[],"type":"repository"},"license":"cc-by","license_id":"https://openalex.org/licenses/cc-by","version":"submittedVersion","is_accepted":false,"is_published":false,"raw_source_name":"Brief Bioinform","raw_type":"Text"}],"best_oa_location":{"id":"doi:10.1093/bib/bbab408","is_oa":true,"landing_page_url":"https://doi.org/10.1093/bib/bbab408","pdf_url":"https://academic.oup.com/bib/article-pdf/23/1/bbab408/42229550/bbab408.pdf","source":{"id":"https://openalex.org/S91767247","display_name":"Briefings in Bioinformatics","issn_l":"1467-5463","issn":["1467-5463","1477-4054"],"is_oa":false,"is_in_doaj":true,"is_core":true,"host_organization":"https://openalex.org/P4310311648","host_organization_name":"Oxford University Press","host_organization_lineage":["https://openalex.org/P4310311648","https://openalex.org/P4310311647"],"host_organization_lineage_names":["Oxford University Press","University of Oxford"],"type":"journal"},"license":"cc-by","license_id":"https://openalex.org/licenses/cc-by","version":"publishedVersion","is_accepted":true,"is_published":true,"raw_source_name":"Briefings in Bioinformatics","raw_type":"journal-article"},"sustainable_development_goals":[],"awards":[],"funders":[],"has_content":{"pdf":true,"grobid_xml":false},"content_urls":{"pdf":"https://content.openalex.org/works/W3201750263.pdf"},"referenced_works_count":185,"referenced_works":["https://openalex.org/W17970349","https://openalex.org/W19078547","https://openalex.org/W258831793","https://openalex.org/W758418924","https://openalex.org/W961626949","https://openalex.org/W1224843282","https://openalex.org/W1505191356","https://openalex.org/W1565050238","https://openalex.org/W1569512666","https://openalex.org/W1766594731","https://openalex.org/W1872239493","https://openalex.org/W1964009822","https://openalex.org/W1981276685","https://openalex.org/W1981421409","https://openalex.org/W1983989471","https://openalex.org/W1998096683","https://openalex.org/W1998898494","https://openalex.org/W2004638738","https://openalex.org/W2010773093","https://openalex.org/W2011474181","https://openalex.org/W2015270439","https://openalex.org/W2018663224","https://openalex.org/W2019607817","https://openalex.org/W2034235577","https://openalex.org/W2043398720","https://openalex.org/W2063343795","https://openalex.org/W2065180801","https://openalex.org/W2067046795","https://openalex.org/W2073503722","https://openalex.org/W2080686146","https://openalex.org/W2087312216","https://openalex.org/W2087692688","https://openalex.org/W2102729801","https://openalex.org/W2103017472","https://openalex.org/W2108933868","https://openalex.org/W2110071511","https://openalex.org/W2110366569","https://openalex.org/W2114533766","https://openalex.org/W2120204563","https://openalex.org/W2122825543","https://openalex.org/W2125789330","https://openalex.org/W2129860849","https://openalex.org/W2130240391","https://openalex.org/W2134257943","https://openalex.org/W2135007932","https://openalex.org/W2135046866","https://openalex.org/W2140593657","https://openalex.org/W2156665896","https://openalex.org/W2158485828","https://openalex.org/W2164298117","https://openalex.org/W2167395325","https://openalex.org/W2171033594","https://openalex.org/W2171741583","https://openalex.org/W2171960770","https://openalex.org/W2175970000","https://openalex.org/W2195388612","https://openalex.org/W2197241765","https://openalex.org/W2282821441","https://openalex.org/W2290847742","https://openalex.org/W2293825098","https://openalex.org/W2318806991","https://openalex.org/W2333198304","https://openalex.org/W2344714812","https://openalex.org/W2407075689","https://openalex.org/W2416657206","https://openalex.org/W2432718434","https://openalex.org/W2461427403","https://openalex.org/W2508784321","https://openalex.org/W2509229138","https://openalex.org/W2513486311","https://openalex.org/W2554401505","https://openalex.org/W2557547609","https://openalex.org/W2558475804","https://openalex.org/W2559588208","https://openalex.org/W2560714335","https://openalex.org/W2569335714","https://openalex.org/W2586629973","https://openalex.org/W2592340788","https://openalex.org/W2624021832","https://openalex.org/W2735647642","https://openalex.org/W2742005115","https://openalex.org/W2742007096","https://openalex.org/W2747036018","https://openalex.org/W2759360483","https://openalex.org/W2767593474","https://openalex.org/W2784530807","https://openalex.org/W2789758093","https://openalex.org/W2792522034","https://openalex.org/W2795257806","https://openalex.org/W2795679584","https://openalex.org/W2803052217","https://openalex.org/W2805406480","https://openalex.org/W2807463161","https://openalex.org/W2811201370","https://openalex.org/W2887685819","https://openalex.org/W2891837572","https://openalex.org/W2893531376","https://openalex.org/W2895134839","https://openalex.org/W2895357007","https://openalex.org/W2896725104","https://openalex.org/W2900569176","https://openalex.org/W2901246787","https://openalex.org/W2904999046","https://openalex.org/W2907492528","https://openalex.org/W2911535432","https://openalex.org/W2911964244","https://openalex.org/W2911969472","https://openalex.org/W2912083425","https://openalex.org/W2912552806","https://openalex.org/W2917858269","https://openalex.org/W2919115771","https://openalex.org/W2921800758","https://openalex.org/W2924122678","https://openalex.org/W2942056403","https://openalex.org/W2942173509","https://openalex.org/W2946834067","https://openalex.org/W2948246500","https://openalex.org/W2948897453","https://openalex.org/W2949159188","https://openalex.org/W2950063908","https://openalex.org/W2951934944","https://openalex.org/W2953253500","https://openalex.org/W2955021173","https://openalex.org/W2955057587","https://openalex.org/W2955502047","https://openalex.org/W2963046727","https://openalex.org/W2964113829","https://openalex.org/W2964746016","https://openalex.org/W2965750004","https://openalex.org/W2981742563","https://openalex.org/W2982894044","https://openalex.org/W2983879675","https://openalex.org/W2988891807","https://openalex.org/W2994958138","https://openalex.org/W2995175648","https://openalex.org/W2995320383","https://openalex.org/W2996752936","https://openalex.org/W3000373012","https://openalex.org/W3000469142","https://openalex.org/W3001022866","https://openalex.org/W3004094041","https://openalex.org/W3005505802","https://openalex.org/W3006733956","https://openalex.org/W3007745092","https://openalex.org/W3008395627","https://openalex.org/W3030534638","https://openalex.org/W3033196316","https://openalex.org/W3033741522","https://openalex.org/W3035604179","https://openalex.org/W3040925197","https://openalex.org/W3041880399","https://openalex.org/W3048965072","https://openalex.org/W3094280424","https://openalex.org/W3098100992","https://openalex.org/W3100157108","https://openalex.org/W3103349938","https://openalex.org/W3112620286","https://openalex.org/W3116278528","https://openalex.org/W3117393006","https://openalex.org/W3123360092","https://openalex.org/W3124481204","https://openalex.org/W3126851937","https://openalex.org/W3130891725","https://openalex.org/W3137962378","https://openalex.org/W3154997013","https://openalex.org/W3159077618","https://openalex.org/W3159743235","https://openalex.org/W3190097155","https://openalex.org/W4210257598","https://openalex.org/W4229847499","https://openalex.org/W4234509242","https://openalex.org/W4248672808","https://openalex.org/W6600744685","https://openalex.org/W6600771123","https://openalex.org/W6609721046","https://openalex.org/W6627987743","https://openalex.org/W6637965938","https://openalex.org/W6664257448","https://openalex.org/W6680532697","https://openalex.org/W6685350579","https://openalex.org/W6725027371","https://openalex.org/W6738964360","https://openalex.org/W6756216553","https://openalex.org/W6762564781","https://openalex.org/W6780883802"],"related_works":["https://openalex.org/W4206379684","https://openalex.org/W2366105490","https://openalex.org/W2580680567","https://openalex.org/W2961085424","https://openalex.org/W4285170202","https://openalex.org/W114270996","https://openalex.org/W4249200654","https://openalex.org/W2396656278","https://openalex.org/W1997438133","https://openalex.org/W2321880618"],"abstract_inverted_index":{"For":[0],"an":[1],"increasing":[2],"number":[3],"of":[4,36,46,61,94,109,131,141,150],"preclinical":[5],"samples,":[6],"both":[7],"detailed":[8],"molecular":[9],"profiles":[10],"and":[11,23,57,75,89,96,98,113,122,135,158],"their":[12,87,136],"responses":[13,26],"to":[14,21,33,127,138],"various":[15],"drugs":[16],"are":[17,103,117,125],"becoming":[18],"available.":[19],"Efforts":[20],"understand,":[22],"predict,":[24],"drug":[25,49,68,142],"in":[27,84],"a":[28,34,54,72,106],"data-driven":[29],"manner":[30],"have":[31],"led":[32],"proliferation":[35],"machine":[37],"learning":[38],"(ML)":[39],"methods,":[40,134],"with":[41,71,105],"the":[42,62,110,128,139],"longer":[43],"term":[44],"ambition":[45],"predicting":[47],"clinical":[48],"responses.":[50],"Here,":[51],"we":[52],"provide":[53,147],"uniquely":[55],"wide":[56],"deep":[58],"systematic":[59,73,148],"review":[60],"rapidly":[63],"evolving":[64],"literature":[65],"on":[66],"monotherapy":[67],"response":[69,143],"prediction,":[70],"characterization":[74],"classification":[76],"that":[77],"comprises":[78],"more":[79],"than":[80],"70":[81],"ML":[82,101,115,133],"methods":[83,116],"13":[85],"subclasses,":[86],"input":[88],"output":[90],"data":[91,153],"types,":[92],"modes":[93],"evaluation,":[95],"code":[97],"software":[99],"availability.":[100],"experts":[102],"provided":[104],"fundamental":[107],"understanding":[108],"biological":[111],"problem,":[112],"how":[114],"configured":[118],"for":[119,156],"it.":[120],"Biologists":[121],"biomedical":[123],"researchers":[124],"introduced":[126],"basic":[129],"principles":[130],"applicable":[132],"application":[137],"problem":[140],"prediction.":[144],"We":[145],"also":[146],"overviews":[149],"commonly":[151],"used":[152,155],"sources":[154],"training":[157],"evaluation":[159],"methods.":[160]},"counts_by_year":[{"year":2026,"cited_by_count":12},{"year":2025,"cited_by_count":16},{"year":2024,"cited_by_count":21},{"year":2023,"cited_by_count":15},{"year":2022,"cited_by_count":6}],"updated_date":"2026-05-29T09:21:14.243279","created_date":"2025-10-10T00:00:00"}
