{"id":"https://openalex.org/W3202662220","doi":"https://doi.org/10.1093/bib/bbab406","title":"Advances, challenges and opportunities of phylogenetic and social network analysis using COVID-19 data","display_name":"Advances, challenges and opportunities of phylogenetic and social network analysis using COVID-19 data","publication_year":2021,"publication_date":"2021-09-08","ids":{"openalex":"https://openalex.org/W3202662220","doi":"https://doi.org/10.1093/bib/bbab406","mag":"3202662220","pmid":"https://pubmed.ncbi.nlm.nih.gov/34601563"},"language":"en","primary_location":{"id":"doi:10.1093/bib/bbab406","is_oa":true,"landing_page_url":"https://doi.org/10.1093/bib/bbab406","pdf_url":"https://academic.oup.com/bib/article-pdf/23/1/bbab406/42230684/bbab406.pdf","source":{"id":"https://openalex.org/S91767247","display_name":"Briefings in Bioinformatics","issn_l":"1467-5463","issn":["1467-5463","1477-4054"],"is_oa":false,"is_in_doaj":true,"is_core":true,"host_organization":"https://openalex.org/P4310311648","host_organization_name":"Oxford University Press","host_organization_lineage":["https://openalex.org/P4310311648","https://openalex.org/P4310311647"],"host_organization_lineage_names":["Oxford University Press","University of Oxford"],"type":"journal"},"license":null,"license_id":null,"version":"publishedVersion","is_accepted":true,"is_published":true,"raw_source_name":"Briefings in Bioinformatics","raw_type":"journal-article"},"type":"article","indexed_in":["crossref","doaj","pubmed"],"open_access":{"is_oa":true,"oa_status":"bronze","oa_url":"https://academic.oup.com/bib/article-pdf/23/1/bbab406/42230684/bbab406.pdf","any_repository_has_fulltext":false},"authorships":[{"author_position":"first","author":{"id":"https://openalex.org/A5100372068","display_name":"Yue Wang","orcid":"https://orcid.org/0000-0002-7761-2721"},"institutions":[{"id":"https://openalex.org/I55732556","display_name":"Arizona State University","ror":"https://ror.org/03efmqc40","country_code":"US","type":"education","lineage":["https://openalex.org/I55732556"]}],"countries":["US"],"is_corresponding":false,"raw_author_name":"Yue Wang","raw_affiliation_strings":["School of Mathematical and Natural Science, Arizona State University , 4701 W Thunderbird Rd, 85306, Arizona, USA"],"raw_orcid":null,"affiliations":[{"raw_affiliation_string":"School of Mathematical and Natural Science, Arizona State University , 4701 W Thunderbird Rd, 85306, Arizona, USA","institution_ids":["https://openalex.org/I55732556"]}]},{"author_position":"middle","author":{"id":"https://openalex.org/A5101702353","display_name":"Yunpeng Zhao","orcid":"https://orcid.org/0000-0003-3018-5563"},"institutions":[{"id":"https://openalex.org/I55732556","display_name":"Arizona State University","ror":"https://ror.org/03efmqc40","country_code":"US","type":"education","lineage":["https://openalex.org/I55732556"]}],"countries":["US"],"is_corresponding":false,"raw_author_name":"Yunpeng Zhao","raw_affiliation_strings":["School of Mathematical and Natural Science, Arizona State University , 4701 W Thunderbird Rd, 85306, Arizona, USA"],"raw_orcid":null,"affiliations":[{"raw_affiliation_string":"School of Mathematical and Natural Science, Arizona State University , 4701 W Thunderbird Rd, 85306, Arizona, USA","institution_ids":["https://openalex.org/I55732556"]}]},{"author_position":"last","author":{"id":"https://openalex.org/A5068910064","display_name":"Qing Pan","orcid":"https://orcid.org/0000-0003-1253-0490"},"institutions":[{"id":"https://openalex.org/I193531525","display_name":"George Washington University","ror":"https://ror.org/00y4zzh67","country_code":"US","type":"education","lineage":["https://openalex.org/I193531525"]}],"countries":["US"],"is_corresponding":true,"raw_author_name":"Qing Pan","raw_affiliation_strings":["Department of Statistics, George Washington University , 801 22nd St. NW, 20052, Washington DC, USA"],"raw_orcid":null,"affiliations":[{"raw_affiliation_string":"Department of Statistics, George Washington University , 801 22nd St. NW, 20052, Washington DC, USA","institution_ids":["https://openalex.org/I193531525"]}]}],"institutions":[],"countries_distinct_count":1,"institutions_distinct_count":2,"corresponding_author_ids":["https://openalex.org/A5068910064"],"corresponding_institution_ids":["https://openalex.org/I193531525"],"apc_list":{"value":4011,"currency":"USD","value_usd":4011},"apc_paid":null,"fwci":0.4442,"has_fulltext":true,"cited_by_count":8,"citation_normalized_percentile":{"value":0.58808038,"is_in_top_1_percent":false,"is_in_top_10_percent":false},"cited_by_percentile_year":{"min":89,"max":97},"biblio":{"volume":"23","issue":"1","first_page":null,"last_page":null},"is_retracted":false,"is_paratext":false,"is_xpac":false,"primary_topic":{"id":"https://openalex.org/T10887","display_name":"Bioinformatics and Genomic Networks","score":0.9896000027656555,"subfield":{"id":"https://openalex.org/subfields/1312","display_name":"Molecular Biology"},"field":{"id":"https://openalex.org/fields/13","display_name":"Biochemistry, Genetics and Molecular Biology"},"domain":{"id":"https://openalex.org/domains/1","display_name":"Life Sciences"}},"topics":[{"id":"https://openalex.org/T10887","display_name":"Bioinformatics and Genomic Networks","score":0.9896000027656555,"subfield":{"id":"https://openalex.org/subfields/1312","display_name":"Molecular Biology"},"field":{"id":"https://openalex.org/fields/13","display_name":"Biochemistry, Genetics and Molecular Biology"},"domain":{"id":"https://openalex.org/domains/1","display_name":"Life Sciences"}},{"id":"https://openalex.org/T11135","display_name":"Virology and Viral Diseases","score":0.9817000031471252,"subfield":{"id":"https://openalex.org/subfields/2713","display_name":"Epidemiology"},"field":{"id":"https://openalex.org/fields/27","display_name":"Medicine"},"domain":{"id":"https://openalex.org/domains/4","display_name":"Health Sciences"}},{"id":"https://openalex.org/T10015","display_name":"Genomics and Phylogenetic Studies","score":0.9810000061988831,"subfield":{"id":"https://openalex.org/subfields/1312","display_name":"Molecular Biology"},"field":{"id":"https://openalex.org/fields/13","display_name":"Biochemistry, Genetics and Molecular Biology"},"domain":{"id":"https://openalex.org/domains/1","display_name":"Life Sciences"}}],"keywords":[{"id":"https://openalex.org/keywords/coronavirus-disease-2019","display_name":"Coronavirus disease 2019 (COVID-19)","score":0.8163825273513794},{"id":"https://openalex.org/keywords/phylogenetic-tree","display_name":"Phylogenetic tree","score":0.6546996235847473},{"id":"https://openalex.org/keywords/2019-20-coronavirus-outbreak","display_name":"2019-20 coronavirus outbreak","score":0.6303976774215698},{"id":"https://openalex.org/keywords/severe-acute-respiratory-syndrome-coronavirus-2","display_name":"Severe acute respiratory syndrome coronavirus 2 (SARS-CoV-2)","score":0.6094766855239868},{"id":"https://openalex.org/keywords/data-science","display_name":"Data science","score":0.5705164074897766},{"id":"https://openalex.org/keywords/social-network-analysis","display_name":"Social network analysis","score":0.5208038091659546},{"id":"https://openalex.org/keywords/pandemic","display_name":"Pandemic","score":0.45802056789398193},{"id":"https://openalex.org/keywords/computer-science","display_name":"Computer science","score":0.45129698514938354},{"id":"https://openalex.org/keywords/biology","display_name":"Biology","score":0.25629156827926636},{"id":"https://openalex.org/keywords/virology","display_name":"Virology","score":0.24653813242912292},{"id":"https://openalex.org/keywords/world-wide-web","display_name":"World Wide Web","score":0.2173965573310852},{"id":"https://openalex.org/keywords/social-media","display_name":"Social media","score":0.17604035139083862},{"id":"https://openalex.org/keywords/medicine","display_name":"Medicine","score":0.12960150837898254},{"id":"https://openalex.org/keywords/outbreak","display_name":"Outbreak","score":0.10708498954772949},{"id":"https://openalex.org/keywords/genetics","display_name":"Genetics","score":0.10468977689743042},{"id":"https://openalex.org/keywords/infectious-disease","display_name":"Infectious disease (medical specialty)","score":0.06939089298248291}],"concepts":[{"id":"https://openalex.org/C3008058167","wikidata":"https://www.wikidata.org/wiki/Q84263196","display_name":"Coronavirus disease 2019 (COVID-19)","level":4,"score":0.8163825273513794},{"id":"https://openalex.org/C193252679","wikidata":"https://www.wikidata.org/wiki/Q242125","display_name":"Phylogenetic tree","level":3,"score":0.6546996235847473},{"id":"https://openalex.org/C3006700255","wikidata":"https://www.wikidata.org/wiki/Q81068910","display_name":"2019-20 coronavirus outbreak","level":3,"score":0.6303976774215698},{"id":"https://openalex.org/C3007834351","wikidata":"https://www.wikidata.org/wiki/Q82069695","display_name":"Severe acute respiratory syndrome coronavirus 2 (SARS-CoV-2)","level":5,"score":0.6094766855239868},{"id":"https://openalex.org/C2522767166","wikidata":"https://www.wikidata.org/wiki/Q2374463","display_name":"Data science","level":1,"score":0.5705164074897766},{"id":"https://openalex.org/C114713312","wikidata":"https://www.wikidata.org/wiki/Q7551269","display_name":"Social network analysis","level":3,"score":0.5208038091659546},{"id":"https://openalex.org/C89623803","wikidata":"https://www.wikidata.org/wiki/Q12184","display_name":"Pandemic","level":5,"score":0.45802056789398193},{"id":"https://openalex.org/C41008148","wikidata":"https://www.wikidata.org/wiki/Q21198","display_name":"Computer science","level":0,"score":0.45129698514938354},{"id":"https://openalex.org/C86803240","wikidata":"https://www.wikidata.org/wiki/Q420","display_name":"Biology","level":0,"score":0.25629156827926636},{"id":"https://openalex.org/C159047783","wikidata":"https://www.wikidata.org/wiki/Q7215","display_name":"Virology","level":1,"score":0.24653813242912292},{"id":"https://openalex.org/C136764020","wikidata":"https://www.wikidata.org/wiki/Q466","display_name":"World Wide Web","level":1,"score":0.2173965573310852},{"id":"https://openalex.org/C518677369","wikidata":"https://www.wikidata.org/wiki/Q202833","display_name":"Social media","level":2,"score":0.17604035139083862},{"id":"https://openalex.org/C71924100","wikidata":"https://www.wikidata.org/wiki/Q11190","display_name":"Medicine","level":0,"score":0.12960150837898254},{"id":"https://openalex.org/C116675565","wikidata":"https://www.wikidata.org/wiki/Q3241045","display_name":"Outbreak","level":2,"score":0.10708498954772949},{"id":"https://openalex.org/C54355233","wikidata":"https://www.wikidata.org/wiki/Q7162","display_name":"Genetics","level":1,"score":0.10468977689743042},{"id":"https://openalex.org/C524204448","wikidata":"https://www.wikidata.org/wiki/Q788926","display_name":"Infectious disease (medical specialty)","level":3,"score":0.06939089298248291},{"id":"https://openalex.org/C2779134260","wikidata":"https://www.wikidata.org/wiki/Q12136","display_name":"Disease","level":2,"score":0.0},{"id":"https://openalex.org/C142724271","wikidata":"https://www.wikidata.org/wiki/Q7208","display_name":"Pathology","level":1,"score":0.0},{"id":"https://openalex.org/C104317684","wikidata":"https://www.wikidata.org/wiki/Q7187","display_name":"Gene","level":2,"score":0.0}],"mesh":[{"descriptor_ui":"D000086382","descriptor_name":"COVID-19","qualifier_ui":"Q000276","qualifier_name":"immunology","is_major_topic":true},{"descriptor_ui":"D000086382","descriptor_name":"COVID-19","qualifier_ui":"Q000276","qualifier_name":"immunology","is_major_topic":true},{"descriptor_ui":"D000086382","descriptor_name":"COVID-19","qualifier_ui":"Q000276","qualifier_name":"immunology","is_major_topic":true},{"descriptor_ui":"D000086382","descriptor_name":"COVID-19","qualifier_ui":"Q000453","qualifier_name":"epidemiology","is_major_topic":true},{"descriptor_ui":"D000086382","descriptor_name":"COVID-19","qualifier_ui":"Q000453","qualifier_name":"epidemiology","is_major_topic":true},{"descriptor_ui":"D000086382","descriptor_name":"COVID-19","qualifier_ui":"Q000453","qualifier_name":"epidemiology","is_major_topic":true},{"descriptor_ui":"D000086382","descriptor_name":"COVID-19","qualifier_ui":"Q000635","qualifier_name":"transmission","is_major_topic":true},{"descriptor_ui":"D000086382","descriptor_name":"COVID-19","qualifier_ui":"Q000635","qualifier_name":"transmission","is_major_topic":true},{"descriptor_ui":"D000086382","descriptor_name":"COVID-19","qualifier_ui":"Q000635","qualifier_name":"transmission","is_major_topic":true},{"descriptor_ui":"D000086402","descriptor_name":"SARS-CoV-2","qualifier_ui":"Q000235","qualifier_name":"genetics","is_major_topic":true},{"descriptor_ui":"D000086402","descriptor_name":"SARS-CoV-2","qualifier_ui":"Q000235","qualifier_name":"genetics","is_major_topic":true},{"descriptor_ui":"D000086402","descriptor_name":"SARS-CoV-2","qualifier_ui":"Q000235","qualifier_name":"genetics","is_major_topic":true},{"descriptor_ui":"D000086402","descriptor_name":"SARS-CoV-2","qualifier_ui":"Q000276","qualifier_name":"immunology","is_major_topic":true},{"descriptor_ui":"D000086402","descriptor_name":"SARS-CoV-2","qualifier_ui":"Q000276","qualifier_name":"immunology","is_major_topic":true},{"descriptor_ui":"D000086402","descriptor_name":"SARS-CoV-2","qualifier_ui":"Q000276","qualifier_name":"immunology","is_major_topic":true},{"descriptor_ui":"D000086402","descriptor_name":"SARS-CoV-2","qualifier_ui":"Q000472","qualifier_name":"pathogenicity","is_major_topic":true},{"descriptor_ui":"D000086402","descriptor_name":"SARS-CoV-2","qualifier_ui":"Q000472","qualifier_name":"pathogenicity","is_major_topic":true},{"descriptor_ui":"D000086402","descriptor_name":"SARS-CoV-2","qualifier_ui":"Q000472","qualifier_name":"pathogenicity","is_major_topic":true},{"descriptor_ui":"D006801","descriptor_name":"Humans","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D006801","descriptor_name":"Humans","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D006801","descriptor_name":"Humans","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D008954","descriptor_name":"Models, Biological","qualifier_ui":null,"qualifier_name":null,"is_major_topic":true},{"descriptor_ui":"D008954","descriptor_name":"Models, Biological","qualifier_ui":null,"qualifier_name":null,"is_major_topic":true},{"descriptor_ui":"D008954","descriptor_name":"Models, Biological","qualifier_ui":null,"qualifier_name":null,"is_major_topic":true},{"descriptor_ui":"D010802","descriptor_name":"Phylogeny","qualifier_ui":null,"qualifier_name":null,"is_major_topic":true},{"descriptor_ui":"D010802","descriptor_name":"Phylogeny","qualifier_ui":null,"qualifier_name":null,"is_major_topic":true},{"descriptor_ui":"D010802","descriptor_name":"Phylogeny","qualifier_ui":null,"qualifier_name":null,"is_major_topic":true},{"descriptor_ui":"D058873","descriptor_name":"Pandemics","qualifier_ui":null,"qualifier_name":null,"is_major_topic":true},{"descriptor_ui":"D058873","descriptor_name":"Pandemics","qualifier_ui":null,"qualifier_name":null,"is_major_topic":true},{"descriptor_ui":"D058873","descriptor_name":"Pandemics","qualifier_ui":null,"qualifier_name":null,"is_major_topic":true}],"locations_count":2,"locations":[{"id":"doi:10.1093/bib/bbab406","is_oa":true,"landing_page_url":"https://doi.org/10.1093/bib/bbab406","pdf_url":"https://academic.oup.com/bib/article-pdf/23/1/bbab406/42230684/bbab406.pdf","source":{"id":"https://openalex.org/S91767247","display_name":"Briefings in Bioinformatics","issn_l":"1467-5463","issn":["1467-5463","1477-4054"],"is_oa":false,"is_in_doaj":true,"is_core":true,"host_organization":"https://openalex.org/P4310311648","host_organization_name":"Oxford University Press","host_organization_lineage":["https://openalex.org/P4310311648","https://openalex.org/P4310311647"],"host_organization_lineage_names":["Oxford University Press","University of Oxford"],"type":"journal"},"license":null,"license_id":null,"version":"publishedVersion","is_accepted":true,"is_published":true,"raw_source_name":"Briefings in Bioinformatics","raw_type":"journal-article"},{"id":"pmid:34601563","is_oa":false,"landing_page_url":"https://pubmed.ncbi.nlm.nih.gov/34601563","pdf_url":null,"source":{"id":"https://openalex.org/S4306525036","display_name":"PubMed","issn_l":null,"issn":null,"is_oa":false,"is_in_doaj":false,"is_core":false,"host_organization":"https://openalex.org/I1299303238","host_organization_name":"National Institutes of Health","host_organization_lineage":["https://openalex.org/I1299303238"],"host_organization_lineage_names":[],"type":"repository"},"license":null,"license_id":null,"version":"publishedVersion","is_accepted":true,"is_published":true,"raw_source_name":"Briefings in bioinformatics","raw_type":null}],"best_oa_location":{"id":"doi:10.1093/bib/bbab406","is_oa":true,"landing_page_url":"https://doi.org/10.1093/bib/bbab406","pdf_url":"https://academic.oup.com/bib/article-pdf/23/1/bbab406/42230684/bbab406.pdf","source":{"id":"https://openalex.org/S91767247","display_name":"Briefings in Bioinformatics","issn_l":"1467-5463","issn":["1467-5463","1477-4054"],"is_oa":false,"is_in_doaj":true,"is_core":true,"host_organization":"https://openalex.org/P4310311648","host_organization_name":"Oxford University Press","host_organization_lineage":["https://openalex.org/P4310311648","https://openalex.org/P4310311647"],"host_organization_lineage_names":["Oxford University Press","University of Oxford"],"type":"journal"},"license":null,"license_id":null,"version":"publishedVersion","is_accepted":true,"is_published":true,"raw_source_name":"Briefings in Bioinformatics","raw_type":"journal-article"},"sustainable_development_goals":[{"score":0.6899999976158142,"id":"https://metadata.un.org/sdg/3","display_name":"Good health and well-being"}],"awards":[{"id":"https://openalex.org/G5372659370","display_name":"BD Spokes: SPOKE: SOUTH: Large-Scale Medical Informatics for Patient Care Coordination and Engagement","funder_award_id":"1636933","funder_id":"https://openalex.org/F4320306076","funder_display_name":"National Science Foundation"},{"id":"https://openalex.org/G6910641553","display_name":"RII Track 2 FEC: Multi-Scale Integrative Approach to Digital Health: Collaborative Research and Education in Smart Health in West Virginia and Arkansas","funder_award_id":"1920920","funder_id":"https://openalex.org/F4320306076","funder_display_name":"National Science Foundation"}],"funders":[{"id":"https://openalex.org/F4320306076","display_name":"National Science Foundation","ror":"https://ror.org/021nxhr62"}],"has_content":{"grobid_xml":true,"pdf":true},"content_urls":{"pdf":"https://content.openalex.org/works/W3202662220.pdf","grobid_xml":"https://content.openalex.org/works/W3202662220.grobid-xml"},"referenced_works_count":171,"referenced_works":["https://openalex.org/W76152643","https://openalex.org/W229097380","https://openalex.org/W655089096","https://openalex.org/W1504702575","https://openalex.org/W1533368239","https://openalex.org/W1533514485","https://openalex.org/W1593676244","https://openalex.org/W1964795578","https://openalex.org/W1968185435","https://openalex.org/W1969042907","https://openalex.org/W1970999032","https://openalex.org/W1972309850","https://openalex.org/W1997698259","https://openalex.org/W2000795465","https://openalex.org/W2006489688","https://openalex.org/W2008620264","https://openalex.org/W2008907996","https://openalex.org/W2009596137","https://openalex.org/W2016065782","https://openalex.org/W2016958746","https://openalex.org/W2017102965","https://openalex.org/W2020165868","https://openalex.org/W2026551295","https://openalex.org/W2029276959","https://openalex.org/W2030962485","https://openalex.org/W2041076979","https://openalex.org/W2045514650","https://openalex.org/W2056574818","https://openalex.org/W2058815839","https://openalex.org/W2073627497","https://openalex.org/W2076195270","https://openalex.org/W2078259918","https://openalex.org/W2078980460","https://openalex.org/W2084775350","https://openalex.org/W2092672051","https://openalex.org/W2094693634","https://openalex.org/W2096192437","https://openalex.org/W2096420865","https://openalex.org/W2097706568","https://openalex.org/W2102907934","https://openalex.org/W2103977882","https://openalex.org/W2105329815","https://openalex.org/W2107665951","https://openalex.org/W2107808362","https://openalex.org/W2108911240","https://openalex.org/W2108947463","https://openalex.org/W2112090702","https://openalex.org/W2112483442","https://openalex.org/W2112615110","https://openalex.org/W2117059491","https://openalex.org/W2118795000","https://openalex.org/W2119284380","https://openalex.org/W2123639897","https://openalex.org/W2124637492","https://openalex.org/W2125910575","https://openalex.org/W2127322768","https://openalex.org/W2130354913","https://openalex.org/W2132926880","https://openalex.org/W2134389439","https://openalex.org/W2137499573","https://openalex.org/W2138879180","https://openalex.org/W2141877163","https://openalex.org/W2143867397","https://openalex.org/W2144362290","https://openalex.org/W2147660889","https://openalex.org/W2147942759","https://openalex.org/W2152688507","https://openalex.org/W2155418451","https://openalex.org/W2156925439","https://openalex.org/W2158293950","https://openalex.org/W2160378127","https://openalex.org/W2161647617","https://openalex.org/W2161728228","https://openalex.org/W2162000763","https://openalex.org/W2164582219","https://openalex.org/W2166867592","https://openalex.org/W2167482691","https://openalex.org/W2168175751","https://openalex.org/W2169353806","https://openalex.org/W2192780418","https://openalex.org/W2209490188","https://openalex.org/W2229908198","https://openalex.org/W2235645467","https://openalex.org/W2238050746","https://openalex.org/W2258865027","https://openalex.org/W2278336807","https://openalex.org/W2293660367","https://openalex.org/W2296761881","https://openalex.org/W2323517320","https://openalex.org/W2506717766","https://openalex.org/W2508447274","https://openalex.org/W2525230286","https://openalex.org/W2603552761","https://openalex.org/W2604272474","https://openalex.org/W2746487413","https://openalex.org/W2747288535","https://openalex.org/W2892875286","https://openalex.org/W2902522629","https://openalex.org/W2979846625","https://openalex.org/W2986564628","https://openalex.org/W3001897055","https://openalex.org/W3004570632","https://openalex.org/W3007831031","https://openalex.org/W3008088233","https://openalex.org/W3008294222","https://openalex.org/W3012944241","https://openalex.org/W3013953691","https://openalex.org/W3014199470","https://openalex.org/W3015444032","https://openalex.org/W3016535995","https://openalex.org/W3020049202","https://openalex.org/W3021396888","https://openalex.org/W3021677987","https://openalex.org/W3021922824","https://openalex.org/W3022825990","https://openalex.org/W3023034539","https://openalex.org/W3023752122","https://openalex.org/W3025466058","https://openalex.org/W3025717907","https://openalex.org/W3026764413","https://openalex.org/W3031713996","https://openalex.org/W3033201346","https://openalex.org/W3035907798","https://openalex.org/W3037134143","https://openalex.org/W3040134252","https://openalex.org/W3044956907","https://openalex.org/W3047045277","https://openalex.org/W3047427841","https://openalex.org/W3048238828","https://openalex.org/W3050170032","https://openalex.org/W3080535610","https://openalex.org/W3083866604","https://openalex.org/W3085784695","https://openalex.org/W3085879587","https://openalex.org/W3091734424","https://openalex.org/W3092254137","https://openalex.org/W3094122417","https://openalex.org/W3099011804","https://openalex.org/W3100508066","https://openalex.org/W3109175407","https://openalex.org/W3110696950","https://openalex.org/W3111088188","https://openalex.org/W3129908107","https://openalex.org/W3131692293","https://openalex.org/W3135574951","https://openalex.org/W3152891762","https://openalex.org/W3155904483","https://openalex.org/W3156249605","https://openalex.org/W3162193769","https://openalex.org/W3182807823","https://openalex.org/W4205910801","https://openalex.org/W4234567516","https://openalex.org/W4238452917","https://openalex.org/W4251993049","https://openalex.org/W4300840296","https://openalex.org/W4319054025","https://openalex.org/W6608852248","https://openalex.org/W6655106295","https://openalex.org/W6674647444","https://openalex.org/W6676512796","https://openalex.org/W6676840641","https://openalex.org/W6676931166","https://openalex.org/W6679201749","https://openalex.org/W6685221449","https://openalex.org/W6689475862","https://openalex.org/W6690112785","https://openalex.org/W6701026114","https://openalex.org/W6757189924","https://openalex.org/W6777785943","https://openalex.org/W6793712768","https://openalex.org/W6806421124"],"related_works":["https://openalex.org/W4200329650","https://openalex.org/W3127156785","https://openalex.org/W4205754011","https://openalex.org/W3009669391","https://openalex.org/W4205215807","https://openalex.org/W3005417802","https://openalex.org/W4226296940","https://openalex.org/W3028835529","https://openalex.org/W3036314732","https://openalex.org/W3134376730"],"abstract_inverted_index":{"Coronavirus":[0],"disease":[1],"2019":[2],"(COVID-19)":[3],"has":[4],"attracted":[5],"research":[6],"interests":[7],"from":[8],"all":[9],"fields.":[10],"Phylogenetic":[11],"and":[12,26,41,57,73,96,119,125],"social":[13,74],"network":[14,75,86,107,133],"analyses":[15,76],"based":[16],"on":[17,88],"connectivity":[18],"between":[19,28,47],"either":[20],"COVID-19":[21,80,137],"patients":[22],"or":[23],"geographic":[24],"regions":[25],"similarity":[27],"syndrome":[29],"coronavirus":[30],"2":[31],"(SARS-CoV-2)":[32],"sequences":[33],"provide":[34],"unique":[35],"angles":[36],"to":[37,114],"answer":[38],"public":[39],"health":[40],"pharmaco-biological":[42],"questions":[43],"such":[44,90],"as":[45,66,91,101,103],"relationships":[46],"various":[48],"SARS-CoV-2":[49,89],"mutants,":[50],"the":[51,58,121],"transmission":[52,117],"pathways":[53],"in":[54,79,83],"a":[55,67],"community":[56],"effectiveness":[59,122],"of":[60,70,123,132],"prevention":[61,124],"policies.":[62],"This":[63],"paper":[64],"serves":[65],"systematic":[68],"review":[69],"current":[71,84],"phylogenetic":[72,85],"with":[77,110],"applications":[78],"research.":[81],"Challenges":[82],"analysis":[87,108,134],"unreliable":[92],"inferences,":[93],"sampling":[94],"bias":[95],"batch":[97],"effects":[98],"are":[99,139],"discussed":[100],"well":[102],"potential":[104],"solutions.":[105],"Social":[106],"combined":[109],"epidemiology":[111],"models":[112],"helps":[113],"identify":[115],"key":[116],"characteristics":[118],"measure":[120],"control":[126],"strategies.":[127],"Finally,":[128],"future":[129],"new":[130],"directions":[131],"motivated":[135],"by":[136],"data":[138],"summarized.":[140]},"counts_by_year":[{"year":2026,"cited_by_count":1},{"year":2025,"cited_by_count":1},{"year":2024,"cited_by_count":3},{"year":2023,"cited_by_count":1},{"year":2022,"cited_by_count":2}],"updated_date":"2026-07-15T18:14:33.161393","created_date":"2025-10-10T00:00:00"}
