{"id":"https://openalex.org/W3198396834","doi":"https://doi.org/10.1093/bib/bbab350","title":"Minimal information for chemosensitivity assays (MICHA): a next-generation pipeline to enable the FAIRification of drug screening experiments","display_name":"Minimal information for chemosensitivity assays (MICHA): a next-generation pipeline to enable the FAIRification of drug screening experiments","publication_year":2021,"publication_date":"2021-08-09","ids":{"openalex":"https://openalex.org/W3198396834","doi":"https://doi.org/10.1093/bib/bbab350","mag":"3198396834","pmid":"https://pubmed.ncbi.nlm.nih.gov/34472587"},"language":"en","primary_location":{"id":"doi:10.1093/bib/bbab350","is_oa":true,"landing_page_url":"https://doi.org/10.1093/bib/bbab350","pdf_url":"https://academic.oup.com/bib/article-pdf/23/1/bbab350/42229873/bbab350.pdf","source":{"id":"https://openalex.org/S91767247","display_name":"Briefings in Bioinformatics","issn_l":"1467-5463","issn":["1467-5463","1477-4054"],"is_oa":false,"is_in_doaj":true,"is_core":true,"host_organization":"https://openalex.org/P4310311648","host_organization_name":"Oxford University Press","host_organization_lineage":["https://openalex.org/P4310311648","https://openalex.org/P4310311647"],"host_organization_lineage_names":["Oxford University Press","University of Oxford"],"type":"journal"},"license":"cc-by","license_id":"https://openalex.org/licenses/cc-by","version":"publishedVersion","is_accepted":true,"is_published":true,"raw_source_name":"Briefings in Bioinformatics","raw_type":"journal-article"},"type":"article","indexed_in":["crossref","doaj","pubmed"],"open_access":{"is_oa":true,"oa_status":"hybrid","oa_url":"https://academic.oup.com/bib/article-pdf/23/1/bbab350/42229873/bbab350.pdf","any_repository_has_fulltext":true},"authorships":[{"author_position":"first","author":{"id":"https://openalex.org/A5084617577","display_name":"Ziaurrehman Tanoli","orcid":"https://orcid.org/0000-0003-2435-9862"},"institutions":[{"id":"https://openalex.org/I133731052","display_name":"University of Helsinki","ror":"https://ror.org/040af2s02","country_code":"FI","type":"education","lineage":["https://openalex.org/I133731052"]}],"countries":["FI"],"is_corresponding":false,"raw_author_name":"Ziaurrehman Tanoli","raw_affiliation_strings":["Research Program in Systems Oncology, Faculty of medicine, University of Helsinki, Finland"],"raw_orcid":null,"affiliations":[{"raw_affiliation_string":"Research Program in Systems Oncology, Faculty of medicine, University of Helsinki, Finland","institution_ids":["https://openalex.org/I133731052"]}]},{"author_position":"middle","author":{"id":"https://openalex.org/A5026730333","display_name":"Jehad Aldahdooh","orcid":"https://orcid.org/0000-0002-9947-4067"},"institutions":[{"id":"https://openalex.org/I133731052","display_name":"University of Helsinki","ror":"https://ror.org/040af2s02","country_code":"FI","type":"education","lineage":["https://openalex.org/I133731052"]}],"countries":["FI"],"is_corresponding":false,"raw_author_name":"Jehad Aldahdooh","raw_affiliation_strings":["Research Program in Systems Oncology, Faculty of medicine, University of Helsinki, Finland"],"raw_orcid":null,"affiliations":[{"raw_affiliation_string":"Research Program in Systems Oncology, Faculty of medicine, University of Helsinki, Finland","institution_ids":["https://openalex.org/I133731052"]}]},{"author_position":"middle","author":{"id":"https://openalex.org/A5039295012","display_name":"Farhan Alam","orcid":"https://orcid.org/0009-0003-1089-4810"},"institutions":[{"id":"https://openalex.org/I133731052","display_name":"University of Helsinki","ror":"https://ror.org/040af2s02","country_code":"FI","type":"education","lineage":["https://openalex.org/I133731052"]}],"countries":["FI"],"is_corresponding":false,"raw_author_name":"Farhan Alam","raw_affiliation_strings":["Research Program in Systems Oncology, Faculty of medicine, University of Helsinki, Finland"],"raw_orcid":null,"affiliations":[{"raw_affiliation_string":"Research Program in Systems Oncology, Faculty of medicine, University of Helsinki, Finland","institution_ids":["https://openalex.org/I133731052"]}]},{"author_position":"middle","author":{"id":"https://openalex.org/A5025651686","display_name":"Yinyin Wang","orcid":"https://orcid.org/0000-0003-1285-0507"},"institutions":[{"id":"https://openalex.org/I133731052","display_name":"University of Helsinki","ror":"https://ror.org/040af2s02","country_code":"FI","type":"education","lineage":["https://openalex.org/I133731052"]}],"countries":["FI"],"is_corresponding":false,"raw_author_name":"Yinyin Wang","raw_affiliation_strings":["Research Program in Systems Oncology, Faculty of medicine, University of Helsinki, Finland"],"raw_orcid":null,"affiliations":[{"raw_affiliation_string":"Research Program in Systems Oncology, Faculty of medicine, University of Helsinki, Finland","institution_ids":["https://openalex.org/I133731052"]}]},{"author_position":"middle","author":{"id":"https://openalex.org/A5070759140","display_name":"Umair Seemab","orcid":null},"institutions":[{"id":"https://openalex.org/I133731052","display_name":"University of Helsinki","ror":"https://ror.org/040af2s02","country_code":"FI","type":"education","lineage":["https://openalex.org/I133731052"]}],"countries":["FI"],"is_corresponding":false,"raw_author_name":"Umair Seemab","raw_affiliation_strings":["Research Program in Systems Oncology, Faculty of medicine, University of Helsinki, Finland"],"raw_orcid":null,"affiliations":[{"raw_affiliation_string":"Research Program in Systems Oncology, Faculty of medicine, University of Helsinki, Finland","institution_ids":["https://openalex.org/I133731052"]}]},{"author_position":"middle","author":{"id":"https://openalex.org/A5039138842","display_name":"Maddalena Fratelli","orcid":"https://orcid.org/0000-0002-1769-3427"},"institutions":[{"id":"https://openalex.org/I4210153126","display_name":"Istituti di Ricovero e Cura a Carattere Scientifico","ror":"https://ror.org/04tfzc498","country_code":"IT","type":"healthcare","lineage":["https://openalex.org/I4210153126"]},{"id":"https://openalex.org/I19630809","display_name":"Mario Negri Institute for Pharmacological Research","ror":"https://ror.org/05aspc753","country_code":"IT","type":"nonprofit","lineage":["https://openalex.org/I19630809","https://openalex.org/I4210110338","https://openalex.org/I4210153126"]}],"countries":["IT"],"is_corresponding":false,"raw_author_name":"Maddalena Fratelli","raw_affiliation_strings":["Istituto di Ricerche Farmacologiche Mario Negri IRCCS, Italy"],"raw_orcid":null,"affiliations":[{"raw_affiliation_string":"Istituto di Ricerche Farmacologiche Mario Negri IRCCS, Italy","institution_ids":["https://openalex.org/I19630809","https://openalex.org/I4210153126"]}]},{"author_position":"middle","author":{"id":"https://openalex.org/A5021455739","display_name":"Petr Pavli\u0161","orcid":null},"institutions":[{"id":"https://openalex.org/I4210146721","display_name":"Institute of Molecular and Translational Medicine","ror":"https://ror.org/041e7q719","country_code":"CZ","type":"facility","lineage":["https://openalex.org/I4210146721"]}],"countries":["CZ"],"is_corresponding":false,"raw_author_name":"Petr Pavlis","raw_affiliation_strings":["Institute of Molecular and Translational Medicine, Czech"],"raw_orcid":null,"affiliations":[{"raw_affiliation_string":"Institute of Molecular and Translational Medicine, Czech","institution_ids":["https://openalex.org/I4210146721"]}]},{"author_position":"middle","author":{"id":"https://openalex.org/A5016827125","display_name":"Mari\u00e1n Hajd\u00fach","orcid":"https://orcid.org/0000-0002-4834-908X"},"institutions":[{"id":"https://openalex.org/I4210146721","display_name":"Institute of Molecular and Translational Medicine","ror":"https://ror.org/041e7q719","country_code":"CZ","type":"facility","lineage":["https://openalex.org/I4210146721"]}],"countries":["CZ"],"is_corresponding":false,"raw_author_name":"Marian Hajduch","raw_affiliation_strings":["Institute of Molecular and Translational Medicine, Czech"],"raw_orcid":null,"affiliations":[{"raw_affiliation_string":"Institute of Molecular and Translational Medicine, Czech","institution_ids":["https://openalex.org/I4210146721"]}]},{"author_position":"middle","author":{"id":"https://openalex.org/A5028865299","display_name":"Florence Bi\u00e9trix","orcid":"https://orcid.org/0000-0002-0499-9435"},"institutions":[],"countries":[],"is_corresponding":false,"raw_author_name":"Florence Bietrix","raw_affiliation_strings":["European Infrastructure for Translational Medicine, UK"],"raw_orcid":null,"affiliations":[{"raw_affiliation_string":"European Infrastructure for Translational Medicine, UK","institution_ids":[]}]},{"author_position":"middle","author":{"id":"https://openalex.org/A5052911277","display_name":"Philip Gribbon","orcid":"https://orcid.org/0000-0001-7655-2459"},"institutions":[{"id":"https://openalex.org/I4210134473","display_name":"Fraunhofer Institute for Molecular Biology and Applied Ecology","ror":"https://ror.org/03j85fc72","country_code":"DE","type":"facility","lineage":["https://openalex.org/I4210134473","https://openalex.org/I4923324"]}],"countries":["DE"],"is_corresponding":false,"raw_author_name":"Philip Gribbon","raw_affiliation_strings":["Fraunhofer Institute for Molecular Biology and Applied Ecology, Germany"],"raw_orcid":null,"affiliations":[{"raw_affiliation_string":"Fraunhofer Institute for Molecular Biology and Applied Ecology, Germany","institution_ids":["https://openalex.org/I4210134473"]}]},{"author_position":"middle","author":{"id":"https://openalex.org/A5028120868","display_name":"Andrea Zaliani","orcid":"https://orcid.org/0000-0002-1740-8390"},"institutions":[{"id":"https://openalex.org/I4210134473","display_name":"Fraunhofer Institute for Molecular Biology and Applied Ecology","ror":"https://ror.org/03j85fc72","country_code":"DE","type":"facility","lineage":["https://openalex.org/I4210134473","https://openalex.org/I4923324"]}],"countries":["DE"],"is_corresponding":false,"raw_author_name":"Andrea Zaliani","raw_affiliation_strings":["Fraunhofer Institute for Molecular Biology and Applied Ecology, Germany"],"raw_orcid":null,"affiliations":[{"raw_affiliation_string":"Fraunhofer Institute for Molecular Biology and Applied Ecology, Germany","institution_ids":["https://openalex.org/I4210134473"]}]},{"author_position":"middle","author":{"id":"https://openalex.org/A5022924056","display_name":"Matthew D. Hall","orcid":"https://orcid.org/0000-0002-5073-442X"},"institutions":[{"id":"https://openalex.org/I4210148682","display_name":"National Center for Advancing Translational Sciences","ror":"https://ror.org/04pw6fb54","country_code":"US","type":"government","lineage":["https://openalex.org/I1299022934","https://openalex.org/I1299303238","https://openalex.org/I4210148682"]}],"countries":["US"],"is_corresponding":false,"raw_author_name":"Matthew D Hall","raw_affiliation_strings":["National Center for Advancing Translational Sciences, USA"],"raw_orcid":null,"affiliations":[{"raw_affiliation_string":"National Center for Advancing Translational Sciences, USA","institution_ids":["https://openalex.org/I4210148682"]}]},{"author_position":"middle","author":{"id":"https://openalex.org/A5081154325","display_name":"Min Shen","orcid":"https://orcid.org/0000-0002-8218-0433"},"institutions":[{"id":"https://openalex.org/I4210148682","display_name":"National Center for Advancing Translational Sciences","ror":"https://ror.org/04pw6fb54","country_code":"US","type":"government","lineage":["https://openalex.org/I1299022934","https://openalex.org/I1299303238","https://openalex.org/I4210148682"]}],"countries":["US"],"is_corresponding":false,"raw_author_name":"Min Shen","raw_affiliation_strings":["National Center for Advancing Translational Sciences, USA"],"raw_orcid":null,"affiliations":[{"raw_affiliation_string":"National Center for Advancing Translational Sciences, USA","institution_ids":["https://openalex.org/I4210148682"]}]},{"author_position":"middle","author":{"id":"https://openalex.org/A5058662174","display_name":"Kyle R. Brimacombe","orcid":"https://orcid.org/0000-0002-9629-1417"},"institutions":[{"id":"https://openalex.org/I4210148682","display_name":"National Center for Advancing Translational Sciences","ror":"https://ror.org/04pw6fb54","country_code":"US","type":"government","lineage":["https://openalex.org/I1299022934","https://openalex.org/I1299303238","https://openalex.org/I4210148682"]}],"countries":["US"],"is_corresponding":false,"raw_author_name":"Kyle Brimacombe","raw_affiliation_strings":["National Center for Advancing Translational Sciences, USA"],"raw_orcid":null,"affiliations":[{"raw_affiliation_string":"National Center for Advancing Translational Sciences, USA","institution_ids":["https://openalex.org/I4210148682"]}]},{"author_position":"middle","author":{"id":"https://openalex.org/A5016772828","display_name":"Evgeny Kulesskiy","orcid":"https://orcid.org/0000-0001-5965-2917"},"institutions":[{"id":"https://openalex.org/I4210133586","display_name":"Institute for Molecular Medicine Finland","ror":"https://ror.org/030sbze61","country_code":"FI","type":"facility","lineage":["https://openalex.org/I133731052","https://openalex.org/I4210133586"]},{"id":"https://openalex.org/I4210107997","display_name":"Finland University","ror":"https://ror.org/014rks409","country_code":"FI","type":"education","lineage":["https://openalex.org/I4210107997"]},{"id":"https://openalex.org/I133731052","display_name":"University of Helsinki","ror":"https://ror.org/040af2s02","country_code":"FI","type":"education","lineage":["https://openalex.org/I133731052"]}],"countries":["FI"],"is_corresponding":false,"raw_author_name":"Evgeny Kulesskiy","raw_affiliation_strings":["Institute for Molecular Medicine Finland, University of Helsinki, Finland"],"raw_orcid":null,"affiliations":[{"raw_affiliation_string":"Institute for Molecular Medicine Finland, University of Helsinki, Finland","institution_ids":["https://openalex.org/I4210133586","https://openalex.org/I4210107997","https://openalex.org/I133731052"]}]},{"author_position":"middle","author":{"id":"https://openalex.org/A5062171296","display_name":"Jani Saarela","orcid":"https://orcid.org/0000-0001-7306-7175"},"institutions":[{"id":"https://openalex.org/I133731052","display_name":"University of Helsinki","ror":"https://ror.org/040af2s02","country_code":"FI","type":"education","lineage":["https://openalex.org/I133731052"]},{"id":"https://openalex.org/I4210133586","display_name":"Institute for Molecular Medicine Finland","ror":"https://ror.org/030sbze61","country_code":"FI","type":"facility","lineage":["https://openalex.org/I133731052","https://openalex.org/I4210133586"]},{"id":"https://openalex.org/I4210107997","display_name":"Finland University","ror":"https://ror.org/014rks409","country_code":"FI","type":"education","lineage":["https://openalex.org/I4210107997"]}],"countries":["FI"],"is_corresponding":false,"raw_author_name":"Jani Saarela","raw_affiliation_strings":["Institute for Molecular Medicine Finland, University of Helsinki, Finland"],"raw_orcid":null,"affiliations":[{"raw_affiliation_string":"Institute for Molecular Medicine Finland, University of Helsinki, Finland","institution_ids":["https://openalex.org/I4210133586","https://openalex.org/I4210107997","https://openalex.org/I133731052"]}]},{"author_position":"middle","author":{"id":"https://openalex.org/A5067760174","display_name":"Krister Wennerberg","orcid":"https://orcid.org/0000-0002-1352-4220"},"institutions":[{"id":"https://openalex.org/I124055696","display_name":"University of Copenhagen","ror":"https://ror.org/035b05819","country_code":"DK","type":"education","lineage":["https://openalex.org/I124055696"]}],"countries":["DK"],"is_corresponding":false,"raw_author_name":"Krister Wennerberg","raw_affiliation_strings":["Biotech Research & Innovation Centre (BRIC), University of Copenhagen, Denmark"],"raw_orcid":null,"affiliations":[{"raw_affiliation_string":"Biotech Research & Innovation Centre (BRIC), University of Copenhagen, Denmark","institution_ids":["https://openalex.org/I124055696"]}]},{"author_position":"middle","author":{"id":"https://openalex.org/A5025335008","display_name":"Markus V\u00e4h\u00e4\u2010Koskela","orcid":"https://orcid.org/0000-0001-7764-7820"},"institutions":[{"id":"https://openalex.org/I4210107997","display_name":"Finland University","ror":"https://ror.org/014rks409","country_code":"FI","type":"education","lineage":["https://openalex.org/I4210107997"]},{"id":"https://openalex.org/I4210133586","display_name":"Institute for Molecular Medicine Finland","ror":"https://ror.org/030sbze61","country_code":"FI","type":"facility","lineage":["https://openalex.org/I133731052","https://openalex.org/I4210133586"]},{"id":"https://openalex.org/I133731052","display_name":"University of Helsinki","ror":"https://ror.org/040af2s02","country_code":"FI","type":"education","lineage":["https://openalex.org/I133731052"]}],"countries":["FI"],"is_corresponding":false,"raw_author_name":"Markus V\u00e4h\u00e4-Koskela","raw_affiliation_strings":["Institute for Molecular Medicine Finland, University of Helsinki, Finland"],"raw_orcid":null,"affiliations":[{"raw_affiliation_string":"Institute for Molecular Medicine Finland, University of Helsinki, Finland","institution_ids":["https://openalex.org/I4210133586","https://openalex.org/I4210107997","https://openalex.org/I133731052"]}]},{"author_position":"last","author":{"id":"https://openalex.org/A5083397767","display_name":"Jing Tang","orcid":"https://orcid.org/0000-0001-7480-7710"},"institutions":[{"id":"https://openalex.org/I133731052","display_name":"University of Helsinki","ror":"https://ror.org/040af2s02","country_code":"FI","type":"education","lineage":["https://openalex.org/I133731052"]}],"countries":["FI"],"is_corresponding":true,"raw_author_name":"Jing Tang","raw_affiliation_strings":["Research Program in Systems Oncology, Faculty of medicine, University of Helsinki, Finland"],"raw_orcid":null,"affiliations":[{"raw_affiliation_string":"Research Program in Systems Oncology, Faculty of medicine, University of Helsinki, Finland","institution_ids":["https://openalex.org/I133731052"]}]}],"institutions":[],"countries_distinct_count":6,"institutions_distinct_count":19,"corresponding_author_ids":["https://openalex.org/A5083397767"],"corresponding_institution_ids":["https://openalex.org/I133731052"],"apc_list":{"value":4011,"currency":"USD","value_usd":4011},"apc_paid":{"value":4011,"currency":"USD","value_usd":4011},"fwci":2.1306,"has_fulltext":true,"cited_by_count":14,"citation_normalized_percentile":{"value":0.89134921,"is_in_top_1_percent":false,"is_in_top_10_percent":false},"cited_by_percentile_year":{"min":94,"max":99},"biblio":{"volume":"23","issue":"1","first_page":null,"last_page":null},"is_retracted":false,"is_paratext":false,"is_xpac":false,"primary_topic":{"id":"https://openalex.org/T10211","display_name":"Computational Drug Discovery Methods","score":0.9991999864578247,"subfield":{"id":"https://openalex.org/subfields/1703","display_name":"Computational Theory and Mathematics"},"field":{"id":"https://openalex.org/fields/17","display_name":"Computer Science"},"domain":{"id":"https://openalex.org/domains/3","display_name":"Physical Sciences"}},"topics":[{"id":"https://openalex.org/T10211","display_name":"Computational Drug Discovery Methods","score":0.9991999864578247,"subfield":{"id":"https://openalex.org/subfields/1703","display_name":"Computational Theory and Mathematics"},"field":{"id":"https://openalex.org/fields/17","display_name":"Computer Science"},"domain":{"id":"https://openalex.org/domains/3","display_name":"Physical Sciences"}},{"id":"https://openalex.org/T10887","display_name":"Bioinformatics and Genomic Networks","score":0.9965000152587891,"subfield":{"id":"https://openalex.org/subfields/1312","display_name":"Molecular Biology"},"field":{"id":"https://openalex.org/fields/13","display_name":"Biochemistry, Genetics and Molecular Biology"},"domain":{"id":"https://openalex.org/domains/1","display_name":"Life Sciences"}},{"id":"https://openalex.org/T12859","display_name":"Cell Image Analysis Techniques","score":0.9958000183105469,"subfield":{"id":"https://openalex.org/subfields/1304","display_name":"Biophysics"},"field":{"id":"https://openalex.org/fields/13","display_name":"Biochemistry, Genetics and Molecular Biology"},"domain":{"id":"https://openalex.org/domains/1","display_name":"Life Sciences"}}],"keywords":[{"id":"https://openalex.org/keywords/computer-science","display_name":"Computer science","score":0.7387982606887817},{"id":"https://openalex.org/keywords/annotation","display_name":"Annotation","score":0.6514893174171448},{"id":"https://openalex.org/keywords/pipeline","display_name":"Pipeline (software)","score":0.5885194540023804},{"id":"https://openalex.org/keywords/interoperability","display_name":"Interoperability","score":0.5474675893783569},{"id":"https://openalex.org/keywords/protocol","display_name":"Protocol (science)","score":0.47968578338623047},{"id":"https://openalex.org/keywords/drug-discovery","display_name":"Drug discovery","score":0.45861151814460754},{"id":"https://openalex.org/keywords/database","display_name":"Database","score":0.4142618775367737},{"id":"https://openalex.org/keywords/information-retrieval","display_name":"Information retrieval","score":0.33377185463905334},{"id":"https://openalex.org/keywords/world-wide-web","display_name":"World Wide Web","score":0.2744208574295044},{"id":"https://openalex.org/keywords/bioinformatics","display_name":"Bioinformatics","score":0.2309289276599884},{"id":"https://openalex.org/keywords/medicine","display_name":"Medicine","score":0.12998345494270325},{"id":"https://openalex.org/keywords/biology","display_name":"Biology","score":0.12730449438095093},{"id":"https://openalex.org/keywords/artificial-intelligence","display_name":"Artificial intelligence","score":0.08565464615821838}],"concepts":[{"id":"https://openalex.org/C41008148","wikidata":"https://www.wikidata.org/wiki/Q21198","display_name":"Computer science","level":0,"score":0.7387982606887817},{"id":"https://openalex.org/C2776321320","wikidata":"https://www.wikidata.org/wiki/Q857525","display_name":"Annotation","level":2,"score":0.6514893174171448},{"id":"https://openalex.org/C43521106","wikidata":"https://www.wikidata.org/wiki/Q2165493","display_name":"Pipeline (software)","level":2,"score":0.5885194540023804},{"id":"https://openalex.org/C20136886","wikidata":"https://www.wikidata.org/wiki/Q749647","display_name":"Interoperability","level":2,"score":0.5474675893783569},{"id":"https://openalex.org/C2780385302","wikidata":"https://www.wikidata.org/wiki/Q367158","display_name":"Protocol (science)","level":3,"score":0.47968578338623047},{"id":"https://openalex.org/C74187038","wikidata":"https://www.wikidata.org/wiki/Q1418791","display_name":"Drug discovery","level":2,"score":0.45861151814460754},{"id":"https://openalex.org/C77088390","wikidata":"https://www.wikidata.org/wiki/Q8513","display_name":"Database","level":1,"score":0.4142618775367737},{"id":"https://openalex.org/C23123220","wikidata":"https://www.wikidata.org/wiki/Q816826","display_name":"Information retrieval","level":1,"score":0.33377185463905334},{"id":"https://openalex.org/C136764020","wikidata":"https://www.wikidata.org/wiki/Q466","display_name":"World Wide Web","level":1,"score":0.2744208574295044},{"id":"https://openalex.org/C60644358","wikidata":"https://www.wikidata.org/wiki/Q128570","display_name":"Bioinformatics","level":1,"score":0.2309289276599884},{"id":"https://openalex.org/C71924100","wikidata":"https://www.wikidata.org/wiki/Q11190","display_name":"Medicine","level":0,"score":0.12998345494270325},{"id":"https://openalex.org/C86803240","wikidata":"https://www.wikidata.org/wiki/Q420","display_name":"Biology","level":0,"score":0.12730449438095093},{"id":"https://openalex.org/C154945302","wikidata":"https://www.wikidata.org/wiki/Q11660","display_name":"Artificial intelligence","level":1,"score":0.08565464615821838},{"id":"https://openalex.org/C142724271","wikidata":"https://www.wikidata.org/wiki/Q7208","display_name":"Pathology","level":1,"score":0.0},{"id":"https://openalex.org/C204787440","wikidata":"https://www.wikidata.org/wiki/Q188504","display_name":"Alternative medicine","level":2,"score":0.0},{"id":"https://openalex.org/C199360897","wikidata":"https://www.wikidata.org/wiki/Q9143","display_name":"Programming language","level":1,"score":0.0}],"mesh":[],"locations_count":6,"locations":[{"id":"doi:10.1093/bib/bbab350","is_oa":true,"landing_page_url":"https://doi.org/10.1093/bib/bbab350","pdf_url":"https://academic.oup.com/bib/article-pdf/23/1/bbab350/42229873/bbab350.pdf","source":{"id":"https://openalex.org/S91767247","display_name":"Briefings in Bioinformatics","issn_l":"1467-5463","issn":["1467-5463","1477-4054"],"is_oa":false,"is_in_doaj":true,"is_core":true,"host_organization":"https://openalex.org/P4310311648","host_organization_name":"Oxford University Press","host_organization_lineage":["https://openalex.org/P4310311648","https://openalex.org/P4310311647"],"host_organization_lineage_names":["Oxford University Press","University of Oxford"],"type":"journal"},"license":"cc-by","license_id":"https://openalex.org/licenses/cc-by","version":"publishedVersion","is_accepted":true,"is_published":true,"raw_source_name":"Briefings in Bioinformatics","raw_type":"journal-article"},{"id":"pmid:34472587","is_oa":false,"landing_page_url":"https://pubmed.ncbi.nlm.nih.gov/34472587","pdf_url":null,"source":{"id":"https://openalex.org/S4306525036","display_name":"PubMed","issn_l":null,"issn":null,"is_oa":false,"is_in_doaj":false,"is_core":false,"host_organization":"https://openalex.org/I1299303238","host_organization_name":"National Institutes of Health","host_organization_lineage":["https://openalex.org/I1299303238"],"host_organization_lineage_names":[],"type":"repository"},"license":null,"license_id":null,"version":"publishedVersion","is_accepted":true,"is_published":true,"raw_source_name":"Briefings in bioinformatics","raw_type":null},{"id":"pmh:oai:pure.atira.dk:openaire_cris_publications/84938378-f4c6-4984-aa3d-a0983178cf7d","is_oa":true,"landing_page_url":"https://researchprofiles.ku.dk/da/publications/84938378-f4c6-4984-aa3d-a0983178cf7d","pdf_url":"https://curis.ku.dk/ws/files/291992661/bbab350.pdf","source":{"id":"https://openalex.org/S4306401983","display_name":"Research at the University of Copenhagen (University of Copenhagen)","issn_l":null,"issn":null,"is_oa":false,"is_in_doaj":false,"is_core":false,"host_organization":"https://openalex.org/I124055696","host_organization_name":"University of Copenhagen","host_organization_lineage":["https://openalex.org/I124055696"],"host_organization_lineage_names":[],"type":"repository"},"license":"other-oa","license_id":"https://openalex.org/licenses/other-oa","version":"submittedVersion","is_accepted":false,"is_published":false,"raw_source_name":"Tanoli , Z , Aldahdooh , J , Alam , F , Wang , Y , Seemab , U , Fratelli , M , Pavlis , P , Hajduch , M , Bietrix , F , Gribbon , P , Zaliani , A , Hall , M D , Shen , M , Brimacombe , K , Kulesskiy , E , Saarela , J , Wennerberg , K , V\u00e4h\u00e4-Koskela , M & Tang , J 2022 , ' Minimal information for chemosensitivity assays (MICHA) : a next-generation pipeline to enable the FAIRification of drug screening experiments ' , Briefings in Bioinformatics , vol. 23 , no. 1 . https://doi.org/10.1093/bib/bbab350","raw_type":"article"},{"id":"pmh:oai:helda.helsinki.fi:10138/341843","is_oa":true,"landing_page_url":"http://hdl.handle.net/10138/341843","pdf_url":null,"source":{"id":"https://openalex.org/S4210213322","display_name":"Ty\u00f6v\u00e4entutkimus Vuosikirja","issn_l":"0784-1272","issn":["0784-1272","1459-7780"],"is_oa":true,"is_in_doaj":false,"is_core":false,"host_organization":null,"host_organization_name":null,"host_organization_lineage":[],"host_organization_lineage_names":[],"type":"journal"},"license":null,"license_id":null,"version":"submittedVersion","is_accepted":false,"is_published":false,"raw_source_name":"","raw_type":"Article"},{"id":"pmh:oai:publica.fraunhofer.de:publica/425441","is_oa":false,"landing_page_url":"https://publica.fraunhofer.de/handle/publica/425441","pdf_url":null,"source":{"id":"https://openalex.org/S4306400318","display_name":"Fraunhofer-Publica (Fraunhofer-Gesellschaft)","issn_l":null,"issn":null,"is_oa":false,"is_in_doaj":false,"is_core":false,"host_organization":"https://openalex.org/I4923324","host_organization_name":"Fraunhofer-Gesellschaft","host_organization_lineage":["https://openalex.org/I4923324"],"host_organization_lineage_names":[],"type":"repository"},"license":null,"license_id":null,"version":"submittedVersion","is_accepted":false,"is_published":false,"raw_source_name":null,"raw_type":"journal article"},{"id":"pmh:oai:pubmedcentral.nih.gov:8769689","is_oa":true,"landing_page_url":"https://www.ncbi.nlm.nih.gov/pmc/articles/8769689","pdf_url":null,"source":{"id":"https://openalex.org/S2764455111","display_name":"PubMed Central","issn_l":null,"issn":null,"is_oa":true,"is_in_doaj":false,"is_core":false,"host_organization":"https://openalex.org/I1299303238","host_organization_name":"National Institutes of Health","host_organization_lineage":["https://openalex.org/I1299303238"],"host_organization_lineage_names":[],"type":"repository"},"license":"cc-by","license_id":"https://openalex.org/licenses/cc-by","version":"submittedVersion","is_accepted":false,"is_published":false,"raw_source_name":"Brief Bioinform","raw_type":"Text"}],"best_oa_location":{"id":"doi:10.1093/bib/bbab350","is_oa":true,"landing_page_url":"https://doi.org/10.1093/bib/bbab350","pdf_url":"https://academic.oup.com/bib/article-pdf/23/1/bbab350/42229873/bbab350.pdf","source":{"id":"https://openalex.org/S91767247","display_name":"Briefings in Bioinformatics","issn_l":"1467-5463","issn":["1467-5463","1477-4054"],"is_oa":false,"is_in_doaj":true,"is_core":true,"host_organization":"https://openalex.org/P4310311648","host_organization_name":"Oxford University Press","host_organization_lineage":["https://openalex.org/P4310311648","https://openalex.org/P4310311647"],"host_organization_lineage_names":["Oxford University Press","University of Oxford"],"type":"journal"},"license":"cc-by","license_id":"https://openalex.org/licenses/cc-by","version":"publishedVersion","is_accepted":true,"is_published":true,"raw_source_name":"Briefings in Bioinformatics","raw_type":"journal-article"},"sustainable_development_goals":[{"score":0.550000011920929,"id":"https://metadata.un.org/sdg/3","display_name":"Good health and well-being"}],"awards":[{"id":"https://openalex.org/G1427963301","display_name":null,"funder_award_id":"317680","funder_id":"https://openalex.org/F4320321108","funder_display_name":"Academy of Finland"},{"id":"https://openalex.org/G2283403312","display_name":"Informatics approaches for the rational selection of personalized cancer drug combinations","funder_award_id":"716063","funder_id":"https://openalex.org/F4320320300","funder_display_name":"European Commission"},{"id":"https://openalex.org/G2496829247","display_name":null,"funder_award_id":"716063","funder_id":"https://openalex.org/F4320334678","funder_display_name":"European Research Council"},{"id":"https://openalex.org/G2687563341","display_name":null,"funder_award_id":"824087","funder_id":"https://openalex.org/F4320320300","funder_display_name":"European Commission"},{"id":"https://openalex.org/G5933564417","display_name":null,"funder_award_id":"824087","funder_id":"https://openalex.org/F4320319638","funder_display_name":"EOSC-Life"},{"id":"https://openalex.org/G7842005466","display_name":null,"funder_award_id":"Horizon 2020","funder_id":"https://openalex.org/F4320320300","funder_display_name":"European Commission"}],"funders":[{"id":"https://openalex.org/F4320319638","display_name":"EOSC-Life","ror":null},{"id":"https://openalex.org/F4320320300","display_name":"European Commission","ror":"https://ror.org/00k4n6c32"},{"id":"https://openalex.org/F4320321108","display_name":"Academy of Finland","ror":"https://ror.org/05k73zm37"},{"id":"https://openalex.org/F4320322725","display_name":"China Scholarship Council","ror":"https://ror.org/04atp4p48"},{"id":"https://openalex.org/F4320334678","display_name":"European Research Council","ror":"https://ror.org/0472cxd90"}],"has_content":{"grobid_xml":true,"pdf":true},"content_urls":{"pdf":"https://content.openalex.org/works/W3198396834.pdf","grobid_xml":"https://content.openalex.org/works/W3198396834.grobid-xml"},"referenced_works_count":38,"referenced_works":["https://openalex.org/W2008621428","https://openalex.org/W2043398720","https://openalex.org/W2045717408","https://openalex.org/W2050554833","https://openalex.org/W2107270715","https://openalex.org/W2133614244","https://openalex.org/W2170146596","https://openalex.org/W2175970000","https://openalex.org/W2202954603","https://openalex.org/W2204695023","https://openalex.org/W2407075689","https://openalex.org/W2461427403","https://openalex.org/W2558999090","https://openalex.org/W2562770483","https://openalex.org/W2744129621","https://openalex.org/W2766306821","https://openalex.org/W2767041448","https://openalex.org/W2777884179","https://openalex.org/W2805978167","https://openalex.org/W2808199968","https://openalex.org/W2890507936","https://openalex.org/W2900090807","https://openalex.org/W2922229918","https://openalex.org/W2954883822","https://openalex.org/W2981475131","https://openalex.org/W3003038853","https://openalex.org/W3006508031","https://openalex.org/W3010907970","https://openalex.org/W3014299867","https://openalex.org/W3022285953","https://openalex.org/W3023724901","https://openalex.org/W3033559278","https://openalex.org/W3047197438","https://openalex.org/W3049135230","https://openalex.org/W3049552342","https://openalex.org/W3130872060","https://openalex.org/W4210407906","https://openalex.org/W6779150602"],"related_works":["https://openalex.org/W2361861616","https://openalex.org/W2263699433","https://openalex.org/W2377979023","https://openalex.org/W2093262417","https://openalex.org/W2218034408","https://openalex.org/W2392921965","https://openalex.org/W4312626803","https://openalex.org/W2123131699","https://openalex.org/W2358755282","https://openalex.org/W650116260"],"abstract_inverted_index":{"Chemosensitivity":[0,41],"assays":[1,17],"are":[2,18,52],"commonly":[3],"used":[4],"for":[5,40],"preclinical":[6],"drug":[7,149,166,199],"discovery":[8],"and":[9,30,79,92,102,115,146,182],"clinical":[10],"trial":[11],"optimization.":[12],"However,":[13],"data":[14,57,81],"from":[15,48,56,162],"independent":[16],"often":[19,53],"discordant,":[20],"largely":[21],"attributed":[22],"to":[23,67,94,139,193],"uncharacterized":[24],"variation":[25],"in":[26],"the":[27,35,69,107,128,140,154,178,195],"experimental":[28],"materials":[29],"protocols.":[31],"We":[32],"report":[33,136],"here":[34],"launching":[36],"of":[37,109,148,156,189,198],"Minimal":[38],"Information":[39],"Assays":[42],"(MICHA),":[43],"accessed":[44],"via":[45],"https://micha-protocol.org.":[46],"Distinguished":[47],"existing":[49],"efforts":[50],"that":[51,137],"lacking":[54],"support":[55],"integration":[58],"tools,":[59],"MICHA":[60,86,132,179],"can":[61,118,133],"automatically":[62],"extract":[63],"publicly":[64],"available":[65],"information":[66],"facilitate":[68],"assay":[70,113],"annotation":[71,97,108,129],"including:":[72],"1)":[73],"compounds,":[74],"2)":[75],"samples,":[76,112],"3)":[77],"reagents":[78],"4)":[80],"processing":[82],"methods.":[83],"For":[84],"example,":[85],"provides":[87],"an":[88],"integrative":[89],"web":[90,180],"server":[91,181],"database":[93],"obtain":[95],"compound":[96],"including":[98],"chemical":[99],"structures,":[100],"targets":[101],"disease":[103],"indications.":[104],"In":[105],"addition,":[106],"cell":[110],"line":[111],"protocols":[114,161],"literature":[116],"references":[117],"be":[119],"greatly":[120],"eased":[121],"by":[122],"retrieving":[123],"manually":[124],"curated":[125],"catalogues.":[126],"Once":[127],"is":[130],"complete,":[131],"export":[134],"a":[135,186,190],"conforms":[138],"FAIR":[141],"principle":[142],"(Findable,":[143],"Accessible,":[144],"Interoperable":[145],"Reusable)":[147],"screening":[150,167],"studies.":[151,176],"To":[152],"consolidate":[153],"utility":[155],"MICHA,":[157],"we":[158,184],"provide":[159],"FAIRified":[160],"five":[163],"major":[164],"cancer":[165],"studies":[168],"as":[169,171],"well":[170],"six":[172],"recently":[173],"conducted":[174],"COVID-19":[175],"With":[177],"database,":[183],"envisage":[185],"wider":[187],"adoption":[188],"community-driven":[191],"effort":[192],"improve":[194],"open":[196],"access":[197],"sensitivity":[200],"assays.":[201]},"counts_by_year":[{"year":2026,"cited_by_count":2},{"year":2024,"cited_by_count":3},{"year":2023,"cited_by_count":3},{"year":2022,"cited_by_count":4},{"year":2021,"cited_by_count":2}],"updated_date":"2026-05-05T08:41:31.759640","created_date":"2025-10-10T00:00:00"}