{"id":"https://openalex.org/W3143548952","doi":"https://doi.org/10.1093/bib/bbab069","title":"Converting single nucleotide variants between genome builds: from cautionary tale to solution","display_name":"Converting single nucleotide variants between genome builds: from cautionary tale to solution","publication_year":2021,"publication_date":"2021-02-26","ids":{"openalex":"https://openalex.org/W3143548952","doi":"https://doi.org/10.1093/bib/bbab069","mag":"3143548952","pmid":"https://pubmed.ncbi.nlm.nih.gov/33822888"},"language":"en","primary_location":{"id":"doi:10.1093/bib/bbab069","is_oa":true,"landing_page_url":"https://doi.org/10.1093/bib/bbab069","pdf_url":"https://academic.oup.com/bib/article-pdf/22/5/bbab069/40260861/bbab069.pdf","source":{"id":"https://openalex.org/S91767247","display_name":"Briefings in Bioinformatics","issn_l":"1467-5463","issn":["1467-5463","1477-4054"],"is_oa":false,"is_in_doaj":true,"is_core":true,"host_organization":"https://openalex.org/P4310311648","host_organization_name":"Oxford University Press","host_organization_lineage":["https://openalex.org/P4310311648","https://openalex.org/P4310311647"],"host_organization_lineage_names":["Oxford University Press","University of Oxford"],"type":"journal"},"license":"cc-by","license_id":"https://openalex.org/licenses/cc-by","version":"publishedVersion","is_accepted":true,"is_published":true,"raw_source_name":"Briefings in Bioinformatics","raw_type":"journal-article"},"type":"article","indexed_in":["crossref","doaj","pubmed"],"open_access":{"is_oa":true,"oa_status":"hybrid","oa_url":"https://academic.oup.com/bib/article-pdf/22/5/bbab069/40260861/bbab069.pdf","any_repository_has_fulltext":true},"authorships":[{"author_position":"first","author":{"id":"https://openalex.org/A5016919891","display_name":"Cathal Ormond","orcid":"https://orcid.org/0000-0002-5717-0508"},"institutions":[{"id":"https://openalex.org/I205274468","display_name":"Trinity College Dublin","ror":"https://ror.org/02tyrky19","country_code":"IE","type":"education","lineage":["https://openalex.org/I205274468"]}],"countries":["IE"],"is_corresponding":false,"raw_author_name":"Cathal Ormond","raw_affiliation_strings":["Neuropsychiatric Genetics Research Group in the Department of Psychiatry, Trinity College Dublin, Ireland"],"raw_orcid":"https://orcid.org/0000-0002-5717-0508","affiliations":[{"raw_affiliation_string":"Neuropsychiatric Genetics Research Group in the Department of Psychiatry, Trinity College Dublin, Ireland","institution_ids":["https://openalex.org/I205274468"]}]},{"author_position":"middle","author":{"id":"https://openalex.org/A5057150770","display_name":"Niamh Ryan","orcid":"https://orcid.org/0000-0001-9773-2248"},"institutions":[{"id":"https://openalex.org/I205274468","display_name":"Trinity College Dublin","ror":"https://ror.org/02tyrky19","country_code":"IE","type":"education","lineage":["https://openalex.org/I205274468"]}],"countries":["IE"],"is_corresponding":false,"raw_author_name":"Niamh M Ryan","raw_affiliation_strings":["Neuropsychiatric Genetics Research Group in the Department of Psychiatry, Trinity College Dublin, Ireland"],"raw_orcid":"https://orcid.org/0000-0001-9773-2248","affiliations":[{"raw_affiliation_string":"Neuropsychiatric Genetics Research Group in the Department of Psychiatry, Trinity College Dublin, Ireland","institution_ids":["https://openalex.org/I205274468"]}]},{"author_position":"middle","author":{"id":"https://openalex.org/A5000611339","display_name":"Aiden Corvin","orcid":"https://orcid.org/0000-0001-6717-4089"},"institutions":[{"id":"https://openalex.org/I205274468","display_name":"Trinity College Dublin","ror":"https://ror.org/02tyrky19","country_code":"IE","type":"education","lineage":["https://openalex.org/I205274468"]}],"countries":["IE"],"is_corresponding":false,"raw_author_name":"Aiden Corvin","raw_affiliation_strings":["Neuropsychiatric Genetics Research Group and the Head of the Department of Psychiatry, Trinity College Dublin, Ireland"],"raw_orcid":"https://orcid.org/0000-0001-6717-4089","affiliations":[{"raw_affiliation_string":"Neuropsychiatric Genetics Research Group and the Head of the Department of Psychiatry, Trinity College Dublin, Ireland","institution_ids":["https://openalex.org/I205274468"]}]},{"author_position":"last","author":{"id":"https://openalex.org/A5027468371","display_name":"Elizabeth A. Heron","orcid":"https://orcid.org/0000-0003-2219-4005"},"institutions":[{"id":"https://openalex.org/I205274468","display_name":"Trinity College Dublin","ror":"https://ror.org/02tyrky19","country_code":"IE","type":"education","lineage":["https://openalex.org/I205274468"]}],"countries":["IE"],"is_corresponding":true,"raw_author_name":"Elizabeth A Heron","raw_affiliation_strings":["Neuropsychiatric Genetics Research Group in the Department of Psychiatry, Trinity College Dublin, Ireland"],"raw_orcid":"https://orcid.org/0000-0003-2219-4005","affiliations":[{"raw_affiliation_string":"Neuropsychiatric Genetics Research Group in the Department of Psychiatry, Trinity College Dublin, Ireland","institution_ids":["https://openalex.org/I205274468"]}]}],"institutions":[],"countries_distinct_count":1,"institutions_distinct_count":4,"corresponding_author_ids":["https://openalex.org/A5027468371"],"corresponding_institution_ids":["https://openalex.org/I205274468"],"apc_list":{"value":4011,"currency":"USD","value_usd":4011},"apc_paid":{"value":4011,"currency":"USD","value_usd":4011},"fwci":1.7916,"has_fulltext":false,"cited_by_count":31,"citation_normalized_percentile":{"value":0.85339137,"is_in_top_1_percent":false,"is_in_top_10_percent":false},"cited_by_percentile_year":{"min":97,"max":99},"biblio":{"volume":"22","issue":"5","first_page":null,"last_page":null},"is_retracted":false,"is_paratext":false,"is_xpac":false,"primary_topic":{"id":"https://openalex.org/T10015","display_name":"Genomics and Phylogenetic Studies","score":0.9998000264167786,"subfield":{"id":"https://openalex.org/subfields/1312","display_name":"Molecular Biology"},"field":{"id":"https://openalex.org/fields/13","display_name":"Biochemistry, Genetics and Molecular Biology"},"domain":{"id":"https://openalex.org/domains/1","display_name":"Life Sciences"}},"topics":[{"id":"https://openalex.org/T10015","display_name":"Genomics and Phylogenetic Studies","score":0.9998000264167786,"subfield":{"id":"https://openalex.org/subfields/1312","display_name":"Molecular Biology"},"field":{"id":"https://openalex.org/fields/13","display_name":"Biochemistry, Genetics and Molecular Biology"},"domain":{"id":"https://openalex.org/domains/1","display_name":"Life Sciences"}},{"id":"https://openalex.org/T10434","display_name":"Chromosomal and Genetic Variations","score":0.9980000257492065,"subfield":{"id":"https://openalex.org/subfields/1110","display_name":"Plant Science"},"field":{"id":"https://openalex.org/fields/11","display_name":"Agricultural and Biological Sciences"},"domain":{"id":"https://openalex.org/domains/1","display_name":"Life Sciences"}},{"id":"https://openalex.org/T11213","display_name":"Genomic variations and chromosomal abnormalities","score":0.9959999918937683,"subfield":{"id":"https://openalex.org/subfields/1311","display_name":"Genetics"},"field":{"id":"https://openalex.org/fields/13","display_name":"Biochemistry, Genetics and Molecular Biology"},"domain":{"id":"https://openalex.org/domains/1","display_name":"Life Sciences"}}],"keywords":[{"id":"https://openalex.org/keywords/computer-science","display_name":"Computer science","score":0.7204410433769226},{"id":"https://openalex.org/keywords/human-genome","display_name":"Human genome","score":0.6044999361038208},{"id":"https://openalex.org/keywords/reference-genome","display_name":"Reference genome","score":0.5905698537826538},{"id":"https://openalex.org/keywords/genome","display_name":"Genome","score":0.5583149790763855},{"id":"https://openalex.org/keywords/position","display_name":"Position (finance)","score":0.4771687090396881},{"id":"https://openalex.org/keywords/simple","display_name":"Simple (philosophy)","score":0.4549351632595062},{"id":"https://openalex.org/keywords/data-mining","display_name":"Data mining","score":0.4533039331436157},{"id":"https://openalex.org/keywords/dna-sequencing","display_name":"DNA sequencing","score":0.42257678508758545},{"id":"https://openalex.org/keywords/computational-biology","display_name":"Computational biology","score":0.3620772957801819},{"id":"https://openalex.org/keywords/algorithm","display_name":"Algorithm","score":0.35561931133270264},{"id":"https://openalex.org/keywords/biology","display_name":"Biology","score":0.16065698862075806},{"id":"https://openalex.org/keywords/genetics","display_name":"Genetics","score":0.14790770411491394},{"id":"https://openalex.org/keywords/dna","display_name":"DNA","score":0.1473650336265564},{"id":"https://openalex.org/keywords/gene","display_name":"Gene","score":0.09578657150268555}],"concepts":[{"id":"https://openalex.org/C41008148","wikidata":"https://www.wikidata.org/wiki/Q21198","display_name":"Computer science","level":0,"score":0.7204410433769226},{"id":"https://openalex.org/C197077220","wikidata":"https://www.wikidata.org/wiki/Q720988","display_name":"Human genome","level":4,"score":0.6044999361038208},{"id":"https://openalex.org/C192953774","wikidata":"https://www.wikidata.org/wiki/Q7307127","display_name":"Reference genome","level":4,"score":0.5905698537826538},{"id":"https://openalex.org/C141231307","wikidata":"https://www.wikidata.org/wiki/Q7020","display_name":"Genome","level":3,"score":0.5583149790763855},{"id":"https://openalex.org/C198082294","wikidata":"https://www.wikidata.org/wiki/Q3399648","display_name":"Position (finance)","level":2,"score":0.4771687090396881},{"id":"https://openalex.org/C2780586882","wikidata":"https://www.wikidata.org/wiki/Q7520643","display_name":"Simple (philosophy)","level":2,"score":0.4549351632595062},{"id":"https://openalex.org/C124101348","wikidata":"https://www.wikidata.org/wiki/Q172491","display_name":"Data mining","level":1,"score":0.4533039331436157},{"id":"https://openalex.org/C51679486","wikidata":"https://www.wikidata.org/wiki/Q380546","display_name":"DNA sequencing","level":3,"score":0.42257678508758545},{"id":"https://openalex.org/C70721500","wikidata":"https://www.wikidata.org/wiki/Q177005","display_name":"Computational biology","level":1,"score":0.3620772957801819},{"id":"https://openalex.org/C11413529","wikidata":"https://www.wikidata.org/wiki/Q8366","display_name":"Algorithm","level":1,"score":0.35561931133270264},{"id":"https://openalex.org/C86803240","wikidata":"https://www.wikidata.org/wiki/Q420","display_name":"Biology","level":0,"score":0.16065698862075806},{"id":"https://openalex.org/C54355233","wikidata":"https://www.wikidata.org/wiki/Q7162","display_name":"Genetics","level":1,"score":0.14790770411491394},{"id":"https://openalex.org/C552990157","wikidata":"https://www.wikidata.org/wiki/Q7430","display_name":"DNA","level":2,"score":0.1473650336265564},{"id":"https://openalex.org/C104317684","wikidata":"https://www.wikidata.org/wiki/Q7187","display_name":"Gene","level":2,"score":0.09578657150268555},{"id":"https://openalex.org/C162324750","wikidata":"https://www.wikidata.org/wiki/Q8134","display_name":"Economics","level":0,"score":0.0},{"id":"https://openalex.org/C10138342","wikidata":"https://www.wikidata.org/wiki/Q43015","display_name":"Finance","level":1,"score":0.0},{"id":"https://openalex.org/C138885662","wikidata":"https://www.wikidata.org/wiki/Q5891","display_name":"Philosophy","level":0,"score":0.0},{"id":"https://openalex.org/C111472728","wikidata":"https://www.wikidata.org/wiki/Q9471","display_name":"Epistemology","level":1,"score":0.0}],"mesh":[{"descriptor_ui":"D000073336","descriptor_name":"Whole Genome Sequencing","qualifier_ui":"Q000379","qualifier_name":"methods","is_major_topic":false},{"descriptor_ui":"D000073336","descriptor_name":"Whole Genome Sequencing","qualifier_ui":"Q000379","qualifier_name":"methods","is_major_topic":false},{"descriptor_ui":"D000073336","descriptor_name":"Whole Genome Sequencing","qualifier_ui":"Q000379","qualifier_name":"methods","is_major_topic":false},{"descriptor_ui":"D000465","descriptor_name":"Algorithms","qualifier_ui":null,"qualifier_name":null,"is_major_topic":true},{"descriptor_ui":"D000465","descriptor_name":"Algorithms","qualifier_ui":null,"qualifier_name":null,"is_major_topic":true},{"descriptor_ui":"D000465","descriptor_name":"Algorithms","qualifier_ui":null,"qualifier_name":null,"is_major_topic":true},{"descriptor_ui":"D005785","descriptor_name":"Gene Conversion","qualifier_ui":null,"qualifier_name":null,"is_major_topic":true},{"descriptor_ui":"D005785","descriptor_name":"Gene Conversion","qualifier_ui":null,"qualifier_name":null,"is_major_topic":true},{"descriptor_ui":"D005785","descriptor_name":"Gene Conversion","qualifier_ui":null,"qualifier_name":null,"is_major_topic":true},{"descriptor_ui":"D006801","descriptor_name":"Humans","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D006801","descriptor_name":"Humans","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D006801","descriptor_name":"Humans","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D015894","descriptor_name":"Genome, Human","qualifier_ui":null,"qualifier_name":null,"is_major_topic":true},{"descriptor_ui":"D015894","descriptor_name":"Genome, Human","qualifier_ui":null,"qualifier_name":null,"is_major_topic":true},{"descriptor_ui":"D015894","descriptor_name":"Genome, Human","qualifier_ui":null,"qualifier_name":null,"is_major_topic":true},{"descriptor_ui":"D016045","descriptor_name":"Human Genome Project","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D016045","descriptor_name":"Human Genome Project","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D016045","descriptor_name":"Human Genome Project","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D020641","descriptor_name":"Polymorphism, Single Nucleotide","qualifier_ui":null,"qualifier_name":null,"is_major_topic":true},{"descriptor_ui":"D020641","descriptor_name":"Polymorphism, Single Nucleotide","qualifier_ui":null,"qualifier_name":null,"is_major_topic":true},{"descriptor_ui":"D020641","descriptor_name":"Polymorphism, Single Nucleotide","qualifier_ui":null,"qualifier_name":null,"is_major_topic":true},{"descriptor_ui":"D059014","descriptor_name":"High-Throughput Nucleotide Sequencing","qualifier_ui":"Q000379","qualifier_name":"methods","is_major_topic":false},{"descriptor_ui":"D059014","descriptor_name":"High-Throughput Nucleotide Sequencing","qualifier_ui":"Q000379","qualifier_name":"methods","is_major_topic":false},{"descriptor_ui":"D059014","descriptor_name":"High-Throughput Nucleotide Sequencing","qualifier_ui":"Q000379","qualifier_name":"methods","is_major_topic":false},{"descriptor_ui":"D064878","descriptor_name":"Web Browser","qualifier_ui":null,"qualifier_name":null,"is_major_topic":true},{"descriptor_ui":"D064878","descriptor_name":"Web Browser","qualifier_ui":null,"qualifier_name":null,"is_major_topic":true},{"descriptor_ui":"D064878","descriptor_name":"Web Browser","qualifier_ui":null,"qualifier_name":null,"is_major_topic":true}],"locations_count":3,"locations":[{"id":"doi:10.1093/bib/bbab069","is_oa":true,"landing_page_url":"https://doi.org/10.1093/bib/bbab069","pdf_url":"https://academic.oup.com/bib/article-pdf/22/5/bbab069/40260861/bbab069.pdf","source":{"id":"https://openalex.org/S91767247","display_name":"Briefings in Bioinformatics","issn_l":"1467-5463","issn":["1467-5463","1477-4054"],"is_oa":false,"is_in_doaj":true,"is_core":true,"host_organization":"https://openalex.org/P4310311648","host_organization_name":"Oxford University Press","host_organization_lineage":["https://openalex.org/P4310311648","https://openalex.org/P4310311647"],"host_organization_lineage_names":["Oxford University Press","University of Oxford"],"type":"journal"},"license":"cc-by","license_id":"https://openalex.org/licenses/cc-by","version":"publishedVersion","is_accepted":true,"is_published":true,"raw_source_name":"Briefings in Bioinformatics","raw_type":"journal-article"},{"id":"pmid:33822888","is_oa":false,"landing_page_url":"https://pubmed.ncbi.nlm.nih.gov/33822888","pdf_url":null,"source":{"id":"https://openalex.org/S4306525036","display_name":"PubMed","issn_l":null,"issn":null,"is_oa":false,"is_in_doaj":false,"is_core":false,"host_organization":"https://openalex.org/I1299303238","host_organization_name":"National Institutes of Health","host_organization_lineage":["https://openalex.org/I1299303238"],"host_organization_lineage_names":[],"type":"repository"},"license":null,"license_id":null,"version":"publishedVersion","is_accepted":true,"is_published":true,"raw_source_name":"Briefings in bioinformatics","raw_type":null},{"id":"pmh:oai:pubmedcentral.nih.gov:8425424","is_oa":true,"landing_page_url":"https://www.ncbi.nlm.nih.gov/pmc/articles/8425424","pdf_url":null,"source":{"id":"https://openalex.org/S2764455111","display_name":"PubMed Central","issn_l":null,"issn":null,"is_oa":true,"is_in_doaj":false,"is_core":false,"host_organization":"https://openalex.org/I1299303238","host_organization_name":"National Institutes of Health","host_organization_lineage":["https://openalex.org/I1299303238"],"host_organization_lineage_names":[],"type":"repository"},"license":"cc-by","license_id":"https://openalex.org/licenses/cc-by","version":"publishedVersion","is_accepted":true,"is_published":true,"raw_source_name":"Brief Bioinform","raw_type":"Text"}],"best_oa_location":{"id":"doi:10.1093/bib/bbab069","is_oa":true,"landing_page_url":"https://doi.org/10.1093/bib/bbab069","pdf_url":"https://academic.oup.com/bib/article-pdf/22/5/bbab069/40260861/bbab069.pdf","source":{"id":"https://openalex.org/S91767247","display_name":"Briefings in Bioinformatics","issn_l":"1467-5463","issn":["1467-5463","1477-4054"],"is_oa":false,"is_in_doaj":true,"is_core":true,"host_organization":"https://openalex.org/P4310311648","host_organization_name":"Oxford University Press","host_organization_lineage":["https://openalex.org/P4310311648","https://openalex.org/P4310311647"],"host_organization_lineage_names":["Oxford University Press","University of Oxford"],"type":"journal"},"license":"cc-by","license_id":"https://openalex.org/licenses/cc-by","version":"publishedVersion","is_accepted":true,"is_published":true,"raw_source_name":"Briefings in Bioinformatics","raw_type":"journal-article"},"sustainable_development_goals":[{"display_name":"Industry, innovation and infrastructure","id":"https://metadata.un.org/sdg/9","score":0.5}],"awards":[{"id":"https://openalex.org/G1925026713","display_name":"Psychiatric Genomics Consortium: finding actionable variation","funder_award_id":"16/SPP/3324","funder_id":"https://openalex.org/F4320320847","funder_display_name":"Science Foundation Ireland"},{"id":"https://openalex.org/G4747827956","display_name":null,"funder_award_id":"R01 MH124875","funder_id":"https://openalex.org/F4320337346","funder_display_name":"National Institute of Mental Health"},{"id":"https://openalex.org/G5804923172","display_name":null,"funder_award_id":"U01 MH109499","funder_id":"https://openalex.org/F4320337346","funder_display_name":"National Institute of Mental Health"}],"funders":[{"id":"https://openalex.org/F4320320847","display_name":"Science Foundation Ireland","ror":"https://ror.org/0271asj38"},{"id":"https://openalex.org/F4320337346","display_name":"National Institute of Mental Health","ror":"https://ror.org/04xeg9z08"}],"has_content":{"grobid_xml":false,"pdf":false},"content_urls":null,"referenced_works_count":18,"referenced_works":["https://openalex.org/W2030443805","https://openalex.org/W2046137036","https://openalex.org/W2092138236","https://openalex.org/W2096525273","https://openalex.org/W2101071606","https://openalex.org/W2101412130","https://openalex.org/W2102619694","https://openalex.org/W2580314844","https://openalex.org/W2899616402","https://openalex.org/W2905452503","https://openalex.org/W2906926620","https://openalex.org/W2921879097","https://openalex.org/W2951529834","https://openalex.org/W2953263404","https://openalex.org/W3048203190","https://openalex.org/W4235761956","https://openalex.org/W4243601081","https://openalex.org/W6758076146"],"related_works":["https://openalex.org/W2921363728","https://openalex.org/W2279684808","https://openalex.org/W1969895229","https://openalex.org/W3217304749","https://openalex.org/W2894932706","https://openalex.org/W2066142713","https://openalex.org/W2108497208","https://openalex.org/W2767606877","https://openalex.org/W2133994800","https://openalex.org/W2289136766"],"abstract_inverted_index":{"Next-generation":[0],"sequencing":[1,104],"studies":[2],"are":[3,26,60,90,121,132,140,190],"dependent":[4],"on":[5],"a":[6,99,114,148,233],"high-quality":[7],"reference":[8,128],"genome":[9,25,127,229],"for":[10,166,236],"single":[11],"nucleotide":[12],"variant":[13],"(SNV)":[14],"calling.":[15],"Although":[16],"the":[17,23,40,71,136,143,161,169,198,207,219],"two":[18,170],"most":[19,41,171],"recent":[20],"builds":[21,174,230],"of":[22,73,135,150,163,202],"human":[24,126],"widely":[27],"used,":[28],"position":[29,43],"information":[30],"is":[31,48,98],"typically":[32],"not":[33,77],"directly":[34],"comparable":[35],"between":[36,125,168,228],"them.":[37],"Re-alignment":[38],"gives":[39,197],"accurate":[42],"information,":[44],"but":[45],"this":[46],"procedure":[47,196],"often":[49],"computationally":[50],"expensive,":[51],"and":[52,58,85,139,176,209,231,244],"therefore,":[53],"tools":[54,138],"such":[55],"as":[56,205],"liftOver":[57],"CrossMap":[59],"used":[61,173],"to":[62,68,92,117,156,184,192],"convert":[63],"data":[64],"from":[65,82,153],"one":[66,154],"build":[67,155],"another.":[69,157],"However,":[70],"positions":[72,119,131,152,165,243],"converted":[74,240],"SNVs":[75,80,89,179,188,204,227],"do":[76],"always":[78],"match":[79],"derived":[81],"aligned":[83],"data,":[84],"in":[86,187],"some":[87],"instances,":[88],"known":[91],"change":[93],"chromosome":[94],"when":[95,102,123,225],"converted.":[96],"This":[97,194,216],"significant":[100],"problem":[101],"compiling":[103],"resources":[105],"or":[106],"comparing":[107],"results":[108,186],"across":[109],"studies.":[110],"Here,":[111],"we":[112],"describe":[113],"novel":[115],"algorithm":[116,208,245],"identify":[118],"that":[120,189,221],"unstable":[122,164,214],"converting":[124,167,226],"builds.":[129],"These":[130],"detected":[133],"independent":[134],"conversion":[137],"determined":[141],"by":[142],"chain":[144],"files,":[145],"which":[146],"provide":[147,160],"mapping":[149],"contiguous":[151],"We":[158],"also":[159],"list":[162,201],"commonly":[172],"GRCh37":[175],"GRCh38.":[177],"Pre-excluding":[178],"at":[180,213,248],"these":[181],"positions,":[182],"prior":[183],"conversion,":[185],"stable":[191,203],"conversion.":[193],"simple":[195,234],"same":[199],"final":[200],"applying":[206],"subsequently":[210],"removing":[211],"variants":[212],"positions.":[215],"work":[217],"highlights":[218],"care":[220],"must":[222],"be":[223],"taken":[224],"provides":[232],"method":[235],"ensuring":[237],"higher":[238],"confidence":[239],"data.":[241],"Unstable":[242],"code,":[246],"available":[247],"https://github.com/cathaloruaidh/genomeBuildConversion.":[249]},"counts_by_year":[{"year":2026,"cited_by_count":2},{"year":2025,"cited_by_count":7},{"year":2024,"cited_by_count":11},{"year":2023,"cited_by_count":4},{"year":2022,"cited_by_count":7}],"updated_date":"2026-06-24T13:16:06.693445","created_date":"2025-10-10T00:00:00"}