{"id":"https://openalex.org/W3118810627","doi":"https://doi.org/10.1093/bib/bbaa404","title":"SARS-CoV-2 3D database: understanding the coronavirus proteome and evaluating possible drug targets","display_name":"SARS-CoV-2 3D database: understanding the coronavirus proteome and evaluating possible drug targets","publication_year":2020,"publication_date":"2020-12-28","ids":{"openalex":"https://openalex.org/W3118810627","doi":"https://doi.org/10.1093/bib/bbaa404","mag":"3118810627","pmid":"https://pubmed.ncbi.nlm.nih.gov/33416848"},"language":"en","primary_location":{"id":"doi:10.1093/bib/bbaa404","is_oa":true,"landing_page_url":"https://doi.org/10.1093/bib/bbaa404","pdf_url":"https://academic.oup.com/bib/article-pdf/22/2/769/36655605/bbaa404.pdf","source":{"id":"https://openalex.org/S91767247","display_name":"Briefings in Bioinformatics","issn_l":"1467-5463","issn":["1467-5463","1477-4054"],"is_oa":false,"is_in_doaj":true,"is_core":true,"host_organization":"https://openalex.org/P4310311648","host_organization_name":"Oxford University Press","host_organization_lineage":["https://openalex.org/P4310311648","https://openalex.org/P4310311647"],"host_organization_lineage_names":["Oxford University Press","University of Oxford"],"type":"journal"},"license":"cc-by","license_id":"https://openalex.org/licenses/cc-by","version":"publishedVersion","is_accepted":true,"is_published":true,"raw_source_name":"Briefings in Bioinformatics","raw_type":"journal-article"},"type":"article","indexed_in":["crossref","datacite","doaj","pubmed"],"open_access":{"is_oa":true,"oa_status":"hybrid","oa_url":"https://academic.oup.com/bib/article-pdf/22/2/769/36655605/bbaa404.pdf","any_repository_has_fulltext":true},"authorships":[{"author_position":"first","author":{"id":"https://openalex.org/A5029688139","display_name":"Ali F. Alsulami","orcid":"https://orcid.org/0000-0002-6696-7770"},"institutions":[{"id":"https://openalex.org/I241749","display_name":"University of Cambridge","ror":"https://ror.org/013meh722","country_code":"GB","type":"education","lineage":["https://openalex.org/I241749"]}],"countries":["GB"],"is_corresponding":false,"raw_author_name":"Ali F Alsulami","raw_affiliation_strings":["Department of Biochemistry, at the University of Cambridge, UK"],"affiliations":[{"raw_affiliation_string":"Department of Biochemistry, at the University of Cambridge, UK","institution_ids":["https://openalex.org/I241749"]}]},{"author_position":"middle","author":{"id":"https://openalex.org/A5083824953","display_name":"S.E. Thomas","orcid":"https://orcid.org/0000-0003-1152-4312"},"institutions":[{"id":"https://openalex.org/I241749","display_name":"University of Cambridge","ror":"https://ror.org/013meh722","country_code":"GB","type":"education","lineage":["https://openalex.org/I241749"]}],"countries":["GB"],"is_corresponding":false,"raw_author_name":"Sherine E Thomas","raw_affiliation_strings":["Department of Biochemistry, University of Cambridge, Cambridge, UK"],"affiliations":[{"raw_affiliation_string":"Department of Biochemistry, University of Cambridge, Cambridge, UK","institution_ids":["https://openalex.org/I241749"]}]},{"author_position":"middle","author":{"id":"https://openalex.org/A5011274100","display_name":"Arian R. Jamasb","orcid":"https://orcid.org/0000-0002-6727-7579"},"institutions":[{"id":"https://openalex.org/I241749","display_name":"University of Cambridge","ror":"https://ror.org/013meh722","country_code":"GB","type":"education","lineage":["https://openalex.org/I241749"]}],"countries":["GB"],"is_corresponding":false,"raw_author_name":"Arian R Jamasb","raw_affiliation_strings":["Department of Biochemistry, at the University of Cambridge, UK"],"affiliations":[{"raw_affiliation_string":"Department of Biochemistry, at the University of Cambridge, UK","institution_ids":["https://openalex.org/I241749"]}]},{"author_position":"middle","author":{"id":"https://openalex.org/A5070748938","display_name":"Christopher A. Beaudoin","orcid":"https://orcid.org/0000-0002-0232-0281"},"institutions":[{"id":"https://openalex.org/I241749","display_name":"University of Cambridge","ror":"https://ror.org/013meh722","country_code":"GB","type":"education","lineage":["https://openalex.org/I241749"]}],"countries":["GB"],"is_corresponding":false,"raw_author_name":"Christopher A Beaudoin","raw_affiliation_strings":["Department of Biochemistry, at the University of Cambridge, UK"],"affiliations":[{"raw_affiliation_string":"Department of Biochemistry, at the University of Cambridge, UK","institution_ids":["https://openalex.org/I241749"]}]},{"author_position":"middle","author":{"id":"https://openalex.org/A5042102084","display_name":"Ismail Moghul","orcid":"https://orcid.org/0000-0003-3653-2327"},"institutions":[{"id":"https://openalex.org/I4210147892","display_name":"CRUK Lung Cancer Centre of Excellence","ror":"https://ror.org/04nm2mq63","country_code":"GB","type":"facility","lineage":["https://openalex.org/I4210147892"]},{"id":"https://openalex.org/I45129253","display_name":"University College London","ror":"https://ror.org/02jx3x895","country_code":"GB","type":"education","lineage":["https://openalex.org/I124357947","https://openalex.org/I45129253"]}],"countries":["GB"],"is_corresponding":false,"raw_author_name":"Ismail Moghul","raw_affiliation_strings":["UCL Cancer Institute, University College London, UK"],"affiliations":[{"raw_affiliation_string":"UCL Cancer Institute, University College London, UK","institution_ids":["https://openalex.org/I4210147892","https://openalex.org/I45129253"]}]},{"author_position":"middle","author":{"id":"https://openalex.org/A5014552828","display_name":"Bridget P. Bannerman","orcid":"https://orcid.org/0000-0002-5746-8283"},"institutions":[{"id":"https://openalex.org/I241749","display_name":"University of Cambridge","ror":"https://ror.org/013meh722","country_code":"GB","type":"education","lineage":["https://openalex.org/I241749"]}],"countries":["GB"],"is_corresponding":false,"raw_author_name":"Bridget Bannerman","raw_affiliation_strings":["Department of Biochemistry, University of Cambridge, UK"],"affiliations":[{"raw_affiliation_string":"Department of Biochemistry, University of Cambridge, UK","institution_ids":["https://openalex.org/I241749"]}]},{"author_position":"middle","author":{"id":"https://openalex.org/A5003905510","display_name":"Liviu Copoiu","orcid":"https://orcid.org/0000-0001-9329-114X"},"institutions":[{"id":"https://openalex.org/I241749","display_name":"University of Cambridge","ror":"https://ror.org/013meh722","country_code":"GB","type":"education","lineage":["https://openalex.org/I241749"]}],"countries":["GB"],"is_corresponding":false,"raw_author_name":"Liviu Copoiu","raw_affiliation_strings":["Department of Biochemistry, at the University of Cambridge, UK"],"affiliations":[{"raw_affiliation_string":"Department of Biochemistry, at the University of Cambridge, UK","institution_ids":["https://openalex.org/I241749"]}]},{"author_position":"middle","author":{"id":"https://openalex.org/A5002259841","display_name":"Sundeep Chaitanya Vedithi","orcid":"https://orcid.org/0000-0003-3474-4705"},"institutions":[{"id":"https://openalex.org/I170203145","display_name":"MRC Laboratory of Molecular Biology","ror":"https://ror.org/00tw3jy02","country_code":"GB","type":"facility","lineage":["https://openalex.org/I170203145","https://openalex.org/I4210087105","https://openalex.org/I90344618"]},{"id":"https://openalex.org/I241749","display_name":"University of Cambridge","ror":"https://ror.org/013meh722","country_code":"GB","type":"education","lineage":["https://openalex.org/I241749"]}],"countries":["GB"],"is_corresponding":false,"raw_author_name":"Sundeep Chaitanya Vedithi","raw_affiliation_strings":["Molecular Immunity Unit, Department of Medicine University of Cambridge, MRC Laboratory of Molecular Biology, UK"],"affiliations":[{"raw_affiliation_string":"Molecular Immunity Unit, Department of Medicine University of Cambridge, MRC Laboratory of Molecular Biology, UK","institution_ids":["https://openalex.org/I170203145","https://openalex.org/I241749"]}]},{"author_position":"middle","author":{"id":"https://openalex.org/A5086333535","display_name":"Pedro Henrique Monteiro Torres","orcid":"https://orcid.org/0000-0002-0945-1495"},"institutions":[{"id":"https://openalex.org/I122140584","display_name":"Universidade Federal do Rio de Janeiro","ror":"https://ror.org/03490as77","country_code":"BR","type":"education","lineage":["https://openalex.org/I122140584"]}],"countries":["BR"],"is_corresponding":false,"raw_author_name":"Pedro Torres","raw_affiliation_strings":["Laborat\u00f3rio de Modelagem e Din\u00e2mica Molecular, Instituto de Biof\u00edsica Carlos Chagas Filho, Universidade Federal do Rio de Janeiro, Rio de Janeiro, RJ, Brasil"],"affiliations":[{"raw_affiliation_string":"Laborat\u00f3rio de Modelagem e Din\u00e2mica Molecular, Instituto de Biof\u00edsica Carlos Chagas Filho, Universidade Federal do Rio de Janeiro, Rio de Janeiro, RJ, Brasil","institution_ids":["https://openalex.org/I122140584"]}]},{"author_position":"last","author":{"id":"https://openalex.org/A5001029093","display_name":"Tom L. Blundell","orcid":"https://orcid.org/0000-0002-2708-8992"},"institutions":[{"id":"https://openalex.org/I241749","display_name":"University of Cambridge","ror":"https://ror.org/013meh722","country_code":"GB","type":"education","lineage":["https://openalex.org/I241749"]}],"countries":["GB"],"is_corresponding":true,"raw_author_name":"Tom L Blundell","raw_affiliation_strings":["Department of Biochemistry, University of Cambridge"],"affiliations":[{"raw_affiliation_string":"Department of Biochemistry, University of Cambridge","institution_ids":["https://openalex.org/I241749"]}]}],"institutions":[],"countries_distinct_count":2,"institutions_distinct_count":10,"corresponding_author_ids":["https://openalex.org/A5001029093"],"corresponding_institution_ids":["https://openalex.org/I241749"],"apc_list":{"value":4011,"currency":"USD","value_usd":4011},"apc_paid":{"value":4011,"currency":"USD","value_usd":4011},"fwci":0.8433,"has_fulltext":true,"cited_by_count":46,"citation_normalized_percentile":{"value":0.85058473,"is_in_top_1_percent":false,"is_in_top_10_percent":false},"cited_by_percentile_year":{"min":89,"max":100},"biblio":{"volume":"22","issue":"2","first_page":"769","last_page":"780"},"is_retracted":false,"is_paratext":false,"is_xpac":false,"primary_topic":{"id":"https://openalex.org/T10118","display_name":"SARS-CoV-2 and COVID-19 Research","score":0.9994000196456909,"subfield":{"id":"https://openalex.org/subfields/2725","display_name":"Infectious Diseases"},"field":{"id":"https://openalex.org/fields/27","display_name":"Medicine"},"domain":{"id":"https://openalex.org/domains/4","display_name":"Health Sciences"}},"topics":[{"id":"https://openalex.org/T10118","display_name":"SARS-CoV-2 and COVID-19 Research","score":0.9994000196456909,"subfield":{"id":"https://openalex.org/subfields/2725","display_name":"Infectious Diseases"},"field":{"id":"https://openalex.org/fields/27","display_name":"Medicine"},"domain":{"id":"https://openalex.org/domains/4","display_name":"Health Sciences"}},{"id":"https://openalex.org/T10211","display_name":"Computational Drug Discovery Methods","score":0.9977999925613403,"subfield":{"id":"https://openalex.org/subfields/1703","display_name":"Computational Theory and Mathematics"},"field":{"id":"https://openalex.org/fields/17","display_name":"Computer Science"},"domain":{"id":"https://openalex.org/domains/3","display_name":"Physical Sciences"}},{"id":"https://openalex.org/T12576","display_name":"vaccines and immunoinformatics approaches","score":0.9958000183105469,"subfield":{"id":"https://openalex.org/subfields/1312","display_name":"Molecular Biology"},"field":{"id":"https://openalex.org/fields/13","display_name":"Biochemistry, Genetics and Molecular Biology"},"domain":{"id":"https://openalex.org/domains/1","display_name":"Life Sciences"}}],"keywords":[{"id":"https://openalex.org/keywords/severe-acute-respiratory-syndrome-coronavirus-2","display_name":"Severe acute respiratory syndrome coronavirus 2 (SARS-CoV-2)","score":0.8189516663551331},{"id":"https://openalex.org/keywords/coronavirus-disease-2019","display_name":"Coronavirus disease 2019 (COVID-19)","score":0.7686339616775513},{"id":"https://openalex.org/keywords/2019-20-coronavirus-outbreak","display_name":"2019-20 coronavirus outbreak","score":0.7056822180747986},{"id":"https://openalex.org/keywords/coronavirus","display_name":"Coronavirus","score":0.6429967880249023},{"id":"https://openalex.org/keywords/proteome","display_name":"Proteome","score":0.6045336723327637},{"id":"https://openalex.org/keywords/virology","display_name":"Virology","score":0.5470815300941467},{"id":"https://openalex.org/keywords/betacoronavirus","display_name":"Betacoronavirus","score":0.4994795322418213},{"id":"https://openalex.org/keywords/drug","display_name":"Drug","score":0.49216145277023315},{"id":"https://openalex.org/keywords/computational-biology","display_name":"Computational biology","score":0.46989890933036804},{"id":"https://openalex.org/keywords/coronavirus-infections","display_name":"Coronavirus Infections","score":0.46734291315078735},{"id":"https://openalex.org/keywords/pandemic","display_name":"Pandemic","score":0.41598784923553467},{"id":"https://openalex.org/keywords/computer-science","display_name":"Computer science","score":0.33019524812698364},{"id":"https://openalex.org/keywords/medicine","display_name":"Medicine","score":0.27128905057907104},{"id":"https://openalex.org/keywords/biology","display_name":"Biology","score":0.2593366205692291},{"id":"https://openalex.org/keywords/bioinformatics","display_name":"Bioinformatics","score":0.20686587691307068},{"id":"https://openalex.org/keywords/infectious-disease","display_name":"Infectious disease (medical specialty)","score":0.09158197045326233},{"id":"https://openalex.org/keywords/pharmacology","display_name":"Pharmacology","score":0.09033316373825073}],"concepts":[{"id":"https://openalex.org/C3007834351","wikidata":"https://www.wikidata.org/wiki/Q82069695","display_name":"Severe acute respiratory syndrome coronavirus 2 (SARS-CoV-2)","level":5,"score":0.8189516663551331},{"id":"https://openalex.org/C3008058167","wikidata":"https://www.wikidata.org/wiki/Q84263196","display_name":"Coronavirus disease 2019 (COVID-19)","level":4,"score":0.7686339616775513},{"id":"https://openalex.org/C3006700255","wikidata":"https://www.wikidata.org/wiki/Q81068910","display_name":"2019-20 coronavirus outbreak","level":3,"score":0.7056822180747986},{"id":"https://openalex.org/C2777648638","wikidata":"https://www.wikidata.org/wiki/Q57751738","display_name":"Coronavirus","level":5,"score":0.6429967880249023},{"id":"https://openalex.org/C104397665","wikidata":"https://www.wikidata.org/wiki/Q860947","display_name":"Proteome","level":2,"score":0.6045336723327637},{"id":"https://openalex.org/C159047783","wikidata":"https://www.wikidata.org/wiki/Q7215","display_name":"Virology","level":1,"score":0.5470815300941467},{"id":"https://openalex.org/C2778137277","wikidata":"https://www.wikidata.org/wiki/Q16532287","display_name":"Betacoronavirus","level":5,"score":0.4994795322418213},{"id":"https://openalex.org/C2780035454","wikidata":"https://www.wikidata.org/wiki/Q8386","display_name":"Drug","level":2,"score":0.49216145277023315},{"id":"https://openalex.org/C70721500","wikidata":"https://www.wikidata.org/wiki/Q177005","display_name":"Computational biology","level":1,"score":0.46989890933036804},{"id":"https://openalex.org/C2909376813","wikidata":"https://www.wikidata.org/wiki/Q57751738","display_name":"Coronavirus Infections","level":5,"score":0.46734291315078735},{"id":"https://openalex.org/C89623803","wikidata":"https://www.wikidata.org/wiki/Q12184","display_name":"Pandemic","level":5,"score":0.41598784923553467},{"id":"https://openalex.org/C41008148","wikidata":"https://www.wikidata.org/wiki/Q21198","display_name":"Computer science","level":0,"score":0.33019524812698364},{"id":"https://openalex.org/C71924100","wikidata":"https://www.wikidata.org/wiki/Q11190","display_name":"Medicine","level":0,"score":0.27128905057907104},{"id":"https://openalex.org/C86803240","wikidata":"https://www.wikidata.org/wiki/Q420","display_name":"Biology","level":0,"score":0.2593366205692291},{"id":"https://openalex.org/C60644358","wikidata":"https://www.wikidata.org/wiki/Q128570","display_name":"Bioinformatics","level":1,"score":0.20686587691307068},{"id":"https://openalex.org/C524204448","wikidata":"https://www.wikidata.org/wiki/Q788926","display_name":"Infectious disease (medical specialty)","level":3,"score":0.09158197045326233},{"id":"https://openalex.org/C98274493","wikidata":"https://www.wikidata.org/wiki/Q128406","display_name":"Pharmacology","level":1,"score":0.09033316373825073},{"id":"https://openalex.org/C142724271","wikidata":"https://www.wikidata.org/wiki/Q7208","display_name":"Pathology","level":1,"score":0.0},{"id":"https://openalex.org/C116675565","wikidata":"https://www.wikidata.org/wiki/Q3241045","display_name":"Outbreak","level":2,"score":0.0},{"id":"https://openalex.org/C2779134260","wikidata":"https://www.wikidata.org/wiki/Q12136","display_name":"Disease","level":2,"score":0.0}],"mesh":[{"descriptor_ui":"D000086382","descriptor_name":"COVID-19","qualifier_ui":"Q000821","qualifier_name":"virology","is_major_topic":false},{"descriptor_ui":"D000086382","descriptor_name":"COVID-19","qualifier_ui":"Q000821","qualifier_name":"virology","is_major_topic":false},{"descriptor_ui":"D000086382","descriptor_name":"COVID-19","qualifier_ui":"Q000821","qualifier_name":"virology","is_major_topic":false},{"descriptor_ui":"D000086382","descriptor_name":"COVID-19","qualifier_ui":"Q000821","qualifier_name":"virology","is_major_topic":false},{"descriptor_ui":"D000086382","descriptor_name":"COVID-19","qualifier_ui":"Q000821","qualifier_name":"virology","is_major_topic":false},{"descriptor_ui":"D000086402","descriptor_name":"SARS-CoV-2","qualifier_ui":"Q000187","qualifier_name":"drug effects","is_major_topic":false},{"descriptor_ui":"D000086402","descriptor_name":"SARS-CoV-2","qualifier_ui":"Q000187","qualifier_name":"drug effects","is_major_topic":false},{"descriptor_ui":"D000086402","descriptor_name":"SARS-CoV-2","qualifier_ui":"Q000187","qualifier_name":"drug effects","is_major_topic":false},{"descriptor_ui":"D000086402","descriptor_name":"SARS-CoV-2","qualifier_ui":"Q000187","qualifier_name":"drug effects","is_major_topic":false},{"descriptor_ui":"D000086402","descriptor_name":"SARS-CoV-2","qualifier_ui":"Q000187","qualifier_name":"drug effects","is_major_topic":false},{"descriptor_ui":"D000086402","descriptor_name":"SARS-CoV-2","qualifier_ui":"Q000302","qualifier_name":"isolation & purification","is_major_topic":false},{"descriptor_ui":"D000086402","descriptor_name":"SARS-CoV-2","qualifier_ui":"Q000302","qualifier_name":"isolation & purification","is_major_topic":false},{"descriptor_ui":"D000086402","descriptor_name":"SARS-CoV-2","qualifier_ui":"Q000302","qualifier_name":"isolation & purification","is_major_topic":false},{"descriptor_ui":"D000086402","descriptor_name":"SARS-CoV-2","qualifier_ui":"Q000302","qualifier_name":"isolation & purification","is_major_topic":false},{"descriptor_ui":"D000086402","descriptor_name":"SARS-CoV-2","qualifier_ui":"Q000302","qualifier_name":"isolation & purification","is_major_topic":false},{"descriptor_ui":"D000998","descriptor_name":"Antiviral Agents","qualifier_ui":"Q000494","qualifier_name":"pharmacology","is_major_topic":false},{"descriptor_ui":"D000998","descriptor_name":"Antiviral Agents","qualifier_ui":"Q000494","qualifier_name":"pharmacology","is_major_topic":false},{"descriptor_ui":"D000998","descriptor_name":"Antiviral Agents","qualifier_ui":"Q000494","qualifier_name":"pharmacology","is_major_topic":false},{"descriptor_ui":"D000998","descriptor_name":"Antiviral Agents","qualifier_ui":"Q000494","qualifier_name":"pharmacology","is_major_topic":false},{"descriptor_ui":"D000998","descriptor_name":"Antiviral Agents","qualifier_ui":"Q000494","qualifier_name":"pharmacology","is_major_topic":false},{"descriptor_ui":"D006801","descriptor_name":"Humans","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D006801","descriptor_name":"Humans","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D006801","descriptor_name":"Humans","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D006801","descriptor_name":"Humans","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D006801","descriptor_name":"Humans","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D016503","descriptor_name":"Drug Delivery Systems","qualifier_ui":null,"qualifier_name":null,"is_major_topic":true},{"descriptor_ui":"D016503","descriptor_name":"Drug Delivery Systems","qualifier_ui":null,"qualifier_name":null,"is_major_topic":true},{"descriptor_ui":"D016503","descriptor_name":"Drug Delivery Systems","qualifier_ui":null,"qualifier_name":null,"is_major_topic":true},{"descriptor_ui":"D016503","descriptor_name":"Drug Delivery Systems","qualifier_ui":null,"qualifier_name":null,"is_major_topic":true},{"descriptor_ui":"D016503","descriptor_name":"Drug Delivery Systems","qualifier_ui":null,"qualifier_name":null,"is_major_topic":true},{"descriptor_ui":"D020543","descriptor_name":"Proteome","qualifier_ui":null,"qualifier_name":null,"is_major_topic":true},{"descriptor_ui":"D020543","descriptor_name":"Proteome","qualifier_ui":null,"qualifier_name":null,"is_major_topic":true},{"descriptor_ui":"D020543","descriptor_name":"Proteome","qualifier_ui":null,"qualifier_name":null,"is_major_topic":true},{"descriptor_ui":"D020543","descriptor_name":"Proteome","qualifier_ui":null,"qualifier_name":null,"is_major_topic":true},{"descriptor_ui":"D020543","descriptor_name":"Proteome","qualifier_ui":null,"qualifier_name":null,"is_major_topic":true},{"descriptor_ui":"D030562","descriptor_name":"Databases, Protein","qualifier_ui":null,"qualifier_name":null,"is_major_topic":true},{"descriptor_ui":"D030562","descriptor_name":"Databases, Protein","qualifier_ui":null,"qualifier_name":null,"is_major_topic":true},{"descriptor_ui":"D030562","descriptor_name":"Databases, Protein","qualifier_ui":null,"qualifier_name":null,"is_major_topic":true},{"descriptor_ui":"D030562","descriptor_name":"Databases, Protein","qualifier_ui":null,"qualifier_name":null,"is_major_topic":true},{"descriptor_ui":"D030562","descriptor_name":"Databases, Protein","qualifier_ui":null,"qualifier_name":null,"is_major_topic":true}],"locations_count":6,"locations":[{"id":"doi:10.1093/bib/bbaa404","is_oa":true,"landing_page_url":"https://doi.org/10.1093/bib/bbaa404","pdf_url":"https://academic.oup.com/bib/article-pdf/22/2/769/36655605/bbaa404.pdf","source":{"id":"https://openalex.org/S91767247","display_name":"Briefings in Bioinformatics","issn_l":"1467-5463","issn":["1467-5463","1477-4054"],"is_oa":false,"is_in_doaj":true,"is_core":true,"host_organization":"https://openalex.org/P4310311648","host_organization_name":"Oxford University Press","host_organization_lineage":["https://openalex.org/P4310311648","https://openalex.org/P4310311647"],"host_organization_lineage_names":["Oxford University Press","University of Oxford"],"type":"journal"},"license":"cc-by","license_id":"https://openalex.org/licenses/cc-by","version":"publishedVersion","is_accepted":true,"is_published":true,"raw_source_name":"Briefings in Bioinformatics","raw_type":"journal-article"},{"id":"pmid:33416848","is_oa":false,"landing_page_url":"https://pubmed.ncbi.nlm.nih.gov/33416848","pdf_url":null,"source":{"id":"https://openalex.org/S4306525036","display_name":"PubMed","issn_l":null,"issn":null,"is_oa":false,"is_in_doaj":false,"is_core":false,"host_organization":"https://openalex.org/I1299303238","host_organization_name":"National Institutes of Health","host_organization_lineage":["https://openalex.org/I1299303238"],"host_organization_lineage_names":[],"type":"repository"},"license":null,"license_id":null,"version":"publishedVersion","is_accepted":true,"is_published":true,"raw_source_name":"Briefings in bioinformatics","raw_type":null},{"id":"pmh:oai:eprints.ucl.ac.uk.OAI2:10126311","is_oa":false,"landing_page_url":"https://discovery.ucl.ac.uk/id/eprint/10126311/","pdf_url":null,"source":{"id":"https://openalex.org/S4306400024","display_name":"UCL Discovery (University College London)","issn_l":null,"issn":null,"is_oa":false,"is_in_doaj":false,"is_core":false,"host_organization":"https://openalex.org/I45129253","host_organization_name":"University College London","host_organization_lineage":["https://openalex.org/I45129253"],"host_organization_lineage_names":[],"type":"repository"},"license":null,"license_id":null,"version":"submittedVersion","is_accepted":false,"is_published":false,"raw_source_name":"   Briefings in Bioinformatics , 22  (2)   pp. 769-780.   (2021)      ","raw_type":"Article"},{"id":"pmh:oai:pubmedcentral.nih.gov:7929435","is_oa":true,"landing_page_url":"https://www.ncbi.nlm.nih.gov/pmc/articles/7929435","pdf_url":null,"source":{"id":"https://openalex.org/S2764455111","display_name":"PubMed Central","issn_l":null,"issn":null,"is_oa":false,"is_in_doaj":false,"is_core":false,"host_organization":"https://openalex.org/I1299303238","host_organization_name":"National Institutes of Health","host_organization_lineage":["https://openalex.org/I1299303238"],"host_organization_lineage_names":[],"type":"repository"},"license":"cc-by","license_id":"https://openalex.org/licenses/cc-by","version":"submittedVersion","is_accepted":false,"is_published":false,"raw_source_name":"Brief Bioinform","raw_type":"Text"},{"id":"pmh:oai:www.repository.cam.ac.uk:1810/315038","is_oa":false,"landing_page_url":"https://www.repository.cam.ac.uk/handle/1810/315038","pdf_url":null,"source":{"id":"https://openalex.org/S4306401777","display_name":"Apollo (University of Cambridge)","issn_l":null,"issn":null,"is_oa":false,"is_in_doaj":false,"is_core":false,"host_organization":"https://openalex.org/I241749","host_organization_name":"University of Cambridge","host_organization_lineage":["https://openalex.org/I241749"],"host_organization_lineage_names":[],"type":"repository"},"license":null,"license_id":null,"version":"submittedVersion","is_accepted":false,"is_published":false,"raw_source_name":null,"raw_type":"Article"},{"id":"doi:10.17863/cam.62145","is_oa":true,"landing_page_url":"https://doi.org/10.17863/cam.62145","pdf_url":null,"source":{"id":"https://openalex.org/S7407050737","display_name":"Apollo","issn_l":null,"issn":[],"is_oa":false,"is_in_doaj":false,"is_core":false,"host_organization":null,"host_organization_name":null,"host_organization_lineage":[],"host_organization_lineage_names":[],"type":"repository"},"license":null,"license_id":null,"version":null,"is_accepted":false,"is_published":null,"raw_source_name":null,"raw_type":"article-journal"}],"best_oa_location":{"id":"doi:10.1093/bib/bbaa404","is_oa":true,"landing_page_url":"https://doi.org/10.1093/bib/bbaa404","pdf_url":"https://academic.oup.com/bib/article-pdf/22/2/769/36655605/bbaa404.pdf","source":{"id":"https://openalex.org/S91767247","display_name":"Briefings in Bioinformatics","issn_l":"1467-5463","issn":["1467-5463","1477-4054"],"is_oa":false,"is_in_doaj":true,"is_core":true,"host_organization":"https://openalex.org/P4310311648","host_organization_name":"Oxford University Press","host_organization_lineage":["https://openalex.org/P4310311648","https://openalex.org/P4310311647"],"host_organization_lineage_names":["Oxford University Press","University of Oxford"],"type":"journal"},"license":"cc-by","license_id":"https://openalex.org/licenses/cc-by","version":"publishedVersion","is_accepted":true,"is_published":true,"raw_source_name":"Briefings in Bioinformatics","raw_type":"journal-article"},"sustainable_development_goals":[{"display_name":"Good health and well-being","score":0.8500000238418579,"id":"https://metadata.un.org/sdg/3"}],"awards":[{"id":"https://openalex.org/G1903400330","display_name":null,"funder_award_id":"RG83114","funder_id":"https://openalex.org/F4320311904","funder_display_name":"Wellcome Trust"},{"id":"https://openalex.org/G2475845854","display_name":null,"funder_award_id":"RG 70975","funder_id":"https://openalex.org/F4320320009","funder_display_name":"Cystic Fibrosis Trust"},{"id":"https://openalex.org/G387813240","display_name":null,"funder_award_id":"BB/M0","funder_id":"https://openalex.org/F4320334629","funder_display_name":"Biotechnology and Biological Sciences Research Council"},{"id":"https://openalex.org/G4454833240","display_name":null,"funder_award_id":"RG91317","funder_id":"https://openalex.org/F4320326958","funder_display_name":"Fondation Botnar"},{"id":"https://openalex.org/G5330140934","display_name":null,"funder_award_id":"BB/M011194","funder_id":"https://openalex.org/F4320334629","funder_display_name":"Biotechnology and Biological Sciences Research Council"},{"id":"https://openalex.org/G560731474","display_name":"Cambridge Doctoral Training Partnership - 2","funder_award_id":"BB/M011194/1","funder_id":"https://openalex.org/F4320334629","funder_display_name":"Biotechnology and Biological Sciences Research Council"},{"id":"https://openalex.org/G7093086574","display_name":null,"funder_award_id":"2016-2021","funder_id":"https://openalex.org/F4320311904","funder_display_name":"Wellcome Trust"},{"id":"https://openalex.org/G7392202181","display_name":null,"funder_award_id":"G88726","funder_id":"https://openalex.org/F4320316518","funder_display_name":"American Leprosy Missions"}],"funders":[{"id":"https://openalex.org/F4320311904","display_name":"Wellcome Trust","ror":"https://ror.org/029chgv08"},{"id":"https://openalex.org/F4320316518","display_name":"American Leprosy Missions","ror":"https://ror.org/01cpwsn91"},{"id":"https://openalex.org/F4320320009","display_name":"Cystic Fibrosis Trust","ror":"https://ror.org/03xeae684"},{"id":"https://openalex.org/F4320326958","display_name":"Fondation Botnar","ror":"https://ror.org/033ztm745"},{"id":"https://openalex.org/F4320328455","display_name":"Ipsen","ror":"https://ror.org/00d801g55"},{"id":"https://openalex.org/F4320332167","display_name":"Directorate for Biological Sciences","ror":"https://ror.org/001xhss06"},{"id":"https://openalex.org/F4320334629","display_name":"Biotechnology and Biological Sciences Research Council","ror":"https://ror.org/00cwqg982"}],"has_content":{"pdf":true,"grobid_xml":true},"content_urls":{"pdf":"https://content.openalex.org/works/W3118810627.pdf","grobid_xml":"https://content.openalex.org/works/W3118810627.grobid-xml"},"referenced_works_count":85,"referenced_works":["https://openalex.org/W1926675790","https://openalex.org/W1985588649","https://openalex.org/W1997487825","https://openalex.org/W2004228538","https://openalex.org/W2009299532","https://openalex.org/W2012505332","https://openalex.org/W2017380851","https://openalex.org/W2024405748","https://openalex.org/W2027408247","https://openalex.org/W2031168104","https://openalex.org/W2035503835","https://openalex.org/W2037312364","https://openalex.org/W2041476324","https://openalex.org/W2047544230","https://openalex.org/W2053275587","https://openalex.org/W2060197609","https://openalex.org/W2060809301","https://openalex.org/W2065283382","https://openalex.org/W2068070201","https://openalex.org/W2081719521","https://openalex.org/W2095719702","https://openalex.org/W2097775366","https://openalex.org/W2100574107","https://openalex.org/W2103459989","https://openalex.org/W2108226298","https://openalex.org/W2113927019","https://openalex.org/W2127322768","https://openalex.org/W2129089567","https://openalex.org/W2133416744","https://openalex.org/W2136513422","https://openalex.org/W2149949919","https://openalex.org/W2151920397","https://openalex.org/W2152279845","https://openalex.org/W2154714625","https://openalex.org/W2156095183","https://openalex.org/W2158714788","https://openalex.org/W2163761019","https://openalex.org/W2164690942","https://openalex.org/W2171291163","https://openalex.org/W2511687775","https://openalex.org/W2572080171","https://openalex.org/W2603119929","https://openalex.org/W2605343262","https://openalex.org/W2613081940","https://openalex.org/W2740908832","https://openalex.org/W2766768874","https://openalex.org/W2778062090","https://openalex.org/W2786209091","https://openalex.org/W2790079983","https://openalex.org/W2790185928","https://openalex.org/W2898789672","https://openalex.org/W2899664253","https://openalex.org/W2912783011","https://openalex.org/W2914171828","https://openalex.org/W2938574745","https://openalex.org/W2943222525","https://openalex.org/W2950428171","https://openalex.org/W2983485154","https://openalex.org/W2984761660","https://openalex.org/W2987031286","https://openalex.org/W2999044305","https://openalex.org/W3004280078","https://openalex.org/W3004318991","https://openalex.org/W3009109635","https://openalex.org/W3009335299","https://openalex.org/W3009912996","https://openalex.org/W3013058647","https://openalex.org/W3013213522","https://openalex.org/W3015429854","https://openalex.org/W3015608194","https://openalex.org/W3022285953","https://openalex.org/W3022435472","https://openalex.org/W3023475091","https://openalex.org/W3024835017","https://openalex.org/W3030680642","https://openalex.org/W3032355258","https://openalex.org/W3033737840","https://openalex.org/W3043427328","https://openalex.org/W3081155245","https://openalex.org/W3086633144","https://openalex.org/W3136918052","https://openalex.org/W4236459334","https://openalex.org/W6749231255","https://openalex.org/W6777558710","https://openalex.org/W6806115372"],"related_works":["https://openalex.org/W3031607536","https://openalex.org/W3015753260","https://openalex.org/W3005417802","https://openalex.org/W4206211383","https://openalex.org/W3006642361","https://openalex.org/W4220712676","https://openalex.org/W3009669391","https://openalex.org/W3003901880","https://openalex.org/W3004801973","https://openalex.org/W3111752274"],"abstract_inverted_index":{"The":[0],"severe":[1],"acute":[2],"respiratory":[3],"syndrome":[4],"coronavirus":[5],"2":[6],"(SARS-CoV-2)":[7],"is":[8],"a":[9,119],"rapidly":[10],"growing":[11],"infectious":[12],"disease,":[13],"widely":[14],"spread":[15],"with":[16,66,83,96],"high":[17],"mortality":[18],"rates.":[19],"Since":[20],"the":[21,24,47,51],"release":[22],"of":[23,46,50,68,78,85,100],"SARS-CoV-2":[25,93],"genome":[26],"sequence":[27],"in":[28,115],"March":[29],"2020,":[30],"there":[31,54],"has":[32,62],"been":[33],"an":[34],"international":[35],"focus":[36],"on":[37],"developing":[38],"target-based":[39],"drug":[40,132],"discovery,":[41,133],"which":[42],"also":[43],"requires":[44],"knowledge":[45],"3D":[48,64],"structure":[49],"proteome.":[52],"Where":[53],"are":[55,107,113],"no":[56],"experimentally":[57],"solved":[58,104],"structures,":[59],"our":[60],"group":[61],"created":[63],"models":[65],"coverage":[67],"97.5%":[69],"and":[70,80,87,102,121,138],"characterized":[71],"them":[72],"using":[73],"state-of-the-art":[74],"computational":[75],"approaches.":[76],"Models":[77],"protomers":[79],"oligomers,":[81],"together":[82],"predictions":[84],"substrate":[86],"allosteric":[88],"binding":[89],"sites,":[90],"protein-ligand":[91],"docking,":[92],"protein":[94],"interactions":[95],"human":[97],"proteins,":[98],"impacts":[99],"mutations,":[101],"mapped":[103],"experimental":[105],"structures":[106],"freely":[108],"available":[109,124],"for":[110,131],"download.":[111],"These":[112],"implemented":[114],"SARS":[116],"CoV-2":[117],"3D,":[118],"comprehensive":[120],"user-friendly":[122],"database,":[123],"at":[125],"https://sars3d.com/.":[126],"This":[127],"provides":[128],"essential":[129],"information":[130],"both":[134],"to":[135],"evaluate":[136],"targets":[137],"design":[139],"new":[140],"potential":[141],"therapeutics.":[142]},"counts_by_year":[{"year":2026,"cited_by_count":1},{"year":2025,"cited_by_count":2},{"year":2024,"cited_by_count":10},{"year":2023,"cited_by_count":3},{"year":2022,"cited_by_count":17},{"year":2021,"cited_by_count":12},{"year":2020,"cited_by_count":1}],"updated_date":"2026-04-10T15:06:20.359241","created_date":"2025-10-10T00:00:00"}
