{"id":"https://openalex.org/W3118879984","doi":"https://doi.org/10.1093/bib/bbaa386","title":"Bioinformatics resources for SARS-CoV-2 discovery and surveillance","display_name":"Bioinformatics resources for SARS-CoV-2 discovery and surveillance","publication_year":2020,"publication_date":"2020-11-30","ids":{"openalex":"https://openalex.org/W3118879984","doi":"https://doi.org/10.1093/bib/bbaa386","mag":"3118879984","pmid":"https://pubmed.ncbi.nlm.nih.gov/33416890"},"language":"en","primary_location":{"id":"doi:10.1093/bib/bbaa386","is_oa":true,"landing_page_url":"https://doi.org/10.1093/bib/bbaa386","pdf_url":"https://academic.oup.com/bib/article-pdf/22/2/631/36655618/bbaa386.pdf","source":{"id":"https://openalex.org/S91767247","display_name":"Briefings in Bioinformatics","issn_l":"1467-5463","issn":["1467-5463","1477-4054"],"is_oa":false,"is_in_doaj":true,"is_core":true,"host_organization":"https://openalex.org/P4310311648","host_organization_name":"Oxford University Press","host_organization_lineage":["https://openalex.org/P4310311648","https://openalex.org/P4310311647"],"host_organization_lineage_names":["Oxford University Press","University of Oxford"],"type":"journal"},"license":null,"license_id":null,"version":"publishedVersion","is_accepted":true,"is_published":true,"raw_source_name":"Briefings in Bioinformatics","raw_type":"journal-article"},"type":"article","indexed_in":["crossref","doaj","pubmed"],"open_access":{"is_oa":true,"oa_status":"bronze","oa_url":"https://academic.oup.com/bib/article-pdf/22/2/631/36655618/bbaa386.pdf","any_repository_has_fulltext":true},"authorships":[{"author_position":"first","author":{"id":"https://openalex.org/A5072645355","display_name":"Tao Hu","orcid":"https://orcid.org/0000-0002-1430-3112"},"institutions":[{"id":"https://openalex.org/I4210163399","display_name":"Shandong First Medical University","ror":"https://ror.org/05jb9pq57","country_code":"CN","type":"education","lineage":["https://openalex.org/I4210163399"]}],"countries":["CN"],"is_corresponding":false,"raw_author_name":"Tao Hu","raw_affiliation_strings":["Shandong First Medical University, China"],"raw_orcid":null,"affiliations":[{"raw_affiliation_string":"Shandong First Medical University, China","institution_ids":["https://openalex.org/I4210163399"]}]},{"author_position":"middle","author":{"id":"https://openalex.org/A5100421060","display_name":"Juan Li","orcid":"https://orcid.org/0000-0003-0905-7188"},"institutions":[{"id":"https://openalex.org/I4210163399","display_name":"Shandong First Medical University","ror":"https://ror.org/05jb9pq57","country_code":"CN","type":"education","lineage":["https://openalex.org/I4210163399"]}],"countries":["CN"],"is_corresponding":false,"raw_author_name":"Juan Li","raw_affiliation_strings":["Shandong First Medical University, China"],"raw_orcid":null,"affiliations":[{"raw_affiliation_string":"Shandong First Medical University, China","institution_ids":["https://openalex.org/I4210163399"]}]},{"author_position":"middle","author":{"id":"https://openalex.org/A5101505662","display_name":"Hong Zhou","orcid":"https://orcid.org/0000-0002-8164-0020"},"institutions":[{"id":"https://openalex.org/I4210163399","display_name":"Shandong First Medical University","ror":"https://ror.org/05jb9pq57","country_code":"CN","type":"education","lineage":["https://openalex.org/I4210163399"]}],"countries":["CN"],"is_corresponding":false,"raw_author_name":"Hong Zhou","raw_affiliation_strings":["Shandong First Medical University, China"],"raw_orcid":null,"affiliations":[{"raw_affiliation_string":"Shandong First Medical University, China","institution_ids":["https://openalex.org/I4210163399"]}]},{"author_position":"middle","author":{"id":"https://openalex.org/A5001451166","display_name":"Cixiu Li","orcid":"https://orcid.org/0000-0001-6911-9489"},"institutions":[{"id":"https://openalex.org/I4210163399","display_name":"Shandong First Medical University","ror":"https://ror.org/05jb9pq57","country_code":"CN","type":"education","lineage":["https://openalex.org/I4210163399"]}],"countries":["CN"],"is_corresponding":false,"raw_author_name":"Cixiu Li","raw_affiliation_strings":["Shandong First Medical University, China"],"raw_orcid":null,"affiliations":[{"raw_affiliation_string":"Shandong First Medical University, China","institution_ids":["https://openalex.org/I4210163399"]}]},{"author_position":"middle","author":{"id":"https://openalex.org/A5085736091","display_name":"Edward C. Holmes","orcid":"https://orcid.org/0000-0001-9596-3552"},"institutions":[{"id":"https://openalex.org/I129604602","display_name":"The University of Sydney","ror":"https://ror.org/0384j8v12","country_code":"AU","type":"education","lineage":["https://openalex.org/I129604602"]}],"countries":["AU"],"is_corresponding":false,"raw_author_name":"Edward C Holmes","raw_affiliation_strings":["University of Sydney, Australia"],"raw_orcid":null,"affiliations":[{"raw_affiliation_string":"University of Sydney, Australia","institution_ids":["https://openalex.org/I129604602"]}]},{"author_position":"last","author":{"id":"https://openalex.org/A5079289072","display_name":"Weifeng Shi","orcid":"https://orcid.org/0000-0002-8717-2942"},"institutions":[{"id":"https://openalex.org/I4210163399","display_name":"Shandong First Medical University","ror":"https://ror.org/05jb9pq57","country_code":"CN","type":"education","lineage":["https://openalex.org/I4210163399"]}],"countries":["CN"],"is_corresponding":true,"raw_author_name":"Weifeng Shi","raw_affiliation_strings":["Shandong First Medical University, China"],"raw_orcid":null,"affiliations":[{"raw_affiliation_string":"Shandong First Medical University, China","institution_ids":["https://openalex.org/I4210163399"]}]}],"institutions":[],"countries_distinct_count":2,"institutions_distinct_count":2,"corresponding_author_ids":["https://openalex.org/A5079289072"],"corresponding_institution_ids":["https://openalex.org/I4210163399"],"apc_list":{"value":4011,"currency":"USD","value_usd":4011},"apc_paid":null,"fwci":3.1326,"has_fulltext":false,"cited_by_count":59,"citation_normalized_percentile":{"value":0.93220019,"is_in_top_1_percent":false,"is_in_top_10_percent":true},"cited_by_percentile_year":{"min":94,"max":100},"biblio":{"volume":"22","issue":"2","first_page":"631","last_page":"641"},"is_retracted":false,"is_paratext":false,"is_xpac":false,"primary_topic":{"id":"https://openalex.org/T10015","display_name":"Genomics and Phylogenetic Studies","score":0.9973999857902527,"subfield":{"id":"https://openalex.org/subfields/1312","display_name":"Molecular Biology"},"field":{"id":"https://openalex.org/fields/13","display_name":"Biochemistry, Genetics and Molecular Biology"},"domain":{"id":"https://openalex.org/domains/1","display_name":"Life Sciences"}},"topics":[{"id":"https://openalex.org/T10015","display_name":"Genomics and Phylogenetic Studies","score":0.9973999857902527,"subfield":{"id":"https://openalex.org/subfields/1312","display_name":"Molecular Biology"},"field":{"id":"https://openalex.org/fields/13","display_name":"Biochemistry, Genetics and Molecular Biology"},"domain":{"id":"https://openalex.org/domains/1","display_name":"Life Sciences"}},{"id":"https://openalex.org/T11048","display_name":"Bacteriophages and microbial interactions","score":0.9944999814033508,"subfield":{"id":"https://openalex.org/subfields/2303","display_name":"Ecology"},"field":{"id":"https://openalex.org/fields/23","display_name":"Environmental Science"},"domain":{"id":"https://openalex.org/domains/3","display_name":"Physical Sciences"}},{"id":"https://openalex.org/T10118","display_name":"SARS-CoV-2 and COVID-19 Research","score":0.9940000176429749,"subfield":{"id":"https://openalex.org/subfields/2725","display_name":"Infectious Diseases"},"field":{"id":"https://openalex.org/fields/27","display_name":"Medicine"},"domain":{"id":"https://openalex.org/domains/4","display_name":"Health Sciences"}}],"keywords":[{"id":"https://openalex.org/keywords/pandemic","display_name":"Pandemic","score":0.6700000166893005},{"id":"https://openalex.org/keywords/severe-acute-respiratory-syndrome-coronavirus-2","display_name":"Severe acute respiratory syndrome coronavirus 2 (SARS-CoV-2)","score":0.6457480192184448},{"id":"https://openalex.org/keywords/coronavirus-disease-2019","display_name":"Coronavirus disease 2019 (COVID-19)","score":0.6371758580207825},{"id":"https://openalex.org/keywords/outbreak","display_name":"Outbreak","score":0.5761305093765259},{"id":"https://openalex.org/keywords/coronavirus","display_name":"Coronavirus","score":0.4587104916572571},{"id":"https://openalex.org/keywords/2019-20-coronavirus-outbreak","display_name":"2019-20 coronavirus outbreak","score":0.4579945206642151},{"id":"https://openalex.org/keywords/computational-biology","display_name":"Computational biology","score":0.44914913177490234},{"id":"https://openalex.org/keywords/data-science","display_name":"Data science","score":0.39926964044570923},{"id":"https://openalex.org/keywords/infectious-disease","display_name":"Infectious disease (medical specialty)","score":0.3958877623081207},{"id":"https://openalex.org/keywords/biology","display_name":"Biology","score":0.3541540205478668},{"id":"https://openalex.org/keywords/computer-science","display_name":"Computer science","score":0.345861554145813},{"id":"https://openalex.org/keywords/virology","display_name":"Virology","score":0.3416425585746765},{"id":"https://openalex.org/keywords/disease","display_name":"Disease","score":0.3416091203689575},{"id":"https://openalex.org/keywords/bioinformatics","display_name":"Bioinformatics","score":0.3299674987792969},{"id":"https://openalex.org/keywords/medicine","display_name":"Medicine","score":0.2546007037162781}],"concepts":[{"id":"https://openalex.org/C89623803","wikidata":"https://www.wikidata.org/wiki/Q12184","display_name":"Pandemic","level":5,"score":0.6700000166893005},{"id":"https://openalex.org/C3007834351","wikidata":"https://www.wikidata.org/wiki/Q82069695","display_name":"Severe acute respiratory syndrome coronavirus 2 (SARS-CoV-2)","level":5,"score":0.6457480192184448},{"id":"https://openalex.org/C3008058167","wikidata":"https://www.wikidata.org/wiki/Q84263196","display_name":"Coronavirus disease 2019 (COVID-19)","level":4,"score":0.6371758580207825},{"id":"https://openalex.org/C116675565","wikidata":"https://www.wikidata.org/wiki/Q3241045","display_name":"Outbreak","level":2,"score":0.5761305093765259},{"id":"https://openalex.org/C2777648638","wikidata":"https://www.wikidata.org/wiki/Q57751738","display_name":"Coronavirus","level":5,"score":0.4587104916572571},{"id":"https://openalex.org/C3006700255","wikidata":"https://www.wikidata.org/wiki/Q81068910","display_name":"2019-20 coronavirus outbreak","level":3,"score":0.4579945206642151},{"id":"https://openalex.org/C70721500","wikidata":"https://www.wikidata.org/wiki/Q177005","display_name":"Computational biology","level":1,"score":0.44914913177490234},{"id":"https://openalex.org/C2522767166","wikidata":"https://www.wikidata.org/wiki/Q2374463","display_name":"Data science","level":1,"score":0.39926964044570923},{"id":"https://openalex.org/C524204448","wikidata":"https://www.wikidata.org/wiki/Q788926","display_name":"Infectious disease (medical specialty)","level":3,"score":0.3958877623081207},{"id":"https://openalex.org/C86803240","wikidata":"https://www.wikidata.org/wiki/Q420","display_name":"Biology","level":0,"score":0.3541540205478668},{"id":"https://openalex.org/C41008148","wikidata":"https://www.wikidata.org/wiki/Q21198","display_name":"Computer science","level":0,"score":0.345861554145813},{"id":"https://openalex.org/C159047783","wikidata":"https://www.wikidata.org/wiki/Q7215","display_name":"Virology","level":1,"score":0.3416425585746765},{"id":"https://openalex.org/C2779134260","wikidata":"https://www.wikidata.org/wiki/Q12136","display_name":"Disease","level":2,"score":0.3416091203689575},{"id":"https://openalex.org/C60644358","wikidata":"https://www.wikidata.org/wiki/Q128570","display_name":"Bioinformatics","level":1,"score":0.3299674987792969},{"id":"https://openalex.org/C71924100","wikidata":"https://www.wikidata.org/wiki/Q11190","display_name":"Medicine","level":0,"score":0.2546007037162781},{"id":"https://openalex.org/C142724271","wikidata":"https://www.wikidata.org/wiki/Q7208","display_name":"Pathology","level":1,"score":0.0}],"mesh":[{"descriptor_ui":"D000086382","descriptor_name":"COVID-19","qualifier_ui":"Q000453","qualifier_name":"epidemiology","is_major_topic":false},{"descriptor_ui":"D000086382","descriptor_name":"COVID-19","qualifier_ui":"Q000453","qualifier_name":"epidemiology","is_major_topic":false},{"descriptor_ui":"D000086382","descriptor_name":"COVID-19","qualifier_ui":"Q000453","qualifier_name":"epidemiology","is_major_topic":false},{"descriptor_ui":"D000086382","descriptor_name":"COVID-19","qualifier_ui":"Q000453","qualifier_name":"epidemiology","is_major_topic":false},{"descriptor_ui":"D000086382","descriptor_name":"COVID-19","qualifier_ui":"Q000821","qualifier_name":"virology","is_major_topic":false},{"descriptor_ui":"D000086382","descriptor_name":"COVID-19","qualifier_ui":"Q000821","qualifier_name":"virology","is_major_topic":false},{"descriptor_ui":"D000086382","descriptor_name":"COVID-19","qualifier_ui":"Q000821","qualifier_name":"virology","is_major_topic":false},{"descriptor_ui":"D000086382","descriptor_name":"COVID-19","qualifier_ui":"Q000821","qualifier_name":"virology","is_major_topic":false},{"descriptor_ui":"D000086402","descriptor_name":"SARS-CoV-2","qualifier_ui":"Q000302","qualifier_name":"isolation & purification","is_major_topic":false},{"descriptor_ui":"D000086402","descriptor_name":"SARS-CoV-2","qualifier_ui":"Q000302","qualifier_name":"isolation & purification","is_major_topic":false},{"descriptor_ui":"D000086402","descriptor_name":"SARS-CoV-2","qualifier_ui":"Q000302","qualifier_name":"isolation & purification","is_major_topic":false},{"descriptor_ui":"D000086402","descriptor_name":"SARS-CoV-2","qualifier_ui":"Q000302","qualifier_name":"isolation & purification","is_major_topic":false},{"descriptor_ui":"D004196","descriptor_name":"Disease Outbreaks","qualifier_ui":"Q000517","qualifier_name":"prevention & control","is_major_topic":false},{"descriptor_ui":"D004196","descriptor_name":"Disease Outbreaks","qualifier_ui":"Q000517","qualifier_name":"prevention & control","is_major_topic":false},{"descriptor_ui":"D004196","descriptor_name":"Disease Outbreaks","qualifier_ui":"Q000517","qualifier_name":"prevention & control","is_major_topic":false},{"descriptor_ui":"D004196","descriptor_name":"Disease Outbreaks","qualifier_ui":"Q000517","qualifier_name":"prevention & control","is_major_topic":false},{"descriptor_ui":"D006801","descriptor_name":"Humans","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D006801","descriptor_name":"Humans","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D006801","descriptor_name":"Humans","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D006801","descriptor_name":"Humans","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D019295","descriptor_name":"Computational Biology","qualifier_ui":null,"qualifier_name":null,"is_major_topic":true},{"descriptor_ui":"D019295","descriptor_name":"Computational Biology","qualifier_ui":null,"qualifier_name":null,"is_major_topic":true},{"descriptor_ui":"D019295","descriptor_name":"Computational Biology","qualifier_ui":null,"qualifier_name":null,"is_major_topic":true},{"descriptor_ui":"D019295","descriptor_name":"Computational Biology","qualifier_ui":null,"qualifier_name":null,"is_major_topic":true},{"descriptor_ui":"D058873","descriptor_name":"Pandemics","qualifier_ui":"Q000517","qualifier_name":"prevention & control","is_major_topic":false},{"descriptor_ui":"D058873","descriptor_name":"Pandemics","qualifier_ui":"Q000517","qualifier_name":"prevention & control","is_major_topic":false},{"descriptor_ui":"D058873","descriptor_name":"Pandemics","qualifier_ui":"Q000517","qualifier_name":"prevention & control","is_major_topic":false},{"descriptor_ui":"D058873","descriptor_name":"Pandemics","qualifier_ui":"Q000517","qualifier_name":"prevention & control","is_major_topic":false},{"descriptor_ui":"D059014","descriptor_name":"High-Throughput Nucleotide Sequencing","qualifier_ui":"Q000379","qualifier_name":"methods","is_major_topic":false},{"descriptor_ui":"D059014","descriptor_name":"High-Throughput Nucleotide Sequencing","qualifier_ui":"Q000379","qualifier_name":"methods","is_major_topic":false},{"descriptor_ui":"D059014","descriptor_name":"High-Throughput Nucleotide Sequencing","qualifier_ui":"Q000379","qualifier_name":"methods","is_major_topic":false},{"descriptor_ui":"D059014","descriptor_name":"High-Throughput Nucleotide Sequencing","qualifier_ui":"Q000379","qualifier_name":"methods","is_major_topic":false}],"locations_count":4,"locations":[{"id":"doi:10.1093/bib/bbaa386","is_oa":true,"landing_page_url":"https://doi.org/10.1093/bib/bbaa386","pdf_url":"https://academic.oup.com/bib/article-pdf/22/2/631/36655618/bbaa386.pdf","source":{"id":"https://openalex.org/S91767247","display_name":"Briefings in Bioinformatics","issn_l":"1467-5463","issn":["1467-5463","1477-4054"],"is_oa":false,"is_in_doaj":true,"is_core":true,"host_organization":"https://openalex.org/P4310311648","host_organization_name":"Oxford University Press","host_organization_lineage":["https://openalex.org/P4310311648","https://openalex.org/P4310311647"],"host_organization_lineage_names":["Oxford University Press","University of Oxford"],"type":"journal"},"license":null,"license_id":null,"version":"publishedVersion","is_accepted":true,"is_published":true,"raw_source_name":"Briefings in Bioinformatics","raw_type":"journal-article"},{"id":"pmid:33416890","is_oa":false,"landing_page_url":"https://pubmed.ncbi.nlm.nih.gov/33416890","pdf_url":null,"source":{"id":"https://openalex.org/S4306525036","display_name":"PubMed","issn_l":null,"issn":null,"is_oa":false,"is_in_doaj":false,"is_core":false,"host_organization":"https://openalex.org/I1299303238","host_organization_name":"National Institutes of Health","host_organization_lineage":["https://openalex.org/I1299303238"],"host_organization_lineage_names":[],"type":"repository"},"license":null,"license_id":null,"version":"publishedVersion","is_accepted":true,"is_published":true,"raw_source_name":"Briefings in bioinformatics","raw_type":null},{"id":"pmh:oai:pubmedcentral.nih.gov:7929396","is_oa":true,"landing_page_url":"https://www.ncbi.nlm.nih.gov/pmc/articles/7929396","pdf_url":null,"source":{"id":"https://openalex.org/S2764455111","display_name":"PubMed Central","issn_l":null,"issn":null,"is_oa":true,"is_in_doaj":false,"is_core":false,"host_organization":"https://openalex.org/I1299303238","host_organization_name":"National Institutes of Health","host_organization_lineage":["https://openalex.org/I1299303238"],"host_organization_lineage_names":[],"type":"repository"},"license":null,"license_id":null,"version":"submittedVersion","is_accepted":false,"is_published":false,"raw_source_name":"Brief Bioinform","raw_type":"Text"},{"id":"pmh:oai:ses.library.usyd.edu.au:2123/24449","is_oa":false,"landing_page_url":"https://hdl.handle.net/2123/24449","pdf_url":null,"source":{"id":"https://openalex.org/S4306402414","display_name":"The Sydney eScholarship Repository (The University of Sydney)","issn_l":null,"issn":null,"is_oa":false,"is_in_doaj":false,"is_core":false,"host_organization":"https://openalex.org/I129604602","host_organization_name":"The University of Sydney","host_organization_lineage":["https://openalex.org/I129604602"],"host_organization_lineage_names":[],"type":"repository"},"license":null,"license_id":null,"version":"submittedVersion","is_accepted":false,"is_published":false,"raw_source_name":null,"raw_type":"Article"}],"best_oa_location":{"id":"doi:10.1093/bib/bbaa386","is_oa":true,"landing_page_url":"https://doi.org/10.1093/bib/bbaa386","pdf_url":"https://academic.oup.com/bib/article-pdf/22/2/631/36655618/bbaa386.pdf","source":{"id":"https://openalex.org/S91767247","display_name":"Briefings in Bioinformatics","issn_l":"1467-5463","issn":["1467-5463","1477-4054"],"is_oa":false,"is_in_doaj":true,"is_core":true,"host_organization":"https://openalex.org/P4310311648","host_organization_name":"Oxford University Press","host_organization_lineage":["https://openalex.org/P4310311648","https://openalex.org/P4310311647"],"host_organization_lineage_names":["Oxford University Press","University of Oxford"],"type":"journal"},"license":null,"license_id":null,"version":"publishedVersion","is_accepted":true,"is_published":true,"raw_source_name":"Briefings in Bioinformatics","raw_type":"journal-article"},"sustainable_development_goals":[{"id":"https://metadata.un.org/sdg/3","score":0.75,"display_name":"Good health and well-being"}],"awards":[],"funders":[],"has_content":{"grobid_xml":false,"pdf":false},"content_urls":null,"referenced_works_count":135,"referenced_works":["https://openalex.org/W128985141","https://openalex.org/W1483247593","https://openalex.org/W1803102843","https://openalex.org/W1971239653","https://openalex.org/W1971649883","https://openalex.org/W1984814148","https://openalex.org/W1996835973","https://openalex.org/W1997246534","https://openalex.org/W2007772656","https://openalex.org/W2010814032","https://openalex.org/W2013074398","https://openalex.org/W2021341670","https://openalex.org/W2026062398","https://openalex.org/W2027994915","https://openalex.org/W2036897871","https://openalex.org/W2037444377","https://openalex.org/W2045204781","https://openalex.org/W2063898400","https://openalex.org/W2097706568","https://openalex.org/W2100975785","https://openalex.org/W2102424972","https://openalex.org/W2103130355","https://openalex.org/W2103441770","https://openalex.org/W2104189207","https://openalex.org/W2104398544","https://openalex.org/W2106780559","https://openalex.org/W2106814707","https://openalex.org/W2106882534","https://openalex.org/W2107511706","https://openalex.org/W2107772251","https://openalex.org/W2110835349","https://openalex.org/W2111647009","https://openalex.org/W2112888168","https://openalex.org/W2113708808","https://openalex.org/W2119362018","https://openalex.org/W2120611093","https://openalex.org/W2120772351","https://openalex.org/W2120902911","https://openalex.org/W2124799197","https://openalex.org/W2126419817","https://openalex.org/W2127774996","https://openalex.org/W2128613007","https://openalex.org/W2131271579","https://openalex.org/W2132632499","https://openalex.org/W2132926880","https://openalex.org/W2140872496","https://openalex.org/W2141052558","https://openalex.org/W2142678478","https://openalex.org/W2144362290","https://openalex.org/W2144654387","https://openalex.org/W2146058063","https://openalex.org/W2146256775","https://openalex.org/W2155144061","https://openalex.org/W2159235552","https://openalex.org/W2162371815","https://openalex.org/W2163400707","https://openalex.org/W2163892779","https://openalex.org/W2167391272","https://openalex.org/W2170551349","https://openalex.org/W2170964688","https://openalex.org/W2171126517","https://openalex.org/W2194172909","https://openalex.org/W2303656007","https://openalex.org/W2306794997","https://openalex.org/W2322358787","https://openalex.org/W2409218178","https://openalex.org/W2466387107","https://openalex.org/W2516022550","https://openalex.org/W2518343196","https://openalex.org/W2530153241","https://openalex.org/W2559191318","https://openalex.org/W2559258718","https://openalex.org/W2598066557","https://openalex.org/W2605343262","https://openalex.org/W2616925143","https://openalex.org/W2763922522","https://openalex.org/W2774072836","https://openalex.org/W2776197744","https://openalex.org/W2789208418","https://openalex.org/W2789843538","https://openalex.org/W2794187484","https://openalex.org/W2799524357","https://openalex.org/W2804822363","https://openalex.org/W2889178232","https://openalex.org/W2898580681","https://openalex.org/W2898604559","https://openalex.org/W2907056575","https://openalex.org/W2927961455","https://openalex.org/W2944627925","https://openalex.org/W2946717857","https://openalex.org/W2949066112","https://openalex.org/W2949491511","https://openalex.org/W2949796709","https://openalex.org/W2950121474","https://openalex.org/W2950354111","https://openalex.org/W2951278111","https://openalex.org/W2951912016","https://openalex.org/W2952045272","https://openalex.org/W2964849163","https://openalex.org/W2969963553","https://openalex.org/W2979811825","https://openalex.org/W2990963479","https://openalex.org/W3001897055","https://openalex.org/W3003217347","https://openalex.org/W3004280078","https://openalex.org/W3004318991","https://openalex.org/W3006182053","https://openalex.org/W3010373510","https://openalex.org/W3013152614","https://openalex.org/W3013176417","https://openalex.org/W3017680297","https://openalex.org/W3022254624","https://openalex.org/W3023560309","https://openalex.org/W3025857586","https://openalex.org/W3026418408","https://openalex.org/W3034108314","https://openalex.org/W3036707773","https://openalex.org/W3040555232","https://openalex.org/W3040585768","https://openalex.org/W3043124965","https://openalex.org/W3045546916","https://openalex.org/W3046218112","https://openalex.org/W3194231319","https://openalex.org/W4205472948","https://openalex.org/W4247053599","https://openalex.org/W4252589030","https://openalex.org/W6629003624","https://openalex.org/W6643253698","https://openalex.org/W6674647444","https://openalex.org/W6714564524","https://openalex.org/W6757413714","https://openalex.org/W6773933412","https://openalex.org/W6774101627","https://openalex.org/W6779513036","https://openalex.org/W6912688539"],"related_works":["https://openalex.org/W4200329650","https://openalex.org/W3127156785","https://openalex.org/W3009669391","https://openalex.org/W4205215807","https://openalex.org/W3005417802","https://openalex.org/W3049446289","https://openalex.org/W3171943759","https://openalex.org/W4226296940","https://openalex.org/W3028835529","https://openalex.org/W3036314732"],"abstract_inverted_index":{"In":[0,27,61],"early":[1],"January":[2],"2020,":[3],"the":[4,66,71,80,108,113,124],"novel":[5],"coronavirus":[6],"(SARS-CoV-2)":[7],"responsible":[8],"for":[9,42,70],"a":[10,58],"pneumonia":[11],"outbreak":[12],"in":[13],"Wuhan,":[14],"China,":[15],"was":[16],"identified":[17],"using":[18],"next-generation":[19],"sequencing":[20],"(NGS)":[21],"and":[22,35,53,73,82,88,110],"readily":[23],"available":[24],"bioinformatics":[25,36,67,86],"pipelines.":[26],"addition":[28],"to":[29,99,107,119],"virus":[30],"discovery,":[31],"these":[32,85,100],"NGS":[33],"technologies":[34],"resources":[37,68,87],"are":[38,95],"currently":[39],"being":[40],"employed":[41],"ongoing":[43],"genomic":[44],"surveillance":[45,74],"of":[46,55,75,84,112,123],"SARS-CoV-2":[47],"worldwide,":[48],"tracking":[49],"its":[50],"spread,":[51],"evolution":[52],"patterns":[54],"variation":[56],"on":[57],"global":[59],"scale.":[60],"this":[62],"review,":[63],"we":[64],"summarize":[65],"used":[69],"discovery":[72],"SARS-CoV-2.":[76],"We":[77],"also":[78,118],"discuss":[79],"advantages":[81],"disadvantages":[83],"highlight":[89],"areas":[90],"where":[91],"additional":[92],"technical":[93],"developments":[94],"urgently":[96],"needed.":[97],"Solutions":[98],"problems":[101],"will":[102],"be":[103],"beneficial":[104],"not":[105],"only":[106],"prevention":[109],"control":[111],"current":[114],"COVID-19":[115],"pandemic":[116],"but":[117],"infectious":[120],"disease":[121],"outbreaks":[122],"future.":[125]},"counts_by_year":[{"year":2026,"cited_by_count":1},{"year":2025,"cited_by_count":3},{"year":2024,"cited_by_count":13},{"year":2023,"cited_by_count":13},{"year":2022,"cited_by_count":20},{"year":2021,"cited_by_count":9}],"updated_date":"2026-07-15T18:14:33.161393","created_date":"2025-10-10T00:00:00"}
