{"id":"https://openalex.org/W3117562192","doi":"https://doi.org/10.1093/bib/bbaa357","title":"Topological network measures for drug repositioning","display_name":"Topological network measures for drug repositioning","publication_year":2020,"publication_date":"2020-11-05","ids":{"openalex":"https://openalex.org/W3117562192","doi":"https://doi.org/10.1093/bib/bbaa357","mag":"3117562192","pmid":"https://pubmed.ncbi.nlm.nih.gov/33348366"},"language":"en","primary_location":{"id":"doi:10.1093/bib/bbaa357","is_oa":true,"landing_page_url":"https://doi.org/10.1093/bib/bbaa357","pdf_url":"https://academic.oup.com/bib/article-pdf/22/4/bbaa357/39149443/bbaa357.pdf","source":{"id":"https://openalex.org/S91767247","display_name":"Briefings in Bioinformatics","issn_l":"1467-5463","issn":["1467-5463","1477-4054"],"is_oa":false,"is_in_doaj":true,"is_core":true,"host_organization":"https://openalex.org/P4310311648","host_organization_name":"Oxford University Press","host_organization_lineage":["https://openalex.org/P4310311648","https://openalex.org/P4310311647"],"host_organization_lineage_names":["Oxford University Press","University of Oxford"],"type":"journal"},"license":"cc-by-nc","license_id":"https://openalex.org/licenses/cc-by-nc","version":"publishedVersion","is_accepted":true,"is_published":true,"raw_source_name":"Briefings in Bioinformatics","raw_type":"journal-article"},"type":"article","indexed_in":["crossref","doaj","pubmed"],"open_access":{"is_oa":true,"oa_status":"hybrid","oa_url":"https://academic.oup.com/bib/article-pdf/22/4/bbaa357/39149443/bbaa357.pdf","any_repository_has_fulltext":true},"authorships":[{"author_position":"first","author":{"id":"https://openalex.org/A5055035018","display_name":"Apurva Badkas","orcid":"https://orcid.org/0000-0002-4120-1963"},"institutions":[{"id":"https://openalex.org/I186903577","display_name":"University of Luxembourg","ror":"https://ror.org/036x5ad56","country_code":"LU","type":"education","lineage":["https://openalex.org/I186903577"]}],"countries":["LU"],"is_corresponding":false,"raw_author_name":"Apurva Badkas","raw_affiliation_strings":["University of Luxembourg"],"raw_orcid":"https://orcid.org/0000-0002-4120-1963","affiliations":[{"raw_affiliation_string":"University of Luxembourg","institution_ids":["https://openalex.org/I186903577"]}]},{"author_position":"middle","author":{"id":"https://openalex.org/A5082699450","display_name":"S\u00e9bastien De Landtsheer","orcid":"https://orcid.org/0000-0002-5421-2338"},"institutions":[{"id":"https://openalex.org/I186903577","display_name":"University of Luxembourg","ror":"https://ror.org/036x5ad56","country_code":"LU","type":"education","lineage":["https://openalex.org/I186903577"]}],"countries":["LU"],"is_corresponding":false,"raw_author_name":"S\u00e9bastien De Landtsheer","raw_affiliation_strings":["University of Luxembourg"],"raw_orcid":null,"affiliations":[{"raw_affiliation_string":"University of Luxembourg","institution_ids":["https://openalex.org/I186903577"]}]},{"author_position":"last","author":{"id":"https://openalex.org/A5050871083","display_name":"Thomas Sauter","orcid":"https://orcid.org/0000-0001-8225-2954"},"institutions":[{"id":"https://openalex.org/I186903577","display_name":"University of Luxembourg","ror":"https://ror.org/036x5ad56","country_code":"LU","type":"education","lineage":["https://openalex.org/I186903577"]}],"countries":["LU"],"is_corresponding":true,"raw_author_name":"Thomas Sauter","raw_affiliation_strings":["University of Luxembourg"],"raw_orcid":"https://orcid.org/0000-0001-8225-2954","affiliations":[{"raw_affiliation_string":"University of Luxembourg","institution_ids":["https://openalex.org/I186903577"]}]}],"institutions":[],"countries_distinct_count":1,"institutions_distinct_count":1,"corresponding_author_ids":["https://openalex.org/A5050871083"],"corresponding_institution_ids":["https://openalex.org/I186903577"],"apc_list":{"value":3885,"currency":"USD","value_usd":3885},"apc_paid":{"value":3885,"currency":"USD","value_usd":3885},"fwci":3.7689,"has_fulltext":false,"cited_by_count":63,"citation_normalized_percentile":{"value":0.94489075,"is_in_top_1_percent":false,"is_in_top_10_percent":true},"cited_by_percentile_year":{"min":93,"max":100},"biblio":{"volume":"22","issue":"4","first_page":null,"last_page":null},"is_retracted":false,"is_paratext":false,"is_xpac":false,"primary_topic":{"id":"https://openalex.org/T10211","display_name":"Computational Drug Discovery Methods","score":0.9995999932289124,"subfield":{"id":"https://openalex.org/subfields/1703","display_name":"Computational Theory and Mathematics"},"field":{"id":"https://openalex.org/fields/17","display_name":"Computer Science"},"domain":{"id":"https://openalex.org/domains/3","display_name":"Physical Sciences"}},"topics":[{"id":"https://openalex.org/T10211","display_name":"Computational Drug Discovery Methods","score":0.9995999932289124,"subfield":{"id":"https://openalex.org/subfields/1703","display_name":"Computational Theory and Mathematics"},"field":{"id":"https://openalex.org/fields/17","display_name":"Computer Science"},"domain":{"id":"https://openalex.org/domains/3","display_name":"Physical Sciences"}},{"id":"https://openalex.org/T10887","display_name":"Bioinformatics and Genomic Networks","score":0.996399998664856,"subfield":{"id":"https://openalex.org/subfields/1312","display_name":"Molecular Biology"},"field":{"id":"https://openalex.org/fields/13","display_name":"Biochemistry, Genetics and Molecular Biology"},"domain":{"id":"https://openalex.org/domains/1","display_name":"Life Sciences"}},{"id":"https://openalex.org/T10064","display_name":"Complex Network Analysis Techniques","score":0.9269999861717224,"subfield":{"id":"https://openalex.org/subfields/3109","display_name":"Statistical and Nonlinear Physics"},"field":{"id":"https://openalex.org/fields/31","display_name":"Physics and Astronomy"},"domain":{"id":"https://openalex.org/domains/3","display_name":"Physical Sciences"}}],"keywords":[{"id":"https://openalex.org/keywords/scope","display_name":"Scope (computer science)","score":0.8203604221343994},{"id":"https://openalex.org/keywords/drug-repositioning","display_name":"Drug repositioning","score":0.7771918773651123},{"id":"https://openalex.org/keywords/computer-science","display_name":"Computer science","score":0.6508329510688782},{"id":"https://openalex.org/keywords/key","display_name":"Key (lock)","score":0.5472785830497742},{"id":"https://openalex.org/keywords/data-science","display_name":"Data science","score":0.501986026763916},{"id":"https://openalex.org/keywords/artificial-intelligence","display_name":"Artificial intelligence","score":0.3828597664833069},{"id":"https://openalex.org/keywords/drug","display_name":"Drug","score":0.3791850805282593},{"id":"https://openalex.org/keywords/medicine","display_name":"Medicine","score":0.20676124095916748},{"id":"https://openalex.org/keywords/computer-security","display_name":"Computer security","score":0.13273102045059204},{"id":"https://openalex.org/keywords/psychiatry","display_name":"Psychiatry","score":0.08584633469581604}],"concepts":[{"id":"https://openalex.org/C2778012447","wikidata":"https://www.wikidata.org/wiki/Q1034415","display_name":"Scope (computer science)","level":2,"score":0.8203604221343994},{"id":"https://openalex.org/C103637391","wikidata":"https://www.wikidata.org/wiki/Q5308921","display_name":"Drug repositioning","level":3,"score":0.7771918773651123},{"id":"https://openalex.org/C41008148","wikidata":"https://www.wikidata.org/wiki/Q21198","display_name":"Computer science","level":0,"score":0.6508329510688782},{"id":"https://openalex.org/C26517878","wikidata":"https://www.wikidata.org/wiki/Q228039","display_name":"Key (lock)","level":2,"score":0.5472785830497742},{"id":"https://openalex.org/C2522767166","wikidata":"https://www.wikidata.org/wiki/Q2374463","display_name":"Data science","level":1,"score":0.501986026763916},{"id":"https://openalex.org/C154945302","wikidata":"https://www.wikidata.org/wiki/Q11660","display_name":"Artificial intelligence","level":1,"score":0.3828597664833069},{"id":"https://openalex.org/C2780035454","wikidata":"https://www.wikidata.org/wiki/Q8386","display_name":"Drug","level":2,"score":0.3791850805282593},{"id":"https://openalex.org/C71924100","wikidata":"https://www.wikidata.org/wiki/Q11190","display_name":"Medicine","level":0,"score":0.20676124095916748},{"id":"https://openalex.org/C38652104","wikidata":"https://www.wikidata.org/wiki/Q3510521","display_name":"Computer security","level":1,"score":0.13273102045059204},{"id":"https://openalex.org/C118552586","wikidata":"https://www.wikidata.org/wiki/Q7867","display_name":"Psychiatry","level":1,"score":0.08584633469581604},{"id":"https://openalex.org/C199360897","wikidata":"https://www.wikidata.org/wiki/Q9143","display_name":"Programming language","level":1,"score":0.0}],"mesh":[{"descriptor_ui":"D000069550","descriptor_name":"Machine Learning","qualifier_ui":null,"qualifier_name":null,"is_major_topic":true},{"descriptor_ui":"D000069550","descriptor_name":"Machine Learning","qualifier_ui":null,"qualifier_name":null,"is_major_topic":true},{"descriptor_ui":"D000069550","descriptor_name":"Machine Learning","qualifier_ui":null,"qualifier_name":null,"is_major_topic":true},{"descriptor_ui":"D000069550","descriptor_name":"Machine Learning","qualifier_ui":null,"qualifier_name":null,"is_major_topic":true},{"descriptor_ui":"D019295","descriptor_name":"Computational Biology","qualifier_ui":null,"qualifier_name":null,"is_major_topic":true},{"descriptor_ui":"D019295","descriptor_name":"Computational Biology","qualifier_ui":null,"qualifier_name":null,"is_major_topic":true},{"descriptor_ui":"D019295","descriptor_name":"Computational Biology","qualifier_ui":null,"qualifier_name":null,"is_major_topic":true},{"descriptor_ui":"D019295","descriptor_name":"Computational Biology","qualifier_ui":null,"qualifier_name":null,"is_major_topic":true},{"descriptor_ui":"D058492","descriptor_name":"Drug Repositioning","qualifier_ui":null,"qualifier_name":null,"is_major_topic":true},{"descriptor_ui":"D058492","descriptor_name":"Drug Repositioning","qualifier_ui":null,"qualifier_name":null,"is_major_topic":true},{"descriptor_ui":"D058492","descriptor_name":"Drug Repositioning","qualifier_ui":null,"qualifier_name":null,"is_major_topic":true},{"descriptor_ui":"D058492","descriptor_name":"Drug Repositioning","qualifier_ui":null,"qualifier_name":null,"is_major_topic":true}],"locations_count":4,"locations":[{"id":"doi:10.1093/bib/bbaa357","is_oa":true,"landing_page_url":"https://doi.org/10.1093/bib/bbaa357","pdf_url":"https://academic.oup.com/bib/article-pdf/22/4/bbaa357/39149443/bbaa357.pdf","source":{"id":"https://openalex.org/S91767247","display_name":"Briefings in Bioinformatics","issn_l":"1467-5463","issn":["1467-5463","1477-4054"],"is_oa":false,"is_in_doaj":true,"is_core":true,"host_organization":"https://openalex.org/P4310311648","host_organization_name":"Oxford University Press","host_organization_lineage":["https://openalex.org/P4310311648","https://openalex.org/P4310311647"],"host_organization_lineage_names":["Oxford University Press","University of Oxford"],"type":"journal"},"license":"cc-by-nc","license_id":"https://openalex.org/licenses/cc-by-nc","version":"publishedVersion","is_accepted":true,"is_published":true,"raw_source_name":"Briefings in Bioinformatics","raw_type":"journal-article"},{"id":"pmid:33348366","is_oa":false,"landing_page_url":"https://pubmed.ncbi.nlm.nih.gov/33348366","pdf_url":null,"source":{"id":"https://openalex.org/S4306525036","display_name":"PubMed","issn_l":null,"issn":null,"is_oa":false,"is_in_doaj":false,"is_core":false,"host_organization":"https://openalex.org/I1299303238","host_organization_name":"National Institutes of Health","host_organization_lineage":["https://openalex.org/I1299303238"],"host_organization_lineage_names":[],"type":"repository"},"license":null,"license_id":null,"version":"publishedVersion","is_accepted":true,"is_published":true,"raw_source_name":"Briefings in bioinformatics","raw_type":"Journal Article"},{"id":"pmh:oai:pubmedcentral.nih.gov:8294518","is_oa":true,"landing_page_url":"https://www.ncbi.nlm.nih.gov/pmc/articles/8294518","pdf_url":null,"source":{"id":"https://openalex.org/S2764455111","display_name":"PubMed Central","issn_l":null,"issn":null,"is_oa":true,"is_in_doaj":false,"is_core":false,"host_organization":"https://openalex.org/I1299303238","host_organization_name":"National Institutes of Health","host_organization_lineage":["https://openalex.org/I1299303238"],"host_organization_lineage_names":[],"type":"repository"},"license":"other-oa","license_id":"https://openalex.org/licenses/other-oa","version":"submittedVersion","is_accepted":false,"is_published":false,"raw_source_name":"Brief Bioinform","raw_type":"Text"},{"id":"pmh:oai:orbilu.uni.lu:10993/45677","is_oa":true,"landing_page_url":"https://orbilu.uni.lu/handle/10993/45677","pdf_url":null,"source":{"id":"https://openalex.org/S4306401815","display_name":"Open Repository and Bibliography (University of Luxembourg)","issn_l":null,"issn":null,"is_oa":false,"is_in_doaj":false,"is_core":false,"host_organization":"https://openalex.org/I186903577","host_organization_name":"University of Luxembourg","host_organization_lineage":["https://openalex.org/I186903577"],"host_organization_lineage_names":[],"type":"repository"},"license":"other-oa","license_id":"https://openalex.org/licenses/other-oa","version":"submittedVersion","is_accepted":false,"is_published":false,"raw_source_name":"Briefings in Bioinformatics (2020)","raw_type":"http://purl.org/coar/resource_type/c_6501"}],"best_oa_location":{"id":"doi:10.1093/bib/bbaa357","is_oa":true,"landing_page_url":"https://doi.org/10.1093/bib/bbaa357","pdf_url":"https://academic.oup.com/bib/article-pdf/22/4/bbaa357/39149443/bbaa357.pdf","source":{"id":"https://openalex.org/S91767247","display_name":"Briefings in Bioinformatics","issn_l":"1467-5463","issn":["1467-5463","1477-4054"],"is_oa":false,"is_in_doaj":true,"is_core":true,"host_organization":"https://openalex.org/P4310311648","host_organization_name":"Oxford University Press","host_organization_lineage":["https://openalex.org/P4310311648","https://openalex.org/P4310311647"],"host_organization_lineage_names":["Oxford University Press","University of Oxford"],"type":"journal"},"license":"cc-by-nc","license_id":"https://openalex.org/licenses/cc-by-nc","version":"publishedVersion","is_accepted":true,"is_published":true,"raw_source_name":"Briefings in Bioinformatics","raw_type":"journal-article"},"sustainable_development_goals":[{"score":0.6700000166893005,"id":"https://metadata.un.org/sdg/3","display_name":"Good health and well-being"}],"awards":[],"funders":[],"has_content":{"grobid_xml":false,"pdf":true},"content_urls":{"pdf":"https://content.openalex.org/works/W3117562192.pdf"},"referenced_works_count":119,"referenced_works":["https://openalex.org/W71660379","https://openalex.org/W95767997","https://openalex.org/W637153065","https://openalex.org/W1504533062","https://openalex.org/W1802476567","https://openalex.org/W1806432442","https://openalex.org/W1868158647","https://openalex.org/W1971052477","https://openalex.org/W1972729743","https://openalex.org/W1974003283","https://openalex.org/W1987730034","https://openalex.org/W1988183975","https://openalex.org/W1988428986","https://openalex.org/W1989058582","https://openalex.org/W2002915579","https://openalex.org/W2012746420","https://openalex.org/W2015789827","https://openalex.org/W2020817199","https://openalex.org/W2042901984","https://openalex.org/W2044960952","https://openalex.org/W2046810582","https://openalex.org/W2058867629","https://openalex.org/W2060173274","https://openalex.org/W2062776683","https://openalex.org/W2070704205","https://openalex.org/W2070722739","https://openalex.org/W2080754816","https://openalex.org/W2088320215","https://openalex.org/W2093540790","https://openalex.org/W2094791588","https://openalex.org/W2098318720","https://openalex.org/W2106474670","https://openalex.org/W2119692579","https://openalex.org/W2121376498","https://openalex.org/W2128054164","https://openalex.org/W2140239055","https://openalex.org/W2151357092","https://openalex.org/W2154897810","https://openalex.org/W2167822639","https://openalex.org/W2168764383","https://openalex.org/W2174011260","https://openalex.org/W2223126999","https://openalex.org/W2263739890","https://openalex.org/W2341986069","https://openalex.org/W2402674527","https://openalex.org/W2465131028","https://openalex.org/W2490926353","https://openalex.org/W2493614923","https://openalex.org/W2517185844","https://openalex.org/W2519842263","https://openalex.org/W2524827175","https://openalex.org/W2526541915","https://openalex.org/W2531470489","https://openalex.org/W2537623931","https://openalex.org/W2556436465","https://openalex.org/W2556519015","https://openalex.org/W2564258910","https://openalex.org/W2570065583","https://openalex.org/W2598265731","https://openalex.org/W2607497028","https://openalex.org/W2619948933","https://openalex.org/W2713273934","https://openalex.org/W2755669696","https://openalex.org/W2759241620","https://openalex.org/W2763573778","https://openalex.org/W2765203444","https://openalex.org/W2766208765","https://openalex.org/W2766376439","https://openalex.org/W2770849724","https://openalex.org/W2783204748","https://openalex.org/W2786016794","https://openalex.org/W2791331713","https://openalex.org/W2793742848","https://openalex.org/W2800595743","https://openalex.org/W2803095812","https://openalex.org/W2824512807","https://openalex.org/W2826750344","https://openalex.org/W2837999301","https://openalex.org/W2885447570","https://openalex.org/W2887766329","https://openalex.org/W2887932365","https://openalex.org/W2894669132","https://openalex.org/W2896002881","https://openalex.org/W2897878251","https://openalex.org/W2900960361","https://openalex.org/W2912336508","https://openalex.org/W2945183595","https://openalex.org/W2949435632","https://openalex.org/W2951561317","https://openalex.org/W2952849701","https://openalex.org/W2959798450","https://openalex.org/W2963120510","https://openalex.org/W2963703678","https://openalex.org/W2964010735","https://openalex.org/W2971570971","https://openalex.org/W2974666668","https://openalex.org/W2985146206","https://openalex.org/W2990468929","https://openalex.org/W2998119497","https://openalex.org/W2998922495","https://openalex.org/W3011072970","https://openalex.org/W3023915741","https://openalex.org/W3036634556","https://openalex.org/W3040062994","https://openalex.org/W3059955640","https://openalex.org/W3085126519","https://openalex.org/W3088680691","https://openalex.org/W3089299640","https://openalex.org/W3121726713","https://openalex.org/W4306696320","https://openalex.org/W6602995268","https://openalex.org/W6620673361","https://openalex.org/W6643374541","https://openalex.org/W6712987211","https://openalex.org/W6718995493","https://openalex.org/W6730427588","https://openalex.org/W6766976422","https://openalex.org/W6767387299","https://openalex.org/W6770844160"],"related_works":["https://openalex.org/W4241523039","https://openalex.org/W2360028903","https://openalex.org/W4280543773","https://openalex.org/W178231042","https://openalex.org/W4281673370","https://openalex.org/W2366083136","https://openalex.org/W2387622493","https://openalex.org/W1980001478","https://openalex.org/W2399140686","https://openalex.org/W3166711969"],"abstract_inverted_index":{"Drug":[0],"repositioning":[1,49],"has":[2],"received":[3],"increased":[4],"attention":[5,84],"since":[6],"the":[7,63,69],"past":[8],"decade":[9],"as":[10],"several":[11],"blockbuster":[12],"drugs":[13],"have":[14,40],"come":[15],"out":[16],"of":[17,27,62,71,89],"repositioning.":[18,95],"Computational":[19],"approaches":[20],"are":[21],"significantly":[22],"contributing":[23],"to":[24,43,85],"these":[25],"efforts,":[26,91],"which,":[28],"network-based":[29],"methods":[30],"play":[31],"a":[32,59,86],"key":[33],"role.":[34],"Various":[35],"structural":[36],"(topological)":[37],"network":[38,75],"measures":[39,73],"thereby":[41],"contributed":[42],"uncovering":[44],"unintuitive":[45],"functional":[46],"relationships":[47],"and":[48,53,65,82],"candidates":[50],"in":[51,93],"drug-disease":[52],"other":[54],"networks.":[55],"This":[56],"review":[57],"gives":[58],"broad":[60],"overview":[61],"topic,":[64],"offers":[66],"perspectives":[67],"on":[68],"application":[70,90],"topological":[72],"for":[74],"analysis.":[76],"It":[77],"also":[78],"discusses":[79],"unexplored":[80],"measures,":[81],"draws":[83],"wider":[87],"scope":[88],"especially":[92],"drug":[94]},"counts_by_year":[{"year":2026,"cited_by_count":1},{"year":2025,"cited_by_count":15},{"year":2024,"cited_by_count":18},{"year":2023,"cited_by_count":13},{"year":2022,"cited_by_count":11},{"year":2021,"cited_by_count":5}],"updated_date":"2026-08-29T07:29:34.045763","created_date":"2025-10-10T00:00:00"}
