{"id":"https://openalex.org/W3112513398","doi":"https://doi.org/10.1093/bib/bbaa341","title":"iDMer: an integrative and mechanism-driven response system for identifying compound interventions for sudden virus outbreak","display_name":"iDMer: an integrative and mechanism-driven response system for identifying compound interventions for sudden virus outbreak","publication_year":2020,"publication_date":"2020-10-28","ids":{"openalex":"https://openalex.org/W3112513398","doi":"https://doi.org/10.1093/bib/bbaa341","mag":"3112513398","pmid":"https://pubmed.ncbi.nlm.nih.gov/33302292"},"language":"en","primary_location":{"id":"doi:10.1093/bib/bbaa341","is_oa":false,"landing_page_url":"https://doi.org/10.1093/bib/bbaa341","pdf_url":null,"source":{"id":"https://openalex.org/S91767247","display_name":"Briefings in Bioinformatics","issn_l":"1467-5463","issn":["1467-5463","1477-4054"],"is_oa":false,"is_in_doaj":true,"is_core":true,"host_organization":"https://openalex.org/P4310311648","host_organization_name":"Oxford University Press","host_organization_lineage":["https://openalex.org/P4310311648","https://openalex.org/P4310311647"],"host_organization_lineage_names":["Oxford University Press","University of Oxford"],"type":"journal"},"license":null,"license_id":null,"version":"publishedVersion","is_accepted":true,"is_published":true,"raw_source_name":"Briefings in Bioinformatics","raw_type":"journal-article"},"type":"article","indexed_in":["crossref","doaj","pubmed"],"open_access":{"is_oa":true,"oa_status":"green","oa_url":"https://www.ncbi.nlm.nih.gov/pmc/articles/7799233","any_repository_has_fulltext":true},"authorships":[{"author_position":"first","author":{"id":"https://openalex.org/A5063936059","display_name":"Zhiting Wei","orcid":"https://orcid.org/0000-0002-0256-3072"},"institutions":[{"id":"https://openalex.org/I116953780","display_name":"Tongji University","ror":"https://ror.org/03rc6as71","country_code":"CN","type":"education","lineage":["https://openalex.org/I116953780"]}],"countries":["CN"],"is_corresponding":true,"raw_author_name":"Zhiting Wei","raw_affiliation_strings":["School of Life Sciences and Technology, Tongji University, China"],"raw_orcid":null,"affiliations":[{"raw_affiliation_string":"School of Life Sciences and Technology, Tongji University, China","institution_ids":["https://openalex.org/I116953780"]}]},{"author_position":"middle","author":{"id":"https://openalex.org/A5059163580","display_name":"Yuli Gao","orcid":null},"institutions":[{"id":"https://openalex.org/I116953780","display_name":"Tongji University","ror":"https://ror.org/03rc6as71","country_code":"CN","type":"education","lineage":["https://openalex.org/I116953780"]}],"countries":["CN"],"is_corresponding":false,"raw_author_name":"Yuli Gao","raw_affiliation_strings":["School of Life Sciences and Technology, Tongji University, China"],"raw_orcid":null,"affiliations":[{"raw_affiliation_string":"School of Life Sciences and Technology, Tongji University, China","institution_ids":["https://openalex.org/I116953780"]}]},{"author_position":"middle","author":{"id":"https://openalex.org/A5029525321","display_name":"Fangliangzi Meng","orcid":null},"institutions":[{"id":"https://openalex.org/I116953780","display_name":"Tongji University","ror":"https://ror.org/03rc6as71","country_code":"CN","type":"education","lineage":["https://openalex.org/I116953780"]}],"countries":["CN"],"is_corresponding":false,"raw_author_name":"Fangliangzi Meng","raw_affiliation_strings":["School of Life Sciences and Technology, Tongji University, China"],"raw_orcid":null,"affiliations":[{"raw_affiliation_string":"School of Life Sciences and Technology, Tongji University, China","institution_ids":["https://openalex.org/I116953780"]}]},{"author_position":"middle","author":{"id":"https://openalex.org/A5058967714","display_name":"Xin Chen","orcid":"https://orcid.org/0000-0002-8292-7699"},"institutions":[{"id":"https://openalex.org/I116953780","display_name":"Tongji University","ror":"https://ror.org/03rc6as71","country_code":"CN","type":"education","lineage":["https://openalex.org/I116953780"]}],"countries":["CN"],"is_corresponding":false,"raw_author_name":"Xin Chen","raw_affiliation_strings":["Key Laboratory of Signaling and Disease Research, School of Life Sciences and Technology, Tongji University, Shanghai, China"],"raw_orcid":null,"affiliations":[{"raw_affiliation_string":"Key Laboratory of Signaling and Disease Research, School of Life Sciences and Technology, Tongji University, Shanghai, China","institution_ids":["https://openalex.org/I116953780"]}]},{"author_position":"middle","author":{"id":"https://openalex.org/A5049590525","display_name":"Yukang Gong","orcid":"https://orcid.org/0000-0002-6570-7547"},"institutions":[{"id":"https://openalex.org/I116953780","display_name":"Tongji University","ror":"https://ror.org/03rc6as71","country_code":"CN","type":"education","lineage":["https://openalex.org/I116953780"]}],"countries":["CN"],"is_corresponding":false,"raw_author_name":"Yukang Gong","raw_affiliation_strings":["School of Life Sciences and Technology, Tongji University, China"],"raw_orcid":null,"affiliations":[{"raw_affiliation_string":"School of Life Sciences and Technology, Tongji University, China","institution_ids":["https://openalex.org/I116953780"]}]},{"author_position":"middle","author":{"id":"https://openalex.org/A5000264619","display_name":"Chenyu Zhu","orcid":"https://orcid.org/0000-0003-2101-3081"},"institutions":[{"id":"https://openalex.org/I116953780","display_name":"Tongji University","ror":"https://ror.org/03rc6as71","country_code":"CN","type":"education","lineage":["https://openalex.org/I116953780"]}],"countries":["CN"],"is_corresponding":false,"raw_author_name":"Chenyu Zhu","raw_affiliation_strings":["School of Life Sciences and Technology, Tongji University, China"],"raw_orcid":null,"affiliations":[{"raw_affiliation_string":"School of Life Sciences and Technology, Tongji University, China","institution_ids":["https://openalex.org/I116953780"]}]},{"author_position":"middle","author":{"id":"https://openalex.org/A5025696986","display_name":"Bin Ju","orcid":"https://orcid.org/0000-0003-0768-6327"},"institutions":[{"id":"https://openalex.org/I4210127700","display_name":"Zhejiang Shuren University","ror":"https://ror.org/0331z5r71","country_code":"CN","type":"education","lineage":["https://openalex.org/I4210127700"]}],"countries":["CN"],"is_corresponding":false,"raw_author_name":"Bin Ju","raw_affiliation_strings":["Zhejiang Shuren University Shulan International Medical College"],"raw_orcid":null,"affiliations":[{"raw_affiliation_string":"Zhejiang Shuren University Shulan International Medical College","institution_ids":["https://openalex.org/I4210127700"]}]},{"author_position":"middle","author":{"id":"https://openalex.org/A5100734332","display_name":"Chao Zhang","orcid":"https://orcid.org/0000-0002-0142-0280"},"institutions":[{"id":"https://openalex.org/I4210128175","display_name":"Shanghai East Hospital","ror":"https://ror.org/038xmzj21","country_code":"CN","type":"healthcare","lineage":["https://openalex.org/I4210128175"]}],"countries":["CN"],"is_corresponding":false,"raw_author_name":"Chao Zhang","raw_affiliation_strings":["Translational Medical Center for Stem Cell Therapy and Institute for Regenerative Medicine, Shanghai East Hospital, School of Life Sciences and Technology, Tongji University, Shanghai, China"],"raw_orcid":null,"affiliations":[{"raw_affiliation_string":"Translational Medical Center for Stem Cell Therapy and Institute for Regenerative Medicine, Shanghai East Hospital, School of Life Sciences and Technology, Tongji University, Shanghai, China","institution_ids":["https://openalex.org/I4210128175"]}]},{"author_position":"middle","author":{"id":"https://openalex.org/A5100660727","display_name":"Zhongmin Liu","orcid":"https://orcid.org/0000-0002-9707-4502"},"institutions":[{"id":"https://openalex.org/I4210128175","display_name":"Shanghai East Hospital","ror":"https://ror.org/038xmzj21","country_code":"CN","type":"healthcare","lineage":["https://openalex.org/I4210128175"]}],"countries":["CN"],"is_corresponding":false,"raw_author_name":"Zhongmin Liu","raw_affiliation_strings":["Translational Medical Center for Stem Cell Therapy and Institute for Regenerative Medicine, Shanghai East Hospital, Tongji University School of Medicine"],"raw_orcid":null,"affiliations":[{"raw_affiliation_string":"Translational Medical Center for Stem Cell Therapy and Institute for Regenerative Medicine, Shanghai East Hospital, Tongji University School of Medicine","institution_ids":["https://openalex.org/I4210128175"]}]},{"author_position":"last","author":{"id":"https://openalex.org/A5100453248","display_name":"Qi Liu","orcid":"https://orcid.org/0000-0003-2578-1221"},"institutions":[{"id":"https://openalex.org/I4210128175","display_name":"Shanghai East Hospital","ror":"https://ror.org/038xmzj21","country_code":"CN","type":"healthcare","lineage":["https://openalex.org/I4210128175"]}],"countries":["CN"],"is_corresponding":false,"raw_author_name":"Qi Liu","raw_affiliation_strings":["Translational Medical Center for Stem Cell Therapy and Institute for Regenerative Medicine, Shanghai East Hospital, Shanghai Key Laboratory of Signaling and Disease Research, School of Life Sciences and Technology, Tongji University, Shanghai, China"],"raw_orcid":null,"affiliations":[{"raw_affiliation_string":"Translational Medical Center for Stem Cell Therapy and Institute for Regenerative Medicine, Shanghai East Hospital, Shanghai Key Laboratory of Signaling and Disease Research, School of Life Sciences and Technology, Tongji University, Shanghai, China","institution_ids":["https://openalex.org/I4210128175"]}]}],"institutions":[],"countries_distinct_count":1,"institutions_distinct_count":10,"corresponding_author_ids":["https://openalex.org/A5063936059"],"corresponding_institution_ids":["https://openalex.org/I116953780"],"apc_list":{"value":4011,"currency":"USD","value_usd":4011},"apc_paid":null,"fwci":1.1652,"has_fulltext":false,"cited_by_count":23,"citation_normalized_percentile":{"value":0.8411321,"is_in_top_1_percent":false,"is_in_top_10_percent":false},"cited_by_percentile_year":{"min":89,"max":99},"biblio":{"volume":"22","issue":"2","first_page":"976","last_page":"987"},"is_retracted":false,"is_paratext":false,"is_xpac":false,"primary_topic":{"id":"https://openalex.org/T10211","display_name":"Computational Drug Discovery Methods","score":0.9965999722480774,"subfield":{"id":"https://openalex.org/subfields/1703","display_name":"Computational Theory and Mathematics"},"field":{"id":"https://openalex.org/fields/17","display_name":"Computer Science"},"domain":{"id":"https://openalex.org/domains/3","display_name":"Physical Sciences"}},"topics":[{"id":"https://openalex.org/T10211","display_name":"Computational Drug Discovery Methods","score":0.9965999722480774,"subfield":{"id":"https://openalex.org/subfields/1703","display_name":"Computational Theory and Mathematics"},"field":{"id":"https://openalex.org/fields/17","display_name":"Computer Science"},"domain":{"id":"https://openalex.org/domains/3","display_name":"Physical Sciences"}},{"id":"https://openalex.org/T10166","display_name":"Mosquito-borne diseases and control","score":0.9957000017166138,"subfield":{"id":"https://openalex.org/subfields/2739","display_name":"Public Health, Environmental and Occupational Health"},"field":{"id":"https://openalex.org/fields/27","display_name":"Medicine"},"domain":{"id":"https://openalex.org/domains/4","display_name":"Health Sciences"}},{"id":"https://openalex.org/T10118","display_name":"SARS-CoV-2 and COVID-19 Research","score":0.9937000274658203,"subfield":{"id":"https://openalex.org/subfields/2725","display_name":"Infectious Diseases"},"field":{"id":"https://openalex.org/fields/27","display_name":"Medicine"},"domain":{"id":"https://openalex.org/domains/4","display_name":"Health Sciences"}}],"keywords":[{"id":"https://openalex.org/keywords/mechanism","display_name":"Mechanism (biology)","score":0.7120195031166077},{"id":"https://openalex.org/keywords/virus","display_name":"Virus","score":0.6772786974906921},{"id":"https://openalex.org/keywords/outbreak","display_name":"Outbreak","score":0.6723180413246155},{"id":"https://openalex.org/keywords/severe-acute-respiratory-syndrome-coronavirus-2","display_name":"Severe acute respiratory syndrome coronavirus 2 (SARS-CoV-2)","score":0.4354987144470215},{"id":"https://openalex.org/keywords/identification","display_name":"Identification (biology)","score":0.4351981580257416},{"id":"https://openalex.org/keywords/computational-biology","display_name":"Computational biology","score":0.43282458186149597},{"id":"https://openalex.org/keywords/coronavirus-disease-2019","display_name":"Coronavirus disease 2019 (COVID-19)","score":0.4215962290763855},{"id":"https://openalex.org/keywords/virology","display_name":"Virology","score":0.4028926193714142},{"id":"https://openalex.org/keywords/medicine","display_name":"Medicine","score":0.37405601143836975},{"id":"https://openalex.org/keywords/biology","display_name":"Biology","score":0.36553698778152466},{"id":"https://openalex.org/keywords/disease","display_name":"Disease","score":0.16475841403007507},{"id":"https://openalex.org/keywords/infectious-disease","display_name":"Infectious disease (medical specialty)","score":0.10416847467422485}],"concepts":[{"id":"https://openalex.org/C89611455","wikidata":"https://www.wikidata.org/wiki/Q6804646","display_name":"Mechanism (biology)","level":2,"score":0.7120195031166077},{"id":"https://openalex.org/C2522874641","wikidata":"https://www.wikidata.org/wiki/Q808","display_name":"Virus","level":2,"score":0.6772786974906921},{"id":"https://openalex.org/C116675565","wikidata":"https://www.wikidata.org/wiki/Q3241045","display_name":"Outbreak","level":2,"score":0.6723180413246155},{"id":"https://openalex.org/C3007834351","wikidata":"https://www.wikidata.org/wiki/Q82069695","display_name":"Severe acute respiratory syndrome coronavirus 2 (SARS-CoV-2)","level":5,"score":0.4354987144470215},{"id":"https://openalex.org/C116834253","wikidata":"https://www.wikidata.org/wiki/Q2039217","display_name":"Identification (biology)","level":2,"score":0.4351981580257416},{"id":"https://openalex.org/C70721500","wikidata":"https://www.wikidata.org/wiki/Q177005","display_name":"Computational biology","level":1,"score":0.43282458186149597},{"id":"https://openalex.org/C3008058167","wikidata":"https://www.wikidata.org/wiki/Q84263196","display_name":"Coronavirus disease 2019 (COVID-19)","level":4,"score":0.4215962290763855},{"id":"https://openalex.org/C159047783","wikidata":"https://www.wikidata.org/wiki/Q7215","display_name":"Virology","level":1,"score":0.4028926193714142},{"id":"https://openalex.org/C71924100","wikidata":"https://www.wikidata.org/wiki/Q11190","display_name":"Medicine","level":0,"score":0.37405601143836975},{"id":"https://openalex.org/C86803240","wikidata":"https://www.wikidata.org/wiki/Q420","display_name":"Biology","level":0,"score":0.36553698778152466},{"id":"https://openalex.org/C2779134260","wikidata":"https://www.wikidata.org/wiki/Q12136","display_name":"Disease","level":2,"score":0.16475841403007507},{"id":"https://openalex.org/C524204448","wikidata":"https://www.wikidata.org/wiki/Q788926","display_name":"Infectious disease (medical specialty)","level":3,"score":0.10416847467422485},{"id":"https://openalex.org/C138885662","wikidata":"https://www.wikidata.org/wiki/Q5891","display_name":"Philosophy","level":0,"score":0.0},{"id":"https://openalex.org/C59822182","wikidata":"https://www.wikidata.org/wiki/Q441","display_name":"Botany","level":1,"score":0.0},{"id":"https://openalex.org/C111472728","wikidata":"https://www.wikidata.org/wiki/Q9471","display_name":"Epistemology","level":1,"score":0.0},{"id":"https://openalex.org/C142724271","wikidata":"https://www.wikidata.org/wiki/Q7208","display_name":"Pathology","level":1,"score":0.0}],"mesh":[{"descriptor_ui":"D000076662","descriptor_name":"Host Microbial Interactions","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D000076662","descriptor_name":"Host Microbial Interactions","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D000076662","descriptor_name":"Host Microbial Interactions","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D000086382","descriptor_name":"COVID-19","qualifier_ui":"Q000453","qualifier_name":"epidemiology","is_major_topic":false},{"descriptor_ui":"D000086382","descriptor_name":"COVID-19","qualifier_ui":"Q000453","qualifier_name":"epidemiology","is_major_topic":false},{"descriptor_ui":"D000086382","descriptor_name":"COVID-19","qualifier_ui":"Q000453","qualifier_name":"epidemiology","is_major_topic":false},{"descriptor_ui":"D000086382","descriptor_name":"COVID-19","qualifier_ui":"Q000821","qualifier_name":"virology","is_major_topic":false},{"descriptor_ui":"D000086382","descriptor_name":"COVID-19","qualifier_ui":"Q000821","qualifier_name":"virology","is_major_topic":false},{"descriptor_ui":"D000086382","descriptor_name":"COVID-19","qualifier_ui":"Q000821","qualifier_name":"virology","is_major_topic":false},{"descriptor_ui":"D000086402","descriptor_name":"SARS-CoV-2","qualifier_ui":"Q000302","qualifier_name":"isolation & purification","is_major_topic":false},{"descriptor_ui":"D000086402","descriptor_name":"SARS-CoV-2","qualifier_ui":"Q000302","qualifier_name":"isolation & purification","is_major_topic":false},{"descriptor_ui":"D000086402","descriptor_name":"SARS-CoV-2","qualifier_ui":"Q000302","qualifier_name":"isolation & purification","is_major_topic":false},{"descriptor_ui":"D000465","descriptor_name":"Algorithms","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D000465","descriptor_name":"Algorithms","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D000465","descriptor_name":"Algorithms","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D001343","descriptor_name":"Autophagy","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D001343","descriptor_name":"Autophagy","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D001343","descriptor_name":"Autophagy","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D004196","descriptor_name":"Disease Outbreaks","qualifier_ui":null,"qualifier_name":null,"is_major_topic":true},{"descriptor_ui":"D004196","descriptor_name":"Disease Outbreaks","qualifier_ui":null,"qualifier_name":null,"is_major_topic":true},{"descriptor_ui":"D004196","descriptor_name":"Disease Outbreaks","qualifier_ui":null,"qualifier_name":null,"is_major_topic":true},{"descriptor_ui":"D006801","descriptor_name":"Humans","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D006801","descriptor_name":"Humans","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D006801","descriptor_name":"Humans","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D017423","descriptor_name":"Sequence Analysis, RNA","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D017423","descriptor_name":"Sequence Analysis, RNA","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D017423","descriptor_name":"Sequence Analysis, RNA","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false}],"locations_count":4,"locations":[{"id":"doi:10.1093/bib/bbaa341","is_oa":false,"landing_page_url":"https://doi.org/10.1093/bib/bbaa341","pdf_url":null,"source":{"id":"https://openalex.org/S91767247","display_name":"Briefings in Bioinformatics","issn_l":"1467-5463","issn":["1467-5463","1477-4054"],"is_oa":false,"is_in_doaj":true,"is_core":true,"host_organization":"https://openalex.org/P4310311648","host_organization_name":"Oxford University Press","host_organization_lineage":["https://openalex.org/P4310311648","https://openalex.org/P4310311647"],"host_organization_lineage_names":["Oxford University Press","University of Oxford"],"type":"journal"},"license":null,"license_id":null,"version":"publishedVersion","is_accepted":true,"is_published":true,"raw_source_name":"Briefings in Bioinformatics","raw_type":"journal-article"},{"id":"pmid:33302292","is_oa":false,"landing_page_url":"https://pubmed.ncbi.nlm.nih.gov/33302292","pdf_url":null,"source":{"id":"https://openalex.org/S4306525036","display_name":"PubMed","issn_l":null,"issn":null,"is_oa":false,"is_in_doaj":false,"is_core":false,"host_organization":"https://openalex.org/I1299303238","host_organization_name":"National Institutes of Health","host_organization_lineage":["https://openalex.org/I1299303238"],"host_organization_lineage_names":[],"type":"repository"},"license":null,"license_id":null,"version":"publishedVersion","is_accepted":true,"is_published":true,"raw_source_name":"Briefings in bioinformatics","raw_type":null},{"id":"pmh:oai:europepmc.org:6735145","is_oa":false,"landing_page_url":"http://europepmc.org/pmc/articles/PMC7799233","pdf_url":null,"source":{"id":"https://openalex.org/S4306400806","display_name":"Europe PMC (PubMed Central)","issn_l":null,"issn":null,"is_oa":false,"is_in_doaj":false,"is_core":false,"host_organization":"https://openalex.org/I1303153112","host_organization_name":"European Bioinformatics Institute","host_organization_lineage":["https://openalex.org/I1303153112"],"host_organization_lineage_names":[],"type":"repository"},"license":null,"license_id":null,"version":"submittedVersion","is_accepted":false,"is_published":false,"raw_source_name":"","raw_type":"Text"},{"id":"pmh:oai:pubmedcentral.nih.gov:7799233","is_oa":true,"landing_page_url":"https://www.ncbi.nlm.nih.gov/pmc/articles/7799233","pdf_url":null,"source":{"id":"https://openalex.org/S2764455111","display_name":"PubMed Central","issn_l":null,"issn":null,"is_oa":true,"is_in_doaj":false,"is_core":false,"host_organization":"https://openalex.org/I1299303238","host_organization_name":"National Institutes of Health","host_organization_lineage":["https://openalex.org/I1299303238"],"host_organization_lineage_names":[],"type":"repository"},"license":null,"license_id":null,"version":"submittedVersion","is_accepted":false,"is_published":false,"raw_source_name":"Brief Bioinform","raw_type":"Text"}],"best_oa_location":{"id":"pmh:oai:pubmedcentral.nih.gov:7799233","is_oa":true,"landing_page_url":"https://www.ncbi.nlm.nih.gov/pmc/articles/7799233","pdf_url":null,"source":{"id":"https://openalex.org/S2764455111","display_name":"PubMed Central","issn_l":null,"issn":null,"is_oa":true,"is_in_doaj":false,"is_core":false,"host_organization":"https://openalex.org/I1299303238","host_organization_name":"National Institutes of Health","host_organization_lineage":["https://openalex.org/I1299303238"],"host_organization_lineage_names":[],"type":"repository"},"license":null,"license_id":null,"version":"submittedVersion","is_accepted":false,"is_published":false,"raw_source_name":"Brief Bioinform","raw_type":"Text"},"sustainable_development_goals":[{"display_name":"Good health and well-being","id":"https://metadata.un.org/sdg/3","score":0.8500000238418579}],"awards":[{"id":"https://openalex.org/G2690504601","display_name":null,"funder_award_id":"2017YFC0908500","funder_id":"https://openalex.org/F4320335777","funder_display_name":"National Key Research and Development Program of China"},{"id":"https://openalex.org/G5701494014","display_name":null,"funder_award_id":"2016YFC1303205","funder_id":"https://openalex.org/F4320335777","funder_display_name":"National Key Research and Development Program of China"},{"id":"https://openalex.org/G6856097300","display_name":null,"funder_award_id":"31970638","funder_id":"https://openalex.org/F4320321001","funder_display_name":"National Natural Science Foundation of China"},{"id":"https://openalex.org/G7086079520","display_name":null,"funder_award_id":"61572361","funder_id":"https://openalex.org/F4320321001","funder_display_name":"National Natural Science Foundation of China"}],"funders":[{"id":"https://openalex.org/F4320321001","display_name":"National Natural Science Foundation of China","ror":"https://ror.org/01h0zpd94"},{"id":"https://openalex.org/F4320335777","display_name":"National Key Research and Development Program of China","ror":null}],"has_content":{"grobid_xml":false,"pdf":false},"content_urls":null,"referenced_works_count":58,"referenced_works":["https://openalex.org/W1533861849","https://openalex.org/W1578932543","https://openalex.org/W2028133290","https://openalex.org/W2035618305","https://openalex.org/W2057545775","https://openalex.org/W2058283739","https://openalex.org/W2061496561","https://openalex.org/W2103565574","https://openalex.org/W2110256992","https://openalex.org/W2114104545","https://openalex.org/W2121604817","https://openalex.org/W2129089567","https://openalex.org/W2130410032","https://openalex.org/W2136170412","https://openalex.org/W2138207763","https://openalex.org/W2138474066","https://openalex.org/W2148742147","https://openalex.org/W2255243349","https://openalex.org/W2489003193","https://openalex.org/W2491014331","https://openalex.org/W2537903183","https://openalex.org/W2585831040","https://openalex.org/W2612467560","https://openalex.org/W2796022095","https://openalex.org/W2796061259","https://openalex.org/W2801088198","https://openalex.org/W2801622988","https://openalex.org/W2802200505","https://openalex.org/W2905224888","https://openalex.org/W2951679282","https://openalex.org/W2969176196","https://openalex.org/W2971933740","https://openalex.org/W2974953723","https://openalex.org/W2994840508","https://openalex.org/W2998220730","https://openalex.org/W2999629617","https://openalex.org/W3011072970","https://openalex.org/W3012421327","https://openalex.org/W3012994592","https://openalex.org/W3013568541","https://openalex.org/W3014203610","https://openalex.org/W3015321334","https://openalex.org/W3015369767","https://openalex.org/W3015466348","https://openalex.org/W3015956745","https://openalex.org/W3016661132","https://openalex.org/W3017041546","https://openalex.org/W3018483808","https://openalex.org/W3020239101","https://openalex.org/W3022285953","https://openalex.org/W3099354057","https://openalex.org/W6631943919","https://openalex.org/W6757374366","https://openalex.org/W6767710714","https://openalex.org/W6775586402","https://openalex.org/W6775873214","https://openalex.org/W6776208904","https://openalex.org/W6776383934"],"related_works":["https://openalex.org/W2373635223","https://openalex.org/W2412355096","https://openalex.org/W2431766951","https://openalex.org/W1990012352","https://openalex.org/W127458931","https://openalex.org/W4385969441","https://openalex.org/W2362266265","https://openalex.org/W2058284656","https://openalex.org/W3028429280","https://openalex.org/W3096227606"],"abstract_inverted_index":{"Emerging":[0],"viral":[1,16,60,85],"infections":[2,61,86],"seriously":[3],"threaten":[4],"human":[5],"health":[6],"globally.":[7],"Several":[8],"challenges":[9,105],"exist":[10],"in":[11,50,181],"identifying":[12,80],"effective":[13,81,215],"compounds":[14,42,82,177,214],"against":[15],"infections:":[17],"(1)":[18],"at":[19,192],"the":[20,40,63,107,159,182,193,196,207],"initial":[21],"stage":[22],"of":[23,66,199,206,213],"a":[24,120,128,132],"new":[25],"virus":[26,109,146,188,217],"outbreak,":[27],"little":[28],"information,":[29,34],"except":[30],"for":[31,79,102,145,172,187,216],"its":[32],"genome":[33],"may":[35,43,47],"be":[36,44,48],"available;":[37],"(2)":[38],"although":[39],"identified":[41,211],"effective,":[45],"they":[46],"toxic":[49],"vivo":[51],"and":[52,98,127,141],"(3)":[53],"cytokine":[54],"release":[55],"syndrome":[56,164],"(CRS)":[57],"triggered":[58],"by":[59],"is":[62,87],"primary":[64],"cause":[65],"mortality.":[67],"Currently,":[68],"an":[69,96,124],"integrative":[70,97,134],"tool":[71],"that":[72,118,178,204],"takes":[73],"all":[74,173],"those":[75],"aspects":[76],"into":[77],"consideration":[78],"to":[83],"prevent":[84],"absent.":[88],"In":[89],"this":[90],"study,":[91],"we":[92,202],"developed":[93],"iDMer,":[94],"as":[95],"mechanism-driven":[99,114],"response":[100],"system":[101],"addressing":[103],"these":[104],"during":[106],"sudden":[108],"outbreaks.":[110],"iDMer":[111,136,151],"comprises":[112],"three":[113],"compound":[115,138,142],"identification":[116,144],"modules,":[117],"is,":[119],"virus-host":[121],"interaction-oriented":[122],"module,":[123],"autophagy-oriented":[125],"module":[126],"CRS-oriented":[129],"module.":[130],"As":[131],"one-stop":[133],"platform,":[135],"incorporates":[137],"toxicity":[139],"evaluation":[140],"combination":[143],"treatment":[147,189],"with":[148,219],"clear":[149,220],"mechanisms.":[150,221],"was":[152],"successfully":[153,210],"tested":[154,175],"on":[155],"five":[156,174],"viruses,":[157,176],"including":[158],"current":[160],"severe":[161],"acute":[162],"respiratory":[163],"coronavirus":[165],"2":[166],"(SARS-CoV-2).":[167],"Our":[168],"results":[169],"indicated":[170],"that,":[171],"were":[179,190],"reported":[180],"literature":[183],"or":[184],"experimentally":[185],"validated":[186],"enriched":[191],"top,":[194],"demonstrating":[195],"generalized":[197],"effectiveness":[198],"iDMer.":[200],"Finally,":[201],"demonstrated":[203],"combinations":[205,212],"individual":[208],"modules":[209],"intervention":[218]},"counts_by_year":[{"year":2026,"cited_by_count":2},{"year":2025,"cited_by_count":8},{"year":2024,"cited_by_count":5},{"year":2023,"cited_by_count":4},{"year":2022,"cited_by_count":3},{"year":2021,"cited_by_count":1}],"updated_date":"2026-04-29T09:16:38.111599","created_date":"2025-10-10T00:00:00"}
