{"id":"https://openalex.org/W3100129010","doi":"https://doi.org/10.1093/bib/bbaa286","title":"Tracing the footsteps of autophagy in computational biology","display_name":"Tracing the footsteps of autophagy in computational biology","publication_year":2020,"publication_date":"2020-10-03","ids":{"openalex":"https://openalex.org/W3100129010","doi":"https://doi.org/10.1093/bib/bbaa286","mag":"3100129010","pmid":"https://pubmed.ncbi.nlm.nih.gov/33201177"},"language":"en","primary_location":{"id":"doi:10.1093/bib/bbaa286","is_oa":true,"landing_page_url":"https://doi.org/10.1093/bib/bbaa286","pdf_url":"https://academic.oup.com/bib/article-pdf/22/4/bbaa286/39129227/bbaa286.pdf","source":{"id":"https://openalex.org/S91767247","display_name":"Briefings in Bioinformatics","issn_l":"1467-5463","issn":["1467-5463","1477-4054"],"is_oa":false,"is_in_doaj":true,"is_core":true,"host_organization":"https://openalex.org/P4310311648","host_organization_name":"Oxford University Press","host_organization_lineage":["https://openalex.org/P4310311648","https://openalex.org/P4310311647"],"host_organization_lineage_names":["Oxford University Press","University of Oxford"],"type":"journal"},"license":null,"license_id":null,"version":"publishedVersion","is_accepted":true,"is_published":true,"raw_source_name":"Briefings in Bioinformatics","raw_type":"journal-article"},"type":"article","indexed_in":["crossref","doaj","pubmed"],"open_access":{"is_oa":true,"oa_status":"bronze","oa_url":"https://academic.oup.com/bib/article-pdf/22/4/bbaa286/39129227/bbaa286.pdf","any_repository_has_fulltext":true},"authorships":[{"author_position":"first","author":{"id":"https://openalex.org/A5076905376","display_name":"Dipanka Tanu Sarmah","orcid":null},"institutions":[{"id":"https://openalex.org/I2801880299","display_name":"Translational Health Science and Technology Institute","ror":"https://ror.org/01qjqvr92","country_code":"IN","type":"government","lineage":["https://openalex.org/I2799351866","https://openalex.org/I2801880299","https://openalex.org/I4210134808"]}],"countries":["IN"],"is_corresponding":false,"raw_author_name":"Dipanka Tanu Sarmah","raw_affiliation_strings":["Translational Health Science and Technology Institute, Faridabad, India"],"raw_orcid":null,"affiliations":[{"raw_affiliation_string":"Translational Health Science and Technology Institute, Faridabad, India","institution_ids":["https://openalex.org/I2801880299"]}]},{"author_position":"middle","author":{"id":"https://openalex.org/A5076154607","display_name":"Nandadulal Bairagi","orcid":"https://orcid.org/0000-0001-8867-7996"},"institutions":[{"id":"https://openalex.org/I170979836","display_name":"Jadavpur University","ror":"https://ror.org/02af4h012","country_code":"IN","type":"education","lineage":["https://openalex.org/I170979836"]}],"countries":["IN"],"is_corresponding":false,"raw_author_name":"Nandadulal Bairagi","raw_affiliation_strings":["Centre for Mathematical Biology and Ecology, Department of Mathematics, Jadavpur University, Kolkata, India"],"raw_orcid":null,"affiliations":[{"raw_affiliation_string":"Centre for Mathematical Biology and Ecology, Department of Mathematics, Jadavpur University, Kolkata, India","institution_ids":["https://openalex.org/I170979836"]}]},{"author_position":"last","author":{"id":"https://openalex.org/A5082491317","display_name":"Samrat Chatterjee","orcid":"https://orcid.org/0000-0002-5010-2799"},"institutions":[{"id":"https://openalex.org/I2801880299","display_name":"Translational Health Science and Technology Institute","ror":"https://ror.org/01qjqvr92","country_code":"IN","type":"government","lineage":["https://openalex.org/I2799351866","https://openalex.org/I2801880299","https://openalex.org/I4210134808"]}],"countries":["IN"],"is_corresponding":true,"raw_author_name":"Samrat Chatterjee","raw_affiliation_strings":["Translational Health Science and Technology Institute, Faridabad, India"],"raw_orcid":null,"affiliations":[{"raw_affiliation_string":"Translational Health Science and Technology Institute, Faridabad, India","institution_ids":["https://openalex.org/I2801880299"]}]}],"institutions":[],"countries_distinct_count":1,"institutions_distinct_count":2,"corresponding_author_ids":["https://openalex.org/A5082491317"],"corresponding_institution_ids":["https://openalex.org/I2801880299"],"apc_list":{"value":4011,"currency":"USD","value_usd":4011},"apc_paid":null,"fwci":1.753,"has_fulltext":true,"cited_by_count":18,"citation_normalized_percentile":{"value":0.85910711,"is_in_top_1_percent":false,"is_in_top_10_percent":false},"cited_by_percentile_year":{"min":93,"max":99},"biblio":{"volume":"22","issue":"4","first_page":null,"last_page":null},"is_retracted":false,"is_paratext":false,"is_xpac":false,"primary_topic":{"id":"https://openalex.org/T10587","display_name":"Autophagy in Disease and Therapy","score":0.9997000098228455,"subfield":{"id":"https://openalex.org/subfields/2713","display_name":"Epidemiology"},"field":{"id":"https://openalex.org/fields/27","display_name":"Medicine"},"domain":{"id":"https://openalex.org/domains/4","display_name":"Health Sciences"}},"topics":[{"id":"https://openalex.org/T10587","display_name":"Autophagy in Disease and Therapy","score":0.9997000098228455,"subfield":{"id":"https://openalex.org/subfields/2713","display_name":"Epidemiology"},"field":{"id":"https://openalex.org/fields/27","display_name":"Medicine"},"domain":{"id":"https://openalex.org/domains/4","display_name":"Health Sciences"}},{"id":"https://openalex.org/T11844","display_name":"Lipid metabolism and biosynthesis","score":0.9397000074386597,"subfield":{"id":"https://openalex.org/subfields/1303","display_name":"Biochemistry"},"field":{"id":"https://openalex.org/fields/13","display_name":"Biochemistry, Genetics and Molecular Biology"},"domain":{"id":"https://openalex.org/domains/1","display_name":"Life Sciences"}},{"id":"https://openalex.org/T13142","display_name":"GABA and Rice Research","score":0.906000018119812,"subfield":{"id":"https://openalex.org/subfields/1110","display_name":"Plant Science"},"field":{"id":"https://openalex.org/fields/11","display_name":"Agricultural and Biological Sciences"},"domain":{"id":"https://openalex.org/domains/1","display_name":"Life Sciences"}}],"keywords":[{"id":"https://openalex.org/keywords/autophagy","display_name":"Autophagy","score":0.959153950214386},{"id":"https://openalex.org/keywords/process","display_name":"Process (computing)","score":0.5587612986564636},{"id":"https://openalex.org/keywords/computer-science","display_name":"Computer science","score":0.5454918742179871},{"id":"https://openalex.org/keywords/systems-biology","display_name":"Systems biology","score":0.5328567028045654},{"id":"https://openalex.org/keywords/computational-biology","display_name":"Computational biology","score":0.5302184224128723},{"id":"https://openalex.org/keywords/cell-biology","display_name":"Cell biology","score":0.5145220160484314},{"id":"https://openalex.org/keywords/biology","display_name":"Biology","score":0.45428916811943054},{"id":"https://openalex.org/keywords/biochemical-engineering","display_name":"Biochemical engineering","score":0.3404521942138672},{"id":"https://openalex.org/keywords/biochemistry","display_name":"Biochemistry","score":0.16301557421684265},{"id":"https://openalex.org/keywords/engineering","display_name":"Engineering","score":0.1448935568332672}],"concepts":[{"id":"https://openalex.org/C203522944","wikidata":"https://www.wikidata.org/wiki/Q288322","display_name":"Autophagy","level":3,"score":0.959153950214386},{"id":"https://openalex.org/C98045186","wikidata":"https://www.wikidata.org/wiki/Q205663","display_name":"Process (computing)","level":2,"score":0.5587612986564636},{"id":"https://openalex.org/C41008148","wikidata":"https://www.wikidata.org/wiki/Q21198","display_name":"Computer science","level":0,"score":0.5454918742179871},{"id":"https://openalex.org/C152662350","wikidata":"https://www.wikidata.org/wiki/Q815297","display_name":"Systems biology","level":2,"score":0.5328567028045654},{"id":"https://openalex.org/C70721500","wikidata":"https://www.wikidata.org/wiki/Q177005","display_name":"Computational biology","level":1,"score":0.5302184224128723},{"id":"https://openalex.org/C95444343","wikidata":"https://www.wikidata.org/wiki/Q7141","display_name":"Cell biology","level":1,"score":0.5145220160484314},{"id":"https://openalex.org/C86803240","wikidata":"https://www.wikidata.org/wiki/Q420","display_name":"Biology","level":0,"score":0.45428916811943054},{"id":"https://openalex.org/C183696295","wikidata":"https://www.wikidata.org/wiki/Q2487696","display_name":"Biochemical engineering","level":1,"score":0.3404521942138672},{"id":"https://openalex.org/C55493867","wikidata":"https://www.wikidata.org/wiki/Q7094","display_name":"Biochemistry","level":1,"score":0.16301557421684265},{"id":"https://openalex.org/C127413603","wikidata":"https://www.wikidata.org/wiki/Q11023","display_name":"Engineering","level":0,"score":0.1448935568332672},{"id":"https://openalex.org/C111919701","wikidata":"https://www.wikidata.org/wiki/Q9135","display_name":"Operating system","level":1,"score":0.0},{"id":"https://openalex.org/C190283241","wikidata":"https://www.wikidata.org/wiki/Q14599311","display_name":"Apoptosis","level":2,"score":0.0}],"mesh":[{"descriptor_ui":"D001343","descriptor_name":"Autophagy","qualifier_ui":null,"qualifier_name":null,"is_major_topic":true},{"descriptor_ui":"D001343","descriptor_name":"Autophagy","qualifier_ui":null,"qualifier_name":null,"is_major_topic":true},{"descriptor_ui":"D001343","descriptor_name":"Autophagy","qualifier_ui":null,"qualifier_name":null,"is_major_topic":true},{"descriptor_ui":"D006801","descriptor_name":"Humans","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D006801","descriptor_name":"Humans","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D006801","descriptor_name":"Humans","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D008954","descriptor_name":"Models, Biological","qualifier_ui":null,"qualifier_name":null,"is_major_topic":true},{"descriptor_ui":"D008954","descriptor_name":"Models, Biological","qualifier_ui":null,"qualifier_name":null,"is_major_topic":true},{"descriptor_ui":"D008954","descriptor_name":"Models, Biological","qualifier_ui":null,"qualifier_name":null,"is_major_topic":true},{"descriptor_ui":"D009369","descriptor_name":"Neoplasms","qualifier_ui":"Q000378","qualifier_name":"metabolism","is_major_topic":false},{"descriptor_ui":"D009369","descriptor_name":"Neoplasms","qualifier_ui":"Q000378","qualifier_name":"metabolism","is_major_topic":false},{"descriptor_ui":"D009369","descriptor_name":"Neoplasms","qualifier_ui":"Q000378","qualifier_name":"metabolism","is_major_topic":false},{"descriptor_ui":"D015398","descriptor_name":"Signal Transduction","qualifier_ui":null,"qualifier_name":null,"is_major_topic":true},{"descriptor_ui":"D015398","descriptor_name":"Signal Transduction","qualifier_ui":null,"qualifier_name":null,"is_major_topic":true},{"descriptor_ui":"D015398","descriptor_name":"Signal Transduction","qualifier_ui":null,"qualifier_name":null,"is_major_topic":true},{"descriptor_ui":"D019295","descriptor_name":"Computational Biology","qualifier_ui":null,"qualifier_name":null,"is_major_topic":true},{"descriptor_ui":"D019295","descriptor_name":"Computational Biology","qualifier_ui":null,"qualifier_name":null,"is_major_topic":true},{"descriptor_ui":"D019295","descriptor_name":"Computational Biology","qualifier_ui":null,"qualifier_name":null,"is_major_topic":true}],"locations_count":3,"locations":[{"id":"doi:10.1093/bib/bbaa286","is_oa":true,"landing_page_url":"https://doi.org/10.1093/bib/bbaa286","pdf_url":"https://academic.oup.com/bib/article-pdf/22/4/bbaa286/39129227/bbaa286.pdf","source":{"id":"https://openalex.org/S91767247","display_name":"Briefings in Bioinformatics","issn_l":"1467-5463","issn":["1467-5463","1477-4054"],"is_oa":false,"is_in_doaj":true,"is_core":true,"host_organization":"https://openalex.org/P4310311648","host_organization_name":"Oxford University Press","host_organization_lineage":["https://openalex.org/P4310311648","https://openalex.org/P4310311647"],"host_organization_lineage_names":["Oxford University Press","University of Oxford"],"type":"journal"},"license":null,"license_id":null,"version":"publishedVersion","is_accepted":true,"is_published":true,"raw_source_name":"Briefings in Bioinformatics","raw_type":"journal-article"},{"id":"pmid:33201177","is_oa":false,"landing_page_url":"https://pubmed.ncbi.nlm.nih.gov/33201177","pdf_url":null,"source":{"id":"https://openalex.org/S4306525036","display_name":"PubMed","issn_l":null,"issn":null,"is_oa":false,"is_in_doaj":false,"is_core":false,"host_organization":"https://openalex.org/I1299303238","host_organization_name":"National Institutes of Health","host_organization_lineage":["https://openalex.org/I1299303238"],"host_organization_lineage_names":[],"type":"repository"},"license":null,"license_id":null,"version":"publishedVersion","is_accepted":true,"is_published":true,"raw_source_name":"Briefings in bioinformatics","raw_type":null},{"id":"pmh:oai:pubmedcentral.nih.gov:8293817","is_oa":true,"landing_page_url":"https://www.ncbi.nlm.nih.gov/pmc/articles/8293817","pdf_url":null,"source":{"id":"https://openalex.org/S2764455111","display_name":"PubMed Central","issn_l":null,"issn":null,"is_oa":true,"is_in_doaj":false,"is_core":false,"host_organization":"https://openalex.org/I1299303238","host_organization_name":"National Institutes of Health","host_organization_lineage":["https://openalex.org/I1299303238"],"host_organization_lineage_names":[],"type":"repository"},"license":"other-oa","license_id":"https://openalex.org/licenses/other-oa","version":"submittedVersion","is_accepted":false,"is_published":false,"raw_source_name":"Brief Bioinform","raw_type":"Text"}],"best_oa_location":{"id":"doi:10.1093/bib/bbaa286","is_oa":true,"landing_page_url":"https://doi.org/10.1093/bib/bbaa286","pdf_url":"https://academic.oup.com/bib/article-pdf/22/4/bbaa286/39129227/bbaa286.pdf","source":{"id":"https://openalex.org/S91767247","display_name":"Briefings in Bioinformatics","issn_l":"1467-5463","issn":["1467-5463","1477-4054"],"is_oa":false,"is_in_doaj":true,"is_core":true,"host_organization":"https://openalex.org/P4310311648","host_organization_name":"Oxford University Press","host_organization_lineage":["https://openalex.org/P4310311648","https://openalex.org/P4310311647"],"host_organization_lineage_names":["Oxford University Press","University of Oxford"],"type":"journal"},"license":null,"license_id":null,"version":"publishedVersion","is_accepted":true,"is_published":true,"raw_source_name":"Briefings in Bioinformatics","raw_type":"journal-article"},"sustainable_development_goals":[],"awards":[{"id":"https://openalex.org/G3240534216","display_name":null,"funder_award_id":"BT/PR15426/BRB/10/1459/2015","funder_id":"https://openalex.org/F4320326656","funder_display_name":"Department of Biotechnology, Government of West Bengal"}],"funders":[{"id":"https://openalex.org/F4320326656","display_name":"Department of Biotechnology, Government of West Bengal","ror":null}],"has_content":{"pdf":true,"grobid_xml":true},"content_urls":{"pdf":"https://content.openalex.org/works/W3100129010.pdf","grobid_xml":"https://content.openalex.org/works/W3100129010.grobid-xml"},"referenced_works_count":199,"referenced_works":["https://openalex.org/W1531760003","https://openalex.org/W1533335653","https://openalex.org/W1539484291","https://openalex.org/W1544455702","https://openalex.org/W1546952499","https://openalex.org/W1561267729","https://openalex.org/W1565707194","https://openalex.org/W1573621493","https://openalex.org/W1592095850","https://openalex.org/W1843865990","https://openalex.org/W1857680029","https://openalex.org/W1916339519","https://openalex.org/W1935781822","https://openalex.org/W1963861745","https://openalex.org/W1966327575","https://openalex.org/W1969756145","https://openalex.org/W1970547564","https://openalex.org/W1978486653","https://openalex.org/W1980084094","https://openalex.org/W1989277387","https://openalex.org/W1994823455","https://openalex.org/W2000860171","https://openalex.org/W2003059814","https://openalex.org/W2003657279","https://openalex.org/W2004325124","https://openalex.org/W2009741382","https://openalex.org/W2010008722","https://openalex.org/W2010099799","https://openalex.org/W2012255493","https://openalex.org/W2015126838","https://openalex.org/W2017138237","https://openalex.org/W2021929002","https://openalex.org/W2028243054","https://openalex.org/W2030287946","https://openalex.org/W2031978571","https://openalex.org/W2038264484","https://openalex.org/W2039921716","https://openalex.org/W2045949302","https://openalex.org/W2047998870","https://openalex.org/W2052388933","https://openalex.org/W2054536978","https://openalex.org/W2056265508","https://openalex.org/W2059359223","https://openalex.org/W2067684692","https://openalex.org/W2067688951","https://openalex.org/W2067692987","https://openalex.org/W2070050178","https://openalex.org/W2073367883","https://openalex.org/W2076708045","https://openalex.org/W2080746576","https://openalex.org/W2082199132","https://openalex.org/W2089693172","https://openalex.org/W2090277882","https://openalex.org/W2091789479","https://openalex.org/W2095691234","https://openalex.org/W2096651985","https://openalex.org/W2097197448","https://openalex.org/W2097212778","https://openalex.org/W2097240335","https://openalex.org/W2098012175","https://openalex.org/W2098295452","https://openalex.org/W2101234009","https://openalex.org/W2102263388","https://openalex.org/W2102373577","https://openalex.org/W2103912979","https://openalex.org/W2104855667","https://openalex.org/W2105044604","https://openalex.org/W2109034822","https://openalex.org/W2111607671","https://openalex.org/W2112682311","https://openalex.org/W2112811019","https://openalex.org/W2113465510","https://openalex.org/W2114456941","https://openalex.org/W2115343689","https://openalex.org/W2118258530","https://openalex.org/W2118824013","https://openalex.org/W2121905803","https://openalex.org/W2123838232","https://openalex.org/W2125910575","https://openalex.org/W2128681673","https://openalex.org/W2128741675","https://openalex.org/W2129140439","https://openalex.org/W2130534254","https://openalex.org/W2130863229","https://openalex.org/W2132034930","https://openalex.org/W2132208166","https://openalex.org/W2133284292","https://openalex.org/W2135857985","https://openalex.org/W2136850043","https://openalex.org/W2141918250","https://openalex.org/W2143784594","https://openalex.org/W2145889895","https://openalex.org/W2146212356","https://openalex.org/W2148709687","https://openalex.org/W2149194035","https://openalex.org/W2150027419","https://openalex.org/W2150704630","https://openalex.org/W2154748862","https://openalex.org/W2158217645","https://openalex.org/W2159482845","https://openalex.org/W2159675211","https://openalex.org/W2159754384","https://openalex.org/W2160348999","https://openalex.org/W2160697532","https://openalex.org/W2161050915","https://openalex.org/W2164129975","https://openalex.org/W2164928285","https://openalex.org/W2165233581","https://openalex.org/W2166542841","https://openalex.org/W2169589032","https://openalex.org/W2170122529","https://openalex.org/W2170543954","https://openalex.org/W2170776520","https://openalex.org/W2171030481","https://openalex.org/W2179438025","https://openalex.org/W2180749449","https://openalex.org/W2207463207","https://openalex.org/W2214208728","https://openalex.org/W2266996997","https://openalex.org/W2271932771","https://openalex.org/W2286125826","https://openalex.org/W2335008118","https://openalex.org/W2338592366","https://openalex.org/W2401083434","https://openalex.org/W2412839122","https://openalex.org/W2472278630","https://openalex.org/W2498541671","https://openalex.org/W2511744821","https://openalex.org/W2515609553","https://openalex.org/W2544745230","https://openalex.org/W2558992446","https://openalex.org/W2578040266","https://openalex.org/W2578853747","https://openalex.org/W2588828001","https://openalex.org/W2611138580","https://openalex.org/W2626943820","https://openalex.org/W2671458188","https://openalex.org/W2734881787","https://openalex.org/W2736887218","https://openalex.org/W2766206544","https://openalex.org/W2769700967","https://openalex.org/W2774634968","https://openalex.org/W2792594287","https://openalex.org/W2797546805","https://openalex.org/W2800528847","https://openalex.org/W2807526558","https://openalex.org/W2808435053","https://openalex.org/W2809262955","https://openalex.org/W2810304164","https://openalex.org/W2884480429","https://openalex.org/W2884922228","https://openalex.org/W2885531813","https://openalex.org/W2886257261","https://openalex.org/W2889608418","https://openalex.org/W2891858794","https://openalex.org/W2898321887","https://openalex.org/W2901527454","https://openalex.org/W2903362696","https://openalex.org/W2906401896","https://openalex.org/W2909598539","https://openalex.org/W2914368377","https://openalex.org/W2914551013","https://openalex.org/W2915037793","https://openalex.org/W2921789827","https://openalex.org/W2922271872","https://openalex.org/W2942996560","https://openalex.org/W2949603991","https://openalex.org/W2963891150","https://openalex.org/W2972302022","https://openalex.org/W2978281981","https://openalex.org/W2980431614","https://openalex.org/W2982709489","https://openalex.org/W2993454256","https://openalex.org/W2998199029","https://openalex.org/W2999704546","https://openalex.org/W3011459051","https://openalex.org/W3011496738","https://openalex.org/W3011924010","https://openalex.org/W3011975872","https://openalex.org/W3011983244","https://openalex.org/W3016390892","https://openalex.org/W3031010719","https://openalex.org/W3037309616","https://openalex.org/W3041921794","https://openalex.org/W3043487771","https://openalex.org/W3081241948","https://openalex.org/W3087381804","https://openalex.org/W3087397483","https://openalex.org/W3088187805","https://openalex.org/W3101614205","https://openalex.org/W3149393634","https://openalex.org/W4231526733","https://openalex.org/W4237335579","https://openalex.org/W4249468678","https://openalex.org/W6634244330","https://openalex.org/W6675354045","https://openalex.org/W6712604697","https://openalex.org/W6728933153","https://openalex.org/W6768173037"],"related_works":["https://openalex.org/W3150996080","https://openalex.org/W2498134948","https://openalex.org/W3151903987","https://openalex.org/W2005626592","https://openalex.org/W3149538430","https://openalex.org/W2382353027","https://openalex.org/W2324929766","https://openalex.org/W1971640599","https://openalex.org/W4245853730","https://openalex.org/W2119000371"],"abstract_inverted_index":{"Autophagy":[0],"plays":[1],"a":[2,27,85,104,232],"crucial":[3],"role":[4],"in":[5,42,62,153,185,211,226],"maintaining":[6],"cellular":[7],"homeostasis":[8],"through":[9,214],"the":[10,22,36,46,49,54,63,89,108,111,130,133,142,154,162,177,187,192,197,219,222,237],"degradation":[11],"of":[12,24,88,107,113,132,144,164,179,239],"unwanted":[13],"materials":[14],"like":[15,70],"damaged":[16],"mitochondria":[17],"and":[18,92,115,150,182,201],"misfolded":[19],"proteins.":[20],"However,":[21],"contribution":[23],"autophagy":[25,64,78,90,134,155,169,193,213],"toward":[26],"healthy":[28],"cell":[29,81],"environment":[30,56],"is":[31,66,139],"not":[32],"only":[33],"limited":[34],"to":[35,58],"cleaning":[37],"process.":[38,135,156,194],"It":[39],"also":[40,175],"assists":[41],"protein":[43],"synthesis":[44],"when":[45],"system":[47,109,163],"lacks":[48],"amino":[50],"acids'":[51],"inflow":[52],"from":[53],"extracellular":[55],"due":[57],"diet":[59],"consumptions.":[60],"Reduction":[61],"process":[65],"associated":[67],"with":[68,110,205],"diseases":[69],"cancer,":[71],"diabetes,":[72],"non-alcoholic":[73],"steatohepatitis,":[74],"etc.,":[75],"while":[76],"uncontrolled":[77],"may":[79],"facilitate":[80],"death.":[82],"We":[83,173,195,217],"need":[84],"better":[86],"understanding":[87,106],"processes":[91],"their":[93,206],"regulatory":[94,189],"mechanisms":[95],"at":[96],"various":[97],"levels":[98],"(molecules,":[99],"cells,":[100],"tissues).":[101],"This":[102],"demands":[103],"thorough":[105],"help":[112],"mathematical":[114,148,158],"computational":[116,145,215],"tools.":[117],"The":[118],"present":[119],"review":[120],"illuminates":[121],"how":[122],"systems":[123],"biology":[124],"approaches":[125],"are":[126,170,209],"being":[127],"used":[128],"for":[129,167],"study":[131],"A":[136],"comprehensive":[137],"insight":[138,235],"provided":[140],"on":[141,161],"application":[143],"methods":[146],"involving":[147],"modeling":[149],"network":[151,180],"analysis":[152,181],"Various":[157],"models":[159],"based":[160],"differential":[165],"equations":[166],"studying":[168],"covered":[171],"here.":[172],"have":[174],"highlighted":[176],"significance":[178],"machine":[183],"learning":[184],"capturing":[186],"core":[188],"machinery":[190],"governing":[191],"explored":[196],"available":[198],"autophagic":[199],"databases":[200],"related":[202],"resources":[203],"along":[204],"attributes":[207],"that":[208],"useful":[210],"investigating":[212],"methods.":[216],"conclude":[218],"article":[220],"addressing":[221],"potential":[223],"future":[224],"perspective":[225],"this":[227],"area,":[228],"which":[229],"might":[230],"provide":[231],"more":[233],"in-depth":[234],"into":[236],"dynamics":[238],"autophagy.":[240]},"counts_by_year":[{"year":2025,"cited_by_count":2},{"year":2024,"cited_by_count":4},{"year":2023,"cited_by_count":7},{"year":2022,"cited_by_count":3},{"year":2021,"cited_by_count":2}],"updated_date":"2026-05-21T06:26:12.895304","created_date":"2025-10-10T00:00:00"}
