{"id":"https://openalex.org/W3092776600","doi":"https://doi.org/10.1093/bib/bbaa261","title":"Web tools to fight pandemics: the COVID-19 experience","display_name":"Web tools to fight pandemics: the COVID-19 experience","publication_year":2020,"publication_date":"2020-09-14","ids":{"openalex":"https://openalex.org/W3092776600","doi":"https://doi.org/10.1093/bib/bbaa261","mag":"3092776600","pmid":"https://pubmed.ncbi.nlm.nih.gov/33057582"},"language":"en","primary_location":{"id":"doi:10.1093/bib/bbaa261","is_oa":true,"landing_page_url":"https://doi.org/10.1093/bib/bbaa261","pdf_url":"https://academic.oup.com/bib/article-pdf/22/2/690/36654007/bbaa261.pdf","source":{"id":"https://openalex.org/S91767247","display_name":"Briefings in Bioinformatics","issn_l":"1467-5463","issn":["1467-5463","1477-4054"],"is_oa":false,"is_in_doaj":true,"is_core":true,"host_organization":"https://openalex.org/P4310311648","host_organization_name":"Oxford University Press","host_organization_lineage":["https://openalex.org/P4310311648","https://openalex.org/P4310311647"],"host_organization_lineage_names":["Oxford University Press","University of Oxford"],"type":"journal"},"license":"other-oa","license_id":"https://openalex.org/licenses/other-oa","version":"publishedVersion","is_accepted":true,"is_published":true,"raw_source_name":"Briefings in Bioinformatics","raw_type":"journal-article"},"type":"article","indexed_in":["crossref","doaj","pubmed"],"open_access":{"is_oa":true,"oa_status":"hybrid","oa_url":"https://academic.oup.com/bib/article-pdf/22/2/690/36654007/bbaa261.pdf","any_repository_has_fulltext":true},"authorships":[{"author_position":"first","author":{"id":"https://openalex.org/A5034113263","display_name":"Daniele Mercatelli","orcid":"https://orcid.org/0000-0003-3228-0580"},"institutions":[{"id":"https://openalex.org/I9360294","display_name":"University of Bologna","ror":"https://ror.org/01111rn36","country_code":"IT","type":"education","lineage":["https://openalex.org/I9360294"]}],"countries":["IT"],"is_corresponding":false,"raw_author_name":"Daniele Mercatelli","raw_affiliation_strings":["University of Bologna"],"affiliations":[{"raw_affiliation_string":"University of Bologna","institution_ids":["https://openalex.org/I9360294"]}]},{"author_position":"middle","author":{"id":"https://openalex.org/A5029996402","display_name":"Andrew N. Holding","orcid":"https://orcid.org/0000-0002-8459-7048"},"institutions":[{"id":"https://openalex.org/I52099693","display_name":"University of York","ror":"https://ror.org/04m01e293","country_code":"GB","type":"education","lineage":["https://openalex.org/I52099693"]}],"countries":["GB"],"is_corresponding":false,"raw_author_name":"Andrew N Holding","raw_affiliation_strings":["University of York"],"affiliations":[{"raw_affiliation_string":"University of York","institution_ids":["https://openalex.org/I52099693"]}]},{"author_position":"last","author":{"id":"https://openalex.org/A5031461537","display_name":"Federico M. Giorgi","orcid":"https://orcid.org/0000-0002-7325-9908"},"institutions":[{"id":"https://openalex.org/I9360294","display_name":"University of Bologna","ror":"https://ror.org/01111rn36","country_code":"IT","type":"education","lineage":["https://openalex.org/I9360294"]}],"countries":["IT"],"is_corresponding":true,"raw_author_name":"Federico M Giorgi","raw_affiliation_strings":["University of Bologna"],"affiliations":[{"raw_affiliation_string":"University of Bologna","institution_ids":["https://openalex.org/I9360294"]}]}],"institutions":[],"countries_distinct_count":2,"institutions_distinct_count":3,"corresponding_author_ids":["https://openalex.org/A5031461537"],"corresponding_institution_ids":["https://openalex.org/I9360294"],"apc_list":{"value":4011,"currency":"USD","value_usd":4011},"apc_paid":{"value":4011,"currency":"USD","value_usd":4011},"fwci":13.472,"has_fulltext":true,"cited_by_count":48,"citation_normalized_percentile":{"value":0.98701253,"is_in_top_1_percent":false,"is_in_top_10_percent":true},"cited_by_percentile_year":{"min":96,"max":100},"biblio":{"volume":"22","issue":"2","first_page":"690","last_page":"700"},"is_retracted":false,"is_paratext":false,"is_xpac":false,"primary_topic":{"id":"https://openalex.org/T11147","display_name":"Misinformation and Its Impacts","score":0.9828000068664551,"subfield":{"id":"https://openalex.org/subfields/3312","display_name":"Sociology and Political Science"},"field":{"id":"https://openalex.org/fields/33","display_name":"Social Sciences"},"domain":{"id":"https://openalex.org/domains/2","display_name":"Social Sciences"}},"topics":[{"id":"https://openalex.org/T11147","display_name":"Misinformation and Its Impacts","score":0.9828000068664551,"subfield":{"id":"https://openalex.org/subfields/3312","display_name":"Sociology and Political Science"},"field":{"id":"https://openalex.org/fields/33","display_name":"Social Sciences"},"domain":{"id":"https://openalex.org/domains/2","display_name":"Social Sciences"}},{"id":"https://openalex.org/T12576","display_name":"vaccines and immunoinformatics approaches","score":0.9746999740600586,"subfield":{"id":"https://openalex.org/subfields/1312","display_name":"Molecular Biology"},"field":{"id":"https://openalex.org/fields/13","display_name":"Biochemistry, Genetics and Molecular Biology"},"domain":{"id":"https://openalex.org/domains/1","display_name":"Life Sciences"}},{"id":"https://openalex.org/T13937","display_name":"Genetics, Bioinformatics, and Biomedical Research","score":0.9735000133514404,"subfield":{"id":"https://openalex.org/subfields/1312","display_name":"Molecular Biology"},"field":{"id":"https://openalex.org/fields/13","display_name":"Biochemistry, Genetics and Molecular Biology"},"domain":{"id":"https://openalex.org/domains/1","display_name":"Life Sciences"}}],"keywords":[{"id":"https://openalex.org/keywords/coronavirus-disease-2019","display_name":"Coronavirus disease 2019 (COVID-19)","score":0.7907249927520752},{"id":"https://openalex.org/keywords/pandemic","display_name":"Pandemic","score":0.7467625737190247},{"id":"https://openalex.org/keywords/data-science","display_name":"Data science","score":0.6147658228874207},{"id":"https://openalex.org/keywords/web-application","display_name":"Web application","score":0.604388415813446},{"id":"https://openalex.org/keywords/2019-20-coronavirus-outbreak","display_name":"2019-20 coronavirus outbreak","score":0.5937169194221497},{"id":"https://openalex.org/keywords/severe-acute-respiratory-syndrome-coronavirus-2","display_name":"Severe acute respiratory syndrome coronavirus 2 (SARS-CoV-2)","score":0.5792070031166077},{"id":"https://openalex.org/keywords/computer-science","display_name":"Computer science","score":0.5721849799156189},{"id":"https://openalex.org/keywords/order","display_name":"Order (exchange)","score":0.42046573758125305},{"id":"https://openalex.org/keywords/world-wide-web","display_name":"World Wide Web","score":0.39682531356811523},{"id":"https://openalex.org/keywords/outbreak","display_name":"Outbreak","score":0.2673106789588928},{"id":"https://openalex.org/keywords/medicine","display_name":"Medicine","score":0.13599395751953125},{"id":"https://openalex.org/keywords/virology","display_name":"Virology","score":0.1064457893371582},{"id":"https://openalex.org/keywords/infectious-disease","display_name":"Infectious disease (medical specialty)","score":0.09968188405036926}],"concepts":[{"id":"https://openalex.org/C3008058167","wikidata":"https://www.wikidata.org/wiki/Q84263196","display_name":"Coronavirus disease 2019 (COVID-19)","level":4,"score":0.7907249927520752},{"id":"https://openalex.org/C89623803","wikidata":"https://www.wikidata.org/wiki/Q12184","display_name":"Pandemic","level":5,"score":0.7467625737190247},{"id":"https://openalex.org/C2522767166","wikidata":"https://www.wikidata.org/wiki/Q2374463","display_name":"Data science","level":1,"score":0.6147658228874207},{"id":"https://openalex.org/C118643609","wikidata":"https://www.wikidata.org/wiki/Q189210","display_name":"Web application","level":2,"score":0.604388415813446},{"id":"https://openalex.org/C3006700255","wikidata":"https://www.wikidata.org/wiki/Q81068910","display_name":"2019-20 coronavirus outbreak","level":3,"score":0.5937169194221497},{"id":"https://openalex.org/C3007834351","wikidata":"https://www.wikidata.org/wiki/Q82069695","display_name":"Severe acute respiratory syndrome coronavirus 2 (SARS-CoV-2)","level":5,"score":0.5792070031166077},{"id":"https://openalex.org/C41008148","wikidata":"https://www.wikidata.org/wiki/Q21198","display_name":"Computer science","level":0,"score":0.5721849799156189},{"id":"https://openalex.org/C182306322","wikidata":"https://www.wikidata.org/wiki/Q1779371","display_name":"Order (exchange)","level":2,"score":0.42046573758125305},{"id":"https://openalex.org/C136764020","wikidata":"https://www.wikidata.org/wiki/Q466","display_name":"World Wide Web","level":1,"score":0.39682531356811523},{"id":"https://openalex.org/C116675565","wikidata":"https://www.wikidata.org/wiki/Q3241045","display_name":"Outbreak","level":2,"score":0.2673106789588928},{"id":"https://openalex.org/C71924100","wikidata":"https://www.wikidata.org/wiki/Q11190","display_name":"Medicine","level":0,"score":0.13599395751953125},{"id":"https://openalex.org/C159047783","wikidata":"https://www.wikidata.org/wiki/Q7215","display_name":"Virology","level":1,"score":0.1064457893371582},{"id":"https://openalex.org/C524204448","wikidata":"https://www.wikidata.org/wiki/Q788926","display_name":"Infectious disease (medical specialty)","level":3,"score":0.09968188405036926},{"id":"https://openalex.org/C2779134260","wikidata":"https://www.wikidata.org/wiki/Q12136","display_name":"Disease","level":2,"score":0.0},{"id":"https://openalex.org/C162324750","wikidata":"https://www.wikidata.org/wiki/Q8134","display_name":"Economics","level":0,"score":0.0},{"id":"https://openalex.org/C142724271","wikidata":"https://www.wikidata.org/wiki/Q7208","display_name":"Pathology","level":1,"score":0.0},{"id":"https://openalex.org/C10138342","wikidata":"https://www.wikidata.org/wiki/Q43015","display_name":"Finance","level":1,"score":0.0}],"mesh":[{"descriptor_ui":"D000086382","descriptor_name":"COVID-19","qualifier_ui":"Q000517","qualifier_name":"prevention & control","is_major_topic":false},{"descriptor_ui":"D000086382","descriptor_name":"COVID-19","qualifier_ui":"Q000517","qualifier_name":"prevention & control","is_major_topic":false},{"descriptor_ui":"D000086382","descriptor_name":"COVID-19","qualifier_ui":"Q000517","qualifier_name":"prevention & control","is_major_topic":false},{"descriptor_ui":"D000086382","descriptor_name":"COVID-19","qualifier_ui":"Q000821","qualifier_name":"virology","is_major_topic":false},{"descriptor_ui":"D000086382","descriptor_name":"COVID-19","qualifier_ui":"Q000821","qualifier_name":"virology","is_major_topic":false},{"descriptor_ui":"D000086382","descriptor_name":"COVID-19","qualifier_ui":"Q000821","qualifier_name":"virology","is_major_topic":false},{"descriptor_ui":"D000086402","descriptor_name":"SARS-CoV-2","qualifier_ui":"Q000302","qualifier_name":"isolation & purification","is_major_topic":false},{"descriptor_ui":"D000086402","descriptor_name":"SARS-CoV-2","qualifier_ui":"Q000302","qualifier_name":"isolation & purification","is_major_topic":false},{"descriptor_ui":"D000086402","descriptor_name":"SARS-CoV-2","qualifier_ui":"Q000302","qualifier_name":"isolation & purification","is_major_topic":false},{"descriptor_ui":"D006801","descriptor_name":"Humans","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D006801","descriptor_name":"Humans","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D006801","descriptor_name":"Humans","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D019295","descriptor_name":"Computational Biology","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D019295","descriptor_name":"Computational Biology","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D019295","descriptor_name":"Computational Biology","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D020407","descriptor_name":"Internet","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D020407","descriptor_name":"Internet","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D020407","descriptor_name":"Internet","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D058873","descriptor_name":"Pandemics","qualifier_ui":null,"qualifier_name":null,"is_major_topic":true},{"descriptor_ui":"D058873","descriptor_name":"Pandemics","qualifier_ui":null,"qualifier_name":null,"is_major_topic":true},{"descriptor_ui":"D058873","descriptor_name":"Pandemics","qualifier_ui":null,"qualifier_name":null,"is_major_topic":true}],"locations_count":5,"locations":[{"id":"doi:10.1093/bib/bbaa261","is_oa":true,"landing_page_url":"https://doi.org/10.1093/bib/bbaa261","pdf_url":"https://academic.oup.com/bib/article-pdf/22/2/690/36654007/bbaa261.pdf","source":{"id":"https://openalex.org/S91767247","display_name":"Briefings in Bioinformatics","issn_l":"1467-5463","issn":["1467-5463","1477-4054"],"is_oa":false,"is_in_doaj":true,"is_core":true,"host_organization":"https://openalex.org/P4310311648","host_organization_name":"Oxford University Press","host_organization_lineage":["https://openalex.org/P4310311648","https://openalex.org/P4310311647"],"host_organization_lineage_names":["Oxford University Press","University of Oxford"],"type":"journal"},"license":"other-oa","license_id":"https://openalex.org/licenses/other-oa","version":"publishedVersion","is_accepted":true,"is_published":true,"raw_source_name":"Briefings in Bioinformatics","raw_type":"journal-article"},{"id":"pmid:33057582","is_oa":false,"landing_page_url":"https://pubmed.ncbi.nlm.nih.gov/33057582","pdf_url":null,"source":{"id":"https://openalex.org/S4306525036","display_name":"PubMed","issn_l":null,"issn":null,"is_oa":false,"is_in_doaj":false,"is_core":false,"host_organization":"https://openalex.org/I1299303238","host_organization_name":"National Institutes of Health","host_organization_lineage":["https://openalex.org/I1299303238"],"host_organization_lineage_names":[],"type":"repository"},"license":null,"license_id":null,"version":"publishedVersion","is_accepted":true,"is_published":true,"raw_source_name":"Briefings in bioinformatics","raw_type":null},{"id":"pmh:oai:eprints.whiterose.ac.uk:175842","is_oa":true,"landing_page_url":"https://orcid.org/0000-0002-8459-7048>","pdf_url":"https://eprints.whiterose.ac.uk/175842/1/bbaa261.pdf","source":{"id":"https://openalex.org/S4306400854","display_name":"White Rose Research Online (University of Leeds, The University of Sheffield, University of York)","issn_l":null,"issn":null,"is_oa":false,"is_in_doaj":false,"is_core":false,"host_organization":"https://openalex.org/I2800616092","host_organization_name":"White Rose University Consortium","host_organization_lineage":["https://openalex.org/I2800616092"],"host_organization_lineage_names":[],"type":"repository"},"license":"other-oa","license_id":"https://openalex.org/licenses/other-oa","version":"acceptedVersion","is_accepted":true,"is_published":false,"raw_source_name":null,"raw_type":"PeerReviewed"},{"id":"pmh:oai:cris.unibo.it:11585/778103","is_oa":false,"landing_page_url":"https://hdl.handle.net/11585/778103","pdf_url":null,"source":{"id":"https://openalex.org/S4306402579","display_name":"Archivio istituzionale della ricerca (Alma Mater Studiorum Universit\u00e0 di Bologna)","issn_l":null,"issn":null,"is_oa":false,"is_in_doaj":false,"is_core":false,"host_organization":"https://openalex.org/I4210117483","host_organization_name":"Istituto di Ematologia di Bologna","host_organization_lineage":["https://openalex.org/I4210117483"],"host_organization_lineage_names":[],"type":"repository"},"license":null,"license_id":null,"version":"submittedVersion","is_accepted":false,"is_published":false,"raw_source_name":null,"raw_type":"info:eu-repo/semantics/article"},{"id":"pmh:oai:pubmedcentral.nih.gov:7665357","is_oa":true,"landing_page_url":"https://www.ncbi.nlm.nih.gov/pmc/articles/7665357","pdf_url":null,"source":{"id":"https://openalex.org/S2764455111","display_name":"PubMed Central","issn_l":null,"issn":null,"is_oa":false,"is_in_doaj":false,"is_core":false,"host_organization":"https://openalex.org/I1299303238","host_organization_name":"National Institutes of Health","host_organization_lineage":["https://openalex.org/I1299303238"],"host_organization_lineage_names":[],"type":"repository"},"license":null,"license_id":null,"version":"submittedVersion","is_accepted":false,"is_published":false,"raw_source_name":"Brief Bioinform","raw_type":"Text"}],"best_oa_location":{"id":"doi:10.1093/bib/bbaa261","is_oa":true,"landing_page_url":"https://doi.org/10.1093/bib/bbaa261","pdf_url":"https://academic.oup.com/bib/article-pdf/22/2/690/36654007/bbaa261.pdf","source":{"id":"https://openalex.org/S91767247","display_name":"Briefings in Bioinformatics","issn_l":"1467-5463","issn":["1467-5463","1477-4054"],"is_oa":false,"is_in_doaj":true,"is_core":true,"host_organization":"https://openalex.org/P4310311648","host_organization_name":"Oxford University Press","host_organization_lineage":["https://openalex.org/P4310311648","https://openalex.org/P4310311647"],"host_organization_lineage_names":["Oxford University Press","University of Oxford"],"type":"journal"},"license":"other-oa","license_id":"https://openalex.org/licenses/other-oa","version":"publishedVersion","is_accepted":true,"is_published":true,"raw_source_name":"Briefings in Bioinformatics","raw_type":"journal-article"},"sustainable_development_goals":[{"id":"https://metadata.un.org/sdg/3","score":0.8100000023841858,"display_name":"Good health and well-being"}],"awards":[],"funders":[],"has_content":{"grobid_xml":true,"pdf":true},"content_urls":{"pdf":"https://content.openalex.org/works/W3092776600.pdf","grobid_xml":"https://content.openalex.org/works/W3092776600.grobid-xml"},"referenced_works_count":72,"referenced_works":["https://openalex.org/W1973094248","https://openalex.org/W1977532419","https://openalex.org/W2009269401","https://openalex.org/W2034213449","https://openalex.org/W2063651055","https://openalex.org/W2075715210","https://openalex.org/W2168637722","https://openalex.org/W2411891913","https://openalex.org/W2474747771","https://openalex.org/W2560057613","https://openalex.org/W2605343262","https://openalex.org/W2767891136","https://openalex.org/W2883654123","https://openalex.org/W2902664755","https://openalex.org/W2903181389","https://openalex.org/W2914060790","https://openalex.org/W2952045272","https://openalex.org/W2970491619","https://openalex.org/W2996377321","https://openalex.org/W3003217347","https://openalex.org/W3004499272","https://openalex.org/W3008443627","https://openalex.org/W3009912996","https://openalex.org/W3011072970","https://openalex.org/W3011392786","https://openalex.org/W3012919899","https://openalex.org/W3013395653","https://openalex.org/W3013749407","https://openalex.org/W3014604938","https://openalex.org/W3015259591","https://openalex.org/W3015371627","https://openalex.org/W3015403044","https://openalex.org/W3016219791","https://openalex.org/W3016441544","https://openalex.org/W3016885747","https://openalex.org/W3020575652","https://openalex.org/W3021219695","https://openalex.org/W3021283406","https://openalex.org/W3021922824","https://openalex.org/W3022285953","https://openalex.org/W3022405684","https://openalex.org/W3022687324","https://openalex.org/W3023494626","https://openalex.org/W3024987072","https://openalex.org/W3027147731","https://openalex.org/W3031054394","https://openalex.org/W3031158290","https://openalex.org/W3032355258","https://openalex.org/W3033518790","https://openalex.org/W3035689202","https://openalex.org/W3035920796","https://openalex.org/W3036113864","https://openalex.org/W3036778916","https://openalex.org/W3036953642","https://openalex.org/W3040585768","https://openalex.org/W3042953920","https://openalex.org/W3043124965","https://openalex.org/W3043379468","https://openalex.org/W3043927884","https://openalex.org/W3078354316","https://openalex.org/W3081626042","https://openalex.org/W3102648521","https://openalex.org/W3103187010","https://openalex.org/W3104938080","https://openalex.org/W4211049540","https://openalex.org/W6774633320","https://openalex.org/W6775261456","https://openalex.org/W6775726577","https://openalex.org/W6776972316","https://openalex.org/W6779119613","https://openalex.org/W6779882118","https://openalex.org/W6785434027"],"related_works":["https://openalex.org/W3036314732","https://openalex.org/W3009669391","https://openalex.org/W4382894326","https://openalex.org/W3198183218","https://openalex.org/W3171943759","https://openalex.org/W3176864053","https://openalex.org/W4206669628","https://openalex.org/W4292098121","https://openalex.org/W3154141118","https://openalex.org/W4388896133"],"abstract_inverted_index":{"The":[0],"current":[1,93],"outbreak":[2],"of":[3,15,18,40,51,78,91,95,98],"COVID-19":[4,63,99],"has":[5],"generated":[6],"an":[7],"unprecedented":[8],"scientific":[9],"response":[10],"worldwide,":[11],"with":[12,37],"the":[13,38,49,56,76,92,96],"generation":[14],"vast":[16],"amounts":[17],"publicly":[19],"available":[20],"epidemiological,":[21],"biological":[22],"and":[23,65,82],"clinical":[24],"data.":[25,43],"Bioinformatics":[26],"scientists":[27],"have":[28],"quickly":[29],"produced":[30],"online":[31,100],"methods":[32],"to":[33,86],"provide":[34,87],"non-computational":[35],"users":[36],"opportunity":[39],"analyzing":[41],"such":[42],"In":[44],"this":[45,52],"review,":[46],"we":[47],"report":[48],"results":[50],"effort,":[53],"by":[54],"cataloguing":[55],"currently":[57],"most":[58],"popular":[59],"web":[60],"tools":[61,72],"for":[62],"research":[64],"analysis.":[66],"Our":[67],"focus":[68],"was":[69],"driven":[70],"on":[71],"drawing":[73],"data":[74],"from":[75],"fields":[77],"epidemiology,":[79],"genomics,":[80],"interactomics":[81],"pharmacology,":[83],"in":[84],"order":[85],"a":[88],"meaningful":[89],"depiction":[90],"state":[94],"art":[97],"resources.":[101]},"counts_by_year":[{"year":2025,"cited_by_count":4},{"year":2024,"cited_by_count":7},{"year":2023,"cited_by_count":10},{"year":2022,"cited_by_count":8},{"year":2021,"cited_by_count":16},{"year":2020,"cited_by_count":3}],"updated_date":"2026-04-05T17:49:38.594831","created_date":"2025-10-10T00:00:00"}
