{"id":"https://openalex.org/W3087245954","doi":"https://doi.org/10.1093/bib/bbaa204","title":"Deep learning meets metabolomics: a methodological perspective","display_name":"Deep learning meets metabolomics: a methodological perspective","publication_year":2020,"publication_date":"2020-08-11","ids":{"openalex":"https://openalex.org/W3087245954","doi":"https://doi.org/10.1093/bib/bbaa204","mag":"3087245954","pmid":"https://pubmed.ncbi.nlm.nih.gov/32940335"},"language":"en","primary_location":{"id":"doi:10.1093/bib/bbaa204","is_oa":false,"landing_page_url":"https://doi.org/10.1093/bib/bbaa204","pdf_url":null,"source":{"id":"https://openalex.org/S91767247","display_name":"Briefings in Bioinformatics","issn_l":"1467-5463","issn":["1467-5463","1477-4054"],"is_oa":false,"is_in_doaj":true,"is_core":true,"host_organization":"https://openalex.org/P4310311648","host_organization_name":"Oxford University Press","host_organization_lineage":["https://openalex.org/P4310311648","https://openalex.org/P4310311647"],"host_organization_lineage_names":["Oxford University Press","University of Oxford"],"type":"journal"},"license":null,"license_id":null,"version":"publishedVersion","is_accepted":true,"is_published":true,"raw_source_name":"Briefings in Bioinformatics","raw_type":"journal-article"},"type":"article","indexed_in":["crossref","doaj","pubmed"],"open_access":{"is_oa":false,"oa_status":"closed","oa_url":null,"any_repository_has_fulltext":false},"authorships":[{"author_position":"first","author":{"id":"https://openalex.org/A5008523423","display_name":"Partho Sen","orcid":"https://orcid.org/0000-0003-0475-2763"},"institutions":[{"id":"https://openalex.org/I130217899","display_name":"\u00c5bo Akademi University","ror":"https://ror.org/029pk6x14","country_code":"FI","type":"education","lineage":["https://openalex.org/I130217899"]},{"id":"https://openalex.org/I155660961","display_name":"University of Turku","ror":"https://ror.org/05vghhr25","country_code":"FI","type":"education","lineage":["https://openalex.org/I155660961"]},{"id":"https://openalex.org/I183173800","display_name":"Turku Centre for Computer Science","ror":"https://ror.org/00vy7ed73","country_code":"FI","type":"facility","lineage":["https://openalex.org/I130217899","https://openalex.org/I155660961","https://openalex.org/I183173800"]},{"id":"https://openalex.org/I26437253","display_name":"\u00d6rebro University","ror":"https://ror.org/05kytsw45","country_code":"SE","type":"education","lineage":["https://openalex.org/I26437253"]}],"countries":["FI","SE"],"is_corresponding":true,"raw_author_name":"Partho Sen","raw_affiliation_strings":["School of Medical Sciences, \u00d6rebro University, 702 81 \u00d6rebro, Sweden","Turku Bioscience Centre, University of Turku and \u00c5bo Akademi University, 20520 Turku, Finland"],"affiliations":[{"raw_affiliation_string":"School of Medical Sciences, \u00d6rebro University, 702 81 \u00d6rebro, Sweden","institution_ids":["https://openalex.org/I26437253"]},{"raw_affiliation_string":"Turku Bioscience Centre, University of Turku and \u00c5bo Akademi University, 20520 Turku, Finland","institution_ids":["https://openalex.org/I183173800","https://openalex.org/I155660961","https://openalex.org/I130217899"]}]},{"author_position":"middle","author":{"id":"https://openalex.org/A5044964332","display_name":"Santosh Lamichhane","orcid":"https://orcid.org/0000-0002-9292-3595"},"institutions":[{"id":"https://openalex.org/I130217899","display_name":"\u00c5bo Akademi University","ror":"https://ror.org/029pk6x14","country_code":"FI","type":"education","lineage":["https://openalex.org/I130217899"]},{"id":"https://openalex.org/I155660961","display_name":"University of Turku","ror":"https://ror.org/05vghhr25","country_code":"FI","type":"education","lineage":["https://openalex.org/I155660961"]},{"id":"https://openalex.org/I183173800","display_name":"Turku Centre for Computer Science","ror":"https://ror.org/00vy7ed73","country_code":"FI","type":"facility","lineage":["https://openalex.org/I130217899","https://openalex.org/I155660961","https://openalex.org/I183173800"]}],"countries":["FI"],"is_corresponding":false,"raw_author_name":"Santosh Lamichhane","raw_affiliation_strings":["Turku Bioscience Centre, University of Turku and \u00c5bo Akademi University, 20520 Turku, Finland"],"affiliations":[{"raw_affiliation_string":"Turku Bioscience Centre, University of Turku and \u00c5bo Akademi University, 20520 Turku, Finland","institution_ids":["https://openalex.org/I183173800","https://openalex.org/I155660961","https://openalex.org/I130217899"]}]},{"author_position":"middle","author":{"id":"https://openalex.org/A5020039833","display_name":"Vivek Bhakta Mathema","orcid":"https://orcid.org/0000-0003-3916-9949"},"institutions":[{"id":"https://openalex.org/I1332387789","display_name":"Siriraj Hospital","ror":"https://ror.org/0331zs648","country_code":"TH","type":"healthcare","lineage":["https://openalex.org/I1332387789"]},{"id":"https://openalex.org/I25399158","display_name":"Mahidol University","ror":"https://ror.org/01znkr924","country_code":"TH","type":"education","lineage":["https://openalex.org/I25399158"]}],"countries":["TH"],"is_corresponding":false,"raw_author_name":"Vivek B Mathema","raw_affiliation_strings":["Metabolomics and Systems Biology, Department of Biochemistry, and Siriraj Metabolomics and Phenomics Center, Faculty of Medicine Siriraj Hospital, Mahidol University, Bangkok 10700, Thailand"],"affiliations":[{"raw_affiliation_string":"Metabolomics and Systems Biology, Department of Biochemistry, and Siriraj Metabolomics and Phenomics Center, Faculty of Medicine Siriraj Hospital, Mahidol University, Bangkok 10700, Thailand","institution_ids":["https://openalex.org/I1332387789","https://openalex.org/I25399158"]}]},{"author_position":"middle","author":{"id":"https://openalex.org/A5078886010","display_name":"Aidan McGlinchey","orcid":"https://orcid.org/0000-0001-6682-6030"},"institutions":[{"id":"https://openalex.org/I26437253","display_name":"\u00d6rebro University","ror":"https://ror.org/05kytsw45","country_code":"SE","type":"education","lineage":["https://openalex.org/I26437253"]}],"countries":["SE"],"is_corresponding":false,"raw_author_name":"Aidan McGlinchey","raw_affiliation_strings":["School of Medical Sciences, \u00d6rebro University, 702 81 \u00d6rebro, Sweden"],"affiliations":[{"raw_affiliation_string":"School of Medical Sciences, \u00d6rebro University, 702 81 \u00d6rebro, Sweden","institution_ids":["https://openalex.org/I26437253"]}]},{"author_position":"middle","author":{"id":"https://openalex.org/A5014301291","display_name":"Alex M. Dickens","orcid":"https://orcid.org/0000-0002-3178-8449"},"institutions":[{"id":"https://openalex.org/I130217899","display_name":"\u00c5bo Akademi University","ror":"https://ror.org/029pk6x14","country_code":"FI","type":"education","lineage":["https://openalex.org/I130217899"]},{"id":"https://openalex.org/I155660961","display_name":"University of Turku","ror":"https://ror.org/05vghhr25","country_code":"FI","type":"education","lineage":["https://openalex.org/I155660961"]},{"id":"https://openalex.org/I183173800","display_name":"Turku Centre for Computer Science","ror":"https://ror.org/00vy7ed73","country_code":"FI","type":"facility","lineage":["https://openalex.org/I130217899","https://openalex.org/I155660961","https://openalex.org/I183173800"]}],"countries":["FI"],"is_corresponding":false,"raw_author_name":"Alex M Dickens","raw_affiliation_strings":["Turku Bioscience Centre, University of Turku and \u00c5bo Akademi University, 20520 Turku, Finland"],"affiliations":[{"raw_affiliation_string":"Turku Bioscience Centre, University of Turku and \u00c5bo Akademi University, 20520 Turku, Finland","institution_ids":["https://openalex.org/I183173800","https://openalex.org/I155660961","https://openalex.org/I130217899"]}]},{"author_position":"middle","author":{"id":"https://openalex.org/A5049415271","display_name":"Sakda Khoomrung","orcid":"https://orcid.org/0000-0001-9461-8597"},"institutions":[{"id":"https://openalex.org/I1332387789","display_name":"Siriraj Hospital","ror":"https://ror.org/0331zs648","country_code":"TH","type":"healthcare","lineage":["https://openalex.org/I1332387789"]},{"id":"https://openalex.org/I25399158","display_name":"Mahidol University","ror":"https://ror.org/01znkr924","country_code":"TH","type":"education","lineage":["https://openalex.org/I25399158"]}],"countries":["TH"],"is_corresponding":false,"raw_author_name":"Sakda Khoomrung","raw_affiliation_strings":["Center for Innovation in Chemistry (PERCH), Faculty of Science, Mahidol University, Rama 6 Road, Bangkok 10400, Thailand","Metabolomics and Systems Biology, Department of Biochemistry, and Siriraj Metabolomics and Phenomics Center, Faculty of Medicine Siriraj Hospital, Mahidol University, Bangkok 10700, Thailand"],"affiliations":[{"raw_affiliation_string":"Center for Innovation in Chemistry (PERCH), Faculty of Science, Mahidol University, Rama 6 Road, Bangkok 10400, Thailand","institution_ids":["https://openalex.org/I25399158"]},{"raw_affiliation_string":"Metabolomics and Systems Biology, Department of Biochemistry, and Siriraj Metabolomics and Phenomics Center, Faculty of Medicine Siriraj Hospital, Mahidol University, Bangkok 10700, Thailand","institution_ids":["https://openalex.org/I1332387789","https://openalex.org/I25399158"]}]},{"author_position":"last","author":{"id":"https://openalex.org/A5083895460","display_name":"Matej Ore\u0161i\u010d","orcid":"https://orcid.org/0000-0002-2856-9165"},"institutions":[{"id":"https://openalex.org/I130217899","display_name":"\u00c5bo Akademi University","ror":"https://ror.org/029pk6x14","country_code":"FI","type":"education","lineage":["https://openalex.org/I130217899"]},{"id":"https://openalex.org/I155660961","display_name":"University of Turku","ror":"https://ror.org/05vghhr25","country_code":"FI","type":"education","lineage":["https://openalex.org/I155660961"]},{"id":"https://openalex.org/I183173800","display_name":"Turku Centre for Computer Science","ror":"https://ror.org/00vy7ed73","country_code":"FI","type":"facility","lineage":["https://openalex.org/I130217899","https://openalex.org/I155660961","https://openalex.org/I183173800"]},{"id":"https://openalex.org/I26437253","display_name":"\u00d6rebro University","ror":"https://ror.org/05kytsw45","country_code":"SE","type":"education","lineage":["https://openalex.org/I26437253"]}],"countries":["FI","SE"],"is_corresponding":false,"raw_author_name":"Matej Ore\u0161i\u010d","raw_affiliation_strings":["School of Medical Sciences, \u00d6rebro University, 702 81 \u00d6rebro, Sweden","Turku Bioscience Centre, University of Turku and \u00c5bo Akademi University, 20520 Turku, Finland"],"affiliations":[{"raw_affiliation_string":"School of Medical Sciences, \u00d6rebro University, 702 81 \u00d6rebro, Sweden","institution_ids":["https://openalex.org/I26437253"]},{"raw_affiliation_string":"Turku Bioscience Centre, University of Turku and \u00c5bo Akademi University, 20520 Turku, Finland","institution_ids":["https://openalex.org/I183173800","https://openalex.org/I155660961","https://openalex.org/I130217899"]}]}],"institutions":[],"countries_distinct_count":3,"institutions_distinct_count":7,"corresponding_author_ids":["https://openalex.org/A5008523423"],"corresponding_institution_ids":["https://openalex.org/I130217899","https://openalex.org/I155660961","https://openalex.org/I183173800","https://openalex.org/I26437253"],"apc_list":{"value":4011,"currency":"USD","value_usd":4011},"apc_paid":null,"fwci":5.8503,"has_fulltext":false,"cited_by_count":119,"citation_normalized_percentile":{"value":0.97308274,"is_in_top_1_percent":false,"is_in_top_10_percent":true},"cited_by_percentile_year":{"min":96,"max":100},"biblio":{"volume":"22","issue":"2","first_page":"1531","last_page":"1542"},"is_retracted":false,"is_paratext":false,"is_xpac":false,"primary_topic":{"id":"https://openalex.org/T10836","display_name":"Metabolomics and Mass Spectrometry Studies","score":0.9998000264167786,"subfield":{"id":"https://openalex.org/subfields/1312","display_name":"Molecular Biology"},"field":{"id":"https://openalex.org/fields/13","display_name":"Biochemistry, Genetics and Molecular Biology"},"domain":{"id":"https://openalex.org/domains/1","display_name":"Life Sciences"}},"topics":[{"id":"https://openalex.org/T10836","display_name":"Metabolomics and Mass Spectrometry Studies","score":0.9998000264167786,"subfield":{"id":"https://openalex.org/subfields/1312","display_name":"Molecular Biology"},"field":{"id":"https://openalex.org/fields/13","display_name":"Biochemistry, Genetics and Molecular Biology"},"domain":{"id":"https://openalex.org/domains/1","display_name":"Life Sciences"}},{"id":"https://openalex.org/T10887","display_name":"Bioinformatics and Genomic Networks","score":0.9348999857902527,"subfield":{"id":"https://openalex.org/subfields/1312","display_name":"Molecular Biology"},"field":{"id":"https://openalex.org/fields/13","display_name":"Biochemistry, Genetics and Molecular Biology"},"domain":{"id":"https://openalex.org/domains/1","display_name":"Life Sciences"}},{"id":"https://openalex.org/T12647","display_name":"Traditional Chinese Medicine Studies","score":0.930899977684021,"subfield":{"id":"https://openalex.org/subfields/2707","display_name":"Complementary and alternative medicine"},"field":{"id":"https://openalex.org/fields/27","display_name":"Medicine"},"domain":{"id":"https://openalex.org/domains/4","display_name":"Health Sciences"}}],"keywords":[{"id":"https://openalex.org/keywords/metabolomics","display_name":"Metabolomics","score":0.8529316782951355},{"id":"https://openalex.org/keywords/computer-science","display_name":"Computer science","score":0.6612445116043091},{"id":"https://openalex.org/keywords/big-data","display_name":"Big data","score":0.6427555084228516},{"id":"https://openalex.org/keywords/inference","display_name":"Inference","score":0.6377017498016357},{"id":"https://openalex.org/keywords/data-science","display_name":"Data science","score":0.6082946062088013},{"id":"https://openalex.org/keywords/identification","display_name":"Identification (biology)","score":0.5522416234016418},{"id":"https://openalex.org/keywords/variety","display_name":"Variety (cybernetics)","score":0.47892603278160095},{"id":"https://openalex.org/keywords/artificial-intelligence","display_name":"Artificial intelligence","score":0.4749488830566406},{"id":"https://openalex.org/keywords/biomarker-discovery","display_name":"Biomarker discovery","score":0.45959529280662537},{"id":"https://openalex.org/keywords/relevance","display_name":"Relevance (law)","score":0.4180169701576233},{"id":"https://openalex.org/keywords/machine-learning","display_name":"Machine learning","score":0.3914545774459839},{"id":"https://openalex.org/keywords/data-mining","display_name":"Data mining","score":0.2538250684738159},{"id":"https://openalex.org/keywords/bioinformatics","display_name":"Bioinformatics","score":0.24260932207107544},{"id":"https://openalex.org/keywords/biology","display_name":"Biology","score":0.12981370091438293},{"id":"https://openalex.org/keywords/proteomics","display_name":"Proteomics","score":0.09343954920768738}],"concepts":[{"id":"https://openalex.org/C21565614","wikidata":"https://www.wikidata.org/wiki/Q12149006","display_name":"Metabolomics","level":2,"score":0.8529316782951355},{"id":"https://openalex.org/C41008148","wikidata":"https://www.wikidata.org/wiki/Q21198","display_name":"Computer science","level":0,"score":0.6612445116043091},{"id":"https://openalex.org/C75684735","wikidata":"https://www.wikidata.org/wiki/Q858810","display_name":"Big data","level":2,"score":0.6427555084228516},{"id":"https://openalex.org/C2776214188","wikidata":"https://www.wikidata.org/wiki/Q408386","display_name":"Inference","level":2,"score":0.6377017498016357},{"id":"https://openalex.org/C2522767166","wikidata":"https://www.wikidata.org/wiki/Q2374463","display_name":"Data science","level":1,"score":0.6082946062088013},{"id":"https://openalex.org/C116834253","wikidata":"https://www.wikidata.org/wiki/Q2039217","display_name":"Identification (biology)","level":2,"score":0.5522416234016418},{"id":"https://openalex.org/C136197465","wikidata":"https://www.wikidata.org/wiki/Q1729295","display_name":"Variety (cybernetics)","level":2,"score":0.47892603278160095},{"id":"https://openalex.org/C154945302","wikidata":"https://www.wikidata.org/wiki/Q11660","display_name":"Artificial intelligence","level":1,"score":0.4749488830566406},{"id":"https://openalex.org/C124535831","wikidata":"https://www.wikidata.org/wiki/Q4915074","display_name":"Biomarker discovery","level":4,"score":0.45959529280662537},{"id":"https://openalex.org/C158154518","wikidata":"https://www.wikidata.org/wiki/Q7310970","display_name":"Relevance (law)","level":2,"score":0.4180169701576233},{"id":"https://openalex.org/C119857082","wikidata":"https://www.wikidata.org/wiki/Q2539","display_name":"Machine learning","level":1,"score":0.3914545774459839},{"id":"https://openalex.org/C124101348","wikidata":"https://www.wikidata.org/wiki/Q172491","display_name":"Data mining","level":1,"score":0.2538250684738159},{"id":"https://openalex.org/C60644358","wikidata":"https://www.wikidata.org/wiki/Q128570","display_name":"Bioinformatics","level":1,"score":0.24260932207107544},{"id":"https://openalex.org/C86803240","wikidata":"https://www.wikidata.org/wiki/Q420","display_name":"Biology","level":0,"score":0.12981370091438293},{"id":"https://openalex.org/C46111723","wikidata":"https://www.wikidata.org/wiki/Q471857","display_name":"Proteomics","level":3,"score":0.09343954920768738},{"id":"https://openalex.org/C104317684","wikidata":"https://www.wikidata.org/wiki/Q7187","display_name":"Gene","level":2,"score":0.0},{"id":"https://openalex.org/C17744445","wikidata":"https://www.wikidata.org/wiki/Q36442","display_name":"Political science","level":0,"score":0.0},{"id":"https://openalex.org/C59822182","wikidata":"https://www.wikidata.org/wiki/Q441","display_name":"Botany","level":1,"score":0.0},{"id":"https://openalex.org/C55493867","wikidata":"https://www.wikidata.org/wiki/Q7094","display_name":"Biochemistry","level":1,"score":0.0},{"id":"https://openalex.org/C199539241","wikidata":"https://www.wikidata.org/wiki/Q7748","display_name":"Law","level":1,"score":0.0}],"mesh":[{"descriptor_ui":"D000077321","descriptor_name":"Deep Learning","qualifier_ui":null,"qualifier_name":null,"is_major_topic":true},{"descriptor_ui":"D000077321","descriptor_name":"Deep Learning","qualifier_ui":null,"qualifier_name":null,"is_major_topic":true},{"descriptor_ui":"D000077321","descriptor_name":"Deep Learning","qualifier_ui":null,"qualifier_name":null,"is_major_topic":true},{"descriptor_ui":"D005260","descriptor_name":"Female","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D005260","descriptor_name":"Female","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D005260","descriptor_name":"Female","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D006801","descriptor_name":"Humans","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D006801","descriptor_name":"Humans","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D006801","descriptor_name":"Humans","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D011247","descriptor_name":"Pregnancy","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D011247","descriptor_name":"Pregnancy","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D011247","descriptor_name":"Pregnancy","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D055432","descriptor_name":"Metabolomics","qualifier_ui":null,"qualifier_name":null,"is_major_topic":true},{"descriptor_ui":"D055432","descriptor_name":"Metabolomics","qualifier_ui":null,"qualifier_name":null,"is_major_topic":true},{"descriptor_ui":"D055432","descriptor_name":"Metabolomics","qualifier_ui":null,"qualifier_name":null,"is_major_topic":true},{"descriptor_ui":"D066264","descriptor_name":"Datasets as Topic","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D066264","descriptor_name":"Datasets as Topic","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D066264","descriptor_name":"Datasets as Topic","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false}],"locations_count":2,"locations":[{"id":"doi:10.1093/bib/bbaa204","is_oa":false,"landing_page_url":"https://doi.org/10.1093/bib/bbaa204","pdf_url":null,"source":{"id":"https://openalex.org/S91767247","display_name":"Briefings in Bioinformatics","issn_l":"1467-5463","issn":["1467-5463","1477-4054"],"is_oa":false,"is_in_doaj":true,"is_core":true,"host_organization":"https://openalex.org/P4310311648","host_organization_name":"Oxford University Press","host_organization_lineage":["https://openalex.org/P4310311648","https://openalex.org/P4310311647"],"host_organization_lineage_names":["Oxford University Press","University of Oxford"],"type":"journal"},"license":null,"license_id":null,"version":"publishedVersion","is_accepted":true,"is_published":true,"raw_source_name":"Briefings in Bioinformatics","raw_type":"journal-article"},{"id":"pmid:32940335","is_oa":false,"landing_page_url":"https://pubmed.ncbi.nlm.nih.gov/32940335","pdf_url":null,"source":{"id":"https://openalex.org/S4306525036","display_name":"PubMed","issn_l":null,"issn":null,"is_oa":false,"is_in_doaj":false,"is_core":false,"host_organization":"https://openalex.org/I1299303238","host_organization_name":"National Institutes of Health","host_organization_lineage":["https://openalex.org/I1299303238"],"host_organization_lineage_names":[],"type":"repository"},"license":null,"license_id":null,"version":"publishedVersion","is_accepted":true,"is_published":true,"raw_source_name":"Briefings in bioinformatics","raw_type":null}],"best_oa_location":null,"sustainable_development_goals":[],"awards":[{"id":"https://openalex.org/G1049378832","display_name":null,"funder_award_id":"NNF19OC0057418","funder_id":"https://openalex.org/F4320325957","funder_display_name":"Novo Nordisk Fonden"},{"id":"https://openalex.org/G2119097949","display_name":null,"funder_award_id":"MRG6280206","funder_id":"https://openalex.org/F4320322614","funder_display_name":"Thailand Research Fund"},{"id":"https://openalex.org/G6331709845","display_name":null,"funder_award_id":"2-SRA-2016-289-S-B","funder_id":"https://openalex.org/F4320306172","funder_display_name":"Juvenile Diabetes Research Foundation International"}],"funders":[{"id":"https://openalex.org/F4320306172","display_name":"Juvenile Diabetes Research Foundation International","ror":"https://ror.org/00vqxjy61"},{"id":"https://openalex.org/F4320322614","display_name":"Thailand Research Fund","ror":"https://ror.org/03gd1bh37"},{"id":"https://openalex.org/F4320325957","display_name":"Novo Nordisk Fonden","ror":"https://ror.org/04txyc737"}],"has_content":{"pdf":false,"grobid_xml":false},"content_urls":null,"referenced_works_count":114,"referenced_works":["https://openalex.org/W1543068333","https://openalex.org/W1964010911","https://openalex.org/W1968813633","https://openalex.org/W1973743008","https://openalex.org/W1982390234","https://openalex.org/W1985482878","https://openalex.org/W1989299822","https://openalex.org/W1996588166","https://openalex.org/W2015503332","https://openalex.org/W2025944550","https://openalex.org/W2028133290","https://openalex.org/W2034363110","https://openalex.org/W2051366884","https://openalex.org/W2053385401","https://openalex.org/W2065104255","https://openalex.org/W2067094344","https://openalex.org/W2071534982","https://openalex.org/W2074490119","https://openalex.org/W2077109639","https://openalex.org/W2078355959","https://openalex.org/W2083020778","https://openalex.org/W2084375915","https://openalex.org/W2089181989","https://openalex.org/W2097124003","https://openalex.org/W2098824895","https://openalex.org/W2101394823","https://openalex.org/W2104108767","https://openalex.org/W2110256992","https://openalex.org/W2112933939","https://openalex.org/W2125826054","https://openalex.org/W2132218677","https://openalex.org/W2134394193","https://openalex.org/W2144589197","https://openalex.org/W2148044817","https://openalex.org/W2160073075","https://openalex.org/W2163841023","https://openalex.org/W2170564127","https://openalex.org/W2170974939","https://openalex.org/W2173728492","https://openalex.org/W2198606573","https://openalex.org/W2266238598","https://openalex.org/W2311607323","https://openalex.org/W2336169222","https://openalex.org/W2418056440","https://openalex.org/W2468194934","https://openalex.org/W2502949459","https://openalex.org/W2527974276","https://openalex.org/W2560853621","https://openalex.org/W2590077393","https://openalex.org/W2613210283","https://openalex.org/W2641965899","https://openalex.org/W2735014244","https://openalex.org/W2767582147","https://openalex.org/W2767683865","https://openalex.org/W2774669748","https://openalex.org/W2781246871","https://openalex.org/W2783512689","https://openalex.org/W2783788528","https://openalex.org/W2789128799","https://openalex.org/W2792165586","https://openalex.org/W2802842185","https://openalex.org/W2806157403","https://openalex.org/W2820944679","https://openalex.org/W2888484772","https://openalex.org/W2892221324","https://openalex.org/W2896296657","https://openalex.org/W2901218091","https://openalex.org/W2903357856","https://openalex.org/W2905050751","https://openalex.org/W2919115771","https://openalex.org/W2921388451","https://openalex.org/W2935703330","https://openalex.org/W2938756926","https://openalex.org/W2942173509","https://openalex.org/W2943938689","https://openalex.org/W2944664266","https://openalex.org/W2946791964","https://openalex.org/W2947953792","https://openalex.org/W2948600471","https://openalex.org/W2949930735","https://openalex.org/W2950056962","https://openalex.org/W2950668229","https://openalex.org/W2951209146","https://openalex.org/W2951891306","https://openalex.org/W2958239426","https://openalex.org/W2964136462","https://openalex.org/W2969808707","https://openalex.org/W2969887043","https://openalex.org/W2971666515","https://openalex.org/W2974138446","https://openalex.org/W2980773467","https://openalex.org/W2982596783","https://openalex.org/W2989775132","https://openalex.org/W2994716258","https://openalex.org/W2996431818","https://openalex.org/W2997158276","https://openalex.org/W2999288267","https://openalex.org/W3001564603","https://openalex.org/W3003047249","https://openalex.org/W3003470753","https://openalex.org/W3004808664","https://openalex.org/W3006496439","https://openalex.org/W3009967562","https://openalex.org/W3012822544","https://openalex.org/W3013169919","https://openalex.org/W3013554928","https://openalex.org/W3017143772","https://openalex.org/W4210673146","https://openalex.org/W4211085285","https://openalex.org/W4241929126","https://openalex.org/W4294326454","https://openalex.org/W6698064614","https://openalex.org/W6703267800","https://openalex.org/W6775160905"],"related_works":["https://openalex.org/W4390608645","https://openalex.org/W4283390424","https://openalex.org/W4394895745","https://openalex.org/W4247566972","https://openalex.org/W2137270828","https://openalex.org/W2030335929","https://openalex.org/W4396746942","https://openalex.org/W1969082909","https://openalex.org/W3203422688","https://openalex.org/W2431325196"],"abstract_inverted_index":{"Deep":[0],"learning":[1,13],"(DL),":[2],"an":[3],"emerging":[4],"area":[5],"of":[6,11,58,71,88,123,141],"investigation":[7],"in":[8,35,90,93,103,116,121],"the":[9,21,69,86,136],"fields":[10],"machine":[12],"and":[14,33,41,77,106,120,139],"artificial":[15],"intelligence,":[16],"has":[17],"markedly":[18],"advanced":[19],"over":[20],"past":[22],"years.":[23],"DL":[24,48,72,89,113],"techniques":[25],"are":[26],"being":[27],"applied":[28],"to":[29,51,73],"assist":[30,132],"medical":[31],"professionals":[32],"researchers":[34],"improving":[36],"clinical":[37],"diagnosis,":[38],"disease":[39],"prediction":[40,138],"drug":[42],"discovery.":[43,108],"It":[44],"is":[45,114],"expected":[46],"that":[47],"will":[49],"help":[50],"provide":[52],"actionable":[53],"knowledge":[54],"from":[55,81],"a":[56],"variety":[57],"'big":[59],"data',":[60],"including":[61],"metabolomics":[62,94,124,149],"data.":[63,125,150],"In":[64],"this":[65],"review,":[66],"we":[67,110],"discuss":[68,111],"applicability":[70],"metabolomics,":[74],"while":[75],"presenting":[76],"discussing":[78],"several":[79],"examples":[80],"recent":[82],"research.":[83],"We":[84],"emphasize":[85],"use":[87],"tackling":[91],"bottlenecks":[92],"data":[95],"acquisition,":[96],"processing,":[97],"metabolite":[98],"identification,":[99],"as":[100,102],"well":[101],"metabolic":[104,118],"phenotyping":[105],"biomarker":[107],"Finally,":[109],"how":[112],"used":[115],"genome-scale":[117],"modelling":[119],"interpretation":[122],"The":[126],"DL-based":[127],"approaches":[128],"discussed":[129],"here":[130],"may":[131],"computational":[133],"biologists":[134],"with":[135],"integration,":[137],"drawing":[140],"statistical":[142],"inference":[143],"about":[144],"biological":[145],"outcomes,":[146],"based":[147],"on":[148]},"counts_by_year":[{"year":2026,"cited_by_count":7},{"year":2025,"cited_by_count":24},{"year":2024,"cited_by_count":17},{"year":2023,"cited_by_count":23},{"year":2022,"cited_by_count":28},{"year":2021,"cited_by_count":16},{"year":2020,"cited_by_count":3}],"updated_date":"2026-04-07T14:57:38.498316","created_date":"2025-10-10T00:00:00"}
