{"id":"https://openalex.org/W3084295864","doi":"https://doi.org/10.1093/bib/bbaa197","title":"Extended application of genomic selection to screen multiomics data for prognostic signatures of prostate cancer","display_name":"Extended application of genomic selection to screen multiomics data for prognostic signatures of prostate cancer","publication_year":2020,"publication_date":"2020-08-03","ids":{"openalex":"https://openalex.org/W3084295864","doi":"https://doi.org/10.1093/bib/bbaa197","mag":"3084295864","pmid":"https://pubmed.ncbi.nlm.nih.gov/32898860"},"language":"en","primary_location":{"id":"doi:10.1093/bib/bbaa197","is_oa":false,"landing_page_url":"https://doi.org/10.1093/bib/bbaa197","pdf_url":null,"source":{"id":"https://openalex.org/S91767247","display_name":"Briefings in Bioinformatics","issn_l":"1467-5463","issn":["1467-5463","1477-4054"],"is_oa":false,"is_in_doaj":true,"is_core":true,"host_organization":"https://openalex.org/P4310311648","host_organization_name":"Oxford University Press","host_organization_lineage":["https://openalex.org/P4310311648","https://openalex.org/P4310311647"],"host_organization_lineage_names":["Oxford University Press","University of Oxford"],"type":"journal"},"license":null,"license_id":null,"version":"publishedVersion","is_accepted":true,"is_published":true,"raw_source_name":"Briefings in Bioinformatics","raw_type":"journal-article"},"type":"article","indexed_in":["crossref","doaj","pubmed"],"open_access":{"is_oa":false,"oa_status":"closed","oa_url":null,"any_repository_has_fulltext":false},"authorships":[{"author_position":"first","author":{"id":"https://openalex.org/A5100665325","display_name":"Ruidong Li","orcid":"https://orcid.org/0000-0002-4822-2898"},"institutions":[{"id":"https://openalex.org/I103635307","display_name":"University of California, Riverside","ror":"https://ror.org/03nawhv43","country_code":"US","type":"education","lineage":["https://openalex.org/I103635307"]}],"countries":["US"],"is_corresponding":false,"raw_author_name":"Ruidong Li","raw_affiliation_strings":["University of California, Riverside, USA"],"raw_orcid":null,"affiliations":[{"raw_affiliation_string":"University of California, Riverside, USA","institution_ids":["https://openalex.org/I103635307"]}]},{"author_position":"middle","author":{"id":"https://openalex.org/A5100738088","display_name":"Shibo Wang","orcid":"https://orcid.org/0000-0001-5937-4718"},"institutions":[{"id":"https://openalex.org/I103635307","display_name":"University of California, Riverside","ror":"https://ror.org/03nawhv43","country_code":"US","type":"education","lineage":["https://openalex.org/I103635307"]}],"countries":["US"],"is_corresponding":false,"raw_author_name":"Shibo Wang","raw_affiliation_strings":["University of California, Riverside, USA"],"raw_orcid":"https://orcid.org/0000-0001-5937-4718","affiliations":[{"raw_affiliation_string":"University of California, Riverside, USA","institution_ids":["https://openalex.org/I103635307"]}]},{"author_position":"middle","author":{"id":"https://openalex.org/A5061909702","display_name":"Yanru Cui","orcid":"https://orcid.org/0000-0001-8592-5237"},"institutions":[{"id":"https://openalex.org/I108160477","display_name":"Hebei Agricultural University","ror":"https://ror.org/009fw8j44","country_code":"CN","type":"education","lineage":["https://openalex.org/I108160477"]}],"countries":["CN"],"is_corresponding":false,"raw_author_name":"Yanru Cui","raw_affiliation_strings":["Hebei Agricultural University, China"],"raw_orcid":null,"affiliations":[{"raw_affiliation_string":"Hebei Agricultural University, China","institution_ids":["https://openalex.org/I108160477"]}]},{"author_position":"middle","author":{"id":"https://openalex.org/A5103250286","display_name":"Han Qu","orcid":"https://orcid.org/0000-0002-6016-5152"},"institutions":[{"id":"https://openalex.org/I103635307","display_name":"University of California, Riverside","ror":"https://ror.org/03nawhv43","country_code":"US","type":"education","lineage":["https://openalex.org/I103635307"]}],"countries":["US"],"is_corresponding":false,"raw_author_name":"Han Qu","raw_affiliation_strings":["University of California, Riverside, USA"],"raw_orcid":null,"affiliations":[{"raw_affiliation_string":"University of California, Riverside, USA","institution_ids":["https://openalex.org/I103635307"]}]},{"author_position":"middle","author":{"id":"https://openalex.org/A5011634811","display_name":"John M. Chater","orcid":"https://orcid.org/0000-0003-2145-2498"},"institutions":[{"id":"https://openalex.org/I103635307","display_name":"University of California, Riverside","ror":"https://ror.org/03nawhv43","country_code":"US","type":"education","lineage":["https://openalex.org/I103635307"]}],"countries":["US"],"is_corresponding":false,"raw_author_name":"John M Chater","raw_affiliation_strings":["University of California, Riverside, USA"],"raw_orcid":null,"affiliations":[{"raw_affiliation_string":"University of California, Riverside, USA","institution_ids":["https://openalex.org/I103635307"]}]},{"author_position":"middle","author":{"id":"https://openalex.org/A5100350657","display_name":"Le Zhang","orcid":"https://orcid.org/0009-0008-0205-2150"},"institutions":[{"id":"https://openalex.org/I103635307","display_name":"University of California, Riverside","ror":"https://ror.org/03nawhv43","country_code":"US","type":"education","lineage":["https://openalex.org/I103635307"]}],"countries":["US"],"is_corresponding":false,"raw_author_name":"Le Zhang","raw_affiliation_strings":["University of California, Riverside, USA"],"raw_orcid":null,"affiliations":[{"raw_affiliation_string":"University of California, Riverside, USA","institution_ids":["https://openalex.org/I103635307"]}]},{"author_position":"middle","author":{"id":"https://openalex.org/A5113964469","display_name":"Julong Wei","orcid":null},"institutions":[{"id":"https://openalex.org/I185443292","display_name":"Wayne State University","ror":"https://ror.org/01070mq45","country_code":"US","type":"education","lineage":["https://openalex.org/I185443292"]}],"countries":["US"],"is_corresponding":false,"raw_author_name":"Julong Wei","raw_affiliation_strings":["Wayne State University"],"raw_orcid":null,"affiliations":[{"raw_affiliation_string":"Wayne State University","institution_ids":["https://openalex.org/I185443292"]}]},{"author_position":"middle","author":{"id":"https://openalex.org/A5019689839","display_name":"Meiyue Wang","orcid":"https://orcid.org/0000-0003-4999-4432"},"institutions":[{"id":"https://openalex.org/I103635307","display_name":"University of California, Riverside","ror":"https://ror.org/03nawhv43","country_code":"US","type":"education","lineage":["https://openalex.org/I103635307"]}],"countries":["US"],"is_corresponding":false,"raw_author_name":"Meiyue Wang","raw_affiliation_strings":["University of California, Riverside, USA"],"raw_orcid":null,"affiliations":[{"raw_affiliation_string":"University of California, Riverside, USA","institution_ids":["https://openalex.org/I103635307"]}]},{"author_position":"middle","author":{"id":"https://openalex.org/A5100661857","display_name":"Yang Xu","orcid":"https://orcid.org/0000-0002-6493-4916"},"institutions":[{"id":"https://openalex.org/I78978612","display_name":"Yangzhou University","ror":"https://ror.org/03tqb8s11","country_code":"CN","type":"education","lineage":["https://openalex.org/I78978612"]}],"countries":["CN"],"is_corresponding":false,"raw_author_name":"Yang Xu","raw_affiliation_strings":["Yangzhou University, China"],"raw_orcid":null,"affiliations":[{"raw_affiliation_string":"Yangzhou University, China","institution_ids":["https://openalex.org/I78978612"]}]},{"author_position":"middle","author":{"id":"https://openalex.org/A5100768326","display_name":"Lei Yu","orcid":"https://orcid.org/0000-0002-3504-4893"},"institutions":[{"id":"https://openalex.org/I103635307","display_name":"University of California, Riverside","ror":"https://ror.org/03nawhv43","country_code":"US","type":"education","lineage":["https://openalex.org/I103635307"]}],"countries":["US"],"is_corresponding":false,"raw_author_name":"Lei Yu","raw_affiliation_strings":["University of California, Riverside, USA"],"raw_orcid":null,"affiliations":[{"raw_affiliation_string":"University of California, Riverside, USA","institution_ids":["https://openalex.org/I103635307"]}]},{"author_position":"middle","author":{"id":"https://openalex.org/A5038405167","display_name":"Jianming L\u00fc","orcid":"https://orcid.org/0000-0002-3794-641X"},"institutions":[{"id":"https://openalex.org/I90610280","display_name":"South China University of Technology","ror":"https://ror.org/0530pts50","country_code":"CN","type":"education","lineage":["https://openalex.org/I90610280"]}],"countries":["CN"],"is_corresponding":false,"raw_author_name":"Jianming Lu","raw_affiliation_strings":["South China University of Technology, China"],"raw_orcid":null,"affiliations":[{"raw_affiliation_string":"South China University of Technology, China","institution_ids":["https://openalex.org/I90610280"]}]},{"author_position":"middle","author":{"id":"https://openalex.org/A5102427155","display_name":"Yuanfa Feng","orcid":null},"institutions":[{"id":"https://openalex.org/I90610280","display_name":"South China University of Technology","ror":"https://ror.org/0530pts50","country_code":"CN","type":"education","lineage":["https://openalex.org/I90610280"]}],"countries":["CN"],"is_corresponding":false,"raw_author_name":"Yuanfa Feng","raw_affiliation_strings":["South China University of Technology, China"],"raw_orcid":null,"affiliations":[{"raw_affiliation_string":"South China University of Technology, China","institution_ids":["https://openalex.org/I90610280"]}]},{"author_position":"middle","author":{"id":"https://openalex.org/A5100424804","display_name":"Rui Zhou","orcid":"https://orcid.org/0000-0001-7794-2512"},"institutions":[{"id":"https://openalex.org/I90610280","display_name":"South China University of Technology","ror":"https://ror.org/0530pts50","country_code":"CN","type":"education","lineage":["https://openalex.org/I90610280"]}],"countries":["CN"],"is_corresponding":false,"raw_author_name":"Rui Zhou","raw_affiliation_strings":["South China University of Technology, China"],"raw_orcid":null,"affiliations":[{"raw_affiliation_string":"South China University of Technology, China","institution_ids":["https://openalex.org/I90610280"]}]},{"author_position":"middle","author":{"id":"https://openalex.org/A5101404171","display_name":"Yuhan Huang","orcid":"https://orcid.org/0009-0000-0995-3455"},"institutions":[{"id":"https://openalex.org/I161318765","display_name":"University of California, Los Angeles","ror":"https://ror.org/046rm7j60","country_code":"US","type":"education","lineage":["https://openalex.org/I161318765"]}],"countries":["US"],"is_corresponding":false,"raw_author_name":"Yuhan Huang","raw_affiliation_strings":["University of California, Los Angeles, USA"],"raw_orcid":null,"affiliations":[{"raw_affiliation_string":"University of California, Los Angeles, USA","institution_ids":["https://openalex.org/I161318765"]}]},{"author_position":"middle","author":{"id":"https://openalex.org/A5044908762","display_name":"Renyuan Ma","orcid":null},"institutions":[{"id":"https://openalex.org/I135474949","display_name":"Bowdoin College","ror":"https://ror.org/03gh96r95","country_code":"US","type":"education","lineage":["https://openalex.org/I135474949"]}],"countries":["US"],"is_corresponding":false,"raw_author_name":"Renyuan Ma","raw_affiliation_strings":["Bowdoin College, USA"],"raw_orcid":null,"affiliations":[{"raw_affiliation_string":"Bowdoin College, USA","institution_ids":["https://openalex.org/I135474949"]}]},{"author_position":"middle","author":{"id":"https://openalex.org/A5102003831","display_name":"Jianguo Zhu","orcid":"https://orcid.org/0000-0002-1171-0126"},"institutions":[{"id":"https://openalex.org/I4210154454","display_name":"Guizhou Provincial People's Hospital","ror":"https://ror.org/046q1bp69","country_code":"CN","type":"healthcare","lineage":["https://openalex.org/I4210154454"]}],"countries":["CN"],"is_corresponding":true,"raw_author_name":"Jianguo Zhu","raw_affiliation_strings":["Guizhou Provincial People\u2019s Hospital, Guizhou, China","Guizhou Provincial People's Hospital, Guizhou, China"],"raw_orcid":null,"affiliations":[{"raw_affiliation_string":"Guizhou Provincial People\u2019s Hospital, Guizhou, China","institution_ids":["https://openalex.org/I4210154454"]},{"raw_affiliation_string":"Guizhou Provincial People's Hospital, Guizhou, China","institution_ids":["https://openalex.org/I4210154454"]}]},{"author_position":"middle","author":{"id":"https://openalex.org/A5012938558","display_name":"Weide Zhong","orcid":"https://orcid.org/0000-0002-0430-2845"},"institutions":[{"id":"https://openalex.org/I90610280","display_name":"South China University of Technology","ror":"https://ror.org/0530pts50","country_code":"CN","type":"education","lineage":["https://openalex.org/I90610280"]}],"countries":["CN"],"is_corresponding":true,"raw_author_name":"Weide Zhong","raw_affiliation_strings":["South China University of Technology, Guangzhou, China"],"raw_orcid":null,"affiliations":[{"raw_affiliation_string":"South China University of Technology, Guangzhou, China","institution_ids":["https://openalex.org/I90610280"]}]},{"author_position":"last","author":{"id":"https://openalex.org/A5055540990","display_name":"Zhenyu Jia","orcid":"https://orcid.org/0000-0002-1428-904X"},"institutions":[{"id":"https://openalex.org/I103635307","display_name":"University of California, Riverside","ror":"https://ror.org/03nawhv43","country_code":"US","type":"education","lineage":["https://openalex.org/I103635307"]}],"countries":["US"],"is_corresponding":true,"raw_author_name":"Zhenyu Jia","raw_affiliation_strings":["University of California, Riverside, USA"],"raw_orcid":null,"affiliations":[{"raw_affiliation_string":"University of California, Riverside, USA","institution_ids":["https://openalex.org/I103635307"]}]}],"institutions":[],"countries_distinct_count":2,"institutions_distinct_count":8,"corresponding_author_ids":["https://openalex.org/A5012938558","https://openalex.org/A5055540990","https://openalex.org/A5102003831"],"corresponding_institution_ids":["https://openalex.org/I103635307","https://openalex.org/I4210154454","https://openalex.org/I90610280"],"apc_list":{"value":4011,"currency":"USD","value_usd":4011},"apc_paid":null,"fwci":2.3975,"has_fulltext":false,"cited_by_count":18,"citation_normalized_percentile":{"value":0.89097444,"is_in_top_1_percent":false,"is_in_top_10_percent":false},"cited_by_percentile_year":{"min":89,"max":98},"biblio":{"volume":"22","issue":"3","first_page":null,"last_page":null},"is_retracted":false,"is_paratext":false,"is_xpac":false,"primary_topic":{"id":"https://openalex.org/T10594","display_name":"Genetic and phenotypic traits in livestock","score":0.9944999814033508,"subfield":{"id":"https://openalex.org/subfields/1311","display_name":"Genetics"},"field":{"id":"https://openalex.org/fields/13","display_name":"Biochemistry, Genetics and Molecular Biology"},"domain":{"id":"https://openalex.org/domains/1","display_name":"Life Sciences"}},"topics":[{"id":"https://openalex.org/T10594","display_name":"Genetic and phenotypic traits in livestock","score":0.9944999814033508,"subfield":{"id":"https://openalex.org/subfields/1311","display_name":"Genetics"},"field":{"id":"https://openalex.org/fields/13","display_name":"Biochemistry, Genetics and Molecular Biology"},"domain":{"id":"https://openalex.org/domains/1","display_name":"Life Sciences"}},{"id":"https://openalex.org/T10543","display_name":"Prostate Cancer Treatment and Research","score":0.989799976348877,"subfield":{"id":"https://openalex.org/subfields/2740","display_name":"Pulmonary and Respiratory Medicine"},"field":{"id":"https://openalex.org/fields/27","display_name":"Medicine"},"domain":{"id":"https://openalex.org/domains/4","display_name":"Health Sciences"}},{"id":"https://openalex.org/T12465","display_name":"Cancer, Lipids, and Metabolism","score":0.9869999885559082,"subfield":{"id":"https://openalex.org/subfields/1306","display_name":"Cancer Research"},"field":{"id":"https://openalex.org/fields/13","display_name":"Biochemistry, Genetics and Molecular Biology"},"domain":{"id":"https://openalex.org/domains/1","display_name":"Life Sciences"}}],"keywords":[{"id":"https://openalex.org/keywords/predictability","display_name":"Predictability","score":0.5546895265579224},{"id":"https://openalex.org/keywords/best-linear-unbiased-prediction","display_name":"Best linear unbiased prediction","score":0.5527818202972412},{"id":"https://openalex.org/keywords/computational-biology","display_name":"Computational biology","score":0.4828941822052002},{"id":"https://openalex.org/keywords/selection","display_name":"Selection (genetic algorithm)","score":0.44020769000053406},{"id":"https://openalex.org/keywords/prostate-cancer","display_name":"Prostate cancer","score":0.4330313205718994},{"id":"https://openalex.org/keywords/computer-science","display_name":"Computer science","score":0.4189390540122986},{"id":"https://openalex.org/keywords/feature-selection","display_name":"Feature selection","score":0.41762053966522217},{"id":"https://openalex.org/keywords/biology","display_name":"Biology","score":0.3507094979286194},{"id":"https://openalex.org/keywords/bioinformatics","display_name":"Bioinformatics","score":0.34282761812210083},{"id":"https://openalex.org/keywords/cancer","display_name":"Cancer","score":0.2285931408405304},{"id":"https://openalex.org/keywords/machine-learning","display_name":"Machine learning","score":0.22158318758010864},{"id":"https://openalex.org/keywords/statistics","display_name":"Statistics","score":0.17483675479888916},{"id":"https://openalex.org/keywords/genetics","display_name":"Genetics","score":0.1187891960144043},{"id":"https://openalex.org/keywords/mathematics","display_name":"Mathematics","score":0.1117144525051117}],"concepts":[{"id":"https://openalex.org/C197640229","wikidata":"https://www.wikidata.org/wiki/Q2534066","display_name":"Predictability","level":2,"score":0.5546895265579224},{"id":"https://openalex.org/C103545067","wikidata":"https://www.wikidata.org/wiki/Q796265","display_name":"Best linear unbiased prediction","level":3,"score":0.5527818202972412},{"id":"https://openalex.org/C70721500","wikidata":"https://www.wikidata.org/wiki/Q177005","display_name":"Computational biology","level":1,"score":0.4828941822052002},{"id":"https://openalex.org/C81917197","wikidata":"https://www.wikidata.org/wiki/Q628760","display_name":"Selection (genetic algorithm)","level":2,"score":0.44020769000053406},{"id":"https://openalex.org/C2780192828","wikidata":"https://www.wikidata.org/wiki/Q181257","display_name":"Prostate cancer","level":3,"score":0.4330313205718994},{"id":"https://openalex.org/C41008148","wikidata":"https://www.wikidata.org/wiki/Q21198","display_name":"Computer science","level":0,"score":0.4189390540122986},{"id":"https://openalex.org/C148483581","wikidata":"https://www.wikidata.org/wiki/Q446488","display_name":"Feature selection","level":2,"score":0.41762053966522217},{"id":"https://openalex.org/C86803240","wikidata":"https://www.wikidata.org/wiki/Q420","display_name":"Biology","level":0,"score":0.3507094979286194},{"id":"https://openalex.org/C60644358","wikidata":"https://www.wikidata.org/wiki/Q128570","display_name":"Bioinformatics","level":1,"score":0.34282761812210083},{"id":"https://openalex.org/C121608353","wikidata":"https://www.wikidata.org/wiki/Q12078","display_name":"Cancer","level":2,"score":0.2285931408405304},{"id":"https://openalex.org/C119857082","wikidata":"https://www.wikidata.org/wiki/Q2539","display_name":"Machine learning","level":1,"score":0.22158318758010864},{"id":"https://openalex.org/C105795698","wikidata":"https://www.wikidata.org/wiki/Q12483","display_name":"Statistics","level":1,"score":0.17483675479888916},{"id":"https://openalex.org/C54355233","wikidata":"https://www.wikidata.org/wiki/Q7162","display_name":"Genetics","level":1,"score":0.1187891960144043},{"id":"https://openalex.org/C33923547","wikidata":"https://www.wikidata.org/wiki/Q395","display_name":"Mathematics","level":0,"score":0.1117144525051117}],"mesh":[{"descriptor_ui":"D000368","descriptor_name":"Aged","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D000368","descriptor_name":"Aged","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D000368","descriptor_name":"Aged","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D000465","descriptor_name":"Algorithms","qualifier_ui":null,"qualifier_name":null,"is_major_topic":true},{"descriptor_ui":"D000465","descriptor_name":"Algorithms","qualifier_ui":null,"qualifier_name":null,"is_major_topic":true},{"descriptor_ui":"D000465","descriptor_name":"Algorithms","qualifier_ui":null,"qualifier_name":null,"is_major_topic":true},{"descriptor_ui":"D006801","descriptor_name":"Humans","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D006801","descriptor_name":"Humans","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D006801","descriptor_name":"Humans","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D008297","descriptor_name":"Male","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D008297","descriptor_name":"Male","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D008297","descriptor_name":"Male","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D008875","descriptor_name":"Middle Aged","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D008875","descriptor_name":"Middle Aged","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D008875","descriptor_name":"Middle Aged","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D008957","descriptor_name":"Models, Genetic","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D008957","descriptor_name":"Models, Genetic","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D008957","descriptor_name":"Models, Genetic","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D009367","descriptor_name":"Neoplasm Staging","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D009367","descriptor_name":"Neoplasm Staging","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D009367","descriptor_name":"Neoplasm Staging","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D010641","descriptor_name":"Phenotype","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D010641","descriptor_name":"Phenotype","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D010641","descriptor_name":"Phenotype","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D011379","descriptor_name":"Prognosis","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D011379","descriptor_name":"Prognosis","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D011379","descriptor_name":"Prognosis","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D011468","descriptor_name":"Prostatectomy","qualifier_ui":"Q000379","qualifier_name":"methods","is_major_topic":false},{"descriptor_ui":"D011468","descriptor_name":"Prostatectomy","qualifier_ui":"Q000379","qualifier_name":"methods","is_major_topic":false},{"descriptor_ui":"D011468","descriptor_name":"Prostatectomy","qualifier_ui":"Q000379","qualifier_name":"methods","is_major_topic":false},{"descriptor_ui":"D011471","descriptor_name":"Prostatic Neoplasms","qualifier_ui":"Q000235","qualifier_name":"genetics","is_major_topic":false},{"descriptor_ui":"D011471","descriptor_name":"Prostatic Neoplasms","qualifier_ui":"Q000235","qualifier_name":"genetics","is_major_topic":false},{"descriptor_ui":"D011471","descriptor_name":"Prostatic Neoplasms","qualifier_ui":"Q000235","qualifier_name":"genetics","is_major_topic":false},{"descriptor_ui":"D011471","descriptor_name":"Prostatic Neoplasms","qualifier_ui":"Q000473","qualifier_name":"pathology","is_major_topic":false},{"descriptor_ui":"D011471","descriptor_name":"Prostatic Neoplasms","qualifier_ui":"Q000473","qualifier_name":"pathology","is_major_topic":false},{"descriptor_ui":"D011471","descriptor_name":"Prostatic Neoplasms","qualifier_ui":"Q000473","qualifier_name":"pathology","is_major_topic":false},{"descriptor_ui":"D011471","descriptor_name":"Prostatic Neoplasms","qualifier_ui":"Q000601","qualifier_name":"surgery","is_major_topic":false},{"descriptor_ui":"D011471","descriptor_name":"Prostatic Neoplasms","qualifier_ui":"Q000601","qualifier_name":"surgery","is_major_topic":false},{"descriptor_ui":"D011471","descriptor_name":"Prostatic Neoplasms","qualifier_ui":"Q000601","qualifier_name":"surgery","is_major_topic":false},{"descriptor_ui":"D014408","descriptor_name":"Biomarkers, Tumor","qualifier_ui":"Q000235","qualifier_name":"genetics","is_major_topic":false},{"descriptor_ui":"D014408","descriptor_name":"Biomarkers, Tumor","qualifier_ui":"Q000235","qualifier_name":"genetics","is_major_topic":false},{"descriptor_ui":"D014408","descriptor_name":"Biomarkers, Tumor","qualifier_ui":"Q000235","qualifier_name":"genetics","is_major_topic":false},{"descriptor_ui":"D015972","descriptor_name":"Gene Expression Regulation, Neoplastic","qualifier_ui":null,"qualifier_name":null,"is_major_topic":true},{"descriptor_ui":"D015972","descriptor_name":"Gene Expression Regulation, Neoplastic","qualifier_ui":null,"qualifier_name":null,"is_major_topic":true},{"descriptor_ui":"D015972","descriptor_name":"Gene Expression Regulation, Neoplastic","qualifier_ui":null,"qualifier_name":null,"is_major_topic":true},{"descriptor_ui":"D020869","descriptor_name":"Gene Expression Profiling","qualifier_ui":"Q000379","qualifier_name":"methods","is_major_topic":false},{"descriptor_ui":"D020869","descriptor_name":"Gene Expression Profiling","qualifier_ui":"Q000379","qualifier_name":"methods","is_major_topic":false},{"descriptor_ui":"D020869","descriptor_name":"Gene Expression Profiling","qualifier_ui":"Q000379","qualifier_name":"methods","is_major_topic":false},{"descriptor_ui":"D023281","descriptor_name":"Genomics","qualifier_ui":"Q000379","qualifier_name":"methods","is_major_topic":false},{"descriptor_ui":"D023281","descriptor_name":"Genomics","qualifier_ui":"Q000379","qualifier_name":"methods","is_major_topic":false},{"descriptor_ui":"D023281","descriptor_name":"Genomics","qualifier_ui":"Q000379","qualifier_name":"methods","is_major_topic":false},{"descriptor_ui":"D035683","descriptor_name":"MicroRNAs","qualifier_ui":"Q000235","qualifier_name":"genetics","is_major_topic":false},{"descriptor_ui":"D035683","descriptor_name":"MicroRNAs","qualifier_ui":"Q000235","qualifier_name":"genetics","is_major_topic":false},{"descriptor_ui":"D035683","descriptor_name":"MicroRNAs","qualifier_ui":"Q000235","qualifier_name":"genetics","is_major_topic":false},{"descriptor_ui":"D053208","descriptor_name":"Kaplan-Meier Estimate","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D053208","descriptor_name":"Kaplan-Meier Estimate","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D053208","descriptor_name":"Kaplan-Meier Estimate","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false}],"locations_count":2,"locations":[{"id":"doi:10.1093/bib/bbaa197","is_oa":false,"landing_page_url":"https://doi.org/10.1093/bib/bbaa197","pdf_url":null,"source":{"id":"https://openalex.org/S91767247","display_name":"Briefings in Bioinformatics","issn_l":"1467-5463","issn":["1467-5463","1477-4054"],"is_oa":false,"is_in_doaj":true,"is_core":true,"host_organization":"https://openalex.org/P4310311648","host_organization_name":"Oxford University Press","host_organization_lineage":["https://openalex.org/P4310311648","https://openalex.org/P4310311647"],"host_organization_lineage_names":["Oxford University Press","University of Oxford"],"type":"journal"},"license":null,"license_id":null,"version":"publishedVersion","is_accepted":true,"is_published":true,"raw_source_name":"Briefings in Bioinformatics","raw_type":"journal-article"},{"id":"pmid:32898860","is_oa":false,"landing_page_url":"https://pubmed.ncbi.nlm.nih.gov/32898860","pdf_url":null,"source":{"id":"https://openalex.org/S4306525036","display_name":"PubMed","issn_l":null,"issn":null,"is_oa":false,"is_in_doaj":false,"is_core":false,"host_organization":"https://openalex.org/I1299303238","host_organization_name":"National Institutes of Health","host_organization_lineage":["https://openalex.org/I1299303238"],"host_organization_lineage_names":[],"type":"repository"},"license":null,"license_id":null,"version":"publishedVersion","is_accepted":true,"is_published":true,"raw_source_name":"Briefings in bioinformatics","raw_type":null}],"best_oa_location":null,"sustainable_development_goals":[],"awards":[{"id":"https://openalex.org/G271522104","display_name":"\u524d\u5217\u817a\u764cNF-\u03baB\u708e\u75c7\u901a\u8def\u4e0eZFP36\u8d1f\u8c03\u63a7\u7cd6\u4ee3\u8c22\u7814\u7a76","funder_award_id":"81660426","funder_id":"https://openalex.org/F4320321001","funder_display_name":"National Natural Science Foundation of China"},{"id":"https://openalex.org/G3231820164","display_name":null,"funder_award_id":"81873608","funder_id":"https://openalex.org/F4320321001","funder_display_name":"National Natural Science Foundation of China"},{"id":"https://openalex.org/G3348098127","display_name":null,"funder_award_id":"201803040001","funder_id":"https://openalex.org/F4320335480","funder_display_name":"Guangzhou Municipal Science and Technology Project"},{"id":"https://openalex.org/G3812784441","display_name":null,"funder_award_id":"201707010291","funder_id":"https://openalex.org/F4320335480","funder_display_name":"Guangzhou Municipal Science and Technology Project"},{"id":"https://openalex.org/G6617385019","display_name":null,"funder_award_id":"81571427","funder_id":"https://openalex.org/F4320321001","funder_display_name":"National Natural Science Foundation of China"}],"funders":[{"id":"https://openalex.org/F4320321001","display_name":"National Natural Science Foundation of China","ror":"https://ror.org/01h0zpd94"},{"id":"https://openalex.org/F4320335480","display_name":"Guangzhou Municipal Science and Technology Project","ror":null}],"has_content":{"grobid_xml":false,"pdf":false},"content_urls":null,"referenced_works_count":45,"referenced_works":["https://openalex.org/W1684904284","https://openalex.org/W1876352197","https://openalex.org/W1928998639","https://openalex.org/W1936555975","https://openalex.org/W1968766175","https://openalex.org/W1970149620","https://openalex.org/W1992140675","https://openalex.org/W1998343146","https://openalex.org/W2000056288","https://openalex.org/W2048635991","https://openalex.org/W2065808340","https://openalex.org/W2067715889","https://openalex.org/W2073503722","https://openalex.org/W2097360283","https://openalex.org/W2100239923","https://openalex.org/W2100253170","https://openalex.org/W2107633226","https://openalex.org/W2114104545","https://openalex.org/W2117654632","https://openalex.org/W2135046866","https://openalex.org/W2138207763","https://openalex.org/W2148603752","https://openalex.org/W2148708580","https://openalex.org/W2149441684","https://openalex.org/W2151494814","https://openalex.org/W2151834630","https://openalex.org/W2152561234","https://openalex.org/W2155496693","https://openalex.org/W2157963336","https://openalex.org/W2169456326","https://openalex.org/W2571361994","https://openalex.org/W2572025794","https://openalex.org/W2603368955","https://openalex.org/W2761180418","https://openalex.org/W2765094284","https://openalex.org/W2774669748","https://openalex.org/W2784313238","https://openalex.org/W2802145818","https://openalex.org/W2889646458","https://openalex.org/W2904355372","https://openalex.org/W2922343610","https://openalex.org/W4254721730","https://openalex.org/W4293258550","https://openalex.org/W4294541781","https://openalex.org/W6629838039"],"related_works":["https://openalex.org/W2726467123","https://openalex.org/W2064726690","https://openalex.org/W4252678288","https://openalex.org/W4254065731","https://openalex.org/W1607297154","https://openalex.org/W4210820789","https://openalex.org/W4237782192","https://openalex.org/W2913177154","https://openalex.org/W4235131201","https://openalex.org/W4232793539"],"abstract_inverted_index":{"Prognostic":[0],"tests":[1,19],"using":[2,113],"expression":[3,114,183],"profiles":[4],"of":[5,73,108,116,120,127,142,146,189,203,227,245],"several":[6],"dozen":[7],"genes":[8,122],"help":[9],"provide":[10],"treatment":[11],"choices":[12],"for":[13,27,57,163,185,217],"prostate":[14],"cancer":[15],"(PCa).":[16],"However,":[17],"these":[18],"require":[20],"improvement":[21],"to":[22,32,48,68,158,174,178,213],"meet":[23],"the":[24,70,85,93,102,175,204,223,228],"clinical":[25],"need":[26],"resolving":[28],"overtreatment,":[29],"which":[30,44,82,191],"continues":[31],"be":[33],"a":[34,117,143,151,200,238],"pervasive":[35],"problem":[36],"in":[37,54,194,231,235,241],"PCa":[38,58,218],"management.":[39],"Genomic":[40],"selection":[41,155],"(GS)":[42],"methodology,":[43],"utilizes":[45],"whole-genome":[46],"markers":[47],"predict":[49],"agronomic":[50],"traits,":[51],"was":[52,172],"adopted":[53],"this":[55],"study":[56],"prognosis.":[59,219],"We":[60],"leveraged":[61],"The":[62,169,220],"Cancer":[63],"Genome":[64],"Atlas":[65],"(TCGA)":[66],"database":[67],"evaluate":[69],"prediction":[71],"performance":[72],"six":[74,195],"GS":[75],"methods":[76,95],"and":[77,98,123,181,209,225],"seven":[78],"omics":[79,129],"data":[80,115,130,162,177,216],"combinations,":[81],"showed":[83],"that":[84,112],"Best":[86],"Linear":[87],"Unbiased":[88],"Prediction":[89],"(BLUP)":[90],"model":[91],"outperformed":[92],"other":[94,128,243],"regarding":[96],"predictability":[97,136],"computational":[99],"efficiency.":[100],"Leveraging":[101],"BLUP-HAT":[103,156,207],"method,":[104],"an":[105,125],"accelerated":[106],"version":[107],"BLUP,":[109],"we":[110,149],"demonstrated":[111,222],"large":[118],"number":[119,145],"disease-relevant":[121],"with":[124,139,166],"integration":[126],"(i.e.":[131],"miRNAs)":[132],"significantly":[133],"increased":[134],"outcome":[135],"when":[137],"compared":[138],"panels":[140],"consisting":[141],"small":[144],"genes.":[147],"Finally,":[148],"developed":[150],"novel":[152],"stepwise":[153],"forward":[154],"method":[157,171,208],"facilitate":[159],"searching":[160],"multiomics":[161,215],"predictor":[164],"variables":[165],"prognostic":[167,233],"potential.":[168],"new":[170,229],"applied":[173],"TCGA":[176],"derive":[179],"mRNA":[180],"miRNA":[182],"signatures":[184],"predicting":[186],"relapse-free":[187],"survival":[188],"PCa,":[190,236],"were":[192],"validated":[193],"independent":[196],"cohorts.":[197],"This":[198],"is":[199],"transdisciplinary":[201],"adoption":[202],"highly":[205],"efficient":[206],"its":[210],"derived":[211],"algorithms":[212],"analyze":[214],"results":[221],"efficacy":[224],"robustness":[226],"methodology":[230],"developing":[232],"models":[234],"suggesting":[237],"potential":[239],"utility":[240],"managing":[242],"types":[244],"cancer.":[246]},"counts_by_year":[{"year":2026,"cited_by_count":1},{"year":2025,"cited_by_count":1},{"year":2024,"cited_by_count":2},{"year":2023,"cited_by_count":4},{"year":2022,"cited_by_count":4},{"year":2021,"cited_by_count":5},{"year":2020,"cited_by_count":1}],"updated_date":"2026-05-21T06:26:12.895304","created_date":"2025-10-10T00:00:00"}
