{"id":"https://openalex.org/W3048282138","doi":"https://doi.org/10.1093/bib/bbaa178","title":"LncR2metasta: a manually curated database for experimentally supported lncRNAs during various cancer metastatic events","display_name":"LncR2metasta: a manually curated database for experimentally supported lncRNAs during various cancer metastatic events","publication_year":2020,"publication_date":"2020-07-14","ids":{"openalex":"https://openalex.org/W3048282138","doi":"https://doi.org/10.1093/bib/bbaa178","mag":"3048282138","pmid":"https://pubmed.ncbi.nlm.nih.gov/32766766"},"language":"en","primary_location":{"id":"doi:10.1093/bib/bbaa178","is_oa":false,"landing_page_url":"https://doi.org/10.1093/bib/bbaa178","pdf_url":null,"source":{"id":"https://openalex.org/S91767247","display_name":"Briefings in Bioinformatics","issn_l":"1467-5463","issn":["1467-5463","1477-4054"],"is_oa":false,"is_in_doaj":true,"is_core":true,"host_organization":"https://openalex.org/P4310311648","host_organization_name":"Oxford University Press","host_organization_lineage":["https://openalex.org/P4310311648","https://openalex.org/P4310311647"],"host_organization_lineage_names":["Oxford University Press","University of Oxford"],"type":"journal"},"license":null,"license_id":null,"version":"publishedVersion","is_accepted":true,"is_published":true,"raw_source_name":"Briefings in Bioinformatics","raw_type":"journal-article"},"type":"article","indexed_in":["crossref","doaj","pubmed"],"open_access":{"is_oa":false,"oa_status":"closed","oa_url":null,"any_repository_has_fulltext":false},"authorships":[{"author_position":"first","author":{"id":"https://openalex.org/A5101923268","display_name":"Shihua Zhang","orcid":"https://orcid.org/0000-0002-3877-9166"},"institutions":[{"id":"https://openalex.org/I43922553","display_name":"Wuhan University of Science and Technology","ror":"https://ror.org/00e4hrk88","country_code":"CN","type":"education","lineage":["https://openalex.org/I43922553"]}],"countries":["CN"],"is_corresponding":false,"raw_author_name":"Shihua Zhang","raw_affiliation_strings":["College of Life Science and Health, Wuhan University of Science and Technology, Wuhan, China"],"raw_orcid":null,"affiliations":[{"raw_affiliation_string":"College of Life Science and Health, Wuhan University of Science and Technology, Wuhan, China","institution_ids":["https://openalex.org/I43922553"]}]},{"author_position":"middle","author":{"id":"https://openalex.org/A5100714225","display_name":"Xiaolong He","orcid":"https://orcid.org/0000-0002-1509-8739"},"institutions":[{"id":"https://openalex.org/I140221134","display_name":"Anhui Agricultural University","ror":"https://ror.org/0327f3359","country_code":"CN","type":"education","lineage":["https://openalex.org/I140221134"]}],"countries":["CN"],"is_corresponding":false,"raw_author_name":"Xiaolong He","raw_affiliation_strings":["School of Science, Anhui Agricultural University, Hefei, China"],"raw_orcid":null,"affiliations":[{"raw_affiliation_string":"School of Science, Anhui Agricultural University, Hefei, China","institution_ids":["https://openalex.org/I140221134"]}]},{"author_position":"middle","author":{"id":"https://openalex.org/A5100421935","display_name":"Rui Zhang","orcid":"https://orcid.org/0000-0001-5854-2468"},"institutions":[{"id":"https://openalex.org/I140221134","display_name":"Anhui Agricultural University","ror":"https://ror.org/0327f3359","country_code":"CN","type":"education","lineage":["https://openalex.org/I140221134"]}],"countries":["CN"],"is_corresponding":false,"raw_author_name":"Rui Zhang","raw_affiliation_strings":["College of Information and Computer Science, Anhui Agricultural University, Hefei, China"],"raw_orcid":null,"affiliations":[{"raw_affiliation_string":"College of Information and Computer Science, Anhui Agricultural University, Hefei, China","institution_ids":["https://openalex.org/I140221134"]}]},{"author_position":"last","author":{"id":"https://openalex.org/A5012763020","display_name":"Wensheng Deng","orcid":"https://orcid.org/0000-0003-2454-2288"},"institutions":[{"id":"https://openalex.org/I43922553","display_name":"Wuhan University of Science and Technology","ror":"https://ror.org/00e4hrk88","country_code":"CN","type":"education","lineage":["https://openalex.org/I43922553"]}],"countries":["CN"],"is_corresponding":true,"raw_author_name":"Wensheng Deng","raw_affiliation_strings":["College of Life Science and Health, Wuhan University of Science and Technology, Wuhan, China"],"raw_orcid":null,"affiliations":[{"raw_affiliation_string":"College of Life Science and Health, Wuhan University of Science and Technology, Wuhan, China","institution_ids":["https://openalex.org/I43922553"]}]}],"institutions":[],"countries_distinct_count":1,"institutions_distinct_count":2,"corresponding_author_ids":["https://openalex.org/A5012763020"],"corresponding_institution_ids":["https://openalex.org/I43922553"],"apc_list":{"value":4011,"currency":"USD","value_usd":4011},"apc_paid":null,"fwci":1.1949,"has_fulltext":false,"cited_by_count":17,"citation_normalized_percentile":{"value":0.76826182,"is_in_top_1_percent":false,"is_in_top_10_percent":false},"cited_by_percentile_year":{"min":90,"max":98},"biblio":{"volume":"22","issue":"3","first_page":null,"last_page":null},"is_retracted":false,"is_paratext":false,"is_xpac":false,"primary_topic":{"id":"https://openalex.org/T10515","display_name":"Cancer-related molecular mechanisms research","score":1.0,"subfield":{"id":"https://openalex.org/subfields/1306","display_name":"Cancer Research"},"field":{"id":"https://openalex.org/fields/13","display_name":"Biochemistry, Genetics and Molecular Biology"},"domain":{"id":"https://openalex.org/domains/1","display_name":"Life Sciences"}},"topics":[{"id":"https://openalex.org/T10515","display_name":"Cancer-related molecular mechanisms research","score":1.0,"subfield":{"id":"https://openalex.org/subfields/1306","display_name":"Cancer Research"},"field":{"id":"https://openalex.org/fields/13","display_name":"Biochemistry, Genetics and Molecular Biology"},"domain":{"id":"https://openalex.org/domains/1","display_name":"Life Sciences"}},{"id":"https://openalex.org/T11482","display_name":"RNA modifications and cancer","score":0.9573000073432922,"subfield":{"id":"https://openalex.org/subfields/1312","display_name":"Molecular Biology"},"field":{"id":"https://openalex.org/fields/13","display_name":"Biochemistry, Genetics and Molecular Biology"},"domain":{"id":"https://openalex.org/domains/1","display_name":"Life Sciences"}},{"id":"https://openalex.org/T10604","display_name":"RNA Research and Splicing","score":0.9387999773025513,"subfield":{"id":"https://openalex.org/subfields/1312","display_name":"Molecular Biology"},"field":{"id":"https://openalex.org/fields/13","display_name":"Biochemistry, Genetics and Molecular Biology"},"domain":{"id":"https://openalex.org/domains/1","display_name":"Life Sciences"}}],"keywords":[{"id":"https://openalex.org/keywords/ensembl","display_name":"Ensembl","score":0.6325944662094116},{"id":"https://openalex.org/keywords/cancer","display_name":"Cancer","score":0.5132953524589539},{"id":"https://openalex.org/keywords/intravasation","display_name":"Intravasation","score":0.5089511871337891},{"id":"https://openalex.org/keywords/long-non-coding-rna","display_name":"Long non-coding RNA","score":0.4444117248058319},{"id":"https://openalex.org/keywords/computational-biology","display_name":"Computational biology","score":0.38897815346717834},{"id":"https://openalex.org/keywords/computer-science","display_name":"Computer science","score":0.3716932535171509},{"id":"https://openalex.org/keywords/bioinformatics","display_name":"Bioinformatics","score":0.36661699414253235},{"id":"https://openalex.org/keywords/biology","display_name":"Biology","score":0.3487982749938965},{"id":"https://openalex.org/keywords/metastasis","display_name":"Metastasis","score":0.33616697788238525},{"id":"https://openalex.org/keywords/gene","display_name":"Gene","score":0.2469397783279419},{"id":"https://openalex.org/keywords/genomics","display_name":"Genomics","score":0.18470486998558044},{"id":"https://openalex.org/keywords/genetics","display_name":"Genetics","score":0.12915286421775818},{"id":"https://openalex.org/keywords/rna","display_name":"RNA","score":0.11088010668754578},{"id":"https://openalex.org/keywords/genome","display_name":"Genome","score":0.07217350602149963}],"concepts":[{"id":"https://openalex.org/C141674004","wikidata":"https://www.wikidata.org/wiki/Q1344256","display_name":"Ensembl","level":5,"score":0.6325944662094116},{"id":"https://openalex.org/C121608353","wikidata":"https://www.wikidata.org/wiki/Q12078","display_name":"Cancer","level":2,"score":0.5132953524589539},{"id":"https://openalex.org/C2778050619","wikidata":"https://www.wikidata.org/wiki/Q6058567","display_name":"Intravasation","level":4,"score":0.5089511871337891},{"id":"https://openalex.org/C62203573","wikidata":"https://www.wikidata.org/wiki/Q15087973","display_name":"Long non-coding RNA","level":4,"score":0.4444117248058319},{"id":"https://openalex.org/C70721500","wikidata":"https://www.wikidata.org/wiki/Q177005","display_name":"Computational biology","level":1,"score":0.38897815346717834},{"id":"https://openalex.org/C41008148","wikidata":"https://www.wikidata.org/wiki/Q21198","display_name":"Computer science","level":0,"score":0.3716932535171509},{"id":"https://openalex.org/C60644358","wikidata":"https://www.wikidata.org/wiki/Q128570","display_name":"Bioinformatics","level":1,"score":0.36661699414253235},{"id":"https://openalex.org/C86803240","wikidata":"https://www.wikidata.org/wiki/Q420","display_name":"Biology","level":0,"score":0.3487982749938965},{"id":"https://openalex.org/C2779013556","wikidata":"https://www.wikidata.org/wiki/Q181876","display_name":"Metastasis","level":3,"score":0.33616697788238525},{"id":"https://openalex.org/C104317684","wikidata":"https://www.wikidata.org/wiki/Q7187","display_name":"Gene","level":2,"score":0.2469397783279419},{"id":"https://openalex.org/C189206191","wikidata":"https://www.wikidata.org/wiki/Q222046","display_name":"Genomics","level":4,"score":0.18470486998558044},{"id":"https://openalex.org/C54355233","wikidata":"https://www.wikidata.org/wiki/Q7162","display_name":"Genetics","level":1,"score":0.12915286421775818},{"id":"https://openalex.org/C67705224","wikidata":"https://www.wikidata.org/wiki/Q11053","display_name":"RNA","level":3,"score":0.11088010668754578},{"id":"https://openalex.org/C141231307","wikidata":"https://www.wikidata.org/wiki/Q7020","display_name":"Genome","level":3,"score":0.07217350602149963}],"mesh":[{"descriptor_ui":"D006801","descriptor_name":"Humans","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D006801","descriptor_name":"Humans","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D006801","descriptor_name":"Humans","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D009362","descriptor_name":"Neoplasm Metastasis","qualifier_ui":"Q000235","qualifier_name":"genetics","is_major_topic":false},{"descriptor_ui":"D009362","descriptor_name":"Neoplasm Metastasis","qualifier_ui":"Q000235","qualifier_name":"genetics","is_major_topic":false},{"descriptor_ui":"D009362","descriptor_name":"Neoplasm Metastasis","qualifier_ui":"Q000235","qualifier_name":"genetics","is_major_topic":false},{"descriptor_ui":"D014584","descriptor_name":"User-Computer Interface","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D014584","descriptor_name":"User-Computer Interface","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D014584","descriptor_name":"User-Computer Interface","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D020407","descriptor_name":"Internet","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D020407","descriptor_name":"Internet","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D020407","descriptor_name":"Internet","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D030561","descriptor_name":"Databases, Nucleic Acid","qualifier_ui":null,"qualifier_name":null,"is_major_topic":true},{"descriptor_ui":"D030561","descriptor_name":"Databases, Nucleic Acid","qualifier_ui":null,"qualifier_name":null,"is_major_topic":true},{"descriptor_ui":"D030561","descriptor_name":"Databases, Nucleic Acid","qualifier_ui":null,"qualifier_name":null,"is_major_topic":true},{"descriptor_ui":"D062085","descriptor_name":"RNA, Long Noncoding","qualifier_ui":"Q000235","qualifier_name":"genetics","is_major_topic":false},{"descriptor_ui":"D062085","descriptor_name":"RNA, Long Noncoding","qualifier_ui":"Q000235","qualifier_name":"genetics","is_major_topic":false},{"descriptor_ui":"D062085","descriptor_name":"RNA, Long Noncoding","qualifier_ui":"Q000235","qualifier_name":"genetics","is_major_topic":false}],"locations_count":2,"locations":[{"id":"doi:10.1093/bib/bbaa178","is_oa":false,"landing_page_url":"https://doi.org/10.1093/bib/bbaa178","pdf_url":null,"source":{"id":"https://openalex.org/S91767247","display_name":"Briefings in Bioinformatics","issn_l":"1467-5463","issn":["1467-5463","1477-4054"],"is_oa":false,"is_in_doaj":true,"is_core":true,"host_organization":"https://openalex.org/P4310311648","host_organization_name":"Oxford University Press","host_organization_lineage":["https://openalex.org/P4310311648","https://openalex.org/P4310311647"],"host_organization_lineage_names":["Oxford University Press","University of Oxford"],"type":"journal"},"license":null,"license_id":null,"version":"publishedVersion","is_accepted":true,"is_published":true,"raw_source_name":"Briefings in Bioinformatics","raw_type":"journal-article"},{"id":"pmid:32766766","is_oa":false,"landing_page_url":"https://pubmed.ncbi.nlm.nih.gov/32766766","pdf_url":null,"source":{"id":"https://openalex.org/S4306525036","display_name":"PubMed","issn_l":null,"issn":null,"is_oa":false,"is_in_doaj":false,"is_core":false,"host_organization":"https://openalex.org/I1299303238","host_organization_name":"National Institutes of Health","host_organization_lineage":["https://openalex.org/I1299303238"],"host_organization_lineage_names":[],"type":"repository"},"license":null,"license_id":null,"version":"publishedVersion","is_accepted":true,"is_published":true,"raw_source_name":"Briefings in bioinformatics","raw_type":null}],"best_oa_location":null,"sustainable_development_goals":[{"score":0.7200000286102295,"id":"https://metadata.un.org/sdg/3","display_name":"Good health and well-being"}],"awards":[{"id":"https://openalex.org/G2235569614","display_name":"BRF1\u5728RNA\u805a\u5408\u9176I\u6307\u5bfc\u7684\u57fa\u56e0\u8f6c\u5f55\u4e2d\u7684\u4f5c\u7528\u53ca\u5176\u4f5c\u7528\u673a\u5236","funder_award_id":"31671357","funder_id":"https://openalex.org/F4320321001","funder_display_name":"National Natural Science Foundation of China"},{"id":"https://openalex.org/G445710957","display_name":null,"funder_award_id":"31301248","funder_id":"https://openalex.org/F4320321001","funder_display_name":"National Natural Science Foundation of China"}],"funders":[{"id":"https://openalex.org/F4320321001","display_name":"National Natural Science Foundation of China","ror":"https://ror.org/01h0zpd94"}],"has_content":{"grobid_xml":false,"pdf":false},"content_urls":null,"referenced_works_count":31,"referenced_works":["https://openalex.org/W117943783","https://openalex.org/W1976149758","https://openalex.org/W1985125414","https://openalex.org/W2000833392","https://openalex.org/W2002621804","https://openalex.org/W2023691360","https://openalex.org/W2032183472","https://openalex.org/W2039460588","https://openalex.org/W2057094700","https://openalex.org/W2080232352","https://openalex.org/W2095739285","https://openalex.org/W2113868616","https://openalex.org/W2114649195","https://openalex.org/W2127861583","https://openalex.org/W2128983843","https://openalex.org/W2142023052","https://openalex.org/W2144744111","https://openalex.org/W2153268494","https://openalex.org/W2165802491","https://openalex.org/W2284823004","https://openalex.org/W2555172741","https://openalex.org/W2586407709","https://openalex.org/W2735767394","https://openalex.org/W2767490405","https://openalex.org/W2911188335","https://openalex.org/W6646691820","https://openalex.org/W6683999456","https://openalex.org/W6737227568","https://openalex.org/W6745669244","https://openalex.org/W6806115372","https://openalex.org/W6813364610"],"related_works":["https://openalex.org/W2114906733","https://openalex.org/W4386771945","https://openalex.org/W2607145761","https://openalex.org/W191500217","https://openalex.org/W2321269194","https://openalex.org/W3017815076","https://openalex.org/W4318830437","https://openalex.org/W2359422034","https://openalex.org/W3118609871","https://openalex.org/W2342907344"],"abstract_inverted_index":{"Mounting":[0],"evidence":[1],"has":[2],"shown":[3],"the":[4,116,152],"involvement":[5],"of":[6,41,98,115,141],"long":[7],"non-coding":[8],"RNAs":[9],"(lncRNAs)":[10],"during":[11,75],"various":[12,76],"cancer":[13,20,94,149,187],"metastatic":[14],"events":[15],"(abbreviated":[16],"as":[17,172,174],"CMEs,":[18],"e.g.":[19],"cell":[21],"invasion,":[22],"intravasation,":[23],"extravasation,":[24],"proliferation,":[25],"etc.)":[26],"that":[27],"may":[28],"cooperatively":[29],"facilitate":[30],"malignant":[31],"tumor":[32],"spread":[33],"and":[34,51,59,88,128,151,170],"cause":[35],"massive":[36],"patient":[37],"deaths.":[38],"The":[39],"study":[40],"lncRNA-CME":[42,105,178],"associations":[43,84],"might":[44],"help":[45],"understand":[46],"lncRNA":[47,108,118,120,125,130,132,143],"functions":[48],"in":[49,161,186],"metastasis":[50],"present":[52],"reliable":[53],"biomarkers":[54],"for":[55,163],"early":[56],"dissemination":[57],"detection":[58,135],"optimized":[60],"treatment.":[61],"Therefore,":[62],"we":[63],"developed":[64],"a":[65,104,110,147,183],"database":[66],"named":[67],"'lncR2metasta'":[68],"by":[69],"manually":[70],"compiling":[71],"experimentally":[72],"supported":[73],"lncRNAs":[74,87],"CMEs":[77,90],"from":[78],"existing":[79],"studies.":[80],"LncR2metasta":[81,180],"documents":[82],"1238":[83],"between":[85],"304":[86],"39":[89],"across":[91],"54":[92],"human":[93],"subtypes.":[95],"Each":[96],"entry":[97],"lncR2metasta":[99,162],"contains":[100],"detailed":[101],"information":[102],"on":[103,146],"association,":[106,117],"including":[107],"symbol,":[109],"specific":[111],"CME,":[112,148],"brief":[113],"description":[114],"category,":[119],"Entrez":[121],"or":[122],"Ensembl":[123],"ID,":[124],"genomic":[126],"location":[127],"strand,":[129],"experiment,":[131],"expression":[133],"pattern,":[134],"method,":[136],"target":[137],"gene":[138],"(or":[139],"pathway)":[140],"lncRNA,":[142],"regulatory":[144],"role":[145],"name":[150],"literature":[153],"reference.":[154],"An":[155],"easy-to-use":[156],"web":[157],"interface":[158],"was":[159],"deployed":[160],"its":[164],"users":[165],"to":[166,175],"easily":[167],"browse,":[168],"search":[169],"download":[171],"well":[173],"submit":[176],"novel":[177],"associations.":[179],"will":[181],"be":[182],"useful":[184],"resource":[185],"research":[188],"community.":[189],"It":[190],"is":[191],"freely":[192],"available":[193],"at":[194],"http://lncR2metasta.wchoda.com.":[195]},"counts_by_year":[{"year":2025,"cited_by_count":1},{"year":2024,"cited_by_count":1},{"year":2023,"cited_by_count":5},{"year":2022,"cited_by_count":5},{"year":2021,"cited_by_count":5}],"updated_date":"2026-05-21T06:26:12.895304","created_date":"2025-10-10T00:00:00"}
