{"id":"https://openalex.org/W2525009737","doi":"https://doi.org/10.1090/dimacs/048/18","title":"DNA-based parallel computation by \"counting\"","display_name":"DNA-based parallel computation by \"counting\"","publication_year":1999,"publication_date":"1999-04-06","ids":{"openalex":"https://openalex.org/W2525009737","doi":"https://doi.org/10.1090/dimacs/048/18","mag":"2525009737"},"language":"en","primary_location":{"id":"doi:10.1090/dimacs/048/18","is_oa":false,"landing_page_url":"https://doi.org/10.1090/dimacs/048/18","pdf_url":null,"source":{"id":"https://openalex.org/S4210177973","display_name":"DIMACS series in discrete mathematics and theoretical computer science","issn_l":"1052-1798","issn":["1052-1798","2472-4793"],"is_oa":false,"is_in_doaj":false,"is_core":true,"host_organization":null,"host_organization_name":null,"host_organization_lineage":[],"host_organization_lineage_names":[],"type":"book series"},"license":null,"license_id":null,"version":"publishedVersion","is_accepted":true,"is_published":true,"raw_source_name":"DIMACS Series in Discrete Mathematics and Theoretical Computer Science","raw_type":"book-chapter"},"type":"book-chapter","indexed_in":["crossref"],"open_access":{"is_oa":false,"oa_status":"closed","oa_url":null,"any_repository_has_fulltext":false},"authorships":[{"author_position":"first","author":{"id":"https://openalex.org/A5019383096","display_name":"Mitsunori Ogihara","orcid":"https://orcid.org/0000-0002-5690-7854"},"institutions":[{"id":"https://openalex.org/I79576946","display_name":"University of Pennsylvania","ror":"https://ror.org/00b30xv10","country_code":"US","type":"education","lineage":["https://openalex.org/I79576946"]}],"countries":["US"],"is_corresponding":true,"raw_author_name":"Mitsunori Ogihara","raw_affiliation_strings":["University of Pennsylvania, Philadelphia, PA"],"affiliations":[{"raw_affiliation_string":"University of Pennsylvania, Philadelphia, PA","institution_ids":["https://openalex.org/I79576946"]}]},{"author_position":"last","author":{"id":"https://openalex.org/A5010142833","display_name":"Animesh Ray","orcid":"https://orcid.org/0000-0002-0120-5820"},"institutions":[{"id":"https://openalex.org/I86501945","display_name":"University of Delaware","ror":"https://ror.org/01sbq1a82","country_code":"US","type":"education","lineage":["https://openalex.org/I86501945"]}],"countries":["US"],"is_corresponding":false,"raw_author_name":"Animesh Ray","raw_affiliation_strings":["University of Delaware, Newark, DE"],"affiliations":[{"raw_affiliation_string":"University of Delaware, Newark, DE","institution_ids":["https://openalex.org/I86501945"]}]}],"institutions":[],"countries_distinct_count":1,"institutions_distinct_count":2,"corresponding_author_ids":["https://openalex.org/A5019383096"],"corresponding_institution_ids":["https://openalex.org/I79576946"],"apc_list":null,"apc_paid":null,"fwci":2.2675,"has_fulltext":false,"cited_by_count":11,"citation_normalized_percentile":{"value":0.89980592,"is_in_top_1_percent":false,"is_in_top_10_percent":false},"cited_by_percentile_year":null,"biblio":{"volume":null,"issue":null,"first_page":"255","last_page":"264"},"is_retracted":false,"is_paratext":false,"is_xpac":false,"primary_topic":{"id":"https://openalex.org/T12029","display_name":"DNA and Biological Computing","score":0.9998999834060669,"subfield":{"id":"https://openalex.org/subfields/1312","display_name":"Molecular Biology"},"field":{"id":"https://openalex.org/fields/13","display_name":"Biochemistry, Genetics and Molecular Biology"},"domain":{"id":"https://openalex.org/domains/1","display_name":"Life Sciences"}},"topics":[{"id":"https://openalex.org/T12029","display_name":"DNA and Biological Computing","score":0.9998999834060669,"subfield":{"id":"https://openalex.org/subfields/1312","display_name":"Molecular Biology"},"field":{"id":"https://openalex.org/fields/13","display_name":"Biochemistry, Genetics and Molecular Biology"},"domain":{"id":"https://openalex.org/domains/1","display_name":"Life Sciences"}},{"id":"https://openalex.org/T10207","display_name":"Advanced biosensing and bioanalysis techniques","score":0.9991999864578247,"subfield":{"id":"https://openalex.org/subfields/1312","display_name":"Molecular Biology"},"field":{"id":"https://openalex.org/fields/13","display_name":"Biochemistry, Genetics and Molecular Biology"},"domain":{"id":"https://openalex.org/domains/1","display_name":"Life Sciences"}},{"id":"https://openalex.org/T10432","display_name":"DNA and Nucleic Acid Chemistry","score":0.983299970626831,"subfield":{"id":"https://openalex.org/subfields/1312","display_name":"Molecular Biology"},"field":{"id":"https://openalex.org/fields/13","display_name":"Biochemistry, Genetics and Molecular Biology"},"domain":{"id":"https://openalex.org/domains/1","display_name":"Life Sciences"}}],"keywords":[{"id":"https://openalex.org/keywords/computation","display_name":"Computation","score":0.6620509028434753},{"id":"https://openalex.org/keywords/computer-science","display_name":"Computer science","score":0.5206927061080933},{"id":"https://openalex.org/keywords/parallel-computing","display_name":"Parallel computing","score":0.4531155824661255},{"id":"https://openalex.org/keywords/mathematics","display_name":"Mathematics","score":0.33450475335121155},{"id":"https://openalex.org/keywords/algorithm","display_name":"Algorithm","score":0.2354373335838318}],"concepts":[{"id":"https://openalex.org/C45374587","wikidata":"https://www.wikidata.org/wiki/Q12525525","display_name":"Computation","level":2,"score":0.6620509028434753},{"id":"https://openalex.org/C41008148","wikidata":"https://www.wikidata.org/wiki/Q21198","display_name":"Computer science","level":0,"score":0.5206927061080933},{"id":"https://openalex.org/C173608175","wikidata":"https://www.wikidata.org/wiki/Q232661","display_name":"Parallel computing","level":1,"score":0.4531155824661255},{"id":"https://openalex.org/C33923547","wikidata":"https://www.wikidata.org/wiki/Q395","display_name":"Mathematics","level":0,"score":0.33450475335121155},{"id":"https://openalex.org/C11413529","wikidata":"https://www.wikidata.org/wiki/Q8366","display_name":"Algorithm","level":1,"score":0.2354373335838318}],"mesh":[],"locations_count":1,"locations":[{"id":"doi:10.1090/dimacs/048/18","is_oa":false,"landing_page_url":"https://doi.org/10.1090/dimacs/048/18","pdf_url":null,"source":{"id":"https://openalex.org/S4210177973","display_name":"DIMACS series in discrete mathematics and theoretical computer science","issn_l":"1052-1798","issn":["1052-1798","2472-4793"],"is_oa":false,"is_in_doaj":false,"is_core":true,"host_organization":null,"host_organization_name":null,"host_organization_lineage":[],"host_organization_lineage_names":[],"type":"book series"},"license":null,"license_id":null,"version":"publishedVersion","is_accepted":true,"is_published":true,"raw_source_name":"DIMACS Series in Discrete Mathematics and Theoretical Computer Science","raw_type":"book-chapter"}],"best_oa_location":null,"sustainable_development_goals":[],"awards":[],"funders":[],"has_content":{"pdf":false,"grobid_xml":false},"content_urls":null,"referenced_works_count":0,"referenced_works":[],"related_works":["https://openalex.org/W2748952813","https://openalex.org/W1979597421","https://openalex.org/W2007980826","https://openalex.org/W4245490552","https://openalex.org/W4225152035","https://openalex.org/W2061531152","https://openalex.org/W3002753104","https://openalex.org/W2077600819","https://openalex.org/W1587224694","https://openalex.org/W2911598644"],"abstract_inverted_index":{"The":[0,51],"potential":[1],"of":[2,39,46,49,76,102,131],"DNA":[3,13,40,56,64,95,103],"as":[4],"a":[5,43,63,80],"truly":[6],"parallel":[7],"computing":[8,41],"device":[9],"is":[10,28,58,123],"enormous.":[11],"Solution-phase":[12],"chemistry,":[14],"though":[15],"not":[16],"unlimited,":[17],"provides":[18],"the":[19,35,47,89,94,99,110,121],"only":[20],"currently-available":[21],"experimental":[22],"system.":[23],"Its":[24],"practical":[25],"feasibility,":[26],"however,":[27],"controversial.":[29],"We":[30,61,71],"have":[31],"sought":[32],"to":[33,118,134],"extend":[34],"feasibility":[36],"and":[37],"generality":[38],"by":[42,79],"novel":[44,81],"application":[45],"theory":[48],"counting.":[50],"biochemically":[52],"equivalent":[53],"operation":[54],"for":[55,115],"counting":[57],"well":[59],"known.":[60],"propose":[62],"algorithm":[65,78,90,126],"that":[66,88,105],"employs":[67],"this":[68,77],"new":[69],"operation.":[70],"also":[72],"present":[73,108],"an":[74],"implementation":[75],"DNA-chemical":[82],"method.":[83],"Preliminary":[84],"computer":[85],"simulations":[86],"suggest":[87],"can":[91,127],"significantly":[92],"reduce":[93],"space":[96],"complexity":[97],"(i.e.,":[98],"maximum":[100],"number":[101],"molecules":[104],"must":[106],"be":[107],"in":[109],"test":[111],"tube":[112],"during":[113],"computation)":[114],"solving":[116],"3SAT":[117,129],"$O(2^{0.4n})$.":[119],"If":[120],"observation":[122],"correct,":[124],"our":[125],"solve":[128],"instances":[130],"size":[132],"up":[133],"or":[135],"exceeding":[136],"120":[137],"variables.":[138]},"counts_by_year":[],"updated_date":"2026-04-07T14:57:38.498316","created_date":"2025-10-10T00:00:00"}